comparison picard_SamToFastq.xml @ 19:5053a18d9bc8 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 7036343b9ac0a0ffc2ce4f6db465b9298ef05e73

18:7615ac66c6e5

<tool name="SamToFastq" id="picard_SamToFastq" version="@TOOL_VERSION@.0">
  <description>extract reads and qualities from SAM/BAM dataset and convert to fastq</description>
  <macros>
    <import>picard_macros.xml</import>
  </macros>
  <expand macro="requirements" />
  <command detect_errors="exit_code"><![CDATA[

    echo "BAM" > $report &&    ## This is necessary for output dataset detection (see output tags below)

                                Possible values: {true, false}

@more_info@

  </help>
</tool>

19:5053a18d9bc8

<tool name="SamToFastq" id="picard_SamToFastq" version="@TOOL_VERSION@.@WRAPPER_VERSION@">
  <description>extract reads and qualities from SAM/BAM dataset and convert to fastq</description>
  <macros>
    <import>picard_macros.xml</import>
    <token name="@WRAPPER_VERSION@">0</token>
  </macros>
  <expand macro="requirements" />
  <command detect_errors="exit_code"><![CDATA[

    echo "BAM" > $report &&    ## This is necessary for output dataset detection (see output tags below)

                                Possible values: {true, false}

@more_info@

  </help>
  <expand macro="citations" />
</tool>