Mercurial > repos > devteam > picard

diff picard_CollectRnaSeqMetrics.xml @ 20:2a17c789e0a5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 5ebd6c8453b49dd6a36e372eb1eb6e323bb7ad8a
author iuc
date Tue, 19 Jun 2018 11:28:49 -0400
parents 5053a18d9bc8
children f6ced08779c4
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line diff
--- a/picard_CollectRnaSeqMetrics.xml	Mon Apr 16 21:27:29 2018 -0400
+++ b/picard_CollectRnaSeqMetrics.xml	Tue Jun 19 11:28:49 2018 -0400
@@ -2,7 +2,7 @@
     <description> collect metrics about the alignment of RNA to various functional classes of loci in the genome</description>
     <macros>
         <import>picard_macros.xml</import>
-    <token name="@WRAPPER_VERSION@">0</token>
+    <token name="@WRAPPER_VERSION@">1</token>
     </macros>
     <expand macro="requirements">
         <requirement type="package" version="3.4.1">r-base</requirement>
@@ -59,7 +59,7 @@
       OUTPUT="${outFile}"
       REFERENCE_SEQUENCE="${reference_fasta_filename}"
       ASSUME_SORTED="${assume_sorted}"
-
+      @TMPDIR_OPTION@
       VALIDATION_STRINGENCY=${validation_stringency}
 
    ]]></command>