diff tool_dependencies.xml @ 4:ab1f60c26526 draft

Uploaded valid tools and complex repository dependency definition.

--- a/tool_dependencies.xml	Fri May 03 17:13:01 2013 -0400
+++ b/tool_dependencies.xml	Fri Feb 21 12:07:49 2014 -0500
@@ -1,19 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="picard" version="1.56.0">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://downloads.sourceforge.net/project/picard/picard-tools/1.56/picard-tools-1.56.zip</action>
-                <action type="move_directory_files">
-                    <source_directory>picard-tools-1.56</source_directory>
-                    <destination_directory>$INSTALL_DIR/jars</destination_directory>
-                </action>
-                <action type="set_environment">
-                    <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>
-        </readme>
+        <repository changeset_revision="61e41d21cb6f" name="package_picard_1_56_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>