comparison quality_filter.xml @ 2:6c6f15373f96 draft

Uploaded tool definition that handles error cases in a less pragmatic way.

1:64f5401327e8

  	#else
  		${mask_region.length}
	#end if
  	${GALAXY_DATA_INDEX_DIR}/quality_scores.loc
  </command>
  <stdio>
    <exit_code range="1:" level="fatal" description="Error" />
  </stdio>
  <inputs>
    <param format="maf" name="input" type="data" label="Select data"/>
    <param name="primary_species" type="select" label="Use quality scores of" display="checkboxes" multiple="true">
      <options>
        <filter type="data_meta" ref="input" key="species" />

2:6c6f15373f96

  	#else
  		${mask_region.length}
	#end if
  	${GALAXY_DATA_INDEX_DIR}/quality_scores.loc
  </command>
  <inputs>
    <param format="maf" name="input" type="data" label="Select data"/>
    <param name="primary_species" type="select" label="Use quality scores of" display="checkboxes" multiple="true">
      <options>
        <filter type="data_meta" ref="input" key="species" />