# HG changeset patch
# User devteam
# Date 1437507635 14400
# Node ID 2f4393f9f9129e9c3fb883ad4b801628e5c5f2d8
# Parent  6c6f15373f96dd90b97c4614c17dde0a8c106e96
planemo upload commit 00a7926c285bc4a339bd7deebf40b28f39c7d947

diff -r 6c6f15373f96 -r 2f4393f9f912 quality_filter.py
--- a/quality_filter.py	Mon Nov 03 17:29:20 2014 -0500
+++ b/quality_filter.py	Tue Jul 21 15:40:35 2015 -0400
@@ -20,6 +20,7 @@
 from bx.bitset import *
 from bx.bitset_builders import *
 from bx.cookbook import doc_optparse
+from galaxy.tools.exception_handling import *
 import bx.align.maf
 
 class FileBinnedArrayDir( DictMixin ):
diff -r 6c6f15373f96 -r 2f4393f9f912 tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Nov 03 17:29:20 2014 -0500
+++ b/tool_dependencies.xml	Tue Jul 21 15:40:35 2015 -0400
@@ -1,9 +1,9 @@
 <?xml version="1.0"?>
 <tool_dependency>
   <package name="bx-python" version="0.7.1">
-      <repository changeset_revision="41eb9d9f667d" name="package_bx_python_0_7" owner="devteam" prior_installation_required="False" toolshed="http://toolshed.g2.bx.psu.edu" />
+      <repository changeset_revision="2d0c08728bca" name="package_bx_python_0_7" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="numpy" version="1.7.1">
-      <repository changeset_revision="0c288abd2a1e" name="package_numpy_1_7" owner="devteam" prior_installation_required="False" toolshed="http://toolshed.g2.bx.psu.edu" />
+      <repository changeset_revision="0c288abd2a1e" name="package_numpy_1_7" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>