Mercurial > repos > devteam > rmapq
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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/rmapq commit a1517c9d22029095120643bbe2c8fa53754dd2b7
author | devteam |
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date | Wed, 11 Nov 2015 12:25:20 -0500 |
parents | f6e5bb5aa2f5 |
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#This is a sample file distributed with Galaxy that enables tools #to use genome fasta sequence files. The faseq.loc file has this format #(white space characters are TAB characters): # # <GenomeBuild> <dir> # # In the dir, each file is fasta format and contains only one sequence. So, #for example, if you had hg18 fasta sequences stored in /depot/data2/galaxy/faseq/hg18, #then your faseq.loc entry would look like this: # #hg18 /depot/data2/galaxy/faseq/hg18 # #and your /depot/data2/galaxy/faseq/hg18 directory would contain all of #your fasta sequence files (e.g.): # #-rw-r--r-- 1 wychung galaxy 138082251 2008-04-16 11:57 chr10.fa #-rw-r--r-- 1 wychung galaxy 115564 2008-04-16 11:57 chr10_random.fa #-rw-r--r-- 1 wychung galaxy 137141451 2008-04-16 11:58 chr11.fa #...etc... #Your faseq.loc file should include an entry per line for each set of fasta #sequence files you have stored. For example: # #hg18 /depot/data2/galaxy/faseq/hg18 #mm9 /depot/data2/galaxy/faseq/mm9 #Arabidopsis /depot/data2/galaxy/faseq/Arabidopsis #...etc...