# HG changeset patch
# User devteam
# Date 1377541272 14400
# Node ID 95612c1596813ca21f5d459af8c85e2eb5cf91a6

Uploaded tool tarball.

diff -r 000000000000 -r 95612c159681 sam_pileup.py
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/sam_pileup.py	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,163 @@
+#!/usr/bin/env python
+
+"""
+Creates a pileup file from a bam file and a reference.
+
+usage: %prog [options]
+   -p, --input1=p: bam file
+   -o, --output1=o: Output pileup
+   -R, --ref=R: Reference file type
+   -n, --ownFile=n: User-supplied fasta reference file
+   -d, --dbkey=d: dbkey of user-supplied file
+   -x, --indexDir=x: Index directory
+   -b, --bamIndex=b: BAM index file
+   -s, --lastCol=s: Print the mapping quality as the last column
+   -i, --indels=i: Only output lines containing indels
+   -M, --mapCap=M: Cap mapping quality
+   -c, --consensus=c: Call the consensus sequence using MAQ consensu model
+   -T, --theta=T: Theta paramter (error dependency coefficient)
+   -N, --hapNum=N: Number of haplotypes in sample
+   -r, --fraction=r: Expected fraction of differences between a pair of haplotypes
+   -I, --phredProb=I: Phred probability of an indel in sequencing/prep
+
+"""
+
+import os, shutil, subprocess, sys, tempfile
+from galaxy import eggs
+import pkg_resources; pkg_resources.require( "bx-python" )
+from bx.cookbook import doc_optparse
+
+def stop_err( msg ):
+    sys.stderr.write( '%s\n' % msg )
+    sys.exit()
+
+def check_seq_file( dbkey, GALAXY_DATA_INDEX_DIR ):
+    seqFile = '%s/sam_fa_indices.loc' % GALAXY_DATA_INDEX_DIR
+    seqPath = ''
+    for line in open( seqFile ):
+        line = line.rstrip( '\r\n' )
+        if line and not line.startswith( '#' ) and line.startswith( 'index' ):
+            fields = line.split( '\t' )
+            if len( fields ) < 3:
+                continue
+            if fields[1] == dbkey:
+                seqPath = fields[2].strip()
+                break
+    return seqPath
+
+def __main__():
+    #Parse Command Line
+    options, args = doc_optparse.parse( __doc__ )
+    seqPath = check_seq_file( options.dbkey, options.indexDir )
+    # output version # of tool
+    try:
+        tmp = tempfile.NamedTemporaryFile().name
+        tmp_stdout = open( tmp, 'wb' )
+        proc = subprocess.Popen( args='samtools 2>&1', shell=True, stdout=tmp_stdout )
+        tmp_stdout.close()
+        returncode = proc.wait()
+        stdout = None
+        for line in open( tmp_stdout.name, 'rb' ):
+            if line.lower().find( 'version' ) >= 0:
+                stdout = line.strip()
+                break
+        if stdout:
+            sys.stdout.write( 'Samtools %s\n' % stdout )
+        else:
+            raise Exception
+    except:
+        sys.stdout.write( 'Could not determine Samtools version\n' )
+    #prepare file names 
+    tmpDir = tempfile.mkdtemp()
+    tmpf0 = tempfile.NamedTemporaryFile( dir=tmpDir )
+    tmpf0_name = tmpf0.name
+    tmpf0.close()
+    tmpf0bam_name = '%s.bam' % tmpf0_name
+    tmpf0bambai_name = '%s.bam.bai' % tmpf0_name
+    tmpf1 = tempfile.NamedTemporaryFile( dir=tmpDir )
+    tmpf1_name = tmpf1.name
+    tmpf1.close()
+    tmpf1fai_name = '%s.fai' % tmpf1_name
+    #link bam and bam index to working directory (can't move because need to leave original)
+    os.symlink( options.input1, tmpf0bam_name )
+    os.symlink( options.bamIndex, tmpf0bambai_name )
+    #get parameters for pileup command
+    if options.lastCol == 'yes':
+        lastCol = '-s'
+    else:
+        lastCol = ''
+    if options.indels == 'yes':
+        indels = '-i'
+    else:
+        indels = ''
+    opts = '%s %s -M %s' % ( lastCol, indels, options.mapCap )
+    if options.consensus == 'yes':
+        opts += ' -c -T %s -N %s -r %s -I %s' % ( options.theta, options.hapNum, options.fraction, options.phredProb )
+    #prepare basic pileup command
+    cmd = 'samtools pileup %s -f %s %s > %s'
+    try:
+        # have to nest try-except in try-finally to handle 2.4
+        try:
+            #index reference if necessary and prepare pileup command
+            if options.ref == 'indexed':
+                if not os.path.exists( "%s.fai" % seqPath ):
+                    raise Exception, "No sequences are available for '%s', request them by reporting this error." % options.dbkey
+                cmd = cmd % ( opts, seqPath, tmpf0bam_name, options.output1 )
+            elif options.ref == 'history':
+                os.symlink( options.ownFile, tmpf1_name )
+                cmdIndex = 'samtools faidx %s' % ( tmpf1_name )
+                tmp = tempfile.NamedTemporaryFile( dir=tmpDir ).name
+                tmp_stderr = open( tmp, 'wb' )
+                proc = subprocess.Popen( args=cmdIndex, shell=True, cwd=tmpDir, stderr=tmp_stderr.fileno() )
+                returncode = proc.wait()
+                tmp_stderr.close()
+                # get stderr, allowing for case where it's very large
+                tmp_stderr = open( tmp, 'rb' )
+                stderr = ''
+                buffsize = 1048576
+                try:
+                    while True:
+                        stderr += tmp_stderr.read( buffsize )
+                        if not stderr or len( stderr ) % buffsize != 0:
+                            break
+                except OverflowError:
+                    pass
+                tmp_stderr.close()
+                #did index succeed?
+                if returncode != 0:
+                    raise Exception, 'Error creating index file\n' + stderr
+                cmd = cmd % ( opts, tmpf1_name, tmpf0bam_name, options.output1 )
+            #perform pileup command
+            tmp = tempfile.NamedTemporaryFile( dir=tmpDir ).name
+            tmp_stderr = open( tmp, 'wb' )
+            proc = subprocess.Popen( args=cmd, shell=True, cwd=tmpDir, stderr=tmp_stderr.fileno() )
+            returncode = proc.wait()
+            tmp_stderr.close()
+            #did it succeed?
+            # get stderr, allowing for case where it's very large
+            tmp_stderr = open( tmp, 'rb' )
+            stderr = ''
+            buffsize = 1048576
+            try:
+                while True:
+                    stderr += tmp_stderr.read( buffsize )
+                    if not stderr or len( stderr ) % buffsize != 0:
+                        break
+            except OverflowError:
+                pass
+            tmp_stderr.close()
+            if returncode != 0:
+                raise Exception, stderr
+        except Exception, e:
+            stop_err( 'Error running Samtools pileup tool\n' + str( e ) )
+    finally:
+        #clean up temp files
+        if os.path.exists( tmpDir ):
+            shutil.rmtree( tmpDir )
+    # check that there are results in the output file
+    if os.path.getsize( options.output1 ) > 0:
+        sys.stdout.write( 'Converted BAM to pileup' )
+    else:
+        stop_err( 'The output file is empty. Your input file may have had no matches, or there may be an error with your input file or settings.' )
+
+if __name__ == "__main__" : __main__()
diff -r 000000000000 -r 95612c159681 sam_pileup.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/sam_pileup.xml	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,190 @@
+<tool id="sam_pileup" name="Generate pileup" version="1.1.1">
+  <description>from BAM dataset</description>
+  <requirements>
+    <requirement type="package" version="0.1.16">samtools</requirement>
+  </requirements>
+  <command interpreter="python">
+    sam_pileup.py
+      --input1=$input1
+      --output=$output1
+      --ref=$refOrHistory.reference
+      #if $refOrHistory.reference == "history":
+        --ownFile=$refOrHistory.ownFile
+      #else:
+        --ownFile="None"
+      #end if
+       --dbkey=${input1.metadata.dbkey}
+       --indexDir=${GALAXY_DATA_INDEX_DIR}
+       --bamIndex=${input1.metadata.bam_index}
+       --lastCol=$lastCol
+       --indels=$indels
+       --mapCap=$mapCap
+       --consensus=$c.consensus
+      #if $c.consensus == "yes":
+        --theta=$c.theta
+        --hapNum=$c.hapNum
+        --fraction=$c.fraction
+        --phredProb=$c.phredProb
+       #else:
+        --theta="None"
+        --hapNum="None"
+        --fraction="None"
+        --phredProb="None"
+      #end if
+  </command>
+  <inputs>
+    <conditional name="refOrHistory">
+      <param name="reference" type="select" label="Will you select a reference genome from your history or use a built-in index?">
+        <option value="indexed">Use a built-in index</option>
+        <option value="history">Use one from the history</option>
+      </param>
+      <when value="indexed">
+        <param name="input1" type="data" format="bam" label="Select the BAM file to generate the pileup file for">
+           <validator type="unspecified_build" />
+           <validator type="dataset_metadata_in_file" filename="sam_fa_indices.loc" metadata_name="dbkey" metadata_column="1" message="Sequences are not currently available for the specified build." line_startswith="index" />
+        </param>
+      </when>
+      <when value="history">
+        <param name="input1" type="data" format="bam" label="Select the BAM file to generate the pileup file for" />
+        <param name="ownFile" type="data" format="fasta" metadata_name="dbkey" label="Select a reference genome" />
+      </when>
+    </conditional>
+    <param name="lastCol" type="select" label="Whether or not to print the mapping quality as the last column" help="Makes the output easier to parse, but is space inefficient">
+      <option value="no">Do not print the mapping quality as the last column</option>
+      <option value="yes">Print the mapping quality as the last column</option>
+    </param>
+    <param name="indels" type="select" label="Whether or not to print only output pileup lines containing indels">
+      <option value="no">Print all lines</option>
+      <option value="yes">Print only lines containing indels</option>
+    </param>
+    <param name="mapCap" type="integer" value="60" label="Where to cap mapping quality" />
+    <conditional name="c">
+      <param name="consensus" type="select" label="Call consensus according to MAQ model?">
+        <option selected="true" value="no">No</option>
+        <option value="yes">Yes</option>
+      </param> 
+      <when value="no" />
+      <when value="yes">
+        <param name="theta" type="float" value="0.85" label="Theta parameter (error dependency coefficient) in the MAQ consensus calling model" />
+        <param name="hapNum" type="integer" value="2" label="Number of haplotypes in the sample" help="Greater than or equal to 2" />
+        <param name="fraction" type="float" value="0.001" label="Expected fraction of differences between a pair of haplotypes" />
+        <param name="phredProb" type="integer" value="40" label="Phred probability of an indel in sequencing/prep" />
+      </when>
+    </conditional>
+  </inputs>
+  <outputs>
+    <data format="tabular" name="output1" label="${tool.name} on ${on_string}: converted pileup" />
+  </outputs>
+  <tests>
+    <test>
+      <!--
+      Bam to pileup command:
+      samtools faidx chr_m.fasta
+      samtools pileup -M 60 -f chr_m.fasta test-data/sam_pileup_in1.bam > sam_pileup_out1.pileup
+      chr_m.fasta is the prefix of the index
+      -->
+      <param name="reference" value="history" />
+      <param name="input1" value="sam_pileup_in1.bam" ftype="bam" />
+      <param name="ownFile" value="chr_m.fasta" ftype="fasta" dbkey="equCab2" />
+      <param name="lastCol" value="no" />
+      <param name="indels" value="no" />
+      <param name="mapCap" value="60" />
+      <param name="consensus" value="no" />
+      <output name="output1" file="sam_pileup_out1.pileup" />
+    </test>
+    <test>
+      <!--
+      Bam to pileup command:
+      samtools pileup -M 60 -c -T 0.85 -N 2 -r 0.001 -I 40 -f chr_m.fasta test-data/sam_pileup_in1.bam > sam_pileup_out2.pileup
+      chr_m.fasta is the prefix of the index
+      -->
+      <param name="reference" value="indexed" />
+      <param name="input1" value="sam_pileup_in1.bam" ftype="bam" dbkey="equCab2" />
+      <param name="lastCol" value="no" />
+      <param name="indels" value="no" />
+      <param name="mapCap" value="60" />
+      <param name="consensus" value="yes" />
+      <param name="theta" value="0.85" />
+      <param name="hapNum" value="2" />
+      <param name="fraction" value="0.001" />
+      <param name="phredProb" value="40" />
+      <output name="output1" file="sam_pileup_out2.pileup" />
+    </test>
+  </tests>
+  <help>
+
+**What it does**
+
+Uses SAMTools_' pileup command to produce a pileup dataset from a provided BAM dataset. It generates two types of pileup datasets depending on the specified options. If *Call consensus according to MAQ model?* option is set to **No**, the tool produces simple pileup. If the option is set to **Yes**, a ten column pileup dataset with consensus is generated. Both types of datasets are briefly summarized below.
+
+.. _SAMTools: http://samtools.sourceforge.net/samtools.shtml
+
+------
+
+**Types of pileup datasets**
+
+The description of pileup format below is largely based on information that can be found on SAMTools Pileup_ documentation page. The 6- and 10-column variants are described below.
+
+.. _Pileup: http://samtools.sourceforge.net/pileup.shtml
+
+**Six column pileup**::
+
+    1    2  3  4        5        6
+ ---------------------------------
+ chrM  412  A  2       .,       II
+ chrM  413  G  4     ..t,     IIIH
+ chrM  414  C  4     ...a     III2
+ chrM  415  C  4     TTTt     III7
+   
+where::
+
+  Column Definition
+ ------- ----------------------------
+       1 Chromosome
+       2 Position (1-based)
+       3 Reference base at that position
+       4 Coverage (# reads aligning over that position)
+       5 Bases within reads where (see Galaxy wiki for more info)
+       6 Quality values (phred33 scale, see Galaxy wiki for more)
+       
+**Ten column pileup**
+
+The `ten-column` (consensus_) pileup incorporates additional consensus information generated with *-c* option of *samtools pileup* command::
+
+
+    1    2  3  4   5   6   7   8       9       10
+ ------------------------------------------------
+ chrM  412  A  A  75   0  25  2       .,       II
+ chrM  413  G  G  72   0  25  4     ..t,     IIIH
+ chrM  414  C  C  75   0  25  4     ...a     III2
+ chrM  415  C  T  75  75  25  4     TTTt     III7
+
+where::
+
+  Column Definition
+ ------- --------------------------------------------------------
+       1 Chromosome
+       2 Position (1-based)
+       3 Reference base at that position
+       4 Consensus bases
+       5 Consensus quality
+       6 SNP quality
+       7 Maximum mapping quality
+       8 Coverage (# reads aligning over that position)
+       9 Bases within reads where (see Galaxy wiki for more info)
+      10 Quality values (phred33 scale, see Galaxy wiki for more)
+
+
+.. _consensus: http://samtools.sourceforge.net/cns0.shtml
+
+------
+
+**Citation**
+
+For the underlying tool, please cite `Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R; 1000 Genome Project Data Processing Subgroup. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009 Aug 15;25(16):2078-9. &lt;http://www.ncbi.nlm.nih.gov/pubmed/19505943&gt;`_
+
+
+  </help>
+</tool>
+
+
diff -r 000000000000 -r 95612c159681 test-data/chr_m.fasta
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/chr_m.fasta	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,335 @@
+>chrM
+GTTAATGTAGCTTAATAATATAAAGCAAGGCACTGAAAATGCCTAGATGA
+GTATTCTTACTCCATAAACACATAGGCTTGGTCCTAGCCTTTTTATTAGT
+TATTAATAGAATTACACATGCAAGTATCCGCACCCCAGTGAGAATGCCCT
+CTAAATCACGTCTCTACGATTAAAAGGAGCAGGTATCAAGCACACTAGAA
+AGTAGCTCATAACACCTTGCTCAGCCACACCCCCACGGGACACAGCAGTG
+ATAAAAATTAAGCTATGAACGAAAGTTCGACTAAGTCATATTAAATAAGG
+GTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTA
+ATAAATCTCCGGCGTAAAGCGTGTCAAAGACTAATACCAAAATAAAGTTA
+AAACCCAGTTAAGCCGTAAAAAGCTACAACCAAAGTAAAATAGACTACGA
+AAGTGACTTTAATACCTCTGACTACACGATAGCTAAGACCCAAACTGGGA
+TTAGATACCCCACTATGCTTAGCCCTAAACTAAAATAGCTTACCACAACA
+AAGCTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCAAAGGACTT
+GGCGGTGCTTTACATCCCTCTAGAGGAGCCTGTTCCATAATCGATAAACC
+CCGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTT
+CAGCAAACCCTAAACAAGGTACCGAAGTAAGCACAAATATCCAACATAAA
+AACGTTAGGTCAAGGTGTAGCCCATGGGATGGAGAGAAATGGGCTACATT
+TTCTACCCTAAGAACAAGAACTTTAACCCGGACGAAAGTCTCCATGAAAC
+TGGAGACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGAGAGCTTAATT
+GAATCAGGCCATGAAGCGCGCACACACCGCCCGTCACCCTCCTTAAATAT
+CACAAATCATAACATAACATAAAACCGTGACCCAAACATATGAAAGGAGA
+CAAGTCGTAACAAGGTAAGTATACCGGAAGGTGTACTTGGATAACCAAAG
+TGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGATTTCACTCAAAA
+TGAACACTTTGAACTAAAGCTAGCCCAAACAATACCTAATTCAATTACCC
+TTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGATAG
+AAATTTTAACTTGGCGCTATAGAGAAAGTACCGTAAGGGAACGATGAAAG
+ATGCATTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCAT
+AATGATTTAACTAGAATAAACTTAGCAAAGAGAACTTAAGCTAAGCACCC
+CGAAACCAGACGAGCTACCTATGAACAGTTACAAATGAACCAACTCATCT
+ATGTCGCAAAATAGTGAGAAGATTCGTAGGTAGAGGTGAAAAGCCCAACG
+AGCCTGGTGATAGCTGGTTGTCCAGAAACAGAATTTCAGTTCAAATTTAA
+ATTTACCTAAAAACTACTCAATTCTAATGTAAATTTAAATTATAGTCTAA
+AAAGGTACAGCTTTTTAGATACAGGTTACAACCTTCATTAGAGAGTAAGA
+ACAAGATAAACCCATAGTTGGCTTAAAAGCAGCCATCAATTAAGAAAGCG
+TTCAAGCTCAACGACACATCTATCTTAATCCCAACAATCAACCCAAACTA
+ACTCCTAATCTCATACTGGACTATTCTATCAACACATAGAAGCAATAATG
+TTAATATGAGTAACAAGAATTATTTCTCCTTGCATAAGCTTATATCAGAA
+CGAATACTCACTGATAGTTAACAACAAGATAGGGATAATCCAAAAACTAA
+TCATCTATTTAAACCATTGTTAACCCAACACAGGCATGCATCTATAAGGA
+AAGATTAAAAGAAGTAAAAGGAACTCGGCAAACACAAACCCCGCCTGTTT
+ACCAAAAACATCACCTCTAGCATTTCCAGTATTAGAGGCACTGCCTGCCC
+AGTGACATCTGTTtaaacggccgcggtatcctaaccgtgcaaaggtagca
+taatcacttgttccctaaatagggacttgtatgaatggccacacgagggt
+tttactgtctcttacttccaatcagtgaaattgaccttcccgtgaagagg
+cgggaatgactaaataagacgagaagaccctatggagcttTAATTAACTG
+ATTCACAAAAAACAACACACAAACCTTAACCTTCAGGGACAACAAAACTT
+TTGATTGAATCAGCAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAAC
+CTCCGAGTGATTTAAATCCAGACTAACCAGTCAAAATATATAATCACTTA
+TTGATCCAAACCATTGATCAACGGAACAAGTTACCCTAGGGATAACAGCG
+CAATCCTATTCCAGAGTCCATATCGACAATTAGGGTTTACGACCTCGATG
+TTGGATCAAGACATCCTAATGGTGCAACCGCTATTAAGGGTTCGTTTGTT
+CAACGATTAAAGTCTTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGT
+CGGTTTCTATCTATTCTATACTTTTCCCAGTACGAAAGGACAAGAAAAGT
+AGGGCCCACTTTACAAGAAGCGCCCTCAAACTAATAGATGACATAATCTA
+AATCTAACTAATTTATAACTTCTACCGCCCTAGAACAGGGCTCgttaggg
+tggcagagcccggaaattgcataaaacttaaacctttacactcagaggtt
+caactcctctccctaacaacaTGTTCATAATTAACGTCCTCCTCCTAATT
+GTCCCAATCTTGCTCGCCGTAGCATTCCTCACACTAGTTGAACGAAAAGT
+CTTAGGCTATATGCAACTTCGCAAAGGACCCAACATCGTAGGCCCCTATG
+GCCTACTACAACCTATTGCCGATGCCCTCAAACTATTTATCAAAGAGCCA
+CTACAACCACTAACATCATCGACATCCATATTCATCATCGCACCAATCCT
+AGCCCTAACCCTGGCCTTAACCATATGAATCCCTCTGCCCATACCATACC
+CACTAATCAACATAAACCTAGGAATTCTATTCATACTAGCCATGTCCAGC
+CTAGCTGTCTACTCAATCCTTTGATCAGGATGGGCCTCAAACTCAAAATA
+CGCCCTAATTGGAGCTCTACGAGCAGTAGCACAAACCATCTCATACGAAG
+TAACTCTAGCAATCATCCTACTCTCAGTCCTCCTAATAAGCGGATCATTC
+ACATTATCAACACTTATTATTACCCAAGAATACCTCTGATTAATCTTCCC
+ATCATGACCCTTAGCCATAATGTGATTCATCTCAACATTAGCCGAAACCA
+ACCGAGCTCCATTTGACCTAACAGAAGGAGAATCAGAACTCGTCTCTGGA
+TTCAACGTTGAATACGCAGCCGGCCCATTTGCTCTATTCTTCCTAGCAGA
+ATACGCAAACATCATCATGATAAACATCTTCACAACAACCCTATTTCTAG
+GAGCATTTCACAACCCCTACCTGCCAGAACTCTACTCAATTAATTTCACC
+ATTAAAGCTCTCCTTCTAACATGTTCCTTCCTATGAATCCGAGCATCCTA
+CCCACGATTCCGATATGACCAACTTATACACCTCCTATGAAAGAACTTCC
+TACCACTCACACTAGCCCTCTGCATATGACACGTCTCACTTCCAATCATA
+CTATCCAGCATCCCACCACAAACATAGGAAATATGTCTGACAAAAGAGTT
+ACTTTGATAGAGTAAAACATAGAGGCTCAAACCCTCTTATTTctagaact
+acaggaattgaacctgctcctgagaattcaaaatcctccgtgctaccgaa
+ttacaccatgtcctaCAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCAT
+ACCCCGAAAATGTTGGATTACACCCTTCCCGTACTAATAAATCCCCTTAT
+CTTCACAACTATTCTAATAACAGTTCTTCTAGGAACTATAATCGTTATAA
+TAAGCTCACACTGACTAATAATCTGAATCGGATTTGAAATAAATCTACTA
+GCCATTATCCCTATCCTAATAAAAAAGTACAATCCCCGAACCATAGAAGC
+CTCCACCAAATATTTTCTAACCCAAGCCACCGCATCAATACTCCTCATAA
+TAGCGATCATCATTAACCTCATACACTCAGGCCAATGAACAATCACAAAA
+GTCTTCAACCCCACAGCGTCCATCATTATAACTTCAGCTCTCGCCATAAA
+ACTTGGACTCACACCATTCCACTTCTGAGTACCCGAAGTCACACAGGGCA
+TCTCATTAACATCAGGTCTCATCCTACTTACATGACAAAAACTAGCCCCA
+ATATCAATCCTATATCAAATCTCACCCTCAATTAACCTAAATATCTTATT
+AACTATAGCCGTACTGTCAATCCTAGTAGGAGGCTGAGGCGGTCTCAACC
+AAACCCAACTACGAAAAATCATAGCATACTCGTCAATCGCGCATATAGGA
+TGAATAACAGCTGTCCTAGTATATAACCCAACACTAACAATACTAAACAT
+ATTAATTTACATTATAATAACACTCACAATATTCATACTATTTATCCACA
+GCTCCTCTACTACAACACTATCACTCTCCCACACATGAAACAAAATACCT
+CTAACCACTACACTAATCTTAATTACCTTACTATCCATAGGAGGCCTCCC
+CCCACTATCAGGATTCATACCCAAATGAATAATCATTCAAGAGCTCACCA
+AAAATAGCAGCATCATCCTCCCCACACTAATAGCCATTATAGCACTACTC
+AACCTCTACTTCTACATACGACTAACCTATTCCACCTCACTGACCATATT
+CCCATCCACAAACAACATAAAAATAAAATGACAATTCGAAACCAAACGAA
+TTACTCTCTTACCCCCGTTAATTGTTATATCCTCCCTACTCCTCCCCCTA
+ACCCCCATACTATCAATTTTGGACTAGGAATTTAGGTTAACATCCCAGAC
+CAAGAGCCTTCAAAGCTCTAAGCAAGTGAATCCACTTAATTCCTGCATAC
+TAAGGACTGCGAGACTCTATCTCACATCAATTGAACGCAAATCAAACTCT
+TTTATTAAGCTAAGCCCTTACTAGATTGGTGGGCTACCATCCCACGAAAT
+TTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCTCC
+CGCCGCCTAGAAAAAAAGGCGGGAGAAGCCCCGGCAGAAATTGAAGCTGC
+TCCTTTGAATTTGCAATTCAATGTGAAAATTCACCACGGGACTTGATAAG
+AAGAGGATTCCAACCCCTGTCTTTAGATTTACAGTCTAATGCTTACTCAG
+CCATCTTACCTATGTTCATCAACCGCTGACTATTTTCAACTAACCACAAA
+GACATCGGCACTCTGTACCTCCTATTCGGCGCTTGAGCTGGAATAGTAGG
+AACTGCCCTAAGCCTCCTAATCCGTGCTGAATTAGGCCAACCTGGGACCC
+TACTAGGAGATGATCAGATCTACAATGTCATTGTAACCGCCCATGCATTC
+GTAATAATTTTCTTTATGGTCATACCCATTATAATCGGAGGATTCGGAAA
+CTGATTAGTCCCCCTGATAATTGGAGCACCTGATATAGCTTTCCCCCGAA
+TAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACTTCTTCTC
+GCTTCCTCAATAATTGAAGCAGGTGCCGGAACAGGCTGAACCGTATATCC
+TCCTCTAGCTGGAAATCTGGCGCATGCAGGAGCCTCTGTTGACTTAACCA
+TTTTCTCTCTCCACCTAGCTGGGGTGTCCTCGATTTTAGGTGCCATCAAC
+TTTATTACCACAATCATTAACATAAAACCACCAGCCCTATCCCAATATCA
+AACCCCCCTATTCGTTTGATCTGTCCTTATTACGGCAGTACTCCTTCTCC
+TAGCCCTCCCGGTCCTAGCAGCAGGCATTACCATGCTTCTCACAGACCGT
+AACCTGAACACTACTTTCTTCGACCCCGCAGGAGGAGGGGATCCAATCCT
+TTATCAACACCTATTCTGATTCTTCGGACACCCCGAAGTCTATATTCTTA
+TCCTACCAGGCTTCGGTATAATCTCACACATCGTCACATACTACTCAGGT
+AAAAAGGAACCTTTTGGCTACATGGGTATAGTGTGAGCTATAATATCCAT
+TGGCTTTCTAGGCTTCATCGTATGGGCTCACCACATGTTTACAGTAGGGA
+TAGACGTTGACACACGAGCATACTTCACATCAGCTACCATAATCATCGCT
+ATCCCTACTGGTGTAAAAGTATTCAGCTGACTAGCCACCCTGCACGGAGG
+AAATATCAAATGATCTCCAGCTATACTCTGAGCTCTAGGCTTCATCTTCT
+TATTCACAGTAGGAGGTCTAACAGGAATCGTCCTAGCTAACTCATCCCTA
+GATATTGTTCTCCACGATACTTATTATGTAGTAGCACATTTCCATTATGT
+CCTGTCTATAGGAGCAGTCTTCGCCATTATGGGGGGATTTGTACACTGAT
+TCCCTCTATTCTCAGGATACACACTCAACCAAACCTGAGCAAAAATCCAC
+TTTACAATTATATTCGTAGGGGTAAATATAACCTTCTTCCCACAACATTT
+CCTTGGCCTCTCAGGAATGCCACGACGCTATTCTGATTATCCAGACGCAT
+ATACAACATGAAATACCATCTCATCCATAGGATCTTTTATCTCACTTACA
+GCAGTGATACTAATAATTTTCATAATTTGAGAAGCGTTCGCATCCAAACG
+AGAAGTGTCTACAGTAGAATTAACCTCAACTAATCTGGAATGACTACACG
+GATGCCCCCCACCATACCACACATTTGAAGAACCCACCTACGTAAACCTA
+AAAtaagaaaggaaggaatcgaaccccctctaactggtttcaagccaata
+tcataaccactatgtctttctcCATCAATTGAGGTATTAGTAAAAATTAC
+ATGACTTTGTCAAAGTTAAATTATAGGTTAAACCCCTATATACCTCTATG
+GCCTACCCCTTCCAACTAGGATTCCAAGACGCAACATCCCCTATTATAGA
+AGAACTCCTACACTTCCACGACCACACACTAATAATCGTATTCCTAATTA
+GCTCTCTAGTATTATATATTATCTCATCAATACTAACAACTAAATTAACC
+CATACCAGCACCATAGATGCTCAAGAAGTAGAGACAATTTGAACGATTTT
+ACCAGCCATCATCCTTATTCTAATCGCCCTCCCATCCCTACGAATTCTAT
+ATATAATAGATGAAATCAATAATCCGTCCCTCACAGTCAAAACAATAGGC
+CACCAATGATACTGAAGCTACGAGTATACCGATTACGAAGACTTGACCTT
+TGACTCCTACATGATCCCCACATCAGACCTAAAACCAGGAGAATTACGTC
+TTCTAGAAGTCGACAATCGAGTGGTTCTCCCCATAGAAATAACCATCCGA
+ATGCTAATTTCATCCGAAGACGTCCTACACTCATGAGCTGTGCCCTCCCT
+AGGCCTAAAAACAGACGCTATCCCTGGGCGCCTAAATCAGACAACTCTCG
+TGGCCTCTCGACCAGGACTTTACTACGGTCAATGCTCAGAGATCTGCGGA
+TCAAACCACAGCTTTATACCAATTGTCCTTGAACTAGTTCCACTGAAACA
+CTTCGAAGAATGATCTGCATCAATATTATAAAGTCACTAAGAAGCTATTA
+TAGCATTAACCTTTTAAGTTAAAGATTGAGGGTTCAACCCCCTCCCTAGT
+GATATGCCACAGTTGGATACATCAACATGATTTATTAATATCGTCTCAAT
+AATCCTAACTCTATTTATTGTATTTCAACTAAAAATCTCAAAGCACTCCT
+ATCCGACACACCCAGAAGTAAAGACAACCAAAATAACAAAACACTCTGCC
+CCTTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCA
+ACAATAGTAGGCCTCCCTATTGTAATTCTGATCATCATATTTCCCAGCAT
+CCTATTCCCCTCACCCAACCGACTAATCAACAATCGCCTAATCTCAATTC
+AACAATGGCTAGTCCAACTTACATCAAAACAAATAATAGCTATCCATAAC
+AGCAAAGGACAAACCTGAACTCTTATACTCATATCACTGATCCTATTCAT
+TGGCTCAACAAACTTATTAGGCCTACTACCTCACTCATTTACACCAACAA
+CACAACTATCAATAAACCTAGGCATAGCTATTCCCCTATGGGCAGGGACA
+GTATTCATAGGCTTTCGTCACAAAACAAAAGCAGCCCTAGCCCACTTTCT
+ACCTCAAGGGACGCCCATTTTCCTCATCCCCATACTAGTAATTATCGAGA
+CTATCAGCCTATTTATTCAACCTGTAGCCCTAGCCGTGCGGCTAACCGCT
+AACATTACCGCCGGACACCTCCTAATACACCTCATCGGAGGGGCAACACT
+AGCCCTCATAAGCATCAGCCCCTCAACAGCCCTTATTACGTTTATCATCC
+TAATTCTACTAACTATCCTCGAATTCGCAGTAGCTATAATCCAAGCCTAC
+GTATTCACTCTCCTGGTAAGCCTTTACTTACACGACAACACCTAATGACC
+CACCAAACCCACGCTTACCACATAGTAAACCCCAGCCCATGACCACTTAC
+AGGAGCCCTATCAGCCCTCCTGATAACATCAGGACTAGCCATGTGATTTC
+ACTTTAACTCAACCTTACTTCTAGCTATAGGGCTATTAACTAACATCCTT
+ACCATATATCAATGATGACGAGACATCATCCGAGAAAGCACATTCCAAGG
+CCATCACACATCAATCGTTCAAAAGGGACTCCGATATGGCATAATCCTTT
+TTATTATCTCAGAAGTCTTCTTCTTCTCTGGCTTCTTCTGAGCCTTTTAC
+CACTCAAGCCTAGCCCCCACACCCGAACTAGGCGGCTGCTGACCACCCAC
+AGGTATCCACCCCTTAAACCCCCTAGAAGTCCCCTTACTCAACACCTCAG
+TGCTCCTAGCATCTGGAGTCTCTATCACCTGAGCCCACCATAGCCTAATA
+GAAGGAAACCGTAAAAATATGCTCCAAGGCCTATTCATCACAATTTCACT
+AGGCGTATACTTCACCCTTCTCCAAGCCTCAGAATACTATGAAGCCTCAT
+TTACTATTTCAGATGGAGTATACGGATCAACATTTTTCGTAGCAACAGGG
+TTCCACGGACTACACGTAATTATCGGATCTACCTTCCTCATTGTATGTTT
+CCTACGCCAACTAAAATTCCACTTTACATCCAGCCACCACTTCGGATTCG
+AAGCAGCCGCTTGATACTGACACTTCGTCGACGTAGTCTGACTATTCTTG
+TACGTCTCTATTTATTGATGAGGATCCTATTCTTTTAGTATTGACCAGTA
+CAATTGACTTCCAATCAATCAGCTTCGGTATAACCCGAAAAAGAATAATA
+AACCTCATACTGACACTCCTCACTAACACATTACTAGCCTCGCTACTCGT
+ACTCATCGCATTCTGACTACCACAACTAAACATCTATGCAGAAAAAACCA
+GCCCATATGAATGCGGATTTGACCCTATAGGGTCAGCACGCCTCCCCTTC
+TCAATAAAATTTTTCTTAGTGGCCATTACATTTCTGCTATTCGACTTAGA
+AATTGCCCTCCTATTACCCCTTCCATGAGCATCCCAAACAACTAACCTAA
+ACACTATACTTATCATAGCACTAGTCCTAATCTCTCTTCTAGCCATCAGC
+CTAGCCTACGAATGAACCCAAAAAGGACTAGAATGAACTGAGTATGGTAA
+TTAGTTTAAACCAAAACAAATGATTTCGACTCATTAAACTATGATTAACT
+TCATAATTACCAACATGTCACTAGTCCATATTAATATCTTCCTAGCATTC
+ACAGTATCCCTCGTAGGCCTACTAATGTACCGATCCCACCTAATATCCTC
+ACTCCTATGCCTAGAAGGAATAATACTATCACTATTCGTCATAGCAACCA
+TAATAGTCCTAAACACCCACTTCACACTAGCTAGTATAATACCTATCATC
+TTACTAGTATTTGCTGCCTGCGAACGAGCTCTAGGATTATCCCTACTAGT
+CATAGTCTCCAATACTTATGGAGTAGACCACGTACAAAACCTTAACCTCC
+TCCAATGCTAAAAATTATCATTCCCACAATCATACTTATGCCCCTTACAT
+GACTATCAAAAAAGAATATAATCTGAATCAACACTACAACCTATAGTCTA
+TTAATCAGCCTTATCAGCCTATCCCTCCTAAACCAACCTAGCAACAATAG
+CCTAAACTTCTCACTAATATTCTTCTCCGATCCCCTATCAGCCCCACTTC
+TGGTGTTGACAACATGACTACTGCCACTAATACTCATAGCCAGCCAACAC
+CATCTATCTAAGGAACCACTAATCCGAAAAAAACTCTACATCACCATGCT
+AACCATACTTCAAACTTTCCTAATCATGACTTTTACCGCCACAGAACTAA
+TCTCCTTCTACATCCTATTTGAAGCCACATTAGTTCCAACACTAATTATC
+ATCACCCGCTGAGGCAACCAAACAGAACGCCTGAACGCAGGCCTCTACTT
+CCTATTCTACACACTAATAGGTTCCCTCCCACTCTTAGTTGCACTAATCT
+CTATCCAAAACCTAACAGGCTCACTAAACTTCCTATTAATTCAATACTGA
+AACCAAGCACTACCCGACTCTTGATCCAATATTTTCCTATGACTAGCATG
+TATAATAGCATTCATAGTCAAAATACCGGTATATGGTCTTCACCTCTGAC
+TCCCAAAAGCCCATGTAGAAGCCCCAATTGCCGGATCCATAGTGCTAGCA
+GCCATTCTACTAAAACTAGGAGGCTACGGAATACTACGAATTACAACAAT
+ACTAAACCCCCAAACTAGCTTTATAGCCTACCCCTTCCTCATACTATCCC
+TGTGAGGAATAATCATAACTAGTTCCATCTGCTTGCGACAAACCGATCTA
+AAATCACTTATTGCATACTCCTCTGTCAGCCACATAGCCCTAGTAATCGT
+AGCCGTCCTCATCCAAACACCATGAAGTTATATAGGAGCTACAGCCCTAA
+TAATCGCTCACGGCCTTACATCATCAATACTATTCTGCCTGGCAAACTCA
+AATTACGAACGTACCCATAGCCGAACTATAATCCTAGCCCGCGGGCTTCA
+AACACTTCTTCCCCTTATAGCAGCCTGATGACTATTAGCCAGCCTAACCA
+ACCTGGCCCTCCCTCCCAGCATTAACCTAATTGGAGAGCTATTCGTAGTA
+ATATCATCATTCTCATGATCAAATATTACCATTATCCTAATAGGAGCCAA
+TATCACCATCACCGCCCTCTACTCCCTATACATACTAATCACAACACAAC
+GAGGGAAATACACACACCATATCAACAGCATTAAACCTTCATTTACACGA
+GAAAACGCACTCATGGCCCTCCACATGACTCCCCTACTACTCCTATCACT
+TAACCCTAAAATTATCCTAGGCTTTACGTACTGTAAATATAGTTTAACAA
+AAACACTAGATTGTGGATCTAGAAACAGAAACTTAATATTTCTTATTTAC
+CGAGAAAGTATGCAAGAACTGCTAATTCATGCCCCCATGTCCAACAAACA
+TGGCTCTCTCAAACTTTTAAAGGATAGGAGCTATCCGTTGGTCTTAGGAA
+CCAAAAAATTGGTGCAACTCCAAATAAAAGTAATCAACATGTTCTCCTCC
+CTCATACTAGTTTCACTATTAGTACTAACCCTCCCAATCATATTATCAAT
+CTTCAATACCTACAAAAACAGCACGTTCCCGCATCATGTAAAAAACACTA
+TCTCATATGCCTTCATTACTAGCCTAATTCCCACTATAATATTTATTCAC
+TCTGGACAAGAAACAATTATCTCAAACTGACACTGAATAACCATACAAAC
+CCTCAAACTATCCCTAAGCTTCAAACTAGATTACTTCTCAATAATTTTCG
+TACCAGTAGCCCTATTCGTAACATGATCTATTATGGAATTCTCCCTATGA
+TACATGCACTCAGATCCTTACATTACTCGATTTTTTAAATACTTACTTAC
+ATTCCTCATCACTATAATAATTCTAGTCACAGCTAACAACCTTTTCCAAC
+TGTTCATCGGATGGGAGGGAGTAGGCATCATGTCATTCTTACTAATCGGA
+TGATGATACGGCCGAACAGATGCCAACACCGCGGCCCTTCAAGCAATCCT
+TTATAACCGCATCGGGGATATCGGCTTCATCATGGCCATAGCCTGATTCC
+TATTCAACACCAACACATGAGACCTCCAACAAATCTTCATACTCGACCCC
+AACCTTACCAACCTCCCGCTCCTAGGCCTCCTCCTAGCCGCAACTGGCAA
+ATCCGCTCAATTTGGACTCCACCCATGACTTCCTTCAGCCATAGAGGGCC
+CTACACCAGTCTCAGCCCTACTCCACTCCAGCACAATAGTTGTAGCAGGC
+GTCTTCCTGCTAATCCGCTTCCATCCACTAATAGAAAACAACAAAACAAT
+CCAGTCACTTACCCTATGCCTAGGAGCCATCACCACACTATTCACAGCAA
+TCTGCGCACTCACTCAAAACGATATCAAAAAAATCATTGCTTTCTCCACC
+TCCAGCCAACTAGGCCTGATAATCGTAACCATCGGTATCAATCAACCCTA
+CCTAGCATTCCTCCACATTTGCACTCACGCATTCTTCAAAGCTATACTAT
+TTATATGTTCCGGATCCATTATCCACAGCCTAAATGACGAGCAAGATATC
+CGAAAAATAGGCGGACTATTTAATGCAATACCCTTCACCACCACATCTCT
+AATTATTGGCAGCCTTGCACTCACCGGAATTCCTTTCCTCACAGGCTTCT
+ACTCCAAAGACCTCATCATCGAAACCGCCAACACATCGTACACCAACGCC
+TGAGCCCTACTAATAACTCTCATTGCCACATCCCTCACAGCTGTCTACAG
+TACCCGAATCATCTTCTTTGCACTCCTAGGGCAACCCCGCTTCCTCCCTC
+TGACCTCAATCAACGAAAATAACCCCTTTCTAATTAACTCCATCAAACGC
+CTCTTAATTGGCAGCATTTTTGCCGGATTCTTCATCTCCAACAATATCTA
+CCCCACAACCGTCCCAGAAATAACCATACCTACTTACATAAAACTCACCG
+CCCTCGCAGTAACCATCCTAGGATTTACACTAGCCCTAGAACTAAGCTTG
+ATAACCCATAACTTAAAACTAGAACACTCCACCAACGTATTCAAATTCTC
+CAACCTCCTAGGATACTACCCAACAATTATACACCGACTCCCACCGCTCG
+CTAACCTATCAATAAGCCAAAAATCAGCATCACTTCTACTAGACTCAATC
+TGACTAGAAAACATCCTGCCAAAATCTATCTCCCAGTTCCAAATAAAAAC
+CTCGATCCTAATTTCCACCCAAAAAGGACAAATCAAATTATATTTCCTCT
+CATTCCTCATCACCCTTACCCTAAGCATACTACTTTTTAATCTCCACGAG
+TAACCTCTAAAATTACCAAGACCCCAACAAGCAACGATCAACCAGTCACA
+ATCACAACCCAAGCCCCATAACTATACAATGCAGCAGCCCCTATAATTTC
+CTCACTAAACGCCCCAGAATCTCCAGTATCATAAATAGCTCAAGCCCCCA
+CACCACTAAACTTAAACACTACCCCCACTTCCTCACTCTTCAGAACATAT
+AAAACCAACATAACCTCCATCAACAACCCTAAAAGAAATACCCCCATAAC
+AGTCGTATTAGACACCCATACCTCAGGATACTGCTCAGTAGCCATAGCCG
+TTGTATAACCAAAAACAACCAACATTCCTCCCAAATAAATCAAAAACACC
+ATCAACCCCAAAAAGGACCCTCCAAAATTCATAATAATACCACAACCTAC
+CCCTCCACTTACAATCAGCACTAAACCCCCATAAATAGGTGAAGGTTTTG
+AAGAAAACCCCACAAAACTAACAACAAAAATAACACTCAAAATAAACACA
+ATATATGTCATCATTATTCCCACGTGGAATCTAACCACGACCAATGACAT
+GAAAAATCATCGTTGTATTTCAACTATAAGAACACCAATGACAAACATCC
+GGAAATCTCACCCACTAATTAAAATCATCAATCACTCTTTTATTGACCTA
+CCAGCCCCCTCAAACATTTCATCATGATGAAACTTCGGCTCCCTCCTAGG
+AATCTGCCTAATCCTCCAAATCTTAACAGGCCTATTCCTAGCCATACACT
+ACACATCAGACACGACAACTGCCTTCTCATCCGTCACTCACATCTGCCGA
+GACGTTAACTACGGATGAATTATTCGCTACCTCCATGCCAACGGAGCATC
+AATATTTTTTATCTGCCTCTTCATTCACGTAGGACGCGGCCTCTACTACG
+GCTCTTACACATTCCTAGAGACATGAAACATTGGAATCATCCTACTTTTC
+ACAGTTATAGCTACAGCATTCATGGGCTATGTCCTACCATGAGGCCAAAT
+ATCCTTTTGAGGAGCAACAGTCATCACGAACCTCCTATCAGCAATTCCCT
+ACATCGGTACTACCCTCGTCGAGTGAATCTGAGGTGGATTCTCAGTAGAC
+AAAGCCACCCTTACCCGATTTTTTGCTTTCCACTTCATCCTACCCTTCAT
+CATCACAGCCCTGGTAGTCGTACATTTACTATTTCTTCACGAAACAGGAT
+CTAATAACCCCTCAGGAATCCCATCCGATATGGACAAAATCCCATTCCAC
+CCATATTATACAATTAAAGACATCCTAGGACTCCTCCTCCTGATCTTGCT
+CCTACTAACTCTAGTATTATTCTCCCCCGACCTCCTAGGAGACCCAGACA
+ACTACACCCCAGCTAACCCTCTCAGCACTCCCCCTCATATTAAACCAGAA
+TGGTACTTCCTGTTTGCCTACGCCATCCTACGCTCCATTCCCAACAAACT
+AGGCGGCGTATTAGCCCTAATCCTCTCCATCCTGATCCTAGCACTCATCC
+CCACCCTCCACATATCAAAACAACGAAGCATAATATTCCGGCCTCTCAGC
+CAATGCGTATTCTGACTCTTAGTGGCAGACTTACTGACACTAACATGAAT
+CGGCGGACAGCCAGTGGAACACCCATACGTAATTATCGGCCAACTGGCCT
+CAATCCTCTACTTCTCCCTAATTCTCATTTTTATACCACTCGCAAGCACC
+ATCGAAAACAATCTTCTAAAATGAAGAGTCCCTGTAGTATATCGCACATT
+ACCCTGGTCTTGTAAACCAGAAAAGGGGGAAAACGTTTCCTCCCAAGGAC
+TATCAAGGAAGAAGCTCTAGCTCCACCATCAACACCCAAAGCTGAAATTC
+TACTTAAACTATTCCTTGATTTCTTCCCCTAAACGACAACAATTTACCCT
+CATGTGCTATGTCAGTATCAGATTATACCCCCACATAACACCATACCCAC
+CTGACATGCAATATCTTATGAATGGCCTATGTACGTCGTGCATTAAATTG
+TCTGCCCCATGAATAATAAGCATGTACATAATATCATTTATCTTACATAA
+GTACATTATATTATTGATCGTGCATACCCCATCCAAGTCAAATCATTTCC
+AGTCAACACGCATATCACAGCCCATGTTCCACGAGCTTAATCACCAAGCC
+GCGGGAAATCAGCAACCCTCCCAACTACGTGTCCCAATCCTCGCTCCGGG
+CCCATCCAAACGTGGGGGTTTCTACAATGAAACTATACCTGGCATCTGGT
+TCTTTCTTCAGGGCCATTCCCACCCAACCTCGCCCATTCTTTCCCCTTAA
+ATAAGACATCTCGATGGACTAATGACTAATCAGCCCATGCTCACACATAA
+CTGTGATTTCATGCATTTGGTATCTTTTTATATTTGGGGATGCTATGACT
+CAGCTATGGCCGTCAAAGGCCTCGACGCAGTCAATTAAATTGAAGCTGGA
+CTTAAATTGAACGTTATTCCTCCGCATCAGCAACCATAAGGTGTTATTCA
+GTCCATGGTAGCGGGACATAGGAAACAAgtgcacctgtgcacctgtgcac
+ctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacct
+gtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgt
+gcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgc
+acctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcac
+ctgtgcacctACCCGCGCAGTAAGCAAGTAATATAGCTTTCTTAATCAAA
+CCCCCCCTACCCCCCATTAAACTCCACATATGTACATTCAACACAATCTT
+GCCAAACCCCAAAAACAAGACTAAACAATGCACAATACTTCATGAAGCTT
+AACCCTCGCATGCCAACCATAATAACTCAACACACCTAACAATCTTAACA
+GAACTTTCCCCCCGCCATTAATACCAACATGCTACTTTAATCAATAAAAT
+TTCCATAGACAGGCATCCCCCTAGATCTAATTTTCTAAATCTGTCAACCC
+TTCTTCCCCC
diff -r 000000000000 -r 95612c159681 test-data/sam_pileup_in1.bam
Binary file test-data/sam_pileup_in1.bam has changed
diff -r 000000000000 -r 95612c159681 test-data/sam_pileup_out1.pileup
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sam_pileup_out1.pileup	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,3286 @@
+chrM	23	A	1	^:.	I
+chrM	24	A	1	.	I
+chrM	25	G	1	.	I
+chrM	26	C	1	.	I
+chrM	27	A	1	.	I
+chrM	28	A	1	.	I
+chrM	29	G	1	.	I
+chrM	30	G	1	N	"
+chrM	31	C	1	N	"
+chrM	32	A	1	.	I
+chrM	33	C	1	.	I
+chrM	34	T	1	.	I
+chrM	35	G	1	.	I
+chrM	36	A	1	.	I
+chrM	37	A	1	.	I
+chrM	38	A	1	.	I
+chrM	39	A	1	.	I
+chrM	40	T	1	.	I
+chrM	41	G	1	.	I
+chrM	42	C	1	.	I
+chrM	43	C	1	.	I
+chrM	44	T	1	.	I
+chrM	45	A	1	.	I
+chrM	46	G	1	.	I
+chrM	47	A	1	.	E
+chrM	48	T	1	.	I
+chrM	49	G	1	.	I
+chrM	50	A	1	.	I
+chrM	51	G	1	.	I
+chrM	52	T	1	.	I
+chrM	53	A	1	.	I
+chrM	54	T	1	.	I
+chrM	55	T	1	.	I
+chrM	56	C	1	.	I
+chrM	57	T	1	.	I
+chrM	58	T	1	.$	I
+chrM	96	T	1	^:.	I
+chrM	97	T	1	.	I
+chrM	98	A	1	.	I
+chrM	99	G	1	.	I
+chrM	100	T	1	.	I
+chrM	101	T	1	.	I
+chrM	102	A	1	.	I
+chrM	103	T	1	N	"
+chrM	104	T	1	N	"
+chrM	105	A	1	.	I
+chrM	106	A	1	.	I
+chrM	107	T	1	.	I
+chrM	108	A	1	.	I
+chrM	109	G	1	.	I
+chrM	110	A	1	.	I
+chrM	111	A	1	.	I
+chrM	112	T	1	.	I
+chrM	113	T	1	.	I
+chrM	114	A	1	.	I
+chrM	115	C	1	.	I
+chrM	116	A	1	.	I
+chrM	117	C	1	.	I
+chrM	118	A	1	.	H
+chrM	119	T	1	.	I
+chrM	120	G	1	.	I
+chrM	121	C	1	.	I
+chrM	122	A	1	.	E
+chrM	123	A	1	.	I
+chrM	124	G	1	.	5
+chrM	125	T	1	.	I
+chrM	126	A	1	.	I
+chrM	127	T	1	.	I
+chrM	128	C	1	.	I
+chrM	129	C	1	.	I
+chrM	130	G	1	.	4
+chrM	131	C	1	.$	I
+chrM	492	A	1	^:,	I
+chrM	493	A	1	,	I
+chrM	494	A	1	,	I
+chrM	495	C	1	,	E
+chrM	496	T	1	,	I
+chrM	497	G	1	,	I
+chrM	498	G	1	,	I
+chrM	499	G	1	,	I
+chrM	500	A	1	,	I
+chrM	501	T	1	,	I
+chrM	502	T	1	,	I
+chrM	503	A	1	,	I
+chrM	504	G	1	,	I
+chrM	505	A	1	,	I
+chrM	506	T	1	,	I
+chrM	507	A	1	,	I
+chrM	508	C	1	,	I
+chrM	509	C	1	,	I
+chrM	510	C	1	,	I
+chrM	511	C	1	,	I
+chrM	512	A	1	,	I
+chrM	513	C	1	,	I
+chrM	514	T	1	,	I
+chrM	515	A	1	,	I
+chrM	516	T	1	,	I
+chrM	517	G	1	,	I
+chrM	518	C	1	,	I
+chrM	519	T	1	n	"
+chrM	520	T	1	n	"
+chrM	521	A	1	,	I
+chrM	522	G	1	,	I
+chrM	523	C	1	,	I
+chrM	524	C	1	,	I
+chrM	525	C	1	,	I
+chrM	526	T	1	,	I
+chrM	527	A	1	,$	I
+chrM	893	G	1	^:,	6
+chrM	894	C	1	,	0
+chrM	895	T	1	,	4
+chrM	896	T	1	,	I
+chrM	897	A	1	,	I
+chrM	898	A	1	,	I
+chrM	899	T	1	,	?
+chrM	900	T	1	,	I
+chrM	901	G	1	,	I
+chrM	902	A	1	,	I
+chrM	903	A	1	,	I
+chrM	904	T	1	,	<
+chrM	905	C	1	,	I
+chrM	906	A	1	,	I
+chrM	907	G	1	,	I
+chrM	908	G	1	,	I
+chrM	909	C	1	,	I
+chrM	910	C	1	,	I
+chrM	911	A	1	,	I
+chrM	912	T	1	,	I
+chrM	913	G	1	,	I
+chrM	914	A	1	,	I
+chrM	915	A	1	,	I
+chrM	916	G	1	,	I
+chrM	917	C	1	,	I
+chrM	918	G	1	,	I
+chrM	919	C	1	,	I
+chrM	920	G	1	n	"
+chrM	921	C	1	n	"
+chrM	922	A	1	,	I
+chrM	923	C	1	,	I
+chrM	924	A	1	,	I
+chrM	925	C	1	,	I
+chrM	926	A	1	,	I
+chrM	927	C	1	,	I
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+chrM	1159	T	1	^:.	I
+chrM	1160	T	1	.	I
+chrM	1161	A	1	.	I
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+chrM	1163	C	1	.	I
+chrM	1164	T	1	.	I
+chrM	1165	A	1	.	I
+chrM	1166	A	1	N	"
+chrM	1167	A	1	N	"
+chrM	1168	A	1	.	I
+chrM	1169	C	1	.	I
+chrM	1170	A	1	.	I
+chrM	1171	T	1	.	I
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+chrM	1173	C	1	.	I
+chrM	1174	A	1	.	I
+chrM	1175	C	1	.	I
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+chrM	1177	A	1	.	I
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+chrM	1179	A	1	.	A
+chrM	1180	C	1	.	I
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+chrM	1182	A	1	.	=
+chrM	1183	T	1	.	I
+chrM	1184	T	1	.	I
+chrM	1185	A	1	.	B
+chrM	1186	A	1	.	5
+chrM	1187	A	1	.	8
+chrM	1188	G	1	.	I
+chrM	1189	T	1	.	=
+chrM	1190	A	1	.	<
+chrM	1191	T	1	.	I
+chrM	1192	A	2	.^:.	;I
+chrM	1193	G	2	..	II
+chrM	1194	G	2	.$.	II
+chrM	1195	A	1	.	I
+chrM	1196	G	1	.	I
+chrM	1197	A	1	.	I
+chrM	1198	T	1	.	I
+chrM	1199	A	1	N	"
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+chrM	1201	A	1	.	I
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+chrM	1203	A	1	.	I
+chrM	1204	T	1	.	I
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+chrM	1208	A	1	.	I
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+chrM	1210	C	1	.	I
+chrM	1211	T	1	.	I
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+chrM	1219	A	1	.	I
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+chrM	1221	A	1	.	C
+chrM	1222	G	1	.	<
+chrM	1223	A	1	.	I
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+chrM	1225	A	1	.	I
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+chrM	1227	A	1	.$	I
+chrM	1499	A	1	^:,	I
+chrM	1500	A	1	,	I
+chrM	1501	A	1	,	I
+chrM	1502	T	1	,	I
+chrM	1503	T	2	,^:,	EI
+chrM	1504	T	2	,,	II
+chrM	1505	A	2	,,	II
+chrM	1506	C	2	,,	+,
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+chrM	1508	T	2	,,	II
+chrM	1509	A	2	,,	II
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+chrM	1514	C	2	,,	II
+chrM	1515	T	2	,,	II
+chrM	1516	A	2	,,	II
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+chrM	1524	C	2	,,	II
+chrM	1525	T	2	,,	II
+chrM	1526	A	2	n,	"I
+chrM	1527	A	2	n,	"I
+chrM	1528	T	2	,,	II
+chrM	1529	G	2	,,	II
+chrM	1530	T	2	,n	I"
+chrM	1531	A	2	,n	I"
+chrM	1532	A	2	,,	II
+chrM	1533	A	2	,,	II
+chrM	1534	T	2	,$,	II
+chrM	1535	T	1	,	I
+chrM	1536	T	1	,	I
+chrM	1537	A	1	,	I
+chrM	1538	A	1	,$	I
+chrM	1616	A	1	^:.	I
+chrM	1617	G	1	.	I
+chrM	1618	T	1	.	I
+chrM	1619	T	1	.	I
+chrM	1620	G	1	.	I
+chrM	1621	G	1	.	I
+chrM	1622	C	1	.	I
+chrM	1623	T	1	N	"
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+chrM	1625	A	1	.	I
+chrM	1626	A	1	.	I
+chrM	1627	A	1	.	I
+chrM	1628	A	1	.	I
+chrM	1629	G	1	.	I
+chrM	1630	C	1	.	I
+chrM	1631	A	1	.	I
+chrM	1632	G	1	.	I
+chrM	1633	C	1	.	I
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+chrM	1635	A	1	.	C
+chrM	1636	T	1	.	I
+chrM	1637	C	1	.	I
+chrM	1638	A	1	.	=
+chrM	1639	A	1	.	G
+chrM	1640	T	1	.	I
+chrM	1641	T	1	.	I
+chrM	1642	A	1	.	I
+chrM	1643	A	1	.	I
+chrM	1644	G	1	.	I
+chrM	1645	A	1	.	@
+chrM	1646	A	1	.	I
+chrM	1647	A	1	.	G
+chrM	1648	G	1	.	I
+chrM	1649	C	1	.	I
+chrM	1650	G	1	.	I
+chrM	1651	T	1	.$	I
+chrM	2261	C	1	^:,	I
+chrM	2262	A	1	,	I
+chrM	2263	G	1	,	I
+chrM	2264	C	1	,	I
+chrM	2265	A	1	,	G
+chrM	2266	A	1	,	I
+chrM	2267	T	1	,	2
+chrM	2268	T	1	,	=
+chrM	2269	T	1	,	3
+chrM	2270	C	1	,	I
+chrM	2271	G	1	,	I
+chrM	2272	G	1	,	I
+chrM	2273	T	1	,	I
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+chrM	2280	G	1	,	I
+chrM	2281	A	1	,	I
+chrM	2282	C	1	,	I
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+chrM	2284	T	1	,	I
+chrM	2285	C	1	,	I
+chrM	2286	G	1	,	I
+chrM	2287	G	1	,	I
+chrM	2288	A	1	n	"
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+chrM	2290	A	1	,	I
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+chrM	2292	C	1	,	I
+chrM	2293	A	1	,	I
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+chrM	2295	A	1	,	I
+chrM	2296	A	1	,$	I
+chrM	2334	A	1	^:,	I
+chrM	2335	A	1	,	I
+chrM	2336	A	1	,	I
+chrM	2337	T	1	,	I
+chrM	2338	A	1	,	I
+chrM	2339	T	1	,	H
+chrM	2340	A	1	,	I
+chrM	2341	T	1	,	=
+chrM	2342	A	1	,	I
+chrM	2343	A	1	,	I
+chrM	2344	T	1	,	C
+chrM	2345	C	1	,	I
+chrM	2346	A	1	,	I
+chrM	2347	C	1	,	I
+chrM	2348	T	1	,	?
+chrM	2349	T	1	,	I
+chrM	2350	A	1	,	I
+chrM	2351	T	1	,	I
+chrM	2352	T	1	,	I
+chrM	2353	G	1	,	I
+chrM	2354	A	1	,	I
+chrM	2355	T	1	,	D
+chrM	2356	C	1	,	I
+chrM	2357	C	1	,	I
+chrM	2358	A	1	,	I
+chrM	2359	A	1	,	I
+chrM	2360	A	1	,	I
+chrM	2361	C	1	n	"
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+chrM	2363	A	1	,	I
+chrM	2364	T	1	,	I
+chrM	2365	T	1	,	I
+chrM	2366	G	1	,	I
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+chrM	2369	C	1	,$	I
+chrM	2389	G	1	^:,	I
+chrM	2390	G	1	,	8
+chrM	2391	G	1	,	I
+chrM	2392	A	1	,	I
+chrM	2393	T	1	,	I
+chrM	2394	A	1	,	I
+chrM	2395	A	1	,	I
+chrM	2396	C	1	,	8
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+chrM	2398	G	1	,	I
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+chrM	2400	G	1	,	I
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+chrM	2402	A	1	,	I
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+chrM	2404	T	1	,	I
+chrM	2405	C	1	,	I
+chrM	2406	C	1	,	I
+chrM	2407	T	1	,	G
+chrM	2408	A	1	,	I
+chrM	2409	T	1	,	I
+chrM	2410	T	1	,	B
+chrM	2411	C	1	,	I
+chrM	2412	C	1	,	I
+chrM	2413	A	1	,	I
+chrM	2414	G	1	,	I
+chrM	2415	A	1	,	I
+chrM	2416	G	1	n	"
+chrM	2417	T	1	n	"
+chrM	2418	C	1	,	I
+chrM	2419	C	1	,	I
+chrM	2420	A	1	,	I
+chrM	2421	T	1	,	I
+chrM	2422	A	1	,	I
+chrM	2423	T	1	,	I
+chrM	2424	C	1	,$	I
+chrM	2735	t	1	^:,	I
+chrM	2736	t	1	,	9
+chrM	2737	t	1	,	I
+chrM	2738	a	1	,	I
+chrM	2739	c	1	,	I
+chrM	2740	a	1	,	I
+chrM	2741	c	1	,	I
+chrM	2742	t	1	,	5
+chrM	2743	c	1	,	I
+chrM	2744	a	1	,	I
+chrM	2745	g	1	,	I
+chrM	2746	a	1	,	I
+chrM	2747	g	1	,	I
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+chrM	2749	t	1	,	I
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+chrM	2751	c	1	,	I
+chrM	2752	a	1	,	I
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+chrM	2754	c	1	,	I
+chrM	2755	t	1	,	I
+chrM	2756	c	1	,	I
+chrM	2757	c	1	,	I
+chrM	2758	t	1	,	I
+chrM	2759	c	1	,	I
+chrM	2760	t	1	,	I
+chrM	2761	c	1	,	I
+chrM	2762	c	1	n	"
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+chrM	2764	t	1	,	I
+chrM	2765	a	1	,	I
+chrM	2766	a	1	,	I
+chrM	2767	c	1	,	I
+chrM	2768	a	1	,	I
+chrM	2769	a	1	,	I
+chrM	2770	c	1	,$	I
+chrM	2844	G	1	^:.	I
+chrM	2845	A	1	.	I
+chrM	2846	A	1	.	I
+chrM	2847	A	1	.	I
+chrM	2848	A	1	.	I
+chrM	2849	G	1	.	I
+chrM	2850	T	1	.	I
+chrM	2851	C	1	N	"
+chrM	2852	T	1	N	"
+chrM	2853	T	1	.	I
+chrM	2854	A	1	.	I
+chrM	2855	G	1	.	I
+chrM	2856	G	1	.	I
+chrM	2857	C	1	.	I
+chrM	2858	T	1	.	I
+chrM	2859	A	1	.	I
+chrM	2860	T	1	.	I
+chrM	2861	A	1	.	B
+chrM	2862	T	1	.	I
+chrM	2863	G	1	.	I
+chrM	2864	C	1	.	I
+chrM	2865	A	1	.	I
+chrM	2866	A	1	.	B
+chrM	2867	C	1	.	I
+chrM	2868	T	1	.	I
+chrM	2869	T	1	.	I
+chrM	2870	C	1	.	I
+chrM	2871	G	1	.	=
+chrM	2872	C	1	.	I
+chrM	2873	A	1	.	@
+chrM	2874	A	1	.	9
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+chrM	2876	G	1	.	D
+chrM	2877	G	1	.	2
+chrM	2878	A	1	.	*
+chrM	2879	C	1	.$	I
+chrM	3080	T	1	^:.	I
+chrM	3081	T	1	.	I
+chrM	3082	C	1	.	I
+chrM	3083	A	1	.	I
+chrM	3084	T	1	.	I
+chrM	3085	A	1	.	I
+chrM	3086	C	1	.	I
+chrM	3087	T	1	N	"
+chrM	3088	A	1	N	"
+chrM	3089	G	1	.	I
+chrM	3090	C	1	.	I
+chrM	3091	C	1	.	I
+chrM	3092	A	1	.	I
+chrM	3093	T	1	.	I
+chrM	3094	G	1	.	I
+chrM	3095	T	1	.	I
+chrM	3096	C	1	.	I
+chrM	3097	C	1	.	I
+chrM	3098	A	1	.	I
+chrM	3099	G	1	.	H
+chrM	3100	C	1	.	I
+chrM	3101	C	1	.	I
+chrM	3102	T	1	.	I
+chrM	3103	A	1	.	I
+chrM	3104	G	1	.	I
+chrM	3105	C	1	.	I
+chrM	3106	T	1	.	I
+chrM	3107	G	1	.	I
+chrM	3108	T	1	.	I
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+chrM	3110	T	1	.	I
+chrM	3111	A	1	.	<
+chrM	3112	C	1	.	I
+chrM	3113	T	1	.	I
+chrM	3114	C	1	.	I
+chrM	3115	A	1	.$	F
+chrM	3188	A	1	^:,	I
+chrM	3189	T	1	,	=
+chrM	3190	C	1	,	I
+chrM	3191	T	1	,	I
+chrM	3192	C	1	,	I
+chrM	3193	A	1	,	I
+chrM	3194	T	1	,	I
+chrM	3195	A	1	,	I
+chrM	3196	C	1	,	I
+chrM	3197	G	1	,	@
+chrM	3198	A	1	,	I
+chrM	3199	A	1	,	I
+chrM	3200	G	1	,	I
+chrM	3201	T	1	,	I
+chrM	3202	A	1	,	I
+chrM	3203	A	1	,	I
+chrM	3204	C	1	,	I
+chrM	3205	T	1	,	I
+chrM	3206	C	1	,	I
+chrM	3207	T	1	,	I
+chrM	3208	A	1	,	I
+chrM	3209	G	1	,	I
+chrM	3210	C	1	,	I
+chrM	3211	A	1	,	I
+chrM	3212	A	1	,	I
+chrM	3213	T	1	,	I
+chrM	3214	C	1	,	I
+chrM	3215	A	1	n	"
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+chrM	3217	C	1	,	I
+chrM	3218	C	1	,	I
+chrM	3219	T	1	,	I
+chrM	3220	A	1	,	I
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+chrM	3223	C	1	,$	I
+chrM	3502	A	1	^:.	I
+chrM	3503	G	1	.	I
+chrM	3504	C	1	.	I
+chrM	3505	A	1	.	I
+chrM	3506	T	1	.	I
+chrM	3507	T	1	.	I
+chrM	3508	T	1	.	I
+chrM	3509	C	1	N	"
+chrM	3510	A	1	N	"
+chrM	3511	C	1	.	I
+chrM	3512	A	1	.	I
+chrM	3513	A	1	.	I
+chrM	3514	C	1	.	I
+chrM	3515	C	1	.	I
+chrM	3516	C	1	.	I
+chrM	3517	C	1	.	I
+chrM	3518	T	1	.	I
+chrM	3519	A	1	.	I
+chrM	3520	C	1	.	I
+chrM	3521	C	1	.	I
+chrM	3522	T	1	.	I
+chrM	3523	G	1	.	I
+chrM	3524	C	1	.	I
+chrM	3525	C	1	.	I
+chrM	3526	A	1	.	>
+chrM	3527	G	1	.	I
+chrM	3528	A	1	.	4
+chrM	3529	A	1	.	@
+chrM	3530	C	1	.	I
+chrM	3531	T	1	.	I
+chrM	3532	C	1	.	I
+chrM	3533	T	1	.	I
+chrM	3534	A	1	.	I
+chrM	3535	C	1	.	I
+chrM	3536	T	1	.	I
+chrM	3537	C	1	.$	I
+chrM	3678	G	1	^:.	I
+chrM	3679	A	1	.	I
+chrM	3680	C	1	.	I
+chrM	3681	A	1	.	I
+chrM	3682	C	1	.	I
+chrM	3683	G	1	.	I
+chrM	3684	T	1	.	I
+chrM	3685	C	1	N	"
+chrM	3686	T	1	N	"
+chrM	3687	C	1	.	I
+chrM	3688	A	1	.	I
+chrM	3689	C	1	.	I
+chrM	3690	T	1	.	I
+chrM	3691	T	1	.	I
+chrM	3692	C	1	.	I
+chrM	3693	C	1	.	I
+chrM	3694	A	1	.	I
+chrM	3695	A	1	.	:
+chrM	3696	T	1	.	I
+chrM	3697	C	1	.	I
+chrM	3698	A	1	.	I
+chrM	3699	T	1	.	I
+chrM	3700	A	1	.	8
+chrM	3701	C	1	.	I
+chrM	3702	T	1	.	I
+chrM	3703	A	1	.	E
+chrM	3704	T	1	.	I
+chrM	3705	C	1	.	I
+chrM	3706	C	1	.	I
+chrM	3707	A	1	.	I
+chrM	3708	G	1	.	-
+chrM	3709	C	1	.	I
+chrM	3710	A	1	.	A
+chrM	3711	T	1	.	I
+chrM	3712	C	1	.	I
+chrM	3713	C	1	.$	I
+chrM	3753	T	1	^:.	I
+chrM	3754	T	1	.	I
+chrM	3755	T	1	.	I
+chrM	3756	G	1	.	I
+chrM	3757	A	1	.	I
+chrM	3758	T	1	.	I
+chrM	3759	A	1	.	I
+chrM	3760	G	1	N	"
+chrM	3761	A	1	N	"
+chrM	3762	G	1	.	I
+chrM	3763	T	1	.	I
+chrM	3764	A	1	.	I
+chrM	3765	A	1	.	I
+chrM	3766	A	1	.	I
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+chrM	3768	C	1	.	I
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+chrM	3770	T	1	.	I
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+chrM	3786	C	1	.	I
+chrM	3787	T	1	.	I
+chrM	3788	T	1	.$	I
+chrM	3841	t	1	^:,	G
+chrM	3842	g	1	,	I
+chrM	3843	c	1	,	+
+chrM	3844	t	1	,	I
+chrM	3845	a	1	,	I
+chrM	3846	c	1	,	%
+chrM	3847	c	1	,	(
+chrM	3848	g	1	,	I
+chrM	3849	a	1	,	I
+chrM	3850	a	1	,	I
+chrM	3851	t	1	,	I
+chrM	3852	t	1	,	I
+chrM	3853	a	1	,	I
+chrM	3854	c	1	,	I
+chrM	3855	a	1	,	I
+chrM	3856	c	1	,	I
+chrM	3857	c	1	,	I
+chrM	3858	a	1	,	I
+chrM	3859	t	1	,	I
+chrM	3860	g	1	,	I
+chrM	3861	t	1	,	I
+chrM	3862	c	1	,	I
+chrM	3863	c	1	,	I
+chrM	3864	t	1	,	I
+chrM	3865	a	1	,	I
+chrM	3866	C	1	,	I
+chrM	3867	A	1	,	I
+chrM	3868	A	1	n	"
+chrM	3869	G	1	n	"
+chrM	3870	T	1	,	I
+chrM	3871	A	1	,	I
+chrM	3872	A	1	,	I
+chrM	3873	G	1	,	I
+chrM	3874	G	1	,	I
+chrM	3875	T	1	,	I
+chrM	3876	C	1	,$	I
+chrM	3921	C	1	^:,	I
+chrM	3922	A	1	,	I
+chrM	3923	C	1	,	I
+chrM	3924	C	1	,	I
+chrM	3925	C	1	,	I
+chrM	3926	T	1	,	=
+chrM	3927	T	1	,	A
+chrM	3928	C	1	,	I
+chrM	3929	C	1	,	I
+chrM	3930	C	1	,	I
+chrM	3931	G	1	,	I
+chrM	3932	T	1	,	I
+chrM	3933	A	1	,	I
+chrM	3934	C	1	,	I
+chrM	3935	T	1	,	I
+chrM	3936	A	1	,	I
+chrM	3937	A	1	,	I
+chrM	3938	T	1	,	I
+chrM	3939	A	1	,	I
+chrM	3940	A	1	,	I
+chrM	3941	A	1	,	I
+chrM	3942	T	1	,	B
+chrM	3943	C	1	,	I
+chrM	3944	C	1	,	I
+chrM	3945	C	1	,	I
+chrM	3946	C	1	,	I
+chrM	3947	T	1	,	I
+chrM	3948	T	1	n	"
+chrM	3949	A	1	n	"
+chrM	3950	T	1	,	I
+chrM	3951	C	1	,	I
+chrM	3952	T	1	,	I
+chrM	3953	T	1	,	I
+chrM	3954	C	1	,	I
+chrM	3955	A	1	,	I
+chrM	3956	C	1	,$	I
+chrM	4249	A	1	^:,	I
+chrM	4250	A	1	,	I
+chrM	4251	A	1	,	I
+chrM	4252	C	1	,	I
+chrM	4253	T	1	,	5
+chrM	4254	T	1	,	6
+chrM	4255	G	1	,	I
+chrM	4256	G	1	,	I
+chrM	4257	A	1	,	I
+chrM	4258	C	1	,	I
+chrM	4259	T	1	,	I
+chrM	4260	C	1	,	I
+chrM	4261	A	1	,	I
+chrM	4262	C	1	,	I
+chrM	4263	A	1	,	I
+chrM	4264	C	1	,	I
+chrM	4265	C	1	,	I
+chrM	4266	A	1	,	I
+chrM	4267	T	1	,	I
+chrM	4268	T	1	,	I
+chrM	4269	C	1	,	I
+chrM	4270	C	1	,	I
+chrM	4271	A	1	,	I
+chrM	4272	C	1	,	I
+chrM	4273	T	1	,	I
+chrM	4274	T	1	,	I
+chrM	4275	C	1	,	I
+chrM	4276	T	1	n	"
+chrM	4277	G	1	n	"
+chrM	4278	A	1	,	I
+chrM	4279	G	1	,	I
+chrM	4280	T	1	,	I
+chrM	4281	A	1	,	I
+chrM	4282	C	1	,	I
+chrM	4283	C	1	,	I
+chrM	4284	C	1	,$	I
+chrM	4552	T	1	^:.	I
+chrM	4553	T	1	.	I
+chrM	4554	A	1	.	I
+chrM	4555	A	1	.	I
+chrM	4556	T	1	.	I
+chrM	4557	T	1	.	I
+chrM	4558	T	1	.	I
+chrM	4559	A	1	N	"
+chrM	4560	C	1	N	"
+chrM	4561	A	1	.	I
+chrM	4562	T	1	.	I
+chrM	4563	T	1	.	I
+chrM	4564	A	1	.	I
+chrM	4565	T	1	.	I
+chrM	4566	A	1	.	I
+chrM	4567	A	1	.	I
+chrM	4568	T	1	.	I
+chrM	4569	A	1	.	I
+chrM	4570	A	1	.	I
+chrM	4571	C	1	.	I
+chrM	4572	A	1	.	I
+chrM	4573	C	1	.	I
+chrM	4574	T	1	.	I
+chrM	4575	C	1	.	I
+chrM	4576	A	1	.	I
+chrM	4577	C	1	.	I
+chrM	4578	A	1	.	I
+chrM	4579	A	1	.	?
+chrM	4580	T	1	.	I
+chrM	4581	A	1	.	6
+chrM	4582	T	1	.	I
+chrM	4583	T	1	.	I
+chrM	4584	C	1	.	I
+chrM	4585	A	1	.	I
+chrM	4586	T	1	.	I
+chrM	4587	A	1	.$	6
+chrM	4697	T	1	^:,	5
+chrM	4698	C	1	,	=
+chrM	4699	C	1	,	4
+chrM	4700	C	1	,	&
+chrM	4701	C	1	,	G
+chrM	4702	C	1	,	1
+chrM	4703	C	1	,	3
+chrM	4704	A	1	,	I
+chrM	4705	C	1	,	.
+chrM	4706	T	1	,	?
+chrM	4707	A	1	,	I
+chrM	4708	T	1	,	I
+chrM	4709	C	1	,	I
+chrM	4710	A	1	,	I
+chrM	4711	G	1	,	I
+chrM	4712	G	1	,	I
+chrM	4713	A	1	,	I
+chrM	4714	T	1	,	I
+chrM	4715	T	1	,	I
+chrM	4716	C	1	,	I
+chrM	4717	A	1	,	I
+chrM	4718	T	1	,	I
+chrM	4719	A	1	,	I
+chrM	4720	C	1	,	I
+chrM	4721	C	1	,	I
+chrM	4722	C	1	,	I
+chrM	4723	A	1	,	I
+chrM	4724	A	1	n	"
+chrM	4725	A	1	n	"
+chrM	4726	T	1	,	I
+chrM	4727	G	1	,	I
+chrM	4728	A	1	,	I
+chrM	4729	A	1	,	I
+chrM	4730	T	1	,	I
+chrM	4731	A	1	,	I
+chrM	4732	A	1	,$	I
+chrM	4742	A	1	^:.	I
+chrM	4743	G	1	.	I
+chrM	4744	C	1	.	I
+chrM	4745	T	1	.	I
+chrM	4746	C	1	.	I
+chrM	4747	A	1	.	I
+chrM	4748	C	1	.	I
+chrM	4749	C	1	N	"
+chrM	4750	A	1	N	"
+chrM	4751	A	1	.	I
+chrM	4752	A	1	.	I
+chrM	4753	A	1	.	I
+chrM	4754	A	1	.	I
+chrM	4755	T	1	.	I
+chrM	4756	A	1	.	I
+chrM	4757	G	1	.	I
+chrM	4758	C	1	.	I
+chrM	4759	A	1	.	I
+chrM	4760	G	1	.	I
+chrM	4761	C	1	.	I
+chrM	4762	A	1	.	I
+chrM	4763	T	1	.	I
+chrM	4764	C	1	.	I
+chrM	4765	A	1	.	I
+chrM	4766	T	1	.	I
+chrM	4767	C	1	.	I
+chrM	4768	C	1	.	I
+chrM	4769	T	1	.	I
+chrM	4770	C	1	.	I
+chrM	4771	C	1	.	I
+chrM	4772	C	1	.	I
+chrM	4773	C	1	.	I
+chrM	4774	A	1	.	8
+chrM	4775	C	1	.	I
+chrM	4776	A	1	.	:
+chrM	4777	C	1	.$	I
+chrM	4932	C	1	^:,	I
+chrM	4933	T	1	,	-
+chrM	4934	C	1	,	A
+chrM	4935	C	1	,	I
+chrM	4936	C	1	,	I
+chrM	4937	T	1	,	7
+chrM	4938	A	1	,	I
+chrM	4939	C	1	,	I
+chrM	4940	T	1	,	5
+chrM	4941	C	1	,	I
+chrM	4942	C	1	,	I
+chrM	4943	T	1	,	:
+chrM	4944	C	1	,	I
+chrM	4945	C	1	,	I
+chrM	4946	C	1	,	I
+chrM	4947	C	1	,	I
+chrM	4948	C	1	,	I
+chrM	4949	T	1	,	I
+chrM	4950	A	1	,	I
+chrM	4951	A	1	,	I
+chrM	4952	C	1	,	I
+chrM	4953	C	1	,	I
+chrM	4954	C	1	,	I
+chrM	4955	C	1	,	I
+chrM	4956	C	1	,	I
+chrM	4957	A	1	,	I
+chrM	4958	T	1	,	I
+chrM	4959	A	1	n	"
+chrM	4960	C	1	n	"
+chrM	4961	T	1	,	I
+chrM	4962	A	1	,	I
+chrM	4963	T	1	,	I
+chrM	4964	C	1	,	I
+chrM	4965	A	1	,	I
+chrM	4966	A	1	,	I
+chrM	4967	T	1	,$	I
+chrM	5155	G	1	^:,	7
+chrM	5156	T	1	,	I
+chrM	5157	T	1	,	I
+chrM	5158	A	1	,	I
+chrM	5159	A	1	,	I
+chrM	5160	C	1	,	I
+chrM	5161	A	1	,	I
+chrM	5162	G	1	,	I
+chrM	5163	C	1	,	I
+chrM	5164	T	1	,	I
+chrM	5165	A	1	,	I
+chrM	5166	A	1	,	I
+chrM	5167	A	1	,	I
+chrM	5168	T	1	,	I
+chrM	5169	A	1	,	I
+chrM	5170	C	1	,	I
+chrM	5171	C	1	,	I
+chrM	5172	C	1	,	I
+chrM	5173	T	1	,	I
+chrM	5174	A	1	,	I
+chrM	5175	A	1	,	I
+chrM	5176	T	1	,	I
+chrM	5177	C	1	,	I
+chrM	5178	A	1	,	I
+chrM	5179	A	1	,	I
+chrM	5180	C	1	,	I
+chrM	5181	T	1	,	I
+chrM	5182	G	1	n	"
+chrM	5183	G	1	n	"
+chrM	5184	C	1	,	I
+chrM	5185	T	1	,	I
+chrM	5186	T	1	,	I
+chrM	5187	C	1	,	I
+chrM	5188	A	1	,	I
+chrM	5189	A	1	,	I
+chrM	5190	T	1	,$	I
+chrM	5309	T	1	^:,	I
+chrM	5310	C	1	,	I
+chrM	5311	C	1	,	I
+chrM	5312	A	1	,	I
+chrM	5313	A	1	,	I
+chrM	5314	C	1	,	I
+chrM	5315	C	1	,	I
+chrM	5316	C	1	,	I
+chrM	5317	C	1	,	I
+chrM	5318	T	1	,	I
+chrM	5319	G	1	,	I
+chrM	5320	T	1	,	I
+chrM	5321	C	1	,	I
+chrM	5322	T	1	,	I
+chrM	5323	T	1	,	I
+chrM	5324	T	1	,	I
+chrM	5325	A	1	,	I
+chrM	5326	G	1	,	I
+chrM	5327	A	1	,	I
+chrM	5328	T	1	,	I
+chrM	5329	T	1	,	I
+chrM	5330	T	1	,	I
+chrM	5331	A	1	,	I
+chrM	5332	C	1	,	I
+chrM	5333	A	1	,	I
+chrM	5334	G	1	,	I
+chrM	5335	T	1	,	I
+chrM	5336	C	1	n	"
+chrM	5337	T	1	n	"
+chrM	5338	A	1	,	I
+chrM	5339	A	1	,	I
+chrM	5340	T	1	,	I
+chrM	5341	G	1	,	I
+chrM	5342	C	1	,	I
+chrM	5343	T	1	,	I
+chrM	5344	T	1	,$	I
+chrM	5540	C	1	^:,	?
+chrM	5541	C	1	,	:
+chrM	5542	C	1	,	;
+chrM	5543	A	1	,	I
+chrM	5544	T	1	,	9
+chrM	5545	G	1	,	D
+chrM	5546	C	1	,	D
+chrM	5547	A	1	,	I
+chrM	5548	T	1	,	B
+chrM	5549	T	1	,	E
+chrM	5550	C	1	,	I
+chrM	5551	G	1	,	I
+chrM	5552	T	1	,	I
+chrM	5553	A	1	,	I
+chrM	5554	A	1	,	I
+chrM	5555	T	1	,	I
+chrM	5556	A	1	,	I
+chrM	5557	A	1	,	I
+chrM	5558	T	1	,	E
+chrM	5559	T	1	,	I
+chrM	5560	T	1	,	E
+chrM	5561	T	1	,	I
+chrM	5562	C	1	,	I
+chrM	5563	T	1	,	I
+chrM	5564	T	1	,	I
+chrM	5565	T	1	,	I
+chrM	5566	A	1	,	I
+chrM	5567	T	1	n	"
+chrM	5568	G	1	n	"
+chrM	5569	G	1	,	I
+chrM	5570	T	1	,	I
+chrM	5571	C	1	,	I
+chrM	5572	A	1	,	I
+chrM	5573	T	1	,	I
+chrM	5574	A	1	,	I
+chrM	5575	C	1	,$	I
+chrM	6016	T	1	^:,	@
+chrM	6017	T	1	,	7
+chrM	6018	C	1	,	I
+chrM	6019	T	1	,	<
+chrM	6020	T	1	,	?
+chrM	6021	C	1	,	I
+chrM	6022	G	1	,	I
+chrM	6023	A	1	,	I
+chrM	6024	C	1	,	I
+chrM	6025	C	1	,	I
+chrM	6026	C	1	,	I
+chrM	6027	C	1	,	I
+chrM	6028	G	1	,	I
+chrM	6029	C	1	,	I
+chrM	6030	A	1	,	I
+chrM	6031	G	1	,	I
+chrM	6032	G	1	,	I
+chrM	6033	A	1	,	I
+chrM	6034	G	1	,	I
+chrM	6035	G	1	,	I
+chrM	6036	A	1	,	I
+chrM	6037	G	1	,	I
+chrM	6038	G	1	,	I
+chrM	6039	G	1	,	I
+chrM	6040	G	2	,^:.	II
+chrM	6041	A	2	,.	II
+chrM	6042	T	2	,.	II
+chrM	6043	C	2	n.	"I
+chrM	6044	C	2	n.	"I
+chrM	6045	A	2	,.	II
+chrM	6046	A	2	,.	II
+chrM	6047	T	2	,N	I"
+chrM	6048	C	2	,N	I"
+chrM	6049	C	2	,.	II
+chrM	6050	T	2	,.	II
+chrM	6051	T	2	,$.	II
+chrM	6052	T	1	.	I
+chrM	6053	A	2	.^:.	II
+chrM	6054	T	2	..	II
+chrM	6055	C	2	..	II
+chrM	6056	A	2	..	II
+chrM	6057	A	2	..	II
+chrM	6058	C	2	..	II
+chrM	6059	A	2	..	II
+chrM	6060	C	2	.N	I"
+chrM	6061	C	2	.N	I"
+chrM	6062	T	2	..	II
+chrM	6063	A	2	..	II
+chrM	6064	T	2	..	II
+chrM	6065	T	2	..	II
+chrM	6066	C	2	..	II
+chrM	6067	T	2	..	II
+chrM	6068	G	2	..	II
+chrM	6069	A	2	..	II
+chrM	6070	T	2	..	II
+chrM	6071	T	2	..	II
+chrM	6072	C	2	..	II
+chrM	6073	T	2	..	II
+chrM	6074	T	2	..	II
+chrM	6075	C	2	.$.	II
+chrM	6076	G	1	.	I
+chrM	6077	G	1	.	I
+chrM	6078	A	1	.	I
+chrM	6079	C	1	.	I
+chrM	6080	A	1	.	A
+chrM	6081	C	1	.	I
+chrM	6082	C	1	.	I
+chrM	6083	C	1	.	I
+chrM	6084	C	1	.	I
+chrM	6085	G	1	.	F
+chrM	6086	A	1	.	(
+chrM	6087	A	1	.	.
+chrM	6088	G	1	.$	I
+chrM	6379	T	1	^:.	I
+chrM	6380	G	1	.	I
+chrM	6381	A	1	.	I
+chrM	6382	G	1	.	I
+chrM	6383	C	1	.	I
+chrM	6384	T	1	.	I
+chrM	6385	C	1	.	I
+chrM	6386	T	1	N	"
+chrM	6387	A	1	N	"
+chrM	6388	G	1	.	I
+chrM	6389	G	1	.	I
+chrM	6390	C	1	.	I
+chrM	6391	T	1	.	I
+chrM	6392	T	1	.	I
+chrM	6393	C	1	.	I
+chrM	6394	A	1	.	C
+chrM	6395	T	1	.	I
+chrM	6396	C	1	.	I
+chrM	6397	T	1	.	I
+chrM	6398	T	1	.	I
+chrM	6399	C	1	.	I
+chrM	6400	T	1	.	I
+chrM	6401	T	1	.	I
+chrM	6402	A	1	.	I
+chrM	6403	T	1	.	I
+chrM	6404	T	1	.	I
+chrM	6405	C	1	.	I
+chrM	6406	A	1	.	I
+chrM	6407	C	1	.	I
+chrM	6408	A	1	.	I
+chrM	6409	G	1	.	@
+chrM	6410	T	1	.	I
+chrM	6411	A	1	.	I
+chrM	6412	G	1	.	5
+chrM	6413	G	1	.	@
+chrM	6414	A	1	.$	F
+chrM	6591	A	1	^:.	I
+chrM	6592	A	1	.	I
+chrM	6593	A	1	.	I
+chrM	6594	A	1	.	I
+chrM	6595	A	1	.	I
+chrM	6596	T	1	.	I
+chrM	6597	C	1	.	I
+chrM	6598	C	1	N	"
+chrM	6599	A	1	N	"
+chrM	6600	C	1	.	I
+chrM	6601	T	1	.	I
+chrM	6602	T	1	.	I
+chrM	6603	T	1	.	I
+chrM	6604	A	1	.	I
+chrM	6605	C	1	.	I
+chrM	6606	A	1	.	I
+chrM	6607	A	1	.	I
+chrM	6608	T	1	.	I
+chrM	6609	T	1	.	I
+chrM	6610	A	1	.	I
+chrM	6611	T	1	.	I
+chrM	6612	A	1	.	I
+chrM	6613	T	1	.	I
+chrM	6614	T	1	.	I
+chrM	6615	C	1	.	I
+chrM	6616	G	1	.	F
+chrM	6617	T	1	.	I
+chrM	6618	A	1	.	I
+chrM	6619	G	1	.	I
+chrM	6620	G	1	.	6
+chrM	6621	G	1	.	A
+chrM	6622	G	1	.	I
+chrM	6623	T	1	.	I
+chrM	6624	A	1	.	I
+chrM	6625	A	1	.	G
+chrM	6626	A	1	.$	I
+chrM	6695	A	1	^:.	I
+chrM	6696	C	1	.	I
+chrM	6697	G	1	.	I
+chrM	6698	C	1	.	I
+chrM	6699	A	1	.	I
+chrM	6700	T	1	.	I
+chrM	6701	A	1	.	I
+chrM	6702	T	1	N	"
+chrM	6703	A	2	N^:.	"I
+chrM	6704	C	2	..	II
+chrM	6705	A	2	..	II
+chrM	6706	A	2	..	II
+chrM	6707	C	2	..	II
+chrM	6708	A	2	..	II
+chrM	6709	T	2	..	II
+chrM	6710	G	2	.N	I"
+chrM	6711	A	2	.N	I"
+chrM	6712	A	2	..	II
+chrM	6713	A	2	..	II
+chrM	6714	T	2	..	II
+chrM	6715	A	2	..	II
+chrM	6716	C	2	..	II
+chrM	6717	C	2	..	II
+chrM	6718	A	2	..	II
+chrM	6719	T	2	..	II
+chrM	6720	C	2	..	IA
+chrM	6721	T	2	..	II
+chrM	6722	C	2	..	II
+chrM	6723	A	2	..	FI
+chrM	6724	T	2	..	II
+chrM	6725	C	2	..	II
+chrM	6726	C	2	..	II
+chrM	6727	A	2	..	I>
+chrM	6728	T	2	..	II
+chrM	6729	A	2	..	GI
+chrM	6730	G	2	.$.	IH
+chrM	6731	G	1	.	I
+chrM	6732	A	1	.	=
+chrM	6733	T	1	.	I
+chrM	6734	C	1	.	I
+chrM	6735	T	1	.	I
+chrM	6736	T	1	.	I
+chrM	6737	T	1	.	I
+chrM	6738	T	1	.$	I
+chrM	6809	C	1	^:,	)
+chrM	6810	T	1	,	I
+chrM	6811	A	1	,	I
+chrM	6812	C	1	,	&
+chrM	6813	A	1	,	I
+chrM	6814	G	1	,	I
+chrM	6815	T	1	,	I
+chrM	6816	A	1	,	I
+chrM	6817	G	1	,	I
+chrM	6818	A	1	,	I
+chrM	6819	A	1	,	I
+chrM	6820	T	1	,	I
+chrM	6821	T	1	,	I
+chrM	6822	A	1	,	I
+chrM	6823	A	1	,	I
+chrM	6824	C	1	,	1
+chrM	6825	C	1	,	I
+chrM	6826	T	1	,	I
+chrM	6827	C	1	,	I
+chrM	6828	A	1	,	I
+chrM	6829	A	1	,	I
+chrM	6830	C	1	,	I
+chrM	6831	T	1	,	I
+chrM	6832	A	1	,	I
+chrM	6833	A	1	,	I
+chrM	6834	T	1	,	I
+chrM	6835	C	1	,	I
+chrM	6836	T	1	n	"
+chrM	6837	G	1	n	"
+chrM	6838	G	1	,	I
+chrM	6839	A	1	,	I
+chrM	6840	A	1	,	I
+chrM	6841	T	1	,	I
+chrM	6842	G	1	,	I
+chrM	6843	A	1	,	I
+chrM	6844	C	1	,$	I
+chrM	7018	A	1	^:.	I
+chrM	7019	A	1	.	I
+chrM	7020	A	1	.	I
+chrM	7021	T	1	.	I
+chrM	7022	T	1	.	I
+chrM	7023	A	1	.	I
+chrM	7024	T	1	.	I
+chrM	7025	A	1	N	"
+chrM	7026	G	1	N	"
+chrM	7027	G	1	.	I
+chrM	7028	T	1	.	I
+chrM	7029	T	1	.	I
+chrM	7030	A	1	.	I
+chrM	7031	A	1	.	I
+chrM	7032	A	1	.	I
+chrM	7033	C	1	.	I
+chrM	7034	C	1	.	I
+chrM	7035	C	1	.	I
+chrM	7036	C	1	.	I
+chrM	7037	T	1	.	I
+chrM	7038	A	1	.	I
+chrM	7039	T	1	.	I
+chrM	7040	A	1	.	B
+chrM	7041	T	1	.	I
+chrM	7042	A	1	.	D
+chrM	7043	C	1	.	I
+chrM	7044	C	1	.	I
+chrM	7045	T	1	.	I
+chrM	7046	C	1	.	I
+chrM	7047	T	1	.	I
+chrM	7048	A	1	.	0
+chrM	7049	T	1	.	I
+chrM	7050	G	1	.	I
+chrM	7051	G	1	.	-
+chrM	7052	C	1	.	I
+chrM	7053	C	1	.$	G
+chrM	7122	C	1	^:,	I
+chrM	7123	C	1	,	I
+chrM	7124	A	1	,	I
+chrM	7125	C	1	,	4
+chrM	7126	A	1	,	I
+chrM	7127	C	1	,	I
+chrM	7128	A	1	,	I
+chrM	7129	C	1	,	I
+chrM	7130	T	1	,	I
+chrM	7131	A	1	,	I
+chrM	7132	A	1	,	I
+chrM	7133	T	1	,	I
+chrM	7134	A	1	,	I
+chrM	7135	A	1	,	I
+chrM	7136	T	1	,	I
+chrM	7137	C	1	,	I
+chrM	7138	G	1	,	I
+chrM	7139	T	1	,	I
+chrM	7140	A	1	,	I
+chrM	7141	T	1	,	I
+chrM	7142	T	1	,	I
+chrM	7143	C	1	,	I
+chrM	7144	C	1	,	I
+chrM	7145	T	1	,	I
+chrM	7146	A	1	,	I
+chrM	7147	A	1	,	I
+chrM	7148	T	1	,	I
+chrM	7149	T	1	n	"
+chrM	7150	A	1	n	"
+chrM	7151	G	1	,	I
+chrM	7152	C	1	,	I
+chrM	7153	T	1	,	I
+chrM	7154	C	1	,	I
+chrM	7155	T	1	,	I
+chrM	7156	C	1	,	I
+chrM	7157	T	1	,$	I
+chrM	7191	T	1	^:,	<
+chrM	7192	A	1	,	I
+chrM	7193	A	1	,	I
+chrM	7194	A	1	,	I
+chrM	7195	T	1	,	0
+chrM	7196	T	1	,	E
+chrM	7197	A	1	,	I
+chrM	7198	A	1	,	I
+chrM	7199	C	1	,	3
+chrM	7200	C	1	,	+
+chrM	7201	C	1	,	3
+chrM	7202	A	1	,	I
+chrM	7203	T	1	,	2
+chrM	7204	A	1	,	9
+chrM	7205	C	1	,	I
+chrM	7206	C	1	,	>
+chrM	7207	A	1	,	I
+chrM	7208	G	1	,	I
+chrM	7209	C	1	,	I
+chrM	7210	A	1	,	8
+chrM	7211	C	1	,	A
+chrM	7212	C	1	,	I
+chrM	7213	A	1	,	I
+chrM	7214	T	1	,	I
+chrM	7215	A	1	,	I
+chrM	7216	G	1	,	I
+chrM	7217	A	1	,	I
+chrM	7218	T	1	n	"
+chrM	7219	G	1	n	"
+chrM	7220	C	1	,	I
+chrM	7221	T	1	,	I
+chrM	7222	C	1	,	I
+chrM	7223	A	1	,	I
+chrM	7224	A	1	,	I
+chrM	7225	G	1	,	I
+chrM	7226	A	1	,$	I
+chrM	7348	G	1	^:,	I
+chrM	7349	G	1	,	I
+chrM	7350	C	1	,	/
+chrM	7351	C	1	,	<
+chrM	7352	A	1	,	)
+chrM	7353	C	1	,	2
+chrM	7354	C	1	,	I
+chrM	7355	A	1	,	I
+chrM	7356	A	1	,	I
+chrM	7357	T	1	,	I
+chrM	7358	G	1	,	I
+chrM	7359	A	1	,	I
+chrM	7360	T	1	,	I
+chrM	7361	A	1	,	I
+chrM	7362	C	1	,	I
+chrM	7363	T	1	,	I
+chrM	7364	G	1	,	I
+chrM	7365	A	1	,	I
+chrM	7366	A	1	,	I
+chrM	7367	G	1	,	I
+chrM	7368	C	1	,	I
+chrM	7369	T	1	,	I
+chrM	7370	A	1	,	I
+chrM	7371	C	1	,	I
+chrM	7372	G	1	,	I
+chrM	7373	A	1	,	I
+chrM	7374	G	1	,	I
+chrM	7375	T	1	n	"
+chrM	7376	A	1	n	"
+chrM	7377	T	1	,	I
+chrM	7378	A	1	,	I
+chrM	7379	C	1	,	I
+chrM	7380	C	1	,	I
+chrM	7381	G	1	,	I
+chrM	7382	A	1	,	I
+chrM	7383	T	1	,$	I
+chrM	7398	C	1	^:,	I
+chrM	7399	T	1	,	E
+chrM	7400	T	1	,	I
+chrM	7401	T	1	,	I
+chrM	7402	G	1	,	I
+chrM	7403	A	1	,	I
+chrM	7404	C	1	,	I
+chrM	7405	T	1	,	I
+chrM	7406	C	1	,	I
+chrM	7407	C	1	,	I
+chrM	7408	T	1	,	I
+chrM	7409	A	1	,	I
+chrM	7410	C	1	,	I
+chrM	7411	A	1	,	I
+chrM	7412	T	1	,	I
+chrM	7413	G	1	,	I
+chrM	7414	A	1	,	I
+chrM	7415	T	1	,	I
+chrM	7416	C	1	,	I
+chrM	7417	C	1	,	I
+chrM	7418	C	1	,	I
+chrM	7419	C	1	,	I
+chrM	7420	A	1	,	I
+chrM	7421	C	1	,	I
+chrM	7422	A	1	,	I
+chrM	7423	T	1	,	I
+chrM	7424	C	1	,	I
+chrM	7425	A	1	n	"
+chrM	7426	G	1	n	"
+chrM	7427	A	1	,	I
+chrM	7428	C	1	,	I
+chrM	7429	C	1	,	I
+chrM	7430	T	1	,	I
+chrM	7431	A	1	,	I
+chrM	7432	A	1	,	I
+chrM	7433	A	1	,$	I
+chrM	7564	G	1	^:,	5
+chrM	7565	A	1	,	I
+chrM	7566	C	1	,	I
+chrM	7567	G	1	,	I
+chrM	7568	C	1	,	@
+chrM	7569	T	1	,	6
+chrM	7570	A	1	,	I
+chrM	7571	T	1	,	I
+chrM	7572	C	1	,	I
+chrM	7573	C	1	,	I
+chrM	7574	C	1	,	I
+chrM	7575	T	1	,	>
+chrM	7576	G	1	,	I
+chrM	7577	G	1	,	I
+chrM	7578	G	1	,	I
+chrM	7579	C	1	,	5
+chrM	7580	G	1	,	I
+chrM	7581	C	1	,	I
+chrM	7582	C	1	,	I
+chrM	7583	T	1	,	I
+chrM	7584	A	1	,	I
+chrM	7585	A	1	,	I
+chrM	7586	A	1	,	I
+chrM	7587	T	1	,	I
+chrM	7588	C	1	,	I
+chrM	7589	A	1	,	I
+chrM	7590	G	1	,	I
+chrM	7591	A	1	n	"
+chrM	7592	C	1	n	"
+chrM	7593	A	1	,	I
+chrM	7594	A	1	,	I
+chrM	7595	C	1	,	I
+chrM	7596	T	1	,	I
+chrM	7597	C	1	,	I
+chrM	7598	T	1	,	I
+chrM	7599	C	1	,$	I
+chrM	7752	A	1	^:.	I
+chrM	7753	G	1	.	I
+chrM	7754	C	1	.	I
+chrM	7755	A	1	.	I
+chrM	7756	T	1	.	I
+chrM	7757	T	1	.	I
+chrM	7758	A	1	.	I
+chrM	7759	A	1	N	"
+chrM	7760	C	1	N	"
+chrM	7761	C	1	.	I
+chrM	7762	T	1	.	I
+chrM	7763	T	1	.	I
+chrM	7764	T	1	.	I
+chrM	7765	T	1	.	I
+chrM	7766	A	1	.	I
+chrM	7767	A	1	.	,
+chrM	7768	G	1	.	I
+chrM	7769	T	1	.	I
+chrM	7770	T	1	.	I
+chrM	7771	A	1	.	B
+chrM	7772	A	1	.	;
+chrM	7773	A	1	.	B
+chrM	7774	G	1	.	I
+chrM	7775	A	1	.	<
+chrM	7776	T	1	.	I
+chrM	7777	T	1	.	I
+chrM	7778	G	1	.	I
+chrM	7779	A	1	.	I
+chrM	7780	G	1	.	I
+chrM	7781	G	1	.	I
+chrM	7782	G	1	.	+
+chrM	7783	T	1	.	I
+chrM	7784	T	1	.	I
+chrM	7785	C	1	.	I
+chrM	7786	A	1	.	B
+chrM	7787	A	1	.$	I
+chrM	7971	G	1	^:,	@
+chrM	7972	A	1	,	I
+chrM	7973	A	1	,	I
+chrM	7974	A	1	,	I
+chrM	7975	A	1	,	I
+chrM	7976	T	1	,	7
+chrM	7977	C	1	,	I
+chrM	7978	T	1	,	I
+chrM	7979	A	1	,	I
+chrM	7980	T	1	,	D
+chrM	7981	T	1	,	C
+chrM	7982	C	1	,	I
+chrM	7983	G	1	,	I
+chrM	7984	C	1	,	I
+chrM	7985	C	1	,	I
+chrM	7986	T	1	,	B
+chrM	7987	C	1	,	I
+chrM	7988	T	1	,	I
+chrM	7989	T	1	,	I
+chrM	7990	T	1	,	I
+chrM	7991	C	1	,	I
+chrM	7992	G	1	,	I
+chrM	7993	C	1	,	I
+chrM	7994	T	1	,	I
+chrM	7995	A	1	,	I
+chrM	7996	C	1	,	I
+chrM	7997	C	1	,	I
+chrM	7998	C	1	n	"
+chrM	7999	C	1	n	"
+chrM	8000	A	1	,	I
+chrM	8001	A	1	,	I
+chrM	8002	C	1	,	I
+chrM	8003	A	1	,	I
+chrM	8004	A	1	,	I
+chrM	8005	T	1	,	I
+chrM	8006	A	1	,$	I
+chrM	8346	T	1	^:.	I
+chrM	8347	T	1	.	I
+chrM	8348	T	1	.	I
+chrM	8349	C	1	.	I
+chrM	8350	T	1	.	I
+chrM	8351	A	1	.	I
+chrM	8352	C	1	.	I
+chrM	8353	C	1	N	"
+chrM	8354	T	1	N	"
+chrM	8355	C	1	.	I
+chrM	8356	A	1	.	I
+chrM	8357	A	1	.	I
+chrM	8358	G	1	.	I
+chrM	8359	G	1	.	I
+chrM	8360	G	1	.	=
+chrM	8361	A	1	.	I
+chrM	8362	C	1	.	7
+chrM	8363	G	1	.	I
+chrM	8364	C	1	.	I
+chrM	8365	C	1	.	I
+chrM	8366	C	1	.	I
+chrM	8367	A	1	.	3
+chrM	8368	T	1	.	I
+chrM	8369	T	1	.	I
+chrM	8370	T	1	.	I
+chrM	8371	T	1	.	I
+chrM	8372	C	1	.	I
+chrM	8373	C	1	.	I
+chrM	8374	T	1	.	I
+chrM	8375	C	1	.	I
+chrM	8376	A	1	.	/
+chrM	8377	T	1	.	I
+chrM	8378	C	1	.	D
+chrM	8379	C	1	.	@
+chrM	8380	C	1	.	I
+chrM	8381	C	1	.$	I
+chrM	8421	C	1	^:,	I
+chrM	8422	C	1	,	I
+chrM	8423	T	1	,	%
+chrM	8424	G	1	,	:
+chrM	8425	T	1	,	:
+chrM	8426	A	1	,	I
+chrM	8427	G	1	,	<
+chrM	8428	C	1	,	I
+chrM	8429	C	1	,	I
+chrM	8430	C	1	,	I
+chrM	8431	T	1	,	I
+chrM	8432	A	1	,	I
+chrM	8433	G	1	,	E
+chrM	8434	C	1	,	I
+chrM	8435	C	1	,	I
+chrM	8436	G	1	,	I
+chrM	8437	T	1	,	8
+chrM	8438	G	1	,	I
+chrM	8439	C	1	,	I
+chrM	8440	G	1	,	I
+chrM	8441	G	1	,	I
+chrM	8442	C	1	,	I
+chrM	8443	T	1	,	I
+chrM	8444	A	1	,	I
+chrM	8445	A	1	,	I
+chrM	8446	C	1	,	I
+chrM	8447	C	1	,	I
+chrM	8448	G	1	n	"
+chrM	8449	C	1	n	"
+chrM	8450	T	2	,^:,	II
+chrM	8451	A	2	,,	II
+chrM	8452	A	2	,,	II
+chrM	8453	C	2	,,	II
+chrM	8454	A	2	,,	II
+chrM	8455	T	2	,,	I>
+chrM	8456	T	2	,$,	I1
+chrM	8457	A	1	,	I
+chrM	8458	C	1	,	I
+chrM	8459	C	1	,	I
+chrM	8460	G	1	,	I
+chrM	8461	C	1	,	I
+chrM	8462	C	1	,	I
+chrM	8463	G	1	,	I
+chrM	8464	G	1	,	I
+chrM	8465	A	1	,	I
+chrM	8466	C	1	,	I
+chrM	8467	A	1	,	I
+chrM	8468	C	1	,	I
+chrM	8469	C	1	,	I
+chrM	8470	T	1	,	I
+chrM	8471	C	1	,	I
+chrM	8472	C	1	,	I
+chrM	8473	T	1	,	I
+chrM	8474	A	1	,	I
+chrM	8475	A	1	,	I
+chrM	8476	T	1	,	I
+chrM	8477	A	1	n	"
+chrM	8478	C	1	n	"
+chrM	8479	A	1	,	I
+chrM	8480	C	1	,	I
+chrM	8481	C	1	,	I
+chrM	8482	T	1	,	I
+chrM	8483	C	1	,	I
+chrM	8484	A	1	,	I
+chrM	8485	T	1	,$	I
+chrM	8630	A	1	^:.	I
+chrM	8631	C	1	.	I
+chrM	8632	A	1	.	I
+chrM	8633	C	1	.	I
+chrM	8634	G	1	.	I
+chrM	8635	A	1	.	I
+chrM	8636	C	1	.	I
+chrM	8637	A	1	N	"
+chrM	8638	A	1	N	"
+chrM	8639	C	1	.	I
+chrM	8640	A	1	.	I
+chrM	8641	C	1	.	I
+chrM	8642	C	1	.	I
+chrM	8643	T	1	.	I
+chrM	8644	A	1	.	I
+chrM	8645	A	1	.	I
+chrM	8646	T	1	.	I
+chrM	8647	G	1	.	I
+chrM	8648	A	1	.	I
+chrM	8649	C	1	.	I
+chrM	8650	C	1	.	I
+chrM	8651	C	1	.	I
+chrM	8652	A	1	.	I
+chrM	8653	C	1	.	I
+chrM	8654	C	1	.	I
+chrM	8655	A	1	.	>
+chrM	8656	A	1	.	C
+chrM	8657	A	1	.	:
+chrM	8658	C	1	.	I
+chrM	8659	C	1	.	I
+chrM	8660	C	1	.	I
+chrM	8661	A	1	.	D
+chrM	8662	C	1	.	I
+chrM	8663	G	1	.	<
+chrM	8664	C	1	.	I
+chrM	8665	T	1	.$	I
+chrM	8752	C	1	^:,	I
+chrM	8753	T	1	,	B
+chrM	8754	T	1	,	I
+chrM	8755	T	1	,	I
+chrM	8756	A	1	,	I
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+chrM	8763	C	1	,	I
+chrM	8764	C	2	,^:,	II
+chrM	8765	T	2	,,	IA
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+chrM	8769	T	2	,,	IH
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+chrM	8771	C	2	,,	II
+chrM	8772	T	2	,,	I?
+chrM	8773	A	2	,,	II
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+chrM	8779	A	2	n,	"I
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+chrM	8788	A	1	,	I
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+chrM	8910	C	1	,	I
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+chrM	8935	C	2	n,	"I
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+chrM	8937	T	2	,,	IG
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+chrM	8939	T	2	,,	IE
+chrM	8940	G	2	,,	II
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+chrM	8944	C	1	,	I
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+chrM	8956	A	1	n	"
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+chrM	9111	G	1	^:.	I
+chrM	9112	T	1	.	I
+chrM	9113	A	1	.	I
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+chrM	9118	T	1	N	"
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+chrM	9120	T	1	.	I
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+chrM	9143	A	1	.	8
+chrM	9144	T	1	.	I
+chrM	9145	T	1	.	I
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+chrM	9331	C	1	^:,	&
+chrM	9332	A	1	,	,
+chrM	9333	G	1	,	*
+chrM	9334	C	1	,	I
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+chrM	9336	A	1	,	-
+chrM	9337	C	1	,	<
+chrM	9338	C	1	,	?
+chrM	9339	A	1	,	<
+chrM	9340	C	1	,	I
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+chrM	9343	C	1	,	I
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+chrM	9346	A	1	,	1
+chrM	9347	T	1	,	I
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+chrM	9350	G	2	,^:.	II
+chrM	9351	A	2	,.	II
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+chrM	9357	C	2	,N	I"
+chrM	9358	C	2	nN	""
+chrM	9359	G	2	n.	"I
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+chrM	9367	C	1	.	I
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+chrM	9381	A	1	.	9
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+chrM	9563	C	1	^:,	I
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+chrM	9722	T	1	,	&
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+chrM	9810	G	1	^:,	A
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+chrM	9845	T	1	,$	I
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+chrM	9921	C	1	.	I
+chrM	9922	T	1	.	I
+chrM	9923	A	1	N	"
+chrM	9924	G	1	N	"
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+chrM	9927	C	1	.	I
+chrM	9928	A	1	.	I
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+chrM	10002	C	1	^:,	I
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+chrM	10402	G	1	.	I
+chrM	10403	G	1	.	I
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+chrM	10624	A	2	n,	"I
+chrM	10625	G	2	n,	"I
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+chrM	10736	T	1	.	I
+chrM	10737	T	1	.	I
+chrM	10738	A	1	N	"
+chrM	10739	A	1	N	"
+chrM	10740	T	1	.	I
+chrM	10741	T	1	.	I
+chrM	10742	C	1	.	I
+chrM	10743	A	1	.	I
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+chrM	10753	C	1	.	I
+chrM	10754	C	1	.	I
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+chrM	10757	G	1	.	I
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+chrM	10759	A	1	.	I
+chrM	10760	C	1	.	I
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+chrM	10762	A	1	.	@
+chrM	10763	C	1	.	I
+chrM	10764	C	1	.	I
+chrM	10765	C	1	.	I
+chrM	10766	G	1	.$	H
+chrM	10784	T	1	^:,	E
+chrM	10785	T	1	,	9
+chrM	10786	C	1	,	I
+chrM	10787	C	1	,	/
+chrM	10788	T	1	,	B
+chrM	10789	A	1	,	I
+chrM	10790	T	1	,	I
+chrM	10791	G	1	,	I
+chrM	10792	A	1	,	I
+chrM	10793	C	1	,	C
+chrM	10794	T	1	,	I
+chrM	10795	A	1	,	I
+chrM	10796	G	1	,	I
+chrM	10797	C	1	,	I
+chrM	10798	A	1	,	I
+chrM	10799	T	1	,	F
+chrM	10800	G	1	,	I
+chrM	10801	T	1	,	I
+chrM	10802	A	1	,	I
+chrM	10803	T	1	,	I
+chrM	10804	A	1	,	I
+chrM	10805	A	1	,	I
+chrM	10806	T	1	,	I
+chrM	10807	A	1	,	I
+chrM	10808	G	1	,	I
+chrM	10809	C	1	,	I
+chrM	10810	A	1	,	I
+chrM	10811	T	1	n	"
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+chrM	10813	C	1	,	I
+chrM	10814	A	1	,	I
+chrM	10815	T	1	,	I
+chrM	10816	A	1	,	I
+chrM	10817	G	1	,	I
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+chrM	10819	C	1	,$	I
+chrM	10864	T	1	^:,	D
+chrM	10865	G	1	,	B
+chrM	10866	T	1	,	A
+chrM	10867	A	1	,	I
+chrM	10868	G	1	,	I
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+chrM	10871	G	1	,	I
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+chrM	10874	C	1	,	I
+chrM	10875	C	1	,	I
+chrM	10876	A	1	,	I
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+chrM	10878	T	1	,	F
+chrM	10879	T	1	,	I
+chrM	10880	G	1	,	I
+chrM	10881	C	1	,	I
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+chrM	10885	A	1	,	I
+chrM	10886	T	1	,	I
+chrM	10887	C	1	,	I
+chrM	10888	C	1	,	I
+chrM	10889	A	1	,	I
+chrM	10890	T	1	,	I
+chrM	10891	A	2	n^:,	"5
+chrM	10892	G	2	n,	"7
+chrM	10893	T	2	,,	I-
+chrM	10894	G	2	,,	IC
+chrM	10895	C	2	,,	I5
+chrM	10896	T	2	,,	I,
+chrM	10897	A	2	,,	II
+chrM	10898	G	2	,,	I5
+chrM	10899	C	2	,$,	II
+chrM	10900	A	1	,	I
+chrM	10901	G	1	,	I
+chrM	10902	C	2	,^:,	I'
+chrM	10903	C	2	,,	IA
+chrM	10904	A	2	,,	II
+chrM	10905	T	2	,,	II
+chrM	10906	T	2	,,	II
+chrM	10907	C	2	,,	I7
+chrM	10908	T	2	,,	I=
+chrM	10909	A	2	,,	@I
+chrM	10910	C	2	,,	II
+chrM	10911	T	2	,,	ID
+chrM	10912	A	2	,,	II
+chrM	10913	A	2	,,	II
+chrM	10914	A	2	,,	II
+chrM	10915	A	2	,,	I8
+chrM	10916	C	2	,,	I6
+chrM	10917	T	2	,,	I.
+chrM	10918	A	2	n,	"I
+chrM	10919	G	2	n,	"I
+chrM	10920	G	2	,,	II
+chrM	10921	A	2	,,	II
+chrM	10922	G	2	,,	II
+chrM	10923	G	2	,,	II
+chrM	10924	C	2	,,	II
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+chrM	10926	A	2	,$,	II
+chrM	10927	C	1	,	I
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+chrM	10929	G	1	n	"
+chrM	10930	A	1	n	"
+chrM	10931	A	1	,	I
+chrM	10932	T	1	,	I
+chrM	10933	A	1	,	I
+chrM	10934	C	1	,	I
+chrM	10935	T	1	,	I
+chrM	10936	A	1	,	I
+chrM	10937	C	1	,$	7
+chrM	10991	A	1	^:.	I
+chrM	10992	T	1	.	I
+chrM	10993	A	1	.	I
+chrM	10994	C	1	.	I
+chrM	10995	T	1	.	I
+chrM	10996	A	1	.	I
+chrM	10997	T	1	.	I
+chrM	10998	C	1	N	"
+chrM	10999	C	1	N	"
+chrM	11000	C	1	.	I
+chrM	11001	T	1	.	I
+chrM	11002	G	1	.	I
+chrM	11003	T	1	.	I
+chrM	11004	G	1	.	I
+chrM	11005	A	1	.	2
+chrM	11006	G	1	.	I
+chrM	11007	G	1	.	I
+chrM	11008	A	1	.	I
+chrM	11009	A	1	.	I
+chrM	11010	T	1	.	I
+chrM	11011	A	1	.	I
+chrM	11012	A	1	.	I
+chrM	11013	T	1	.	I
+chrM	11014	C	1	.	I
+chrM	11015	A	1	.	I
+chrM	11016	T	1	.	I
+chrM	11017	A	1	.	F
+chrM	11018	A	1	.	I
+chrM	11019	C	1	.	I
+chrM	11020	T	1	.	I
+chrM	11021	A	1	.	:
+chrM	11022	G	1	.	I
+chrM	11023	T	1	.	I
+chrM	11024	T	1	.	I
+chrM	11025	C	1	.	I
+chrM	11026	C	1	.$	I
+chrM	11036	C	1	^:,	I
+chrM	11037	G	1	,	I
+chrM	11038	A	1	,	I
+chrM	11039	C	1	,	I
+chrM	11040	A	1	,	I
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+chrM	11043	C	1	,	I
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+chrM	11045	G	1	,	I
+chrM	11046	A	1	,	I
+chrM	11047	T	1	,	I
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+chrM	11050	A	1	,	I
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+chrM	11054	T	1	,	I
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+chrM	11056	A	1	,	I
+chrM	11057	C	1	,	I
+chrM	11058	T	1	,	I
+chrM	11059	T	1	,	I
+chrM	11060	A	1	,	I
+chrM	11061	T	1	,	I
+chrM	11062	T	1	,	I
+chrM	11063	G	1	n	"
+chrM	11064	C	1	n	"
+chrM	11065	A	1	,	I
+chrM	11066	T	1	,	I
+chrM	11067	A	1	,	I
+chrM	11068	C	1	,	I
+chrM	11069	T	1	,	I
+chrM	11070	C	1	,	I
+chrM	11071	C	1	,$	I
+chrM	11086	A	1	^:,	I
+chrM	11087	G	1	,	1
+chrM	11088	C	1	,	'
+chrM	11089	C	1	,	=
+chrM	11090	C	1	,	D
+chrM	11091	T	1	,	0
+chrM	11092	A	1	,	I
+chrM	11093	G	1	,	@
+chrM	11094	T	1	,	4
+chrM	11095	A	1	,	I
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+chrM	11097	T	1	,	A
+chrM	11098	C	1	,	I
+chrM	11099	G	1	,	I
+chrM	11100	T	1	,	D
+chrM	11101	A	1	,	I
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+chrM	11103	C	1	,	I
+chrM	11104	C	1	,	I
+chrM	11105	G	1	,	I
+chrM	11106	T	1	,	I
+chrM	11107	C	1	,	I
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+chrM	11109	T	1	,	I
+chrM	11110	C	1	,	I
+chrM	11111	A	1	,	I
+chrM	11112	T	1	,	I
+chrM	11113	C	1	n	"
+chrM	11114	C	1	n	"
+chrM	11115	A	1	,	I
+chrM	11116	A	1	,	I
+chrM	11117	A	1	,	I
+chrM	11118	C	1	,	I
+chrM	11119	A	1	,	I
+chrM	11120	C	1	,	I
+chrM	11121	C	1	,$	I
+chrM	11375	A	1	^:.	I
+chrM	11376	T	1	.	I
+chrM	11377	T	1	.	I
+chrM	11378	A	1	.	I
+chrM	11379	C	1	.	I
+chrM	11380	C	1	.	I
+chrM	11381	A	1	.	I
+chrM	11382	T	1	N	"
+chrM	11383	T	1	N	"
+chrM	11384	A	1	.	I
+chrM	11385	T	1	.	I
+chrM	11386	C	1	.	I
+chrM	11387	C	1	.	I
+chrM	11388	T	1	.	I
+chrM	11389	A	1	.	I
+chrM	11390	A	1	.	I
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+chrM	11392	A	1	.	G
+chrM	11393	G	1	.	I
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+chrM	11395	A	1	.	I
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+chrM	11397	C	1	.	I
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+chrM	11399	A	1	.	I
+chrM	11400	A	1	.	I
+chrM	11401	T	1	.	I
+chrM	11402	A	1	.	I
+chrM	11403	T	1	.	I
+chrM	11404	C	1	.	I
+chrM	11405	A	1	.	@
+chrM	11406	C	1	.	I
+chrM	11407	C	1	.	I
+chrM	11408	A	1	.	4
+chrM	11409	T	1	.	I
+chrM	11410	C	1	.$	I
+chrM	11457	A	1	^:.	I
+chrM	11458	A	1	.	I
+chrM	11459	T	1	.	I
+chrM	11460	A	1	.	I
+chrM	11461	C	1	.	I
+chrM	11462	A	1	.	I
+chrM	11463	C	1	.	I
+chrM	11464	A	1	N	"
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+chrM	11466	A	1	.	I
+chrM	11467	C	1	.	I
+chrM	11468	C	1	.	I
+chrM	11469	A	1	.	I
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+chrM	11471	A	1	.	I
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+chrM	11473	C	1	.	I
+chrM	11474	A	1	.	I
+chrM	11475	A	1	.	I
+chrM	11476	C	1	.	I
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+chrM	11478	G	1	.	I
+chrM	11479	C	1	.	I
+chrM	11480	A	1	.	I
+chrM	11481	T	1	.	I
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+chrM	11486	C	1	.	I
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+chrM	11488	T	1	.	I
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+chrM	11490	C	1	.	I
+chrM	11491	A	1	.	@
+chrM	11492	T	1	.$	I
+chrM	11616	G	1	^:,	I
+chrM	11617	A	1	,	I
+chrM	11618	T	1	,	9
+chrM	11619	C	1	,	I
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+chrM	11622	G	1	,	I
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+chrM	11632	C	1	,	I
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+chrM	11635	A	1	,	I
+chrM	11636	A	1	,	I
+chrM	11637	T	1	,	I
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+chrM	11639	T	1	,	I
+chrM	11640	T	1	,	I
+chrM	11641	T	1	,	I
+chrM	11642	C	1	,	I
+chrM	11643	T	1	n	"
+chrM	11644	T	1	n	"
+chrM	11645	A	1	,	I
+chrM	11646	T	1	,	I
+chrM	11647	T	1	,	I
+chrM	11648	T	1	,	I
+chrM	11649	A	1	,	I
+chrM	11650	C	1	,	I
+chrM	11651	C	1	,$	I
+chrM	11721	A	1	^:.	I
+chrM	11722	G	1	.	I
+chrM	11723	G	1	.	I
+chrM	11724	A	1	.	I
+chrM	11725	T	1	.	I
+chrM	11726	A	1	.	I
+chrM	11727	G	1	.	I
+chrM	11728	G	1	N	"
+chrM	11729	A	1	N	"
+chrM	11730	G	1	.	I
+chrM	11731	C	1	.	I
+chrM	11732	T	1	.	I
+chrM	11733	A	1	.	I
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+chrM	11735	C	1	.	I
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+chrM	11738	T	1	.	I
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+chrM	11740	G	1	.	I
+chrM	11741	G	1	.	I
+chrM	11742	T	1	.	I
+chrM	11743	C	1	.	I
+chrM	11744	T	1	.	I
+chrM	11745	T	1	.	I
+chrM	11746	A	1	.	I
+chrM	11747	G	1	.	I
+chrM	11748	G	1	.	I
+chrM	11749	A	1	.	F
+chrM	11750	A	1	.	I
+chrM	11751	C	1	.	I
+chrM	11752	C	1	.	I
+chrM	11753	A	1	.	H
+chrM	11754	A	1	.	:
+chrM	11755	A	1	.	6
+chrM	11756	A	1	.$	I
+chrM	12013	C	1	^:,	I
+chrM	12014	C	1	,	I
+chrM	12015	T	1	,	I
+chrM	12016	A	1	,	I
+chrM	12017	A	1	,	I
+chrM	12018	G	1	,	I
+chrM	12019	C	1	,	I
+chrM	12020	T	1	,	I
+chrM	12021	T	1	,	F
+chrM	12022	C	1	,	I
+chrM	12023	A	1	,	I
+chrM	12024	A	1	,	I
+chrM	12025	A	1	,	I
+chrM	12026	C	1	,	I
+chrM	12027	T	1	,	I
+chrM	12028	A	1	,	I
+chrM	12029	G	1	,	I
+chrM	12030	A	1	,	I
+chrM	12031	T	1	,	I
+chrM	12032	T	1	,	I
+chrM	12033	A	1	,	I
+chrM	12034	C	1	,	I
+chrM	12035	T	1	,	I
+chrM	12036	T	1	,	I
+chrM	12037	C	1	,	I
+chrM	12038	T	1	,	I
+chrM	12039	C	1	,	I
+chrM	12040	A	1	n	"
+chrM	12041	A	1	n	"
+chrM	12042	T	1	,	I
+chrM	12043	A	1	,	I
+chrM	12044	A	1	,	I
+chrM	12045	T	1	,	I
+chrM	12046	T	1	,	I
+chrM	12047	T	1	,	I
+chrM	12048	T	1	,$	I
+chrM	12295	A	1	^:.	I
+chrM	12296	A	1	.	I
+chrM	12297	T	1	.	I
+chrM	12298	C	1	.	I
+chrM	12299	C	1	.	I
+chrM	12300	T	1	.	I
+chrM	12301	T	1	.	I
+chrM	12302	T	1	N	"
+chrM	12303	A	1	N	"
+chrM	12304	T	1	.	I
+chrM	12305	A	1	.	I
+chrM	12306	A	1	.	I
+chrM	12307	C	1	.	I
+chrM	12308	C	1	.	I
+chrM	12309	G	1	.	I
+chrM	12310	C	1	.	I
+chrM	12311	A	1	.	I
+chrM	12312	T	1	.	I
+chrM	12313	C	1	.	I
+chrM	12314	G	1	.	I
+chrM	12315	G	1	.	I
+chrM	12316	G	1	.	I
+chrM	12317	G	1	.	I
+chrM	12318	A	1	.	I
+chrM	12319	T	1	.	I
+chrM	12320	A	1	.	I
+chrM	12321	T	1	.	I
+chrM	12322	C	1	.	I
+chrM	12323	G	1	.	I
+chrM	12324	G	1	.	I
+chrM	12325	C	1	.	I
+chrM	12326	T	1	.	I
+chrM	12327	T	1	.	I
+chrM	12328	C	1	.	:
+chrM	12329	A	1	.	(
+chrM	12330	T	1	.$	D
+chrM	12387	T	1	^:,	F
+chrM	12388	C	1	,	I
+chrM	12389	A	1	,	I
+chrM	12390	T	1	,	H
+chrM	12391	A	1	,	I
+chrM	12392	C	1	,	I
+chrM	12393	T	1	,	;
+chrM	12394	C	1	,	I
+chrM	12395	G	1	,	I
+chrM	12396	A	1	,	I
+chrM	12397	C	1	,	I
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+chrM	12399	C	1	,	I
+chrM	12400	C	1	,	I
+chrM	12401	A	1	,	I
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+chrM	12403	C	1	,	I
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+chrM	12405	T	1	,	I
+chrM	12406	T	1	,	I
+chrM	12407	A	1	,	I
+chrM	12408	C	1	,	I
+chrM	12409	C	1	,	I
+chrM	12410	A	1	,	I
+chrM	12411	A	1	,	I
+chrM	12412	C	1	,	I
+chrM	12413	C	1	,	I
+chrM	12414	T	1	n	"
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+chrM	12416	C	1	,	I
+chrM	12417	C	1	,	I
+chrM	12418	G	1	,	I
+chrM	12419	C	1	,	I
+chrM	12420	T	1	,	I
+chrM	12421	C	1	,	I
+chrM	12422	C	1	,$	I
+chrM	12584	G	1	^:.	I
+chrM	12585	A	1	.	I
+chrM	12586	A	1	.	I
+chrM	12587	A	1	.	I
+chrM	12588	A	1	.	I
+chrM	12589	C	1	.	I
+chrM	12590	A	1	.	I
+chrM	12591	A	1	N	"
+chrM	12592	C	1	N	"
+chrM	12593	A	1	.	I
+chrM	12594	A	1	.	I
+chrM	12595	A	1	.	I
+chrM	12596	A	1	.	I
+chrM	12597	C	1	.	I
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+chrM	12599	A	1	.	I
+chrM	12600	T	1	.	I
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+chrM	12604	G	1	.	I
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+chrM	12618	G	1	.	I
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+chrM	12988	G	1	^:.	I
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+chrM	12990	A	1	.	I
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+chrM	12993	C	1	.	I
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+chrM	12995	A	1	N	"
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+chrM	12997	C	1	.	I
+chrM	12998	G	1	.	I
+chrM	12999	C	1	.	I
+chrM	13000	C	1	.	I
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+chrM	13003	A	1	.	9
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+chrM	13008	T	1	.	I
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+chrM	13011	T	1	.	I
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+chrM	13015	A	1	.	9
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+chrM	13575	G	1	,	I
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+chrM	13587	T	1	n	"
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+chrM	13589	A	1	,	I
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+chrM	13790	T	1	N	"
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+chrM	13795	A	1	.	I
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+chrM	13809	C	1	.	I
+chrM	13810	A	1	.	?
+chrM	13811	T	1	.	I
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+chrM	13814	C	1	.	I
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+chrM	13855	G	1	^:,	I
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+chrM	13860	A	1	,	I
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+chrM	13875	A	1	,	I
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+chrM	13882	T	1	n	"
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+chrM	13884	C	1	,	I
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+chrM	13887	A	1	,	I
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+chrM	13890	A	1	,$	I
+chrM	14023	A	1	^:,	I
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+chrM	14028	C	1	,	&
+chrM	14029	C	1	,	G
+chrM	14030	C	1	,	I
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+chrM	14033	A	1	,	I
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+chrM	14035	A	2	,^:,	II
+chrM	14036	T	2	,,	;;
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+chrM	14042	A	2	,,	II
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+chrM	14044	G	2	,,	II
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+chrM	14046	T	2	,,	II
+chrM	14047	T	2	,,	II
+chrM	14048	T	2	,,	II
+chrM	14049	T	2	,,	II
+chrM	14050	G	2	n,	"I
+chrM	14051	A	2	n,	"I
+chrM	14052	A	2	,,	II
+chrM	14053	G	2	,,	II
+chrM	14054	A	2	,,	II
+chrM	14055	A	2	,,	II
+chrM	14056	A	2	,,	II
+chrM	14057	A	2	,,	II
+chrM	14058	C	2	,$,	II
+chrM	14059	C	1	,	I
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+chrM	14061	C	1	,	I
+chrM	14062	A	2	n^:,	"I
+chrM	14063	C	2	n,	"+
+chrM	14064	A	2	,,	II
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+chrM	14068	C	2	,,	I1
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+chrM	14070	A	2	,$,	II
+chrM	14071	A	1	,	I
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+chrM	14084	C	1	,	I
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+chrM	14088	C	1	,	I
+chrM	14089	A	1	n	"
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+chrM	14091	A	1	,	I
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+chrM	14093	T	1	,	I
+chrM	14094	A	1	,	I
+chrM	14095	A	1	,	I
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+chrM	14097	C	1	,$	I
+chrM	14239	T	1	^:,	I
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+chrM	14242	A	1	,	I
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+chrM	14244	T	1	,	B
+chrM	14245	G	1	,	I
+chrM	14246	A	1	,	I
+chrM	14247	C	1	,	I
+chrM	14248	C	1	,	I
+chrM	14249	T	1	,	I
+chrM	14250	A	1	,	I
+chrM	14251	C	1	,	I
+chrM	14252	C	1	,	I
+chrM	14253	A	1	,	I
+chrM	14254	G	1	,	I
+chrM	14255	C	1	,	I
+chrM	14256	C	1	,	I
+chrM	14257	C	1	,	I
+chrM	14258	C	1	,	I
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+chrM	14260	T	1	,	I
+chrM	14261	C	1	,	I
+chrM	14262	A	1	,	I
+chrM	14263	A	1	,	I
+chrM	14264	A	1	,	I
+chrM	14265	C	1	,	I
+chrM	14266	A	1	n	"
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+chrM	14268	T	1	,	I
+chrM	14269	T	1	,	I
+chrM	14270	C	1	,	I
+chrM	14271	A	1	,	I
+chrM	14272	T	1	,	I
+chrM	14273	C	1	,	I
+chrM	14274	A	1	,$	I
+chrM	14463	C	1	^:,	I
+chrM	14464	T	1	,	G
+chrM	14465	G	1	,	I
+chrM	14466	C	1	,	I
+chrM	14467	C	1	,	I
+chrM	14468	T	1	,	;
+chrM	14469	C	1	,	I
+chrM	14470	T	1	,	I
+chrM	14471	T	1	,	8
+chrM	14472	C	1	,	I
+chrM	14473	A	1	,	I
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+chrM	14478	C	1	,	I
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+chrM	14480	T	1	,	I
+chrM	14481	A	1	,	I
+chrM	14482	G	1	,	I
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+chrM	14484	A	1	,	I
+chrM	14485	C	1	,	I
+chrM	14486	G	1	,	I
+chrM	14487	C	1	,	I
+chrM	14488	G	1	,	I
+chrM	14489	G	1	,	I
+chrM	14490	C	1	n	"
+chrM	14491	C	1	n	"
+chrM	14492	T	1	,	I
+chrM	14493	C	1	,	I
+chrM	14494	T	1	,	I
+chrM	14495	A	1	,	I
+chrM	14496	C	1	,	I
+chrM	14497	T	1	,	I
+chrM	14498	A	1	,$	I
+chrM	14866	A	1	^:,	I
+chrM	14867	A	1	,	6
+chrM	14868	A	1	,	I
+chrM	14869	G	1	,	3
+chrM	14870	A	1	,	,
+chrM	14871	C	1	,	'
+chrM	14872	A	1	,	9
+chrM	14873	T	1	,	4
+chrM	14874	C	1	,	I
+chrM	14875	C	1	,	I
+chrM	14876	T	1	,	A
+chrM	14877	A	1	,	I
+chrM	14878	G	1	,	(
+chrM	14879	G	1	,	I
+chrM	14880	A	1	,	A
+chrM	14881	C	1	,	I
+chrM	14882	T	1	,	G
+chrM	14883	C	1	,	I
+chrM	14884	C	1	,	*
+chrM	14885	T	1	,	4
+chrM	14886	C	1	,	I
+chrM	14887	C	1	,	I
+chrM	14888	T	1	,	F
+chrM	14889	C	1	,	I
+chrM	14890	C	1	,	I
+chrM	14891	T	1	,	I
+chrM	14892	G	1	,	I
+chrM	14893	A	1	n	"
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+chrM	14895	C	1	,	I
+chrM	14896	T	1	,	I
+chrM	14897	T	1	,	I
+chrM	14898	G	1	,	I
+chrM	14899	C	1	,	I
+chrM	14900	T	1	,	I
+chrM	14901	C	1	,$	I
+chrM	14956	A	1	^:.	I
+chrM	14957	C	1	.	I
+chrM	14958	C	1	.	I
+chrM	14959	C	1	.	I
+chrM	14960	C	1	.	I
+chrM	14961	A	1	.	I
+chrM	14962	G	1	.	I
+chrM	14963	C	1	N	"
+chrM	14964	T	1	N	"
+chrM	14965	A	1	.	I
+chrM	14966	A	1	.	I
+chrM	14967	C	1	.	I
+chrM	14968	C	1	.	I
+chrM	14969	C	1	.	I
+chrM	14970	T	1	.	I
+chrM	14971	C	1	.	I
+chrM	14972	T	1	.	I
+chrM	14973	C	1	.	I
+chrM	14974	A	1	.	I
+chrM	14975	G	1	.	I
+chrM	14976	C	1	.	I
+chrM	14977	A	1	.	6
+chrM	14978	C	1	.	I
+chrM	14979	T	1	.	I
+chrM	14980	C	1	.	I
+chrM	14981	C	1	.	I
+chrM	14982	C	1	.	I
+chrM	14983	C	1	.	I
+chrM	14984	C	1	.	I
+chrM	14985	T	1	.	I
+chrM	14986	C	1	.	I
+chrM	14987	A	1	.	5
+chrM	14988	T	1	.	I
+chrM	14989	A	1	.	-
+chrM	14990	T	1	.	I
+chrM	14991	T	1	.$	I
+chrM	15012	G	1	^:.	I
+chrM	15013	T	1	.	I
+chrM	15014	T	2	.^:,	II
+chrM	15015	T	2	.,	I8
+chrM	15016	G	2	.,	IA
+chrM	15017	C	2	.,	II
+chrM	15018	C	2	.,	II
+chrM	15019	T	2	N,	":
+chrM	15020	A	2	N,	"I
+chrM	15021	C	2	.,	II
+chrM	15022	G	2	.,	II
+chrM	15023	C	2	.,	II
+chrM	15024	C	2	.,	II
+chrM	15025	A	2	.,	8I
+chrM	15026	T	2	.,	II
+chrM	15027	C	2	.,	II
+chrM	15028	C	2	.,	II
+chrM	15029	T	2	.,	II
+chrM	15030	A	2	.,	II
+chrM	15031	C	2	.,	II
+chrM	15032	G	2	.,	HI
+chrM	15033	C	2	.,	II
+chrM	15034	T	2	.,	II
+chrM	15035	C	2	.,	II
+chrM	15036	C	2	.,	II
+chrM	15037	A	2	.,	6I
+chrM	15038	T	2	.,	II
+chrM	15039	T	2	.,	II
+chrM	15040	C	2	.,	II
+chrM	15041	C	2	.n	I"
+chrM	15042	C	2	.n	I"
+chrM	15043	A	2	.,	1I
+chrM	15044	A	2	.,	CI
+chrM	15045	C	2	.,	II
+chrM	15046	A	2	.,	=I
+chrM	15047	A	2	.$,	3I
+chrM	15048	A	1	,	I
+chrM	15049	C	1	,$	I
+chrM	15080	T	1	^:,	H
+chrM	15081	C	1	,	I
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+chrM	15083	T	1	,	I
+chrM	15084	G	1	,	I
+chrM	15085	A	1	,	I
+chrM	15086	T	1	,	F
+chrM	15087	C	1	,	I
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+chrM	15089	T	1	,	A
+chrM	15090	A	1	,	I
+chrM	15091	G	1	,	H
+chrM	15092	C	1	,	I
+chrM	15093	A	1	,	I
+chrM	15094	C	1	,	I
+chrM	15095	T	1	,	I
+chrM	15096	C	1	,	I
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+chrM	15099	C	1	,	I
+chrM	15100	C	1	,	I
+chrM	15101	C	1	,	I
+chrM	15102	C	1	,	I
+chrM	15103	A	1	,	I
+chrM	15104	C	1	,	I
+chrM	15105	C	1	,	I
+chrM	15106	C	1	,	I
+chrM	15107	T	1	n	"
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+chrM	15109	C	1	,	I
+chrM	15110	A	1	,	I
+chrM	15111	C	1	,	I
+chrM	15112	A	1	,	I
+chrM	15113	T	1	,	I
+chrM	15114	A	1	,	I
+chrM	15115	T	1	,$	I
+chrM	15275	T	1	^:.	I
+chrM	15276	C	1	.	I
+chrM	15277	A	1	.	I
+chrM	15278	T	1	.	I
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+chrM	15280	T	1	.	I
+chrM	15281	T	1	.	I
+chrM	15282	T	1	N	"
+chrM	15283	A	1	N	"
+chrM	15284	T	1	.	I
+chrM	15285	A	1	.	I
+chrM	15286	C	1	.	I
+chrM	15287	C	1	.	I
+chrM	15288	A	1	.	I
+chrM	15289	C	1	.	I
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+chrM	15291	C	1	.	I
+chrM	15292	G	1	.	I
+chrM	15293	C	1	.	I
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+chrM	15296	G	1	.	I
+chrM	15297	C	1	.	I
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+chrM	15300	C	1	.	I
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+chrM	15302	T	1	.	I
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+chrM	15304	G	1	.	I
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+chrM	15306	A	1	.	9
+chrM	15307	A	1	.	I
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+chrM	15309	C	1	.	I
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+chrM	15338	T	1	^:,	E
+chrM	15339	A	1	,	I
+chrM	15340	T	1	,	I
+chrM	15341	A	1	,	I
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diff -r 000000000000 -r 95612c159681 test-data/sam_pileup_out2.pileup
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sam_pileup_out2.pileup	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,3286 @@
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+chrM	1632	G	G	30	0	25	1	.	I
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+chrM	1634	C	C	30	0	25	1	.	I
+chrM	1635	A	A	30	0	25	1	.	C
+chrM	1636	T	T	30	0	25	1	.	I
+chrM	1637	C	C	30	0	25	1	.	I
+chrM	1638	A	A	30	0	25	1	.	=
+chrM	1639	A	A	30	0	25	1	.	G
+chrM	1640	T	T	30	0	25	1	.	I
+chrM	1641	T	T	30	0	25	1	.	I
+chrM	1642	A	A	30	0	25	1	.	I
+chrM	1643	A	A	30	0	25	1	.	I
+chrM	1644	G	G	30	0	25	1	.	I
+chrM	1645	A	A	30	0	25	1	.	@
+chrM	1646	A	A	30	0	25	1	.	I
+chrM	1647	A	A	30	0	25	1	.	G
+chrM	1648	G	G	30	0	25	1	.	I
+chrM	1649	C	C	30	0	25	1	.	I
+chrM	1650	G	G	30	0	25	1	.	I
+chrM	1651	T	T	30	0	25	1	.$	>
+chrM	2261	C	C	30	0	25	1	^:,	E
+chrM	2262	A	A	30	0	25	1	,	I
+chrM	2263	G	G	30	0	25	1	,	I
+chrM	2264	C	C	30	0	25	1	,	I
+chrM	2265	A	A	30	0	25	1	,	G
+chrM	2266	A	A	30	0	25	1	,	I
+chrM	2267	T	T	30	0	25	1	,	2
+chrM	2268	T	T	30	0	25	1	,	=
+chrM	2269	T	T	30	0	25	1	,	3
+chrM	2270	C	C	30	0	25	1	,	I
+chrM	2271	G	G	30	0	25	1	,	I
+chrM	2272	G	G	30	0	25	1	,	I
+chrM	2273	T	T	30	0	25	1	,	I
+chrM	2274	T	T	30	0	25	1	,	I
+chrM	2275	G	G	30	0	25	1	,	I
+chrM	2276	G	G	30	0	25	1	,	I
+chrM	2277	G	G	30	0	25	1	,	I
+chrM	2278	G	G	30	0	25	1	,	I
+chrM	2279	T	T	30	0	25	1	,	I
+chrM	2280	G	G	30	0	25	1	,	I
+chrM	2281	A	A	30	0	25	1	,	I
+chrM	2282	C	C	30	0	25	1	,	I
+chrM	2283	C	C	30	0	25	1	,	I
+chrM	2284	T	T	30	0	25	1	,	I
+chrM	2285	C	C	30	0	25	1	,	I
+chrM	2286	G	G	30	0	25	1	,	I
+chrM	2287	G	G	30	0	25	1	,	I
+chrM	2288	A	N	0	0	0	1	n	"
+chrM	2289	G	N	0	0	0	1	n	"
+chrM	2290	A	A	30	0	25	1	,	I
+chrM	2291	A	A	30	0	25	1	,	I
+chrM	2292	C	C	30	0	25	1	,	I
+chrM	2293	A	A	30	0	25	1	,	E
+chrM	2294	A	A	30	0	25	1	,	B
+chrM	2295	A	A	30	0	25	1	,	@
+chrM	2296	A	A	30	0	25	1	,$	?
+chrM	2334	A	A	30	0	25	1	^:,	;
+chrM	2335	A	A	30	0	25	1	,	;
+chrM	2336	A	A	30	0	25	1	,	>
+chrM	2337	T	T	30	0	25	1	,	I
+chrM	2338	A	A	30	0	25	1	,	I
+chrM	2339	T	T	30	0	25	1	,	H
+chrM	2340	A	A	30	0	25	1	,	I
+chrM	2341	T	T	30	0	25	1	,	=
+chrM	2342	A	A	30	0	25	1	,	I
+chrM	2343	A	A	30	0	25	1	,	I
+chrM	2344	T	T	30	0	25	1	,	C
+chrM	2345	C	C	30	0	25	1	,	I
+chrM	2346	A	A	30	0	25	1	,	I
+chrM	2347	C	C	30	0	25	1	,	I
+chrM	2348	T	T	30	0	25	1	,	?
+chrM	2349	T	T	30	0	25	1	,	I
+chrM	2350	A	A	30	0	25	1	,	I
+chrM	2351	T	T	30	0	25	1	,	I
+chrM	2352	T	T	30	0	25	1	,	I
+chrM	2353	G	G	30	0	25	1	,	I
+chrM	2354	A	A	30	0	25	1	,	I
+chrM	2355	T	T	30	0	25	1	,	D
+chrM	2356	C	C	30	0	25	1	,	I
+chrM	2357	C	C	30	0	25	1	,	I
+chrM	2358	A	A	30	0	25	1	,	I
+chrM	2359	A	A	30	0	25	1	,	I
+chrM	2360	A	A	30	0	25	1	,	I
+chrM	2361	C	N	0	0	0	1	n	"
+chrM	2362	C	N	0	0	0	1	n	"
+chrM	2363	A	A	30	0	25	1	,	I
+chrM	2364	T	T	30	0	25	1	,	I
+chrM	2365	T	T	30	0	25	1	,	I
+chrM	2366	G	G	30	0	25	1	,	I
+chrM	2367	A	A	30	0	25	1	,	I
+chrM	2368	T	T	30	0	25	1	,	I
+chrM	2369	C	C	30	0	25	1	,$	E
+chrM	2389	G	G	30	0	25	1	^:,	A
+chrM	2390	G	G	30	0	25	1	,	8
+chrM	2391	G	G	30	0	25	1	,	E
+chrM	2392	A	A	30	0	25	1	,	I
+chrM	2393	T	T	30	0	25	1	,	I
+chrM	2394	A	A	30	0	25	1	,	I
+chrM	2395	A	A	30	0	25	1	,	I
+chrM	2396	C	C	30	0	25	1	,	8
+chrM	2397	A	A	30	0	25	1	,	I
+chrM	2398	G	G	30	0	25	1	,	I
+chrM	2399	C	C	30	0	25	1	,	I
+chrM	2400	G	G	30	0	25	1	,	I
+chrM	2401	C	C	30	0	25	1	,	I
+chrM	2402	A	A	30	0	25	1	,	I
+chrM	2403	A	A	30	0	25	1	,	I
+chrM	2404	T	T	30	0	25	1	,	I
+chrM	2405	C	C	30	0	25	1	,	I
+chrM	2406	C	C	30	0	25	1	,	I
+chrM	2407	T	T	30	0	25	1	,	G
+chrM	2408	A	A	30	0	25	1	,	I
+chrM	2409	T	T	30	0	25	1	,	I
+chrM	2410	T	T	30	0	25	1	,	B
+chrM	2411	C	C	30	0	25	1	,	I
+chrM	2412	C	C	30	0	25	1	,	I
+chrM	2413	A	A	30	0	25	1	,	I
+chrM	2414	G	G	30	0	25	1	,	I
+chrM	2415	A	A	30	0	25	1	,	I
+chrM	2416	G	N	0	0	0	1	n	"
+chrM	2417	T	N	0	0	0	1	n	"
+chrM	2418	C	C	30	0	25	1	,	I
+chrM	2419	C	C	30	0	25	1	,	I
+chrM	2420	A	A	30	0	25	1	,	I
+chrM	2421	T	T	30	0	25	1	,	I
+chrM	2422	A	A	30	0	25	1	,	I
+chrM	2423	T	T	30	0	25	1	,	I
+chrM	2424	C	C	30	0	25	1	,$	E
+chrM	2735	t	T	30	0	25	1	^:,	A
+chrM	2736	t	T	30	0	25	1	,	9
+chrM	2737	t	T	30	0	25	1	,	E
+chrM	2738	a	A	30	0	25	1	,	I
+chrM	2739	c	C	30	0	25	1	,	I
+chrM	2740	a	A	30	0	25	1	,	I
+chrM	2741	c	C	30	0	25	1	,	I
+chrM	2742	t	T	30	0	25	1	,	5
+chrM	2743	c	C	30	0	25	1	,	I
+chrM	2744	a	A	30	0	25	1	,	I
+chrM	2745	g	G	30	0	25	1	,	I
+chrM	2746	a	A	30	0	25	1	,	I
+chrM	2747	g	G	30	0	25	1	,	I
+chrM	2748	g	G	30	0	25	1	,	I
+chrM	2749	t	T	30	0	25	1	,	I
+chrM	2750	t	T	30	0	25	1	,	I
+chrM	2751	c	C	30	0	25	1	,	I
+chrM	2752	a	A	30	0	25	1	,	I
+chrM	2753	a	A	30	0	25	1	,	I
+chrM	2754	c	C	30	0	25	1	,	I
+chrM	2755	t	T	30	0	25	1	,	I
+chrM	2756	c	C	30	0	25	1	,	I
+chrM	2757	c	C	30	0	25	1	,	I
+chrM	2758	t	T	30	0	25	1	,	I
+chrM	2759	c	C	30	0	25	1	,	I
+chrM	2760	t	T	30	0	25	1	,	I
+chrM	2761	c	C	30	0	25	1	,	I
+chrM	2762	c	N	0	0	0	1	n	"
+chrM	2763	c	N	0	0	0	1	n	"
+chrM	2764	t	T	30	0	25	1	,	I
+chrM	2765	a	A	30	0	25	1	,	I
+chrM	2766	a	A	30	0	25	1	,	I
+chrM	2767	c	C	30	0	25	1	,	I
+chrM	2768	a	A	30	0	25	1	,	I
+chrM	2769	a	A	30	0	25	1	,	I
+chrM	2770	c	C	30	0	25	1	,$	E
+chrM	2844	G	G	30	0	25	1	^:.	E
+chrM	2845	A	A	30	0	25	1	.	I
+chrM	2846	A	A	30	0	25	1	.	I
+chrM	2847	A	A	30	0	25	1	.	I
+chrM	2848	A	A	30	0	25	1	.	I
+chrM	2849	G	G	30	0	25	1	.	I
+chrM	2850	T	T	30	0	25	1	.	I
+chrM	2851	C	N	0	0	0	1	N	"
+chrM	2852	T	N	0	0	0	1	N	"
+chrM	2853	T	T	30	0	25	1	.	I
+chrM	2854	A	A	30	0	25	1	.	I
+chrM	2855	G	G	30	0	25	1	.	I
+chrM	2856	G	G	30	0	25	1	.	I
+chrM	2857	C	C	30	0	25	1	.	I
+chrM	2858	T	T	30	0	25	1	.	I
+chrM	2859	A	A	30	0	25	1	.	I
+chrM	2860	T	T	30	0	25	1	.	I
+chrM	2861	A	A	30	0	25	1	.	B
+chrM	2862	T	T	30	0	25	1	.	I
+chrM	2863	G	G	30	0	25	1	.	I
+chrM	2864	C	C	30	0	25	1	.	I
+chrM	2865	A	A	30	0	25	1	.	I
+chrM	2866	A	A	30	0	25	1	.	B
+chrM	2867	C	C	30	0	25	1	.	I
+chrM	2868	T	T	30	0	25	1	.	I
+chrM	2869	T	T	30	0	25	1	.	I
+chrM	2870	C	C	30	0	25	1	.	I
+chrM	2871	G	G	30	0	25	1	.	=
+chrM	2872	C	C	30	0	25	1	.	I
+chrM	2873	A	A	30	0	25	1	.	@
+chrM	2874	A	A	30	0	25	1	.	9
+chrM	2875	A	A	30	0	25	1	.	6
+chrM	2876	G	G	30	0	25	1	.	D
+chrM	2877	G	G	30	0	25	1	.	2
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+chrM	2879	C	C	30	0	25	1	.$	>
+chrM	3080	T	T	30	0	25	1	^:.	B
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+chrM	3082	C	C	30	0	25	1	.	I
+chrM	3083	A	A	30	0	25	1	.	I
+chrM	3084	T	T	30	0	25	1	.	I
+chrM	3085	A	A	30	0	25	1	.	I
+chrM	3086	C	C	30	0	25	1	.	I
+chrM	3087	T	N	0	0	0	1	N	"
+chrM	3088	A	N	0	0	0	1	N	"
+chrM	3089	G	G	30	0	25	1	.	I
+chrM	3090	C	C	30	0	25	1	.	I
+chrM	3091	C	C	30	0	25	1	.	I
+chrM	3092	A	A	30	0	25	1	.	I
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+chrM	3094	G	G	30	0	25	1	.	I
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+chrM	3096	C	C	30	0	25	1	.	I
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+chrM	3098	A	A	30	0	25	1	.	I
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+chrM	3100	C	C	30	0	25	1	.	I
+chrM	3101	C	C	30	0	25	1	.	I
+chrM	3102	T	T	30	0	25	1	.	I
+chrM	3103	A	A	30	0	25	1	.	I
+chrM	3104	G	G	30	0	25	1	.	I
+chrM	3105	C	C	30	0	25	1	.	I
+chrM	3106	T	T	30	0	25	1	.	I
+chrM	3107	G	G	30	0	25	1	.	I
+chrM	3108	T	T	30	0	25	1	.	I
+chrM	3109	C	C	30	0	25	1	.	I
+chrM	3110	T	T	30	0	25	1	.	I
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+chrM	3112	C	C	30	0	25	1	.	I
+chrM	3113	T	T	30	0	25	1	.	I
+chrM	3114	C	C	30	0	25	1	.	I
+chrM	3115	A	A	30	0	25	1	.$	>
+chrM	3188	A	A	30	0	25	1	^:,	E
+chrM	3189	T	T	30	0	25	1	,	=
+chrM	3190	C	C	30	0	25	1	,	I
+chrM	3191	T	T	30	0	25	1	,	I
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+chrM	3193	A	A	30	0	25	1	,	I
+chrM	3194	T	T	30	0	25	1	,	I
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+chrM	3196	C	C	30	0	25	1	,	I
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+chrM	3198	A	A	30	0	25	1	,	I
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+chrM	3200	G	G	30	0	25	1	,	I
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+chrM	3202	A	A	30	0	25	1	,	I
+chrM	3203	A	A	30	0	25	1	,	I
+chrM	3204	C	C	30	0	25	1	,	I
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+chrM	3206	C	C	30	0	25	1	,	I
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+chrM	3208	A	A	30	0	25	1	,	I
+chrM	3209	G	G	30	0	25	1	,	I
+chrM	3210	C	C	30	0	25	1	,	I
+chrM	3211	A	A	30	0	25	1	,	I
+chrM	3212	A	A	30	0	25	1	,	I
+chrM	3213	T	T	30	0	25	1	,	I
+chrM	3214	C	C	30	0	25	1	,	I
+chrM	3215	A	N	0	0	0	1	n	"
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+chrM	3217	C	C	30	0	25	1	,	I
+chrM	3218	C	C	30	0	25	1	,	I
+chrM	3219	T	T	30	0	25	1	,	I
+chrM	3220	A	A	30	0	25	1	,	I
+chrM	3221	C	C	30	0	25	1	,	I
+chrM	3222	T	T	30	0	25	1	,	F
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+chrM	3502	A	A	30	0	25	1	^:.	E
+chrM	3503	G	G	30	0	25	1	.	I
+chrM	3504	C	C	30	0	25	1	.	I
+chrM	3505	A	A	30	0	25	1	.	I
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+chrM	3507	T	T	30	0	25	1	.	I
+chrM	3508	T	T	30	0	25	1	.	I
+chrM	3509	C	N	0	0	0	1	N	"
+chrM	3510	A	N	0	0	0	1	N	"
+chrM	3511	C	C	30	0	25	1	.	I
+chrM	3512	A	A	30	0	25	1	.	I
+chrM	3513	A	A	30	0	25	1	.	I
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+chrM	3516	C	C	30	0	25	1	.	I
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+chrM	3530	C	C	30	0	25	1	.	I
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+chrM	3678	G	G	30	0	25	1	^:.	E
+chrM	3679	A	A	30	0	25	1	.	I
+chrM	3680	C	C	30	0	25	1	.	I
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+chrM	3683	G	G	30	0	25	1	.	I
+chrM	3684	T	T	30	0	25	1	.	I
+chrM	3685	C	N	0	0	0	1	N	"
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+chrM	3687	C	C	30	0	25	1	.	I
+chrM	3688	A	A	30	0	25	1	.	I
+chrM	3689	C	C	30	0	25	1	.	I
+chrM	3690	T	T	30	0	25	1	.	I
+chrM	3691	T	T	30	0	25	1	.	I
+chrM	3692	C	C	30	0	25	1	.	I
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+chrM	3696	T	T	30	0	25	1	.	I
+chrM	3697	C	C	30	0	25	1	.	I
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+chrM	3699	T	T	30	0	25	1	.	I
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+chrM	3701	C	C	30	0	25	1	.	I
+chrM	3702	T	T	30	0	25	1	.	I
+chrM	3703	A	A	30	0	25	1	.	E
+chrM	3704	T	T	30	0	25	1	.	I
+chrM	3705	C	C	30	0	25	1	.	I
+chrM	3706	C	C	30	0	25	1	.	I
+chrM	3707	A	A	30	0	25	1	.	I
+chrM	3708	G	N	0	0	0	1	.	-
+chrM	3709	C	C	30	0	25	1	.	I
+chrM	3710	A	A	30	0	25	1	.	A
+chrM	3711	T	T	30	0	25	1	.	I
+chrM	3712	C	C	30	0	25	1	.	>
+chrM	3713	C	C	30	0	25	1	.$	;
+chrM	3753	T	T	30	0	25	1	^:.	A
+chrM	3754	T	T	30	0	25	1	.	B
+chrM	3755	T	T	30	0	25	1	.	E
+chrM	3756	G	G	30	0	25	1	.	I
+chrM	3757	A	A	30	0	25	1	.	I
+chrM	3758	T	T	30	0	25	1	.	I
+chrM	3759	A	A	30	0	25	1	.	I
+chrM	3760	G	N	0	0	0	1	N	"
+chrM	3761	A	N	0	0	0	1	N	"
+chrM	3762	G	G	30	0	25	1	.	I
+chrM	3763	T	T	30	0	25	1	.	I
+chrM	3764	A	A	30	0	25	1	.	I
+chrM	3765	A	A	30	0	25	1	.	I
+chrM	3766	A	A	30	0	25	1	.	I
+chrM	3767	A	A	30	0	25	1	.	I
+chrM	3768	C	C	30	0	25	1	.	I
+chrM	3769	A	A	30	0	25	1	.	I
+chrM	3770	T	T	30	0	25	1	.	I
+chrM	3771	A	A	30	0	25	1	.	I
+chrM	3772	G	G	30	0	25	1	.	I
+chrM	3773	A	A	30	0	25	1	.	I
+chrM	3774	G	G	30	0	25	1	.	I
+chrM	3775	G	G	30	0	25	1	.	I
+chrM	3776	C	C	30	0	25	1	.	I
+chrM	3777	T	T	30	0	25	1	.	I
+chrM	3778	C	C	30	0	25	1	.	I
+chrM	3779	A	A	30	0	25	1	.	C
+chrM	3780	A	A	30	0	25	1	.	I
+chrM	3781	A	A	30	0	25	1	.	I
+chrM	3782	C	C	30	0	25	1	.	I
+chrM	3783	C	C	30	0	25	1	.	I
+chrM	3784	C	C	30	0	25	1	.	I
+chrM	3785	T	T	30	0	25	1	.	I
+chrM	3786	C	C	30	0	25	1	.	I
+chrM	3787	T	T	30	0	25	1	.	E
+chrM	3788	T	T	30	0	25	1	.$	A
+chrM	3841	t	T	30	0	25	1	^:,	E
+chrM	3842	g	G	30	0	25	1	,	I
+chrM	3843	c	N	0	0	0	1	,	+
+chrM	3844	t	T	30	0	25	1	,	I
+chrM	3845	a	A	30	0	25	1	,	I
+chrM	3846	c	N	0	0	0	1	,	%
+chrM	3847	c	N	0	0	0	1	,	(
+chrM	3848	g	G	30	0	25	1	,	I
+chrM	3849	a	A	30	0	25	1	,	I
+chrM	3850	a	A	30	0	25	1	,	I
+chrM	3851	t	T	30	0	25	1	,	I
+chrM	3852	t	T	30	0	25	1	,	I
+chrM	3853	a	A	30	0	25	1	,	I
+chrM	3854	c	C	30	0	25	1	,	I
+chrM	3855	a	A	30	0	25	1	,	I
+chrM	3856	c	C	30	0	25	1	,	I
+chrM	3857	c	C	30	0	25	1	,	I
+chrM	3858	a	A	30	0	25	1	,	I
+chrM	3859	t	T	30	0	25	1	,	I
+chrM	3860	g	G	30	0	25	1	,	I
+chrM	3861	t	T	30	0	25	1	,	I
+chrM	3862	c	C	30	0	25	1	,	I
+chrM	3863	c	C	30	0	25	1	,	I
+chrM	3864	t	T	30	0	25	1	,	I
+chrM	3865	a	A	30	0	25	1	,	I
+chrM	3866	C	C	30	0	25	1	,	I
+chrM	3867	A	A	30	0	25	1	,	I
+chrM	3868	A	N	0	0	0	1	n	"
+chrM	3869	G	N	0	0	0	1	n	"
+chrM	3870	T	T	30	0	25	1	,	I
+chrM	3871	A	A	30	0	25	1	,	I
+chrM	3872	A	A	30	0	25	1	,	I
+chrM	3873	G	G	30	0	25	1	,	I
+chrM	3874	G	G	30	0	25	1	,	I
+chrM	3875	T	T	30	0	25	1	,	I
+chrM	3876	C	C	30	0	25	1	,$	E
+chrM	3921	C	C	30	0	25	1	^:,	E
+chrM	3922	A	A	30	0	25	1	,	I
+chrM	3923	C	C	30	0	25	1	,	I
+chrM	3924	C	C	30	0	25	1	,	I
+chrM	3925	C	C	30	0	25	1	,	I
+chrM	3926	T	T	30	0	25	1	,	=
+chrM	3927	T	T	30	0	25	1	,	A
+chrM	3928	C	C	30	0	25	1	,	I
+chrM	3929	C	C	30	0	25	1	,	I
+chrM	3930	C	C	30	0	25	1	,	I
+chrM	3931	G	G	30	0	25	1	,	I
+chrM	3932	T	T	30	0	25	1	,	I
+chrM	3933	A	A	30	0	25	1	,	I
+chrM	3934	C	C	30	0	25	1	,	I
+chrM	3935	T	T	30	0	25	1	,	I
+chrM	3936	A	A	30	0	25	1	,	I
+chrM	3937	A	A	30	0	25	1	,	I
+chrM	3938	T	T	30	0	25	1	,	I
+chrM	3939	A	A	30	0	25	1	,	I
+chrM	3940	A	A	30	0	25	1	,	I
+chrM	3941	A	A	30	0	25	1	,	I
+chrM	3942	T	T	30	0	25	1	,	B
+chrM	3943	C	C	30	0	25	1	,	I
+chrM	3944	C	C	30	0	25	1	,	I
+chrM	3945	C	C	30	0	25	1	,	I
+chrM	3946	C	C	30	0	25	1	,	I
+chrM	3947	T	T	30	0	25	1	,	I
+chrM	3948	T	N	0	0	0	1	n	"
+chrM	3949	A	N	0	0	0	1	n	"
+chrM	3950	T	T	30	0	25	1	,	I
+chrM	3951	C	C	30	0	25	1	,	I
+chrM	3952	T	T	30	0	25	1	,	I
+chrM	3953	T	T	30	0	25	1	,	I
+chrM	3954	C	C	30	0	25	1	,	I
+chrM	3955	A	A	30	0	25	1	,	I
+chrM	3956	C	C	30	0	25	1	,$	E
+chrM	4249	A	A	30	0	25	1	^:,	;
+chrM	4250	A	A	30	0	25	1	,	;
+chrM	4251	A	A	30	0	25	1	,	>
+chrM	4252	C	C	30	0	25	1	,	I
+chrM	4253	T	T	30	0	25	1	,	5
+chrM	4254	T	T	30	0	25	1	,	6
+chrM	4255	G	G	30	0	25	1	,	I
+chrM	4256	G	G	30	0	25	1	,	I
+chrM	4257	A	A	30	0	25	1	,	I
+chrM	4258	C	C	30	0	25	1	,	I
+chrM	4259	T	T	30	0	25	1	,	I
+chrM	4260	C	C	30	0	25	1	,	I
+chrM	4261	A	A	30	0	25	1	,	I
+chrM	4262	C	C	30	0	25	1	,	I
+chrM	4263	A	A	30	0	25	1	,	I
+chrM	4264	C	C	30	0	25	1	,	I
+chrM	4265	C	C	30	0	25	1	,	I
+chrM	4266	A	A	30	0	25	1	,	I
+chrM	4267	T	T	30	0	25	1	,	I
+chrM	4268	T	T	30	0	25	1	,	I
+chrM	4269	C	C	30	0	25	1	,	I
+chrM	4270	C	C	30	0	25	1	,	I
+chrM	4271	A	A	30	0	25	1	,	I
+chrM	4272	C	C	30	0	25	1	,	I
+chrM	4273	T	T	30	0	25	1	,	I
+chrM	4274	T	T	30	0	25	1	,	I
+chrM	4275	C	C	30	0	25	1	,	I
+chrM	4276	T	N	0	0	0	1	n	"
+chrM	4277	G	N	0	0	0	1	n	"
+chrM	4278	A	A	30	0	25	1	,	I
+chrM	4279	G	G	30	0	25	1	,	I
+chrM	4280	T	T	30	0	25	1	,	I
+chrM	4281	A	A	30	0	25	1	,	I
+chrM	4282	C	C	30	0	25	1	,	E
+chrM	4283	C	C	30	0	25	1	,	B
+chrM	4284	C	C	30	0	25	1	,$	@
+chrM	4552	T	T	30	0	25	1	^:.	B
+chrM	4553	T	T	30	0	25	1	.	E
+chrM	4554	A	A	30	0	25	1	.	I
+chrM	4555	A	A	30	0	25	1	.	I
+chrM	4556	T	T	30	0	25	1	.	I
+chrM	4557	T	T	30	0	25	1	.	I
+chrM	4558	T	T	30	0	25	1	.	I
+chrM	4559	A	N	0	0	0	1	N	"
+chrM	4560	C	N	0	0	0	1	N	"
+chrM	4561	A	A	30	0	25	1	.	I
+chrM	4562	T	T	30	0	25	1	.	I
+chrM	4563	T	T	30	0	25	1	.	I
+chrM	4564	A	A	30	0	25	1	.	I
+chrM	4565	T	T	30	0	25	1	.	I
+chrM	4566	A	A	30	0	25	1	.	I
+chrM	4567	A	A	30	0	25	1	.	I
+chrM	4568	T	T	30	0	25	1	.	I
+chrM	4569	A	A	30	0	25	1	.	I
+chrM	4570	A	A	30	0	25	1	.	I
+chrM	4571	C	C	30	0	25	1	.	I
+chrM	4572	A	A	30	0	25	1	.	I
+chrM	4573	C	C	30	0	25	1	.	I
+chrM	4574	T	T	30	0	25	1	.	I
+chrM	4575	C	C	30	0	25	1	.	I
+chrM	4576	A	A	30	0	25	1	.	I
+chrM	4577	C	C	30	0	25	1	.	I
+chrM	4578	A	A	30	0	25	1	.	I
+chrM	4579	A	A	30	0	25	1	.	?
+chrM	4580	T	T	30	0	25	1	.	I
+chrM	4581	A	A	30	0	25	1	.	6
+chrM	4582	T	T	30	0	25	1	.	I
+chrM	4583	T	T	30	0	25	1	.	I
+chrM	4584	C	C	30	0	25	1	.	I
+chrM	4585	A	A	30	0	25	1	.	I
+chrM	4586	T	T	30	0	25	1	.	I
+chrM	4587	A	A	30	0	25	1	.$	6
+chrM	4697	T	T	30	0	25	1	^:,	5
+chrM	4698	C	C	30	0	25	1	,	=
+chrM	4699	C	C	30	0	25	1	,	4
+chrM	4700	C	N	0	0	0	1	,	&
+chrM	4701	C	C	30	0	25	1	,	G
+chrM	4702	C	C	30	0	25	1	,	1
+chrM	4703	C	C	30	0	25	1	,	3
+chrM	4704	A	A	30	0	25	1	,	I
+chrM	4705	C	C	30	0	25	1	,	.
+chrM	4706	T	T	30	0	25	1	,	?
+chrM	4707	A	A	30	0	25	1	,	I
+chrM	4708	T	T	30	0	25	1	,	I
+chrM	4709	C	C	30	0	25	1	,	I
+chrM	4710	A	A	30	0	25	1	,	I
+chrM	4711	G	G	30	0	25	1	,	I
+chrM	4712	G	G	30	0	25	1	,	I
+chrM	4713	A	A	30	0	25	1	,	I
+chrM	4714	T	T	30	0	25	1	,	I
+chrM	4715	T	T	30	0	25	1	,	I
+chrM	4716	C	C	30	0	25	1	,	I
+chrM	4717	A	A	30	0	25	1	,	I
+chrM	4718	T	T	30	0	25	1	,	I
+chrM	4719	A	A	30	0	25	1	,	I
+chrM	4720	C	C	30	0	25	1	,	I
+chrM	4721	C	C	30	0	25	1	,	I
+chrM	4722	C	C	30	0	25	1	,	I
+chrM	4723	A	A	30	0	25	1	,	I
+chrM	4724	A	N	0	0	0	1	n	"
+chrM	4725	A	N	0	0	0	1	n	"
+chrM	4726	T	T	30	0	25	1	,	I
+chrM	4727	G	G	30	0	25	1	,	I
+chrM	4728	A	A	30	0	25	1	,	I
+chrM	4729	A	A	30	0	25	1	,	I
+chrM	4730	T	T	30	0	25	1	,	I
+chrM	4731	A	A	30	0	25	1	,	E
+chrM	4732	A	A	30	0	25	1	,$	B
+chrM	4742	A	A	30	0	25	1	^:.	D
+chrM	4743	G	G	30	0	25	1	.	I
+chrM	4744	C	C	30	0	25	1	.	I
+chrM	4745	T	T	30	0	25	1	.	I
+chrM	4746	C	C	30	0	25	1	.	I
+chrM	4747	A	A	30	0	25	1	.	I
+chrM	4748	C	C	30	0	25	1	.	I
+chrM	4749	C	N	0	0	0	1	N	"
+chrM	4750	A	N	0	0	0	1	N	"
+chrM	4751	A	A	30	0	25	1	.	I
+chrM	4752	A	A	30	0	25	1	.	I
+chrM	4753	A	A	30	0	25	1	.	I
+chrM	4754	A	A	30	0	25	1	.	I
+chrM	4755	T	T	30	0	25	1	.	I
+chrM	4756	A	A	30	0	25	1	.	I
+chrM	4757	G	G	30	0	25	1	.	I
+chrM	4758	C	C	30	0	25	1	.	I
+chrM	4759	A	A	30	0	25	1	.	I
+chrM	4760	G	G	30	0	25	1	.	I
+chrM	4761	C	C	30	0	25	1	.	I
+chrM	4762	A	A	30	0	25	1	.	I
+chrM	4763	T	T	30	0	25	1	.	I
+chrM	4764	C	C	30	0	25	1	.	I
+chrM	4765	A	A	30	0	25	1	.	I
+chrM	4766	T	T	30	0	25	1	.	I
+chrM	4767	C	C	30	0	25	1	.	I
+chrM	4768	C	C	30	0	25	1	.	I
+chrM	4769	T	T	30	0	25	1	.	I
+chrM	4770	C	C	30	0	25	1	.	I
+chrM	4771	C	C	30	0	25	1	.	I
+chrM	4772	C	C	30	0	25	1	.	I
+chrM	4773	C	C	30	0	25	1	.	I
+chrM	4774	A	A	30	0	25	1	.	8
+chrM	4775	C	C	30	0	25	1	.	I
+chrM	4776	A	A	30	0	25	1	.	:
+chrM	4777	C	C	30	0	25	1	.$	E
+chrM	4932	C	C	30	0	25	1	^:,	E
+chrM	4933	T	N	0	0	0	1	,	-
+chrM	4934	C	C	30	0	25	1	,	A
+chrM	4935	C	C	30	0	25	1	,	I
+chrM	4936	C	C	30	0	25	1	,	I
+chrM	4937	T	T	30	0	25	1	,	7
+chrM	4938	A	A	30	0	25	1	,	I
+chrM	4939	C	C	30	0	25	1	,	I
+chrM	4940	T	T	30	0	25	1	,	5
+chrM	4941	C	C	30	0	25	1	,	I
+chrM	4942	C	C	30	0	25	1	,	I
+chrM	4943	T	T	30	0	25	1	,	:
+chrM	4944	C	C	30	0	25	1	,	I
+chrM	4945	C	C	30	0	25	1	,	I
+chrM	4946	C	C	30	0	25	1	,	I
+chrM	4947	C	C	30	0	25	1	,	I
+chrM	4948	C	C	30	0	25	1	,	I
+chrM	4949	T	T	30	0	25	1	,	I
+chrM	4950	A	A	30	0	25	1	,	I
+chrM	4951	A	A	30	0	25	1	,	I
+chrM	4952	C	C	30	0	25	1	,	I
+chrM	4953	C	C	30	0	25	1	,	I
+chrM	4954	C	C	30	0	25	1	,	I
+chrM	4955	C	C	30	0	25	1	,	I
+chrM	4956	C	C	30	0	25	1	,	I
+chrM	4957	A	A	30	0	25	1	,	I
+chrM	4958	T	T	30	0	25	1	,	I
+chrM	4959	A	N	0	0	0	1	n	"
+chrM	4960	C	N	0	0	0	1	n	"
+chrM	4961	T	T	30	0	25	1	,	I
+chrM	4962	A	A	30	0	25	1	,	I
+chrM	4963	T	T	30	0	25	1	,	I
+chrM	4964	C	C	30	0	25	1	,	I
+chrM	4965	A	A	30	0	25	1	,	I
+chrM	4966	A	A	30	0	25	1	,	I
+chrM	4967	T	T	30	0	25	1	,$	>
+chrM	5155	G	G	30	0	25	1	^:,	7
+chrM	5156	T	T	30	0	25	1	,	I
+chrM	5157	T	T	30	0	25	1	,	I
+chrM	5158	A	A	30	0	25	1	,	I
+chrM	5159	A	A	30	0	25	1	,	I
+chrM	5160	C	C	30	0	25	1	,	I
+chrM	5161	A	A	30	0	25	1	,	I
+chrM	5162	G	G	30	0	25	1	,	I
+chrM	5163	C	C	30	0	25	1	,	I
+chrM	5164	T	T	30	0	25	1	,	I
+chrM	5165	A	A	30	0	25	1	,	I
+chrM	5166	A	A	30	0	25	1	,	I
+chrM	5167	A	A	30	0	25	1	,	I
+chrM	5168	T	T	30	0	25	1	,	I
+chrM	5169	A	A	30	0	25	1	,	I
+chrM	5170	C	C	30	0	25	1	,	I
+chrM	5171	C	C	30	0	25	1	,	I
+chrM	5172	C	C	30	0	25	1	,	I
+chrM	5173	T	T	30	0	25	1	,	I
+chrM	5174	A	A	30	0	25	1	,	I
+chrM	5175	A	A	30	0	25	1	,	I
+chrM	5176	T	T	30	0	25	1	,	I
+chrM	5177	C	C	30	0	25	1	,	I
+chrM	5178	A	A	30	0	25	1	,	I
+chrM	5179	A	A	30	0	25	1	,	I
+chrM	5180	C	C	30	0	25	1	,	I
+chrM	5181	T	T	30	0	25	1	,	I
+chrM	5182	G	N	0	0	0	1	n	"
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+chrM	5184	C	C	30	0	25	1	,	I
+chrM	5185	T	T	30	0	25	1	,	I
+chrM	5186	T	T	30	0	25	1	,	I
+chrM	5187	C	C	30	0	25	1	,	I
+chrM	5188	A	A	30	0	25	1	,	I
+chrM	5189	A	A	30	0	25	1	,	I
+chrM	5190	T	T	30	0	25	1	,$	D
+chrM	5309	T	T	30	0	25	1	^:,	E
+chrM	5310	C	C	30	0	25	1	,	I
+chrM	5311	C	C	30	0	25	1	,	I
+chrM	5312	A	A	30	0	25	1	,	I
+chrM	5313	A	A	30	0	25	1	,	I
+chrM	5314	C	C	30	0	25	1	,	I
+chrM	5315	C	C	30	0	25	1	,	I
+chrM	5316	C	C	30	0	25	1	,	I
+chrM	5317	C	C	30	0	25	1	,	I
+chrM	5318	T	T	30	0	25	1	,	I
+chrM	5319	G	G	30	0	25	1	,	I
+chrM	5320	T	T	30	0	25	1	,	I
+chrM	5321	C	C	30	0	25	1	,	I
+chrM	5322	T	T	30	0	25	1	,	I
+chrM	5323	T	T	30	0	25	1	,	I
+chrM	5324	T	T	30	0	25	1	,	I
+chrM	5325	A	A	30	0	25	1	,	I
+chrM	5326	G	G	30	0	25	1	,	I
+chrM	5327	A	A	30	0	25	1	,	I
+chrM	5328	T	T	30	0	25	1	,	I
+chrM	5329	T	T	30	0	25	1	,	I
+chrM	5330	T	T	30	0	25	1	,	I
+chrM	5331	A	A	30	0	25	1	,	I
+chrM	5332	C	C	30	0	25	1	,	I
+chrM	5333	A	A	30	0	25	1	,	I
+chrM	5334	G	G	30	0	25	1	,	I
+chrM	5335	T	T	30	0	25	1	,	I
+chrM	5336	C	N	0	0	0	1	n	"
+chrM	5337	T	N	0	0	0	1	n	"
+chrM	5338	A	A	30	0	25	1	,	I
+chrM	5339	A	A	30	0	25	1	,	I
+chrM	5340	T	T	30	0	25	1	,	I
+chrM	5341	G	G	30	0	25	1	,	I
+chrM	5342	C	C	30	0	25	1	,	I
+chrM	5343	T	T	30	0	25	1	,	E
+chrM	5344	T	T	30	0	25	1	,$	B
+chrM	5540	C	C	30	0	25	1	^:,	?
+chrM	5541	C	C	30	0	25	1	,	:
+chrM	5542	C	C	30	0	25	1	,	;
+chrM	5543	A	A	30	0	25	1	,	I
+chrM	5544	T	T	30	0	25	1	,	9
+chrM	5545	G	G	30	0	25	1	,	D
+chrM	5546	C	C	30	0	25	1	,	D
+chrM	5547	A	A	30	0	25	1	,	I
+chrM	5548	T	T	30	0	25	1	,	B
+chrM	5549	T	T	30	0	25	1	,	E
+chrM	5550	C	C	30	0	25	1	,	I
+chrM	5551	G	G	30	0	25	1	,	I
+chrM	5552	T	T	30	0	25	1	,	I
+chrM	5553	A	A	30	0	25	1	,	I
+chrM	5554	A	A	30	0	25	1	,	I
+chrM	5555	T	T	30	0	25	1	,	I
+chrM	5556	A	A	30	0	25	1	,	I
+chrM	5557	A	A	30	0	25	1	,	I
+chrM	5558	T	T	30	0	25	1	,	E
+chrM	5559	T	T	30	0	25	1	,	I
+chrM	5560	T	T	30	0	25	1	,	E
+chrM	5561	T	T	30	0	25	1	,	I
+chrM	5562	C	C	30	0	25	1	,	I
+chrM	5563	T	T	30	0	25	1	,	I
+chrM	5564	T	T	30	0	25	1	,	I
+chrM	5565	T	T	30	0	25	1	,	I
+chrM	5566	A	A	30	0	25	1	,	I
+chrM	5567	T	N	0	0	0	1	n	"
+chrM	5568	G	N	0	0	0	1	n	"
+chrM	5569	G	G	30	0	25	1	,	I
+chrM	5570	T	T	30	0	25	1	,	I
+chrM	5571	C	C	30	0	25	1	,	I
+chrM	5572	A	A	30	0	25	1	,	I
+chrM	5573	T	T	30	0	25	1	,	I
+chrM	5574	A	A	30	0	25	1	,	I
+chrM	5575	C	C	30	0	25	1	,$	>
+chrM	6016	T	T	30	0	25	1	^:,	>
+chrM	6017	T	T	30	0	25	1	,	7
+chrM	6018	C	C	30	0	25	1	,	I
+chrM	6019	T	T	30	0	25	1	,	<
+chrM	6020	T	T	30	0	25	1	,	?
+chrM	6021	C	C	30	0	25	1	,	I
+chrM	6022	G	G	30	0	25	1	,	I
+chrM	6023	A	A	30	0	25	1	,	I
+chrM	6024	C	C	30	0	25	1	,	I
+chrM	6025	C	C	30	0	25	1	,	I
+chrM	6026	C	C	30	0	25	1	,	I
+chrM	6027	C	C	30	0	25	1	,	I
+chrM	6028	G	G	30	0	25	1	,	I
+chrM	6029	C	C	30	0	25	1	,	I
+chrM	6030	A	A	30	0	25	1	,	I
+chrM	6031	G	G	30	0	25	1	,	I
+chrM	6032	G	G	30	0	25	1	,	I
+chrM	6033	A	A	30	0	25	1	,	I
+chrM	6034	G	G	30	0	25	1	,	I
+chrM	6035	G	G	30	0	25	1	,	I
+chrM	6036	A	A	30	0	25	1	,	I
+chrM	6037	G	G	30	0	25	1	,	I
+chrM	6038	G	G	30	0	25	1	,	I
+chrM	6039	G	G	30	0	25	1	,	I
+chrM	6040	G	G	33	0	25	2	,^:.	IE
+chrM	6041	A	A	33	0	25	2	,.	II
+chrM	6042	T	T	33	0	25	2	,.	II
+chrM	6043	C	C	30	0	25	2	n.	"I
+chrM	6044	C	C	30	0	25	2	n.	"I
+chrM	6045	A	A	33	0	25	2	,.	II
+chrM	6046	A	A	33	0	25	2	,.	II
+chrM	6047	T	T	30	0	25	2	,N	I"
+chrM	6048	C	C	30	0	25	2	,N	I"
+chrM	6049	C	C	33	0	25	2	,.	II
+chrM	6050	T	T	33	0	25	2	,.	>I
+chrM	6051	T	T	33	0	25	2	,$.	;I
+chrM	6052	T	T	30	0	25	1	.	I
+chrM	6053	A	A	33	0	25	2	.^:.	IE
+chrM	6054	T	T	33	0	25	2	..	II
+chrM	6055	C	C	33	0	25	2	..	II
+chrM	6056	A	A	33	0	25	2	..	II
+chrM	6057	A	A	33	0	25	2	..	II
+chrM	6058	C	C	33	0	25	2	..	II
+chrM	6059	A	A	33	0	25	2	..	II
+chrM	6060	C	C	30	0	25	2	.N	I"
+chrM	6061	C	C	30	0	25	2	.N	I"
+chrM	6062	T	T	33	0	25	2	..	II
+chrM	6063	A	A	33	0	25	2	..	II
+chrM	6064	T	T	33	0	25	2	..	II
+chrM	6065	T	T	33	0	25	2	..	II
+chrM	6066	C	C	33	0	25	2	..	II
+chrM	6067	T	T	33	0	25	2	..	II
+chrM	6068	G	G	33	0	25	2	..	II
+chrM	6069	A	A	33	0	25	2	..	II
+chrM	6070	T	T	33	0	25	2	..	II
+chrM	6071	T	T	33	0	25	2	..	II
+chrM	6072	C	C	33	0	25	2	..	II
+chrM	6073	T	T	33	0	25	2	..	II
+chrM	6074	T	T	33	0	25	2	..	II
+chrM	6075	C	C	33	0	25	2	.$.	EI
+chrM	6076	G	G	30	0	25	1	.	I
+chrM	6077	G	G	30	0	25	1	.	I
+chrM	6078	A	A	30	0	25	1	.	I
+chrM	6079	C	C	30	0	25	1	.	I
+chrM	6080	A	A	30	0	25	1	.	A
+chrM	6081	C	C	30	0	25	1	.	I
+chrM	6082	C	C	30	0	25	1	.	I
+chrM	6083	C	C	30	0	25	1	.	I
+chrM	6084	C	C	30	0	25	1	.	I
+chrM	6085	G	G	30	0	25	1	.	F
+chrM	6086	A	N	0	0	0	1	.	(
+chrM	6087	A	A	30	0	25	1	.	.
+chrM	6088	G	G	30	0	25	1	.$	E
+chrM	6379	T	T	30	0	25	1	^:.	E
+chrM	6380	G	G	30	0	25	1	.	I
+chrM	6381	A	A	30	0	25	1	.	I
+chrM	6382	G	G	30	0	25	1	.	I
+chrM	6383	C	C	30	0	25	1	.	I
+chrM	6384	T	T	30	0	25	1	.	I
+chrM	6385	C	C	30	0	25	1	.	I
+chrM	6386	T	N	0	0	0	1	N	"
+chrM	6387	A	N	0	0	0	1	N	"
+chrM	6388	G	G	30	0	25	1	.	I
+chrM	6389	G	G	30	0	25	1	.	I
+chrM	6390	C	C	30	0	25	1	.	I
+chrM	6391	T	T	30	0	25	1	.	I
+chrM	6392	T	T	30	0	25	1	.	I
+chrM	6393	C	C	30	0	25	1	.	I
+chrM	6394	A	A	30	0	25	1	.	C
+chrM	6395	T	T	30	0	25	1	.	I
+chrM	6396	C	C	30	0	25	1	.	I
+chrM	6397	T	T	30	0	25	1	.	I
+chrM	6398	T	T	30	0	25	1	.	I
+chrM	6399	C	C	30	0	25	1	.	I
+chrM	6400	T	T	30	0	25	1	.	I
+chrM	6401	T	T	30	0	25	1	.	I
+chrM	6402	A	A	30	0	25	1	.	I
+chrM	6403	T	T	30	0	25	1	.	I
+chrM	6404	T	T	30	0	25	1	.	I
+chrM	6405	C	C	30	0	25	1	.	I
+chrM	6406	A	A	30	0	25	1	.	I
+chrM	6407	C	C	30	0	25	1	.	I
+chrM	6408	A	A	30	0	25	1	.	I
+chrM	6409	G	G	30	0	25	1	.	@
+chrM	6410	T	T	30	0	25	1	.	I
+chrM	6411	A	A	30	0	25	1	.	I
+chrM	6412	G	G	30	0	25	1	.	5
+chrM	6413	G	G	30	0	25	1	.	@
+chrM	6414	A	A	30	0	25	1	.$	E
+chrM	6591	A	A	30	0	25	1	^:.	>
+chrM	6592	A	A	30	0	25	1	.	?
+chrM	6593	A	A	30	0	25	1	.	A
+chrM	6594	A	A	30	0	25	1	.	B
+chrM	6595	A	A	30	0	25	1	.	E
+chrM	6596	T	T	30	0	25	1	.	I
+chrM	6597	C	C	30	0	25	1	.	I
+chrM	6598	C	N	0	0	0	1	N	"
+chrM	6599	A	N	0	0	0	1	N	"
+chrM	6600	C	C	30	0	25	1	.	I
+chrM	6601	T	T	30	0	25	1	.	I
+chrM	6602	T	T	30	0	25	1	.	I
+chrM	6603	T	T	30	0	25	1	.	I
+chrM	6604	A	A	30	0	25	1	.	I
+chrM	6605	C	C	30	0	25	1	.	I
+chrM	6606	A	A	30	0	25	1	.	I
+chrM	6607	A	A	30	0	25	1	.	I
+chrM	6608	T	T	30	0	25	1	.	I
+chrM	6609	T	T	30	0	25	1	.	I
+chrM	6610	A	A	30	0	25	1	.	I
+chrM	6611	T	T	30	0	25	1	.	I
+chrM	6612	A	A	30	0	25	1	.	I
+chrM	6613	T	T	30	0	25	1	.	I
+chrM	6614	T	T	30	0	25	1	.	I
+chrM	6615	C	C	30	0	25	1	.	I
+chrM	6616	G	G	30	0	25	1	.	F
+chrM	6617	T	T	30	0	25	1	.	I
+chrM	6618	A	A	30	0	25	1	.	I
+chrM	6619	G	G	30	0	25	1	.	I
+chrM	6620	G	G	30	0	25	1	.	6
+chrM	6621	G	G	30	0	25	1	.	A
+chrM	6622	G	G	30	0	25	1	.	I
+chrM	6623	T	T	30	0	25	1	.	I
+chrM	6624	A	A	30	0	25	1	.	E
+chrM	6625	A	A	30	0	25	1	.	B
+chrM	6626	A	A	30	0	25	1	.$	@
+chrM	6695	A	A	30	0	25	1	^:.	E
+chrM	6696	C	C	30	0	25	1	.	I
+chrM	6697	G	G	30	0	25	1	.	I
+chrM	6698	C	C	30	0	25	1	.	I
+chrM	6699	A	A	30	0	25	1	.	I
+chrM	6700	T	T	30	0	25	1	.	I
+chrM	6701	A	A	30	0	25	1	.	I
+chrM	6702	T	N	0	0	0	1	N	"
+chrM	6703	A	A	30	0	25	2	N^:.	"E
+chrM	6704	C	C	33	0	25	2	..	II
+chrM	6705	A	A	33	0	25	2	..	II
+chrM	6706	A	A	33	0	25	2	..	II
+chrM	6707	C	C	33	0	25	2	..	II
+chrM	6708	A	A	33	0	25	2	..	II
+chrM	6709	T	T	33	0	25	2	..	II
+chrM	6710	G	G	30	0	25	2	.N	I"
+chrM	6711	A	A	30	0	25	2	.N	I"
+chrM	6712	A	A	33	0	25	2	..	II
+chrM	6713	A	A	33	0	25	2	..	II
+chrM	6714	T	T	33	0	25	2	..	II
+chrM	6715	A	A	33	0	25	2	..	II
+chrM	6716	C	C	33	0	25	2	..	II
+chrM	6717	C	C	33	0	25	2	..	II
+chrM	6718	A	A	33	0	25	2	..	II
+chrM	6719	T	T	33	0	25	2	..	II
+chrM	6720	C	C	33	0	25	2	..	IA
+chrM	6721	T	T	33	0	25	2	..	II
+chrM	6722	C	C	33	0	25	2	..	II
+chrM	6723	A	A	33	0	25	2	..	FI
+chrM	6724	T	T	33	0	25	2	..	II
+chrM	6725	C	C	33	0	25	2	..	II
+chrM	6726	C	C	33	0	25	2	..	II
+chrM	6727	A	A	33	0	25	2	..	I>
+chrM	6728	T	T	33	0	25	2	..	II
+chrM	6729	A	A	33	0	25	2	..	GI
+chrM	6730	G	G	33	0	25	2	.$.	>H
+chrM	6731	G	G	30	0	25	1	.	I
+chrM	6732	A	A	30	0	25	1	.	=
+chrM	6733	T	T	30	0	25	1	.	I
+chrM	6734	C	C	30	0	25	1	.	I
+chrM	6735	T	T	30	0	25	1	.	E
+chrM	6736	T	T	30	0	25	1	.	B
+chrM	6737	T	T	30	0	25	1	.	A
+chrM	6738	T	T	30	0	25	1	.$	?
+chrM	6809	C	N	0	0	0	1	^:,	)
+chrM	6810	T	T	30	0	25	1	,	I
+chrM	6811	A	A	30	0	25	1	,	I
+chrM	6812	C	N	0	0	0	1	,	&
+chrM	6813	A	A	30	0	25	1	,	I
+chrM	6814	G	G	30	0	25	1	,	I
+chrM	6815	T	T	30	0	25	1	,	I
+chrM	6816	A	A	30	0	25	1	,	I
+chrM	6817	G	G	30	0	25	1	,	I
+chrM	6818	A	A	30	0	25	1	,	I
+chrM	6819	A	A	30	0	25	1	,	I
+chrM	6820	T	T	30	0	25	1	,	I
+chrM	6821	T	T	30	0	25	1	,	I
+chrM	6822	A	A	30	0	25	1	,	I
+chrM	6823	A	A	30	0	25	1	,	I
+chrM	6824	C	C	30	0	25	1	,	1
+chrM	6825	C	C	30	0	25	1	,	I
+chrM	6826	T	T	30	0	25	1	,	I
+chrM	6827	C	C	30	0	25	1	,	I
+chrM	6828	A	A	30	0	25	1	,	I
+chrM	6829	A	A	30	0	25	1	,	I
+chrM	6830	C	C	30	0	25	1	,	I
+chrM	6831	T	T	30	0	25	1	,	I
+chrM	6832	A	A	30	0	25	1	,	I
+chrM	6833	A	A	30	0	25	1	,	I
+chrM	6834	T	T	30	0	25	1	,	I
+chrM	6835	C	C	30	0	25	1	,	I
+chrM	6836	T	N	0	0	0	1	n	"
+chrM	6837	G	N	0	0	0	1	n	"
+chrM	6838	G	G	30	0	25	1	,	I
+chrM	6839	A	A	30	0	25	1	,	I
+chrM	6840	A	A	30	0	25	1	,	I
+chrM	6841	T	T	30	0	25	1	,	I
+chrM	6842	G	G	30	0	25	1	,	I
+chrM	6843	A	A	30	0	25	1	,	I
+chrM	6844	C	C	30	0	25	1	,$	E
+chrM	7018	A	A	30	0	25	1	^:.	A
+chrM	7019	A	A	30	0	25	1	.	B
+chrM	7020	A	A	30	0	25	1	.	E
+chrM	7021	T	T	30	0	25	1	.	I
+chrM	7022	T	T	30	0	25	1	.	I
+chrM	7023	A	A	30	0	25	1	.	I
+chrM	7024	T	T	30	0	25	1	.	I
+chrM	7025	A	N	0	0	0	1	N	"
+chrM	7026	G	N	0	0	0	1	N	"
+chrM	7027	G	G	30	0	25	1	.	I
+chrM	7028	T	T	30	0	25	1	.	I
+chrM	7029	T	T	30	0	25	1	.	I
+chrM	7030	A	A	30	0	25	1	.	I
+chrM	7031	A	A	30	0	25	1	.	I
+chrM	7032	A	A	30	0	25	1	.	I
+chrM	7033	C	C	30	0	25	1	.	I
+chrM	7034	C	C	30	0	25	1	.	I
+chrM	7035	C	C	30	0	25	1	.	I
+chrM	7036	C	C	30	0	25	1	.	I
+chrM	7037	T	T	30	0	25	1	.	I
+chrM	7038	A	A	30	0	25	1	.	I
+chrM	7039	T	T	30	0	25	1	.	I
+chrM	7040	A	A	30	0	25	1	.	B
+chrM	7041	T	T	30	0	25	1	.	I
+chrM	7042	A	A	30	0	25	1	.	D
+chrM	7043	C	C	30	0	25	1	.	I
+chrM	7044	C	C	30	0	25	1	.	I
+chrM	7045	T	T	30	0	25	1	.	I
+chrM	7046	C	C	30	0	25	1	.	I
+chrM	7047	T	T	30	0	25	1	.	I
+chrM	7048	A	A	30	0	25	1	.	0
+chrM	7049	T	T	30	0	25	1	.	I
+chrM	7050	G	G	30	0	25	1	.	I
+chrM	7051	G	N	0	0	0	1	.	-
+chrM	7052	C	C	30	0	25	1	.	E
+chrM	7053	C	C	30	0	25	1	.$	B
+chrM	7122	C	C	30	0	25	1	^:,	B
+chrM	7123	C	C	30	0	25	1	,	E
+chrM	7124	A	A	30	0	25	1	,	I
+chrM	7125	C	C	30	0	25	1	,	4
+chrM	7126	A	A	30	0	25	1	,	I
+chrM	7127	C	C	30	0	25	1	,	I
+chrM	7128	A	A	30	0	25	1	,	I
+chrM	7129	C	C	30	0	25	1	,	I
+chrM	7130	T	T	30	0	25	1	,	I
+chrM	7131	A	A	30	0	25	1	,	I
+chrM	7132	A	A	30	0	25	1	,	I
+chrM	7133	T	T	30	0	25	1	,	I
+chrM	7134	A	A	30	0	25	1	,	I
+chrM	7135	A	A	30	0	25	1	,	I
+chrM	7136	T	T	30	0	25	1	,	I
+chrM	7137	C	C	30	0	25	1	,	I
+chrM	7138	G	G	30	0	25	1	,	I
+chrM	7139	T	T	30	0	25	1	,	I
+chrM	7140	A	A	30	0	25	1	,	I
+chrM	7141	T	T	30	0	25	1	,	I
+chrM	7142	T	T	30	0	25	1	,	I
+chrM	7143	C	C	30	0	25	1	,	I
+chrM	7144	C	C	30	0	25	1	,	I
+chrM	7145	T	T	30	0	25	1	,	I
+chrM	7146	A	A	30	0	25	1	,	I
+chrM	7147	A	A	30	0	25	1	,	I
+chrM	7148	T	T	30	0	25	1	,	I
+chrM	7149	T	N	0	0	0	1	n	"
+chrM	7150	A	N	0	0	0	1	n	"
+chrM	7151	G	G	30	0	25	1	,	I
+chrM	7152	C	C	30	0	25	1	,	I
+chrM	7153	T	T	30	0	25	1	,	I
+chrM	7154	C	C	30	0	25	1	,	I
+chrM	7155	T	T	30	0	25	1	,	I
+chrM	7156	C	C	30	0	25	1	,	I
+chrM	7157	T	T	30	0	25	1	,$	D
+chrM	7191	T	T	30	0	25	1	^:,	<
+chrM	7192	A	A	30	0	25	1	,	I
+chrM	7193	A	A	30	0	25	1	,	I
+chrM	7194	A	A	30	0	25	1	,	I
+chrM	7195	T	T	30	0	25	1	,	0
+chrM	7196	T	T	30	0	25	1	,	E
+chrM	7197	A	A	30	0	25	1	,	I
+chrM	7198	A	A	30	0	25	1	,	I
+chrM	7199	C	C	30	0	25	1	,	3
+chrM	7200	C	N	0	0	0	1	,	+
+chrM	7201	C	C	30	0	25	1	,	3
+chrM	7202	A	A	30	0	25	1	,	I
+chrM	7203	T	T	30	0	25	1	,	2
+chrM	7204	A	A	30	0	25	1	,	9
+chrM	7205	C	C	30	0	25	1	,	I
+chrM	7206	C	C	30	0	25	1	,	>
+chrM	7207	A	A	30	0	25	1	,	I
+chrM	7208	G	G	30	0	25	1	,	I
+chrM	7209	C	C	30	0	25	1	,	I
+chrM	7210	A	A	30	0	25	1	,	8
+chrM	7211	C	C	30	0	25	1	,	A
+chrM	7212	C	C	30	0	25	1	,	I
+chrM	7213	A	A	30	0	25	1	,	I
+chrM	7214	T	T	30	0	25	1	,	I
+chrM	7215	A	A	30	0	25	1	,	I
+chrM	7216	G	G	30	0	25	1	,	I
+chrM	7217	A	A	30	0	25	1	,	I
+chrM	7218	T	N	0	0	0	1	n	"
+chrM	7219	G	N	0	0	0	1	n	"
+chrM	7220	C	C	30	0	25	1	,	I
+chrM	7221	T	T	30	0	25	1	,	I
+chrM	7222	C	C	30	0	25	1	,	I
+chrM	7223	A	A	30	0	25	1	,	I
+chrM	7224	A	A	30	0	25	1	,	I
+chrM	7225	G	G	30	0	25	1	,	I
+chrM	7226	A	A	30	0	25	1	,$	>
+chrM	7348	G	G	30	0	25	1	^:,	B
+chrM	7349	G	G	30	0	25	1	,	E
+chrM	7350	C	C	30	0	25	1	,	/
+chrM	7351	C	C	30	0	25	1	,	<
+chrM	7352	A	N	0	0	0	1	,	)
+chrM	7353	C	C	30	0	25	1	,	2
+chrM	7354	C	C	30	0	25	1	,	I
+chrM	7355	A	A	30	0	25	1	,	I
+chrM	7356	A	A	30	0	25	1	,	I
+chrM	7357	T	T	30	0	25	1	,	I
+chrM	7358	G	G	30	0	25	1	,	I
+chrM	7359	A	A	30	0	25	1	,	I
+chrM	7360	T	T	30	0	25	1	,	I
+chrM	7361	A	A	30	0	25	1	,	I
+chrM	7362	C	C	30	0	25	1	,	I
+chrM	7363	T	T	30	0	25	1	,	I
+chrM	7364	G	G	30	0	25	1	,	I
+chrM	7365	A	A	30	0	25	1	,	I
+chrM	7366	A	A	30	0	25	1	,	I
+chrM	7367	G	G	30	0	25	1	,	I
+chrM	7368	C	C	30	0	25	1	,	I
+chrM	7369	T	T	30	0	25	1	,	I
+chrM	7370	A	A	30	0	25	1	,	I
+chrM	7371	C	C	30	0	25	1	,	I
+chrM	7372	G	G	30	0	25	1	,	I
+chrM	7373	A	A	30	0	25	1	,	I
+chrM	7374	G	G	30	0	25	1	,	I
+chrM	7375	T	N	0	0	0	1	n	"
+chrM	7376	A	N	0	0	0	1	n	"
+chrM	7377	T	T	30	0	25	1	,	I
+chrM	7378	A	A	30	0	25	1	,	I
+chrM	7379	C	C	30	0	25	1	,	I
+chrM	7380	C	C	30	0	25	1	,	I
+chrM	7381	G	G	30	0	25	1	,	I
+chrM	7382	A	A	30	0	25	1	,	I
+chrM	7383	T	T	30	0	25	1	,$	>
+chrM	7398	C	C	30	0	25	1	^:,	E
+chrM	7399	T	T	30	0	25	1	,	E
+chrM	7400	T	T	30	0	25	1	,	I
+chrM	7401	T	T	30	0	25	1	,	I
+chrM	7402	G	G	30	0	25	1	,	I
+chrM	7403	A	A	30	0	25	1	,	I
+chrM	7404	C	C	30	0	25	1	,	I
+chrM	7405	T	T	30	0	25	1	,	I
+chrM	7406	C	C	30	0	25	1	,	I
+chrM	7407	C	C	30	0	25	1	,	I
+chrM	7408	T	T	30	0	25	1	,	I
+chrM	7409	A	A	30	0	25	1	,	I
+chrM	7410	C	C	30	0	25	1	,	I
+chrM	7411	A	A	30	0	25	1	,	I
+chrM	7412	T	T	30	0	25	1	,	I
+chrM	7413	G	G	30	0	25	1	,	I
+chrM	7414	A	A	30	0	25	1	,	I
+chrM	7415	T	T	30	0	25	1	,	I
+chrM	7416	C	C	30	0	25	1	,	I
+chrM	7417	C	C	30	0	25	1	,	I
+chrM	7418	C	C	30	0	25	1	,	I
+chrM	7419	C	C	30	0	25	1	,	I
+chrM	7420	A	A	30	0	25	1	,	I
+chrM	7421	C	C	30	0	25	1	,	I
+chrM	7422	A	A	30	0	25	1	,	I
+chrM	7423	T	T	30	0	25	1	,	I
+chrM	7424	C	C	30	0	25	1	,	I
+chrM	7425	A	N	0	0	0	1	n	"
+chrM	7426	G	N	0	0	0	1	n	"
+chrM	7427	A	A	30	0	25	1	,	I
+chrM	7428	C	C	30	0	25	1	,	I
+chrM	7429	C	C	30	0	25	1	,	I
+chrM	7430	T	T	30	0	25	1	,	I
+chrM	7431	A	A	30	0	25	1	,	>
+chrM	7432	A	A	30	0	25	1	,	;
+chrM	7433	A	A	30	0	25	1	,$	:
+chrM	7564	G	G	30	0	25	1	^:,	5
+chrM	7565	A	A	30	0	25	1	,	I
+chrM	7566	C	C	30	0	25	1	,	I
+chrM	7567	G	G	30	0	25	1	,	I
+chrM	7568	C	C	30	0	25	1	,	@
+chrM	7569	T	T	30	0	25	1	,	6
+chrM	7570	A	A	30	0	25	1	,	I
+chrM	7571	T	T	30	0	25	1	,	I
+chrM	7572	C	C	30	0	25	1	,	I
+chrM	7573	C	C	30	0	25	1	,	I
+chrM	7574	C	C	30	0	25	1	,	I
+chrM	7575	T	T	30	0	25	1	,	>
+chrM	7576	G	G	30	0	25	1	,	I
+chrM	7577	G	G	30	0	25	1	,	I
+chrM	7578	G	G	30	0	25	1	,	I
+chrM	7579	C	C	30	0	25	1	,	5
+chrM	7580	G	G	30	0	25	1	,	I
+chrM	7581	C	C	30	0	25	1	,	I
+chrM	7582	C	C	30	0	25	1	,	I
+chrM	7583	T	T	30	0	25	1	,	I
+chrM	7584	A	A	30	0	25	1	,	I
+chrM	7585	A	A	30	0	25	1	,	I
+chrM	7586	A	A	30	0	25	1	,	I
+chrM	7587	T	T	30	0	25	1	,	I
+chrM	7588	C	C	30	0	25	1	,	I
+chrM	7589	A	A	30	0	25	1	,	I
+chrM	7590	G	G	30	0	25	1	,	I
+chrM	7591	A	N	0	0	0	1	n	"
+chrM	7592	C	N	0	0	0	1	n	"
+chrM	7593	A	A	30	0	25	1	,	I
+chrM	7594	A	A	30	0	25	1	,	I
+chrM	7595	C	C	30	0	25	1	,	I
+chrM	7596	T	T	30	0	25	1	,	I
+chrM	7597	C	C	30	0	25	1	,	I
+chrM	7598	T	T	30	0	25	1	,	I
+chrM	7599	C	C	30	0	25	1	,$	E
+chrM	7752	A	A	30	0	25	1	^:.	E
+chrM	7753	G	G	30	0	25	1	.	I
+chrM	7754	C	C	30	0	25	1	.	I
+chrM	7755	A	A	30	0	25	1	.	I
+chrM	7756	T	T	30	0	25	1	.	I
+chrM	7757	T	T	30	0	25	1	.	I
+chrM	7758	A	A	30	0	25	1	.	I
+chrM	7759	A	N	0	0	0	1	N	"
+chrM	7760	C	N	0	0	0	1	N	"
+chrM	7761	C	C	30	0	25	1	.	I
+chrM	7762	T	T	30	0	25	1	.	I
+chrM	7763	T	T	30	0	25	1	.	I
+chrM	7764	T	T	30	0	25	1	.	I
+chrM	7765	T	T	30	0	25	1	.	I
+chrM	7766	A	A	30	0	25	1	.	I
+chrM	7767	A	N	0	0	0	1	.	,
+chrM	7768	G	G	30	0	25	1	.	I
+chrM	7769	T	T	30	0	25	1	.	I
+chrM	7770	T	T	30	0	25	1	.	I
+chrM	7771	A	A	30	0	25	1	.	B
+chrM	7772	A	A	30	0	25	1	.	;
+chrM	7773	A	A	30	0	25	1	.	B
+chrM	7774	G	G	30	0	25	1	.	I
+chrM	7775	A	A	30	0	25	1	.	<
+chrM	7776	T	T	30	0	25	1	.	I
+chrM	7777	T	T	30	0	25	1	.	I
+chrM	7778	G	G	30	0	25	1	.	I
+chrM	7779	A	A	30	0	25	1	.	I
+chrM	7780	G	G	30	0	25	1	.	I
+chrM	7781	G	G	30	0	25	1	.	I
+chrM	7782	G	N	0	0	0	1	.	+
+chrM	7783	T	T	30	0	25	1	.	I
+chrM	7784	T	T	30	0	25	1	.	I
+chrM	7785	C	C	30	0	25	1	.	I
+chrM	7786	A	A	30	0	25	1	.	B
+chrM	7787	A	A	30	0	25	1	.$	B
+chrM	7971	G	G	30	0	25	1	^:,	@
+chrM	7972	A	A	30	0	25	1	,	I
+chrM	7973	A	A	30	0	25	1	,	I
+chrM	7974	A	A	30	0	25	1	,	I
+chrM	7975	A	A	30	0	25	1	,	I
+chrM	7976	T	T	30	0	25	1	,	7
+chrM	7977	C	C	30	0	25	1	,	I
+chrM	7978	T	T	30	0	25	1	,	I
+chrM	7979	A	A	30	0	25	1	,	I
+chrM	7980	T	T	30	0	25	1	,	D
+chrM	7981	T	T	30	0	25	1	,	C
+chrM	7982	C	C	30	0	25	1	,	I
+chrM	7983	G	G	30	0	25	1	,	I
+chrM	7984	C	C	30	0	25	1	,	I
+chrM	7985	C	C	30	0	25	1	,	I
+chrM	7986	T	T	30	0	25	1	,	B
+chrM	7987	C	C	30	0	25	1	,	I
+chrM	7988	T	T	30	0	25	1	,	I
+chrM	7989	T	T	30	0	25	1	,	I
+chrM	7990	T	T	30	0	25	1	,	I
+chrM	7991	C	C	30	0	25	1	,	I
+chrM	7992	G	G	30	0	25	1	,	I
+chrM	7993	C	C	30	0	25	1	,	I
+chrM	7994	T	T	30	0	25	1	,	I
+chrM	7995	A	A	30	0	25	1	,	I
+chrM	7996	C	C	30	0	25	1	,	I
+chrM	7997	C	C	30	0	25	1	,	I
+chrM	7998	C	N	0	0	0	1	n	"
+chrM	7999	C	N	0	0	0	1	n	"
+chrM	8000	A	A	30	0	25	1	,	I
+chrM	8001	A	A	30	0	25	1	,	I
+chrM	8002	C	C	30	0	25	1	,	I
+chrM	8003	A	A	30	0	25	1	,	I
+chrM	8004	A	A	30	0	25	1	,	I
+chrM	8005	T	T	30	0	25	1	,	I
+chrM	8006	A	A	30	0	25	1	,$	E
+chrM	8346	T	T	30	0	25	1	^:.	A
+chrM	8347	T	T	30	0	25	1	.	B
+chrM	8348	T	T	30	0	25	1	.	E
+chrM	8349	C	C	30	0	25	1	.	I
+chrM	8350	T	T	30	0	25	1	.	I
+chrM	8351	A	A	30	0	25	1	.	I
+chrM	8352	C	C	30	0	25	1	.	I
+chrM	8353	C	N	0	0	0	1	N	"
+chrM	8354	T	N	0	0	0	1	N	"
+chrM	8355	C	C	30	0	25	1	.	I
+chrM	8356	A	A	30	0	25	1	.	I
+chrM	8357	A	A	30	0	25	1	.	I
+chrM	8358	G	G	30	0	25	1	.	I
+chrM	8359	G	G	30	0	25	1	.	I
+chrM	8360	G	G	30	0	25	1	.	=
+chrM	8361	A	A	30	0	25	1	.	I
+chrM	8362	C	C	30	0	25	1	.	7
+chrM	8363	G	G	30	0	25	1	.	I
+chrM	8364	C	C	30	0	25	1	.	I
+chrM	8365	C	C	30	0	25	1	.	I
+chrM	8366	C	C	30	0	25	1	.	I
+chrM	8367	A	A	30	0	25	1	.	3
+chrM	8368	T	T	30	0	25	1	.	I
+chrM	8369	T	T	30	0	25	1	.	I
+chrM	8370	T	T	30	0	25	1	.	I
+chrM	8371	T	T	30	0	25	1	.	I
+chrM	8372	C	C	30	0	25	1	.	I
+chrM	8373	C	C	30	0	25	1	.	I
+chrM	8374	T	T	30	0	25	1	.	I
+chrM	8375	C	C	30	0	25	1	.	I
+chrM	8376	A	A	30	0	25	1	.	/
+chrM	8377	T	T	30	0	25	1	.	I
+chrM	8378	C	C	30	0	25	1	.	D
+chrM	8379	C	C	30	0	25	1	.	@
+chrM	8380	C	C	30	0	25	1	.	A
+chrM	8381	C	C	30	0	25	1	.$	?
+chrM	8421	C	C	30	0	25	1	^:,	B
+chrM	8422	C	C	30	0	25	1	,	E
+chrM	8423	T	N	0	0	0	1	,	%
+chrM	8424	G	G	30	0	25	1	,	:
+chrM	8425	T	T	30	0	25	1	,	:
+chrM	8426	A	A	30	0	25	1	,	I
+chrM	8427	G	G	30	0	25	1	,	<
+chrM	8428	C	C	30	0	25	1	,	I
+chrM	8429	C	C	30	0	25	1	,	I
+chrM	8430	C	C	30	0	25	1	,	I
+chrM	8431	T	T	30	0	25	1	,	I
+chrM	8432	A	A	30	0	25	1	,	I
+chrM	8433	G	G	30	0	25	1	,	E
+chrM	8434	C	C	30	0	25	1	,	I
+chrM	8435	C	C	30	0	25	1	,	I
+chrM	8436	G	G	30	0	25	1	,	I
+chrM	8437	T	T	30	0	25	1	,	8
+chrM	8438	G	G	30	0	25	1	,	I
+chrM	8439	C	C	30	0	25	1	,	I
+chrM	8440	G	G	30	0	25	1	,	I
+chrM	8441	G	G	30	0	25	1	,	I
+chrM	8442	C	C	30	0	25	1	,	I
+chrM	8443	T	T	30	0	25	1	,	I
+chrM	8444	A	A	30	0	25	1	,	I
+chrM	8445	A	A	30	0	25	1	,	I
+chrM	8446	C	C	30	0	25	1	,	I
+chrM	8447	C	C	30	0	25	1	,	I
+chrM	8448	G	N	0	0	0	1	n	"
+chrM	8449	C	N	0	0	0	1	n	"
+chrM	8450	T	T	33	0	25	2	,^:,	IE
+chrM	8451	A	A	33	0	25	2	,,	II
+chrM	8452	A	A	33	0	25	2	,,	II
+chrM	8453	C	C	33	0	25	2	,,	II
+chrM	8454	A	A	33	0	25	2	,,	II
+chrM	8455	T	T	33	0	25	2	,,	E>
+chrM	8456	T	T	33	0	25	2	,$,	B1
+chrM	8457	A	A	30	0	25	1	,	I
+chrM	8458	C	C	30	0	25	1	,	I
+chrM	8459	C	C	30	0	25	1	,	I
+chrM	8460	G	G	30	0	25	1	,	I
+chrM	8461	C	C	30	0	25	1	,	I
+chrM	8462	C	C	30	0	25	1	,	I
+chrM	8463	G	G	30	0	25	1	,	I
+chrM	8464	G	G	30	0	25	1	,	I
+chrM	8465	A	A	30	0	25	1	,	I
+chrM	8466	C	C	30	0	25	1	,	I
+chrM	8467	A	A	30	0	25	1	,	I
+chrM	8468	C	C	30	0	25	1	,	I
+chrM	8469	C	C	30	0	25	1	,	I
+chrM	8470	T	T	30	0	25	1	,	I
+chrM	8471	C	C	30	0	25	1	,	I
+chrM	8472	C	C	30	0	25	1	,	I
+chrM	8473	T	T	30	0	25	1	,	I
+chrM	8474	A	A	30	0	25	1	,	I
+chrM	8475	A	A	30	0	25	1	,	I
+chrM	8476	T	T	30	0	25	1	,	I
+chrM	8477	A	N	0	0	0	1	n	"
+chrM	8478	C	N	0	0	0	1	n	"
+chrM	8479	A	A	30	0	25	1	,	I
+chrM	8480	C	C	30	0	25	1	,	I
+chrM	8481	C	C	30	0	25	1	,	I
+chrM	8482	T	T	30	0	25	1	,	I
+chrM	8483	C	C	30	0	25	1	,	I
+chrM	8484	A	A	30	0	25	1	,	I
+chrM	8485	T	T	30	0	25	1	,$	E
+chrM	8630	A	A	30	0	25	1	^:.	E
+chrM	8631	C	C	30	0	25	1	.	I
+chrM	8632	A	A	30	0	25	1	.	I
+chrM	8633	C	C	30	0	25	1	.	I
+chrM	8634	G	G	30	0	25	1	.	I
+chrM	8635	A	A	30	0	25	1	.	I
+chrM	8636	C	C	30	0	25	1	.	I
+chrM	8637	A	N	0	0	0	1	N	"
+chrM	8638	A	N	0	0	0	1	N	"
+chrM	8639	C	C	30	0	25	1	.	I
+chrM	8640	A	A	30	0	25	1	.	I
+chrM	8641	C	C	30	0	25	1	.	I
+chrM	8642	C	C	30	0	25	1	.	I
+chrM	8643	T	T	30	0	25	1	.	I
+chrM	8644	A	A	30	0	25	1	.	I
+chrM	8645	A	A	30	0	25	1	.	I
+chrM	8646	T	T	30	0	25	1	.	I
+chrM	8647	G	G	30	0	25	1	.	I
+chrM	8648	A	A	30	0	25	1	.	I
+chrM	8649	C	C	30	0	25	1	.	I
+chrM	8650	C	C	30	0	25	1	.	I
+chrM	8651	C	C	30	0	25	1	.	I
+chrM	8652	A	A	30	0	25	1	.	I
+chrM	8653	C	C	30	0	25	1	.	I
+chrM	8654	C	C	30	0	25	1	.	I
+chrM	8655	A	A	30	0	25	1	.	>
+chrM	8656	A	A	30	0	25	1	.	C
+chrM	8657	A	A	30	0	25	1	.	:
+chrM	8658	C	C	30	0	25	1	.	I
+chrM	8659	C	C	30	0	25	1	.	I
+chrM	8660	C	C	30	0	25	1	.	I
+chrM	8661	A	A	30	0	25	1	.	D
+chrM	8662	C	C	30	0	25	1	.	I
+chrM	8663	G	G	30	0	25	1	.	<
+chrM	8664	C	C	30	0	25	1	.	I
+chrM	8665	T	T	30	0	25	1	.$	>
+chrM	8752	C	C	30	0	25	1	^:,	E
+chrM	8753	T	T	30	0	25	1	,	B
+chrM	8754	T	T	30	0	25	1	,	I
+chrM	8755	T	T	30	0	25	1	,	I
+chrM	8756	A	A	30	0	25	1	,	I
+chrM	8757	A	A	30	0	25	1	,	I
+chrM	8758	C	C	30	0	25	1	,	I
+chrM	8759	T	T	30	0	25	1	,	I
+chrM	8760	C	C	30	0	25	1	,	I
+chrM	8761	A	A	30	0	25	1	,	I
+chrM	8762	A	A	30	0	25	1	,	I
+chrM	8763	C	C	30	0	25	1	,	I
+chrM	8764	C	C	33	0	25	2	,^:,	IE
+chrM	8765	T	T	33	0	25	2	,,	IA
+chrM	8766	T	T	33	0	25	2	,,	IA
+chrM	8767	A	A	33	0	25	2	,,	II
+chrM	8768	C	C	33	0	25	2	,,	II
+chrM	8769	T	T	33	0	25	2	,,	IH
+chrM	8770	T	T	33	0	25	2	,,	IA
+chrM	8771	C	C	33	0	25	2	,,	II
+chrM	8772	T	T	33	0	25	2	,,	I?
+chrM	8773	A	A	33	0	25	2	,,	II
+chrM	8774	G	G	33	0	25	2	,,	II
+chrM	8775	C	C	33	0	25	2	,,	II
+chrM	8776	T	T	33	0	25	2	,,	II
+chrM	8777	A	A	33	0	25	2	,,	II
+chrM	8778	T	T	33	0	25	2	,,	II
+chrM	8779	A	A	30	0	25	2	n,	"I
+chrM	8780	G	G	30	0	25	2	n,	"I
+chrM	8781	G	G	33	0	25	2	,,	II
+chrM	8782	G	G	33	0	25	2	,,	II
+chrM	8783	C	C	33	0	25	2	,,	II
+chrM	8784	T	T	33	0	25	2	,,	II
+chrM	8785	A	A	33	0	25	2	,,	II
+chrM	8786	T	T	33	0	25	2	,,	EI
+chrM	8787	T	T	33	0	25	2	,$,	BI
+chrM	8788	A	A	30	0	25	1	,	I
+chrM	8789	A	A	30	0	25	1	,	I
+chrM	8790	C	C	30	0	25	1	,	I
+chrM	8791	T	N	0	0	0	1	n	"
+chrM	8792	A	N	0	0	0	1	n	"
+chrM	8793	A	A	30	0	25	1	,	I
+chrM	8794	C	C	30	0	25	1	,	I
+chrM	8795	A	A	30	0	25	1	,	I
+chrM	8796	T	T	30	0	25	1	,	I
+chrM	8797	C	C	30	0	25	1	,	I
+chrM	8798	C	C	30	0	25	1	,	I
+chrM	8799	T	T	30	0	25	1	,$	>
+chrM	8908	C	C	30	0	25	1	^:,	E
+chrM	8909	T	T	30	0	25	1	,	:
+chrM	8910	C	C	30	0	25	1	,	I
+chrM	8911	A	A	30	0	25	1	,	I
+chrM	8912	G	G	30	0	25	1	,	D
+chrM	8913	A	A	30	0	25	1	,	I
+chrM	8914	A	A	30	0	25	1	,	I
+chrM	8915	G	G	30	0	25	1	,	I
+chrM	8916	T	T	30	0	25	1	,	I
+chrM	8917	C	C	30	0	25	1	,	I
+chrM	8918	T	T	30	0	25	1	,	I
+chrM	8919	T	T	30	0	25	1	,	<
+chrM	8920	C	C	30	0	25	1	,	I
+chrM	8921	T	T	30	0	25	1	,	F
+chrM	8922	T	T	30	0	25	1	,	I
+chrM	8923	C	C	30	0	25	1	,	I
+chrM	8924	T	T	30	0	25	1	,	F
+chrM	8925	T	T	30	0	25	1	,	E
+chrM	8926	C	C	30	0	25	1	,	I
+chrM	8927	T	T	30	0	25	1	,	H
+chrM	8928	C	C	30	0	25	1	,	I
+chrM	8929	T	T	33	0	25	2	,^:,	IE
+chrM	8930	G	G	33	0	25	2	,,	II
+chrM	8931	G	G	33	0	25	2	,,	II
+chrM	8932	C	C	33	0	25	2	,,	II
+chrM	8933	T	T	33	0	25	2	,,	II
+chrM	8934	T	T	33	0	25	2	,,	II
+chrM	8935	C	C	30	0	25	2	n,	"I
+chrM	8936	T	T	30	0	25	2	n,	";
+chrM	8937	T	T	33	0	25	2	,,	IG
+chrM	8938	C	C	33	0	25	2	,,	II
+chrM	8939	T	T	33	0	25	2	,,	IE
+chrM	8940	G	G	33	0	25	2	,,	II
+chrM	8941	A	A	33	0	25	2	,,	II
+chrM	8942	G	G	33	0	25	2	,,	II
+chrM	8943	C	C	33	0	25	2	,$,	>I
+chrM	8944	C	C	30	0	25	1	,	I
+chrM	8945	T	T	30	0	25	1	,	I
+chrM	8946	T	T	30	0	25	1	,	I
+chrM	8947	T	T	30	0	25	1	,	I
+chrM	8948	T	T	30	0	25	1	,	I
+chrM	8949	A	A	30	0	25	1	,	I
+chrM	8950	C	C	30	0	25	1	,	I
+chrM	8951	C	C	30	0	25	1	,	I
+chrM	8952	A	A	30	0	25	1	,	I
+chrM	8953	C	C	30	0	25	1	,	I
+chrM	8954	T	T	30	0	25	1	,	I
+chrM	8955	C	C	30	0	25	1	,	I
+chrM	8956	A	N	0	0	0	1	n	"
+chrM	8957	A	N	0	0	0	1	n	"
+chrM	8958	G	G	30	0	25	1	,	I
+chrM	8959	C	C	30	0	25	1	,	I
+chrM	8960	C	C	30	0	25	1	,	I
+chrM	8961	T	T	30	0	25	1	,	I
+chrM	8962	A	A	30	0	25	1	,	I
+chrM	8963	G	G	30	0	25	1	,	I
+chrM	8964	C	C	30	0	25	1	,$	>
+chrM	9111	G	G	30	0	25	1	^:.	E
+chrM	9112	T	T	30	0	25	1	.	I
+chrM	9113	A	A	30	0	25	1	.	I
+chrM	9114	A	A	30	0	25	1	.	I
+chrM	9115	A	A	30	0	25	1	.	I
+chrM	9116	A	A	30	0	25	1	.	I
+chrM	9117	A	A	30	0	25	1	.	I
+chrM	9118	T	N	0	0	0	1	N	"
+chrM	9119	A	N	0	0	0	1	N	"
+chrM	9120	T	T	30	0	25	1	.	I
+chrM	9121	G	G	30	0	25	1	.	I
+chrM	9122	C	C	30	0	25	1	.	I
+chrM	9123	T	T	30	0	25	1	.	I
+chrM	9124	C	C	30	0	25	1	.	I
+chrM	9125	C	C	30	0	25	1	.	I
+chrM	9126	A	A	30	0	25	1	.	I
+chrM	9127	A	A	30	0	25	1	.	I
+chrM	9128	G	G	30	0	25	1	.	I
+chrM	9129	G	G	30	0	25	1	.	I
+chrM	9130	C	C	30	0	25	1	.	I
+chrM	9131	C	C	30	0	25	1	.	I
+chrM	9132	T	T	30	0	25	1	.	I
+chrM	9133	A	A	30	0	25	1	.	I
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+chrM	9136	C	C	30	0	25	1	.	I
+chrM	9137	A	A	30	0	25	1	.	I
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+chrM	9139	C	C	30	0	25	1	.	I
+chrM	9140	A	A	30	0	25	1	.	E
+chrM	9141	C	C	30	0	25	1	.	I
+chrM	9142	A	A	30	0	25	1	.	B
+chrM	9143	A	A	30	0	25	1	.	8
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+chrM	9331	C	N	0	0	0	1	^:,	&
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+chrM	9334	C	C	30	0	25	1	,	I
+chrM	9335	C	C	30	0	25	1	,	I
+chrM	9336	A	N	0	0	0	1	,	-
+chrM	9337	C	C	30	0	25	1	,	<
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+chrM	9339	A	A	30	0	25	1	,	<
+chrM	9340	C	C	30	0	25	1	,	I
+chrM	9341	T	T	30	0	25	1	,	I
+chrM	9342	T	T	30	0	25	1	,	4
+chrM	9343	C	C	30	0	25	1	,	I
+chrM	9344	G	N	0	0	0	1	,	(
+chrM	9345	G	G	30	0	25	1	,	I
+chrM	9346	A	A	30	0	25	1	,	1
+chrM	9347	T	T	30	0	25	1	,	I
+chrM	9348	T	T	30	0	25	1	,	I
+chrM	9349	C	C	30	0	25	1	,	I
+chrM	9350	G	G	33	0	25	2	,^:.	IE
+chrM	9351	A	A	33	0	25	2	,.	II
+chrM	9352	A	A	33	0	25	2	,.	DI
+chrM	9353	G	G	33	0	25	2	,.	II
+chrM	9354	C	C	33	0	25	2	,.	II
+chrM	9355	A	A	33	0	25	2	,.	II
+chrM	9356	G	G	33	0	25	2	,.	II
+chrM	9357	C	C	30	0	25	2	,N	I"
+chrM	9358	C	N	0	0	0	2	nN	""
+chrM	9359	G	G	30	0	25	2	n.	"I
+chrM	9360	C	C	33	0	25	2	,.	II
+chrM	9361	T	T	33	0	25	2	,.	II
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+chrM	9363	G	G	33	0	25	2	,.	II
+chrM	9364	A	A	33	0	25	2	,.	II
+chrM	9365	T	T	33	0	25	2	,.	II
+chrM	9366	A	A	33	0	25	2	,$.	EI
+chrM	9367	C	C	30	0	25	1	.	I
+chrM	9368	T	T	30	0	25	1	.	I
+chrM	9369	G	G	30	0	25	1	.	I
+chrM	9370	A	A	30	0	25	1	.	I
+chrM	9371	C	C	30	0	25	1	.	I
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+chrM	9566	A	A	30	0	25	1	,	I
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+chrM	9569	A	A	30	0	25	1	,	I
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+chrM	9571	C	C	30	0	25	1	,	I
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+chrM	9590	A	N	0	0	0	1	n	"
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+chrM	9840	G	G	30	0	25	1	,	I
+chrM	9841	A	A	30	0	25	1	,	I
+chrM	9842	G	G	30	0	25	1	,	I
+chrM	9843	T	T	30	0	25	1	,	I
+chrM	9844	A	A	30	0	25	1	,	I
+chrM	9845	T	T	30	0	25	1	,$	E
+chrM	9916	T	T	30	0	25	1	^:.	E
+chrM	9917	G	G	30	0	25	1	.	I
+chrM	9918	T	T	30	0	25	1	.	I
+chrM	9919	C	C	30	0	25	1	.	I
+chrM	9920	A	A	30	0	25	1	.	I
+chrM	9921	C	C	30	0	25	1	.	I
+chrM	9922	T	T	30	0	25	1	.	I
+chrM	9923	A	N	0	0	0	1	N	"
+chrM	9924	G	N	0	0	0	1	N	"
+chrM	9925	T	T	30	0	25	1	.	I
+chrM	9926	C	C	30	0	25	1	.	I
+chrM	9927	C	C	30	0	25	1	.	I
+chrM	9928	A	A	30	0	25	1	.	I
+chrM	9929	T	T	30	0	25	1	.	I
+chrM	9930	A	A	30	0	25	1	.	=
+chrM	9931	T	T	30	0	25	1	.	I
+chrM	9932	T	T	30	0	25	1	.	I
+chrM	9933	A	A	30	0	25	1	.	I
+chrM	9934	A	A	30	0	25	1	.	9
+chrM	9935	T	T	30	0	25	1	.	I
+chrM	9936	A	A	30	0	25	1	.	@
+chrM	9937	T	T	30	0	25	1	.	I
+chrM	9938	C	C	30	0	25	1	.	I
+chrM	9939	T	T	30	0	25	1	.	I
+chrM	9940	T	T	30	0	25	1	.	I
+chrM	9941	C	C	30	0	25	1	.	I
+chrM	9942	C	C	30	0	25	1	.	I
+chrM	9943	T	T	30	0	25	1	.	I
+chrM	9944	A	A	30	0	25	1	.	B
+chrM	9945	G	G	30	0	25	1	.	I
+chrM	9946	C	C	30	0	25	1	.	I
+chrM	9947	A	A	30	0	25	1	.	E
+chrM	9948	T	T	30	0	25	1	.	I
+chrM	9949	T	T	30	0	25	1	.	I
+chrM	9950	C	C	30	0	25	1	.	I
+chrM	9951	A	A	30	0	25	1	.$	>
+chrM	10002	C	C	30	0	25	1	^:,	E
+chrM	10003	T	T	30	0	25	1	,	:
+chrM	10004	C	C	30	0	25	1	,	2
+chrM	10005	C	C	30	0	25	1	,	I
+chrM	10006	T	T	30	0	25	1	,	E
+chrM	10007	A	A	30	0	25	1	,	I
+chrM	10008	T	T	30	0	25	1	,	:
+chrM	10009	G	G	30	0	25	1	,	I
+chrM	10010	C	C	30	0	25	1	,	I
+chrM	10011	C	C	30	0	25	1	,	D
+chrM	10012	T	T	30	0	25	1	,	I
+chrM	10013	A	A	30	0	25	1	,	I
+chrM	10014	G	G	30	0	25	1	,	I
+chrM	10015	A	A	30	0	25	1	,	I
+chrM	10016	A	A	30	0	25	1	,	I
+chrM	10017	G	G	30	0	25	1	,	I
+chrM	10018	G	G	30	0	25	1	,	4
+chrM	10019	A	A	30	0	25	1	,	I
+chrM	10020	A	A	30	0	25	1	,	I
+chrM	10021	T	T	30	0	25	1	,	I
+chrM	10022	A	A	30	0	25	1	,	I
+chrM	10023	A	A	30	0	25	1	,	I
+chrM	10024	T	T	30	0	25	1	,	I
+chrM	10025	A	A	30	0	25	1	,	I
+chrM	10026	C	C	30	0	25	1	,	I
+chrM	10027	T	T	30	0	25	1	,	I
+chrM	10028	A	A	30	0	25	1	,	I
+chrM	10029	T	N	0	0	0	1	n	"
+chrM	10030	C	N	0	0	0	1	n	"
+chrM	10031	A	A	30	0	25	1	,	I
+chrM	10032	C	C	30	0	25	1	,	I
+chrM	10033	T	T	30	0	25	1	,	I
+chrM	10034	A	A	30	0	25	1	,	I
+chrM	10035	T	T	30	0	25	1	,	I
+chrM	10036	T	T	30	0	25	1	,	I
+chrM	10037	C	C	30	0	25	1	,$	E
+chrM	10391	G	G	30	0	25	1	^:.	E
+chrM	10392	C	C	30	0	25	1	.	I
+chrM	10393	C	C	30	0	25	1	.	I
+chrM	10394	C	C	30	0	25	1	.	I
+chrM	10395	C	C	30	0	25	1	.	I
+chrM	10396	A	A	30	0	25	1	.	I
+chrM	10397	C	C	30	0	25	1	.	I
+chrM	10398	T	N	0	0	0	1	N	"
+chrM	10399	T	N	0	0	0	1	N	"
+chrM	10400	C	C	30	0	25	1	.	I
+chrM	10401	T	T	30	0	25	1	.	I
+chrM	10402	G	G	30	0	25	1	.	I
+chrM	10403	G	G	30	0	25	1	.	I
+chrM	10404	T	T	30	0	25	1	.	I
+chrM	10405	G	G	30	0	25	1	.	I
+chrM	10406	T	T	30	0	25	1	.	I
+chrM	10407	T	T	30	0	25	1	.	I
+chrM	10408	G	G	30	0	25	1	.	I
+chrM	10409	A	A	30	0	25	1	.	I
+chrM	10410	C	C	30	0	25	1	.	I
+chrM	10411	A	A	30	0	25	1	.	I
+chrM	10412	A	A	30	0	25	1	.	I
+chrM	10413	C	C	30	0	25	1	.	I
+chrM	10414	A	A	30	0	25	1	.	=
+chrM	10415	T	T	30	0	25	1	.	I
+chrM	10416	G	N	0	0	0	1	.	*
+chrM	10417	A	A	30	0	25	1	.	5
+chrM	10418	C	C	30	0	25	1	.	I
+chrM	10419	T	T	30	0	25	1	.	I
+chrM	10420	A	A	30	0	25	1	.	<
+chrM	10421	C	C	30	0	25	1	.	I
+chrM	10422	T	T	30	0	25	1	.	I
+chrM	10423	G	N	0	0	0	1	.	'
+chrM	10424	C	C	30	0	25	1	.	I
+chrM	10425	C	C	30	0	25	1	.	I
+chrM	10426	A	N	0	0	0	1	.$	(
+chrM	10597	T	T	30	0	25	1	^:,	E
+chrM	10598	A	A	30	0	25	1	,	I
+chrM	10599	T	T	30	0	25	1	,	<
+chrM	10600	C	C	30	0	25	1	,	I
+chrM	10601	A	A	30	0	25	1	,	I
+chrM	10602	T	T	30	0	25	1	,	;
+chrM	10603	C	C	30	0	25	1	,	I
+chrM	10604	A	A	30	0	25	1	,	I
+chrM	10605	C	C	30	0	25	1	,	I
+chrM	10606	C	C	30	0	25	1	,	I
+chrM	10607	C	C	30	0	25	1	,	I
+chrM	10608	G	G	30	0	25	1	,	I
+chrM	10609	C	C	30	0	25	1	,	I
+chrM	10610	T	T	30	0	25	1	,	I
+chrM	10611	G	G	30	0	25	1	,	I
+chrM	10612	A	A	30	0	25	1	,	I
+chrM	10613	G	G	30	0	25	1	,	I
+chrM	10614	G	G	30	0	25	1	,	I
+chrM	10615	C	C	30	0	25	1	,	I
+chrM	10616	A	A	30	0	25	1	,	I
+chrM	10617	A	A	33	0	25	2	,^:,	IE
+chrM	10618	C	C	33	0	25	2	,,	II
+chrM	10619	C	C	33	0	25	2	,,	II
+chrM	10620	A	A	33	0	25	2	,,	II
+chrM	10621	A	A	33	0	25	2	,,	II
+chrM	10622	A	A	33	0	25	2	,,	II
+chrM	10623	C	C	33	0	25	2	,,	II
+chrM	10624	A	A	30	0	25	2	n,	"I
+chrM	10625	G	G	30	0	25	2	n,	"I
+chrM	10626	A	A	33	0	25	2	,,	II
+chrM	10627	A	A	33	0	25	2	,,	II
+chrM	10628	C	C	33	0	25	2	,,	II
+chrM	10629	G	G	33	0	25	2	,,	II
+chrM	10630	C	C	33	0	25	2	,,	II
+chrM	10631	C	C	33	0	25	2	,,	II
+chrM	10632	T	T	33	0	25	2	,$,	EI
+chrM	10633	G	G	30	0	25	1	,	I
+chrM	10634	A	A	30	0	25	1	,	I
+chrM	10635	A	A	30	0	25	1	,	I
+chrM	10636	C	C	30	0	25	1	,	I
+chrM	10637	G	G	30	0	25	1	,	I
+chrM	10638	C	C	30	0	25	1	,	I
+chrM	10639	A	A	30	0	25	1	,	I
+chrM	10640	G	G	30	0	25	1	,	I
+chrM	10641	G	G	30	0	25	1	,	I
+chrM	10642	C	C	30	0	25	1	,	I
+chrM	10643	C	C	30	0	25	1	,	I
+chrM	10644	T	N	0	0	0	1	n	"
+chrM	10645	C	N	0	0	0	1	n	"
+chrM	10646	T	T	30	0	25	1	,	I
+chrM	10647	A	A	30	0	25	1	,	I
+chrM	10648	C	C	30	0	25	1	,	I
+chrM	10649	T	T	30	0	25	1	,	I
+chrM	10650	T	T	30	0	25	1	,	I
+chrM	10651	C	C	30	0	25	1	,	E
+chrM	10652	C	C	30	0	25	1	,$	B
+chrM	10669	A	A	30	0	25	1	^:,	E
+chrM	10670	G	G	30	0	25	1	,	I
+chrM	10671	G	G	30	0	25	1	,	I
+chrM	10672	T	T	30	0	25	1	,	I
+chrM	10673	T	T	30	0	25	1	,	<
+chrM	10674	C	C	30	0	25	1	,	I
+chrM	10675	C	C	30	0	25	1	,	I
+chrM	10676	C	C	30	0	25	1	,	I
+chrM	10677	T	T	30	0	25	1	,	C
+chrM	10678	C	C	30	0	25	1	,	I
+chrM	10679	C	C	30	0	25	1	,	I
+chrM	10680	C	C	30	0	25	1	,	I
+chrM	10681	A	A	30	0	25	1	,	I
+chrM	10682	C	C	30	0	25	1	,	I
+chrM	10683	T	T	30	0	25	1	,	I
+chrM	10684	C	C	30	0	25	1	,	I
+chrM	10685	T	T	30	0	25	1	,	F
+chrM	10686	T	T	30	0	25	1	,	I
+chrM	10687	A	A	30	0	25	1	,	I
+chrM	10688	G	G	30	0	25	1	,	I
+chrM	10689	T	T	30	0	25	1	,	I
+chrM	10690	T	T	30	0	25	1	,	I
+chrM	10691	G	G	30	0	25	1	,	I
+chrM	10692	C	C	30	0	25	1	,	I
+chrM	10693	A	A	30	0	25	1	,	I
+chrM	10694	C	C	30	0	25	1	,	I
+chrM	10695	T	T	30	0	25	1	,	I
+chrM	10696	A	N	0	0	0	1	n	"
+chrM	10697	A	N	0	0	0	1	n	"
+chrM	10698	T	T	30	0	25	1	,	I
+chrM	10699	C	C	30	0	25	1	,	I
+chrM	10700	T	T	30	0	25	1	,	I
+chrM	10701	C	C	30	0	25	1	,	I
+chrM	10702	T	T	30	0	25	1	,	I
+chrM	10703	A	A	30	0	25	1	,	I
+chrM	10704	T	T	30	0	25	1	,$	E
+chrM	10731	T	T	30	0	25	1	^:.	E
+chrM	10732	C	C	30	0	25	1	.	I
+chrM	10733	C	C	30	0	25	1	.	I
+chrM	10734	T	T	30	0	25	1	.	I
+chrM	10735	A	A	30	0	25	1	.	I
+chrM	10736	T	T	30	0	25	1	.	I
+chrM	10737	T	T	30	0	25	1	.	I
+chrM	10738	A	N	0	0	0	1	N	"
+chrM	10739	A	N	0	0	0	1	N	"
+chrM	10740	T	T	30	0	25	1	.	I
+chrM	10741	T	T	30	0	25	1	.	I
+chrM	10742	C	C	30	0	25	1	.	I
+chrM	10743	A	A	30	0	25	1	.	I
+chrM	10744	A	A	30	0	25	1	.	I
+chrM	10745	T	T	30	0	25	1	.	I
+chrM	10746	A	A	30	0	25	1	.	I
+chrM	10747	C	C	30	0	25	1	.	I
+chrM	10748	T	T	30	0	25	1	.	I
+chrM	10749	G	G	30	0	25	1	.	I
+chrM	10750	A	A	30	0	25	1	.	I
+chrM	10751	A	A	30	0	25	1	.	I
+chrM	10752	A	A	30	0	25	1	.	I
+chrM	10753	C	C	30	0	25	1	.	I
+chrM	10754	C	C	30	0	25	1	.	I
+chrM	10755	A	A	30	0	25	1	.	I
+chrM	10756	A	A	30	0	25	1	.	F
+chrM	10757	G	G	30	0	25	1	.	I
+chrM	10758	C	C	30	0	25	1	.	I
+chrM	10759	A	A	30	0	25	1	.	I
+chrM	10760	C	C	30	0	25	1	.	I
+chrM	10761	T	T	30	0	25	1	.	I
+chrM	10762	A	A	30	0	25	1	.	@
+chrM	10763	C	C	30	0	25	1	.	I
+chrM	10764	C	C	30	0	25	1	.	I
+chrM	10765	C	C	30	0	25	1	.	I
+chrM	10766	G	G	30	0	25	1	.$	E
+chrM	10784	T	T	30	0	25	1	^:,	=
+chrM	10785	T	T	30	0	25	1	,	9
+chrM	10786	C	C	30	0	25	1	,	I
+chrM	10787	C	C	30	0	25	1	,	/
+chrM	10788	T	T	30	0	25	1	,	B
+chrM	10789	A	A	30	0	25	1	,	I
+chrM	10790	T	T	30	0	25	1	,	I
+chrM	10791	G	G	30	0	25	1	,	I
+chrM	10792	A	A	30	0	25	1	,	I
+chrM	10793	C	C	30	0	25	1	,	C
+chrM	10794	T	T	30	0	25	1	,	I
+chrM	10795	A	A	30	0	25	1	,	I
+chrM	10796	G	G	30	0	25	1	,	I
+chrM	10797	C	C	30	0	25	1	,	I
+chrM	10798	A	A	30	0	25	1	,	I
+chrM	10799	T	T	30	0	25	1	,	F
+chrM	10800	G	G	30	0	25	1	,	I
+chrM	10801	T	T	30	0	25	1	,	I
+chrM	10802	A	A	30	0	25	1	,	I
+chrM	10803	T	T	30	0	25	1	,	I
+chrM	10804	A	A	30	0	25	1	,	I
+chrM	10805	A	A	30	0	25	1	,	I
+chrM	10806	T	T	30	0	25	1	,	I
+chrM	10807	A	A	30	0	25	1	,	I
+chrM	10808	G	G	30	0	25	1	,	I
+chrM	10809	C	C	30	0	25	1	,	I
+chrM	10810	A	A	30	0	25	1	,	I
+chrM	10811	T	N	0	0	0	1	n	"
+chrM	10812	T	N	0	0	0	1	n	"
+chrM	10813	C	C	30	0	25	1	,	I
+chrM	10814	A	A	30	0	25	1	,	I
+chrM	10815	T	T	30	0	25	1	,	I
+chrM	10816	A	A	30	0	25	1	,	I
+chrM	10817	G	G	30	0	25	1	,	I
+chrM	10818	T	T	30	0	25	1	,	I
+chrM	10819	C	C	30	0	25	1	,$	E
+chrM	10864	T	T	30	0	25	1	^:,	D
+chrM	10865	G	G	30	0	25	1	,	B
+chrM	10866	T	T	30	0	25	1	,	A
+chrM	10867	A	A	30	0	25	1	,	I
+chrM	10868	G	G	30	0	25	1	,	I
+chrM	10869	A	A	30	0	25	1	,	I
+chrM	10870	A	A	30	0	25	1	,	I
+chrM	10871	G	G	30	0	25	1	,	I
+chrM	10872	C	C	30	0	25	1	,	I
+chrM	10873	C	C	30	0	25	1	,	I
+chrM	10874	C	C	30	0	25	1	,	I
+chrM	10875	C	C	30	0	25	1	,	I
+chrM	10876	A	A	30	0	25	1	,	I
+chrM	10877	A	A	30	0	25	1	,	I
+chrM	10878	T	T	30	0	25	1	,	F
+chrM	10879	T	T	30	0	25	1	,	I
+chrM	10880	G	G	30	0	25	1	,	I
+chrM	10881	C	C	30	0	25	1	,	I
+chrM	10882	C	C	30	0	25	1	,	I
+chrM	10883	G	G	30	0	25	1	,	I
+chrM	10884	G	G	30	0	25	1	,	I
+chrM	10885	A	A	30	0	25	1	,	I
+chrM	10886	T	T	30	0	25	1	,	I
+chrM	10887	C	C	30	0	25	1	,	I
+chrM	10888	C	C	30	0	25	1	,	I
+chrM	10889	A	A	30	0	25	1	,	I
+chrM	10890	T	T	30	0	25	1	,	I
+chrM	10891	A	A	30	0	25	2	n^:,	"5
+chrM	10892	G	G	30	0	25	2	n,	"7
+chrM	10893	T	T	30	0	25	2	,,	I-
+chrM	10894	G	G	33	0	25	2	,,	IC
+chrM	10895	C	C	33	0	25	2	,,	I5
+chrM	10896	T	T	30	0	25	2	,,	I,
+chrM	10897	A	A	33	0	25	2	,,	II
+chrM	10898	G	G	33	0	25	2	,,	I5
+chrM	10899	C	C	33	0	25	2	,$,	DI
+chrM	10900	A	A	30	0	25	1	,	I
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+chrM	10902	C	C	30	0	25	2	,^:,	I'
+chrM	10903	C	C	33	0	25	2	,,	IA
+chrM	10904	A	A	33	0	25	2	,,	II
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+chrM	10906	T	T	33	0	25	2	,,	II
+chrM	10907	C	C	33	0	25	2	,,	I7
+chrM	10908	T	T	33	0	25	2	,,	I=
+chrM	10909	A	A	33	0	25	2	,,	@I
+chrM	10910	C	C	33	0	25	2	,,	II
+chrM	10911	T	T	33	0	25	2	,,	ID
+chrM	10912	A	A	33	0	25	2	,,	II
+chrM	10913	A	A	33	0	25	2	,,	II
+chrM	10914	A	A	33	0	25	2	,,	II
+chrM	10915	A	A	33	0	25	2	,,	I8
+chrM	10916	C	C	33	0	25	2	,,	I6
+chrM	10917	T	T	33	0	25	2	,,	I.
+chrM	10918	A	A	30	0	25	2	n,	"I
+chrM	10919	G	G	30	0	25	2	n,	"I
+chrM	10920	G	G	33	0	25	2	,,	II
+chrM	10921	A	A	33	0	25	2	,,	II
+chrM	10922	G	G	33	0	25	2	,,	II
+chrM	10923	G	G	33	0	25	2	,,	II
+chrM	10924	C	C	33	0	25	2	,,	II
+chrM	10925	T	T	33	0	25	2	,,	II
+chrM	10926	A	A	33	0	25	2	,$,	EI
+chrM	10927	C	C	30	0	25	1	,	I
+chrM	10928	G	G	30	0	25	1	,	I
+chrM	10929	G	N	0	0	0	1	n	"
+chrM	10930	A	N	0	0	0	1	n	"
+chrM	10931	A	A	30	0	25	1	,	I
+chrM	10932	T	T	30	0	25	1	,	I
+chrM	10933	A	A	30	0	25	1	,	I
+chrM	10934	C	C	30	0	25	1	,	I
+chrM	10935	T	T	30	0	25	1	,	I
+chrM	10936	A	A	30	0	25	1	,	I
+chrM	10937	C	C	30	0	25	1	,$	7
+chrM	10991	A	A	30	0	25	1	^:.	E
+chrM	10992	T	T	30	0	25	1	.	I
+chrM	10993	A	A	30	0	25	1	.	I
+chrM	10994	C	C	30	0	25	1	.	I
+chrM	10995	T	T	30	0	25	1	.	I
+chrM	10996	A	A	30	0	25	1	.	I
+chrM	10997	T	T	30	0	25	1	.	I
+chrM	10998	C	N	0	0	0	1	N	"
+chrM	10999	C	N	0	0	0	1	N	"
+chrM	11000	C	C	30	0	25	1	.	I
+chrM	11001	T	T	30	0	25	1	.	I
+chrM	11002	G	G	30	0	25	1	.	I
+chrM	11003	T	T	30	0	25	1	.	I
+chrM	11004	G	G	30	0	25	1	.	I
+chrM	11005	A	A	30	0	25	1	.	2
+chrM	11006	G	G	30	0	25	1	.	I
+chrM	11007	G	G	30	0	25	1	.	I
+chrM	11008	A	A	30	0	25	1	.	I
+chrM	11009	A	A	30	0	25	1	.	I
+chrM	11010	T	T	30	0	25	1	.	I
+chrM	11011	A	A	30	0	25	1	.	I
+chrM	11012	A	A	30	0	25	1	.	I
+chrM	11013	T	T	30	0	25	1	.	I
+chrM	11014	C	C	30	0	25	1	.	I
+chrM	11015	A	A	30	0	25	1	.	I
+chrM	11016	T	T	30	0	25	1	.	I
+chrM	11017	A	A	30	0	25	1	.	F
+chrM	11018	A	A	30	0	25	1	.	I
+chrM	11019	C	C	30	0	25	1	.	I
+chrM	11020	T	T	30	0	25	1	.	I
+chrM	11021	A	A	30	0	25	1	.	:
+chrM	11022	G	G	30	0	25	1	.	I
+chrM	11023	T	T	30	0	25	1	.	I
+chrM	11024	T	T	30	0	25	1	.	I
+chrM	11025	C	C	30	0	25	1	.	E
+chrM	11026	C	C	30	0	25	1	.$	B
+chrM	11036	C	C	30	0	25	1	^:,	E
+chrM	11037	G	G	30	0	25	1	,	I
+chrM	11038	A	A	30	0	25	1	,	I
+chrM	11039	C	C	30	0	25	1	,	I
+chrM	11040	A	A	30	0	25	1	,	I
+chrM	11041	A	A	30	0	25	1	,	I
+chrM	11042	A	A	30	0	25	1	,	I
+chrM	11043	C	C	30	0	25	1	,	I
+chrM	11044	C	C	30	0	25	1	,	I
+chrM	11045	G	G	30	0	25	1	,	I
+chrM	11046	A	A	30	0	25	1	,	I
+chrM	11047	T	T	30	0	25	1	,	I
+chrM	11048	C	C	30	0	25	1	,	I
+chrM	11049	T	T	30	0	25	1	,	I
+chrM	11050	A	A	30	0	25	1	,	I
+chrM	11051	A	A	30	0	25	1	,	I
+chrM	11052	A	A	30	0	25	1	,	I
+chrM	11053	A	A	30	0	25	1	,	I
+chrM	11054	T	T	30	0	25	1	,	I
+chrM	11055	C	C	30	0	25	1	,	I
+chrM	11056	A	A	30	0	25	1	,	I
+chrM	11057	C	C	30	0	25	1	,	I
+chrM	11058	T	T	30	0	25	1	,	I
+chrM	11059	T	T	30	0	25	1	,	I
+chrM	11060	A	A	30	0	25	1	,	I
+chrM	11061	T	T	30	0	25	1	,	I
+chrM	11062	T	T	30	0	25	1	,	I
+chrM	11063	G	N	0	0	0	1	n	"
+chrM	11064	C	N	0	0	0	1	n	"
+chrM	11065	A	A	30	0	25	1	,	I
+chrM	11066	T	T	30	0	25	1	,	I
+chrM	11067	A	A	30	0	25	1	,	I
+chrM	11068	C	C	30	0	25	1	,	I
+chrM	11069	T	T	30	0	25	1	,	I
+chrM	11070	C	C	30	0	25	1	,	E
+chrM	11071	C	C	30	0	25	1	,$	A
+chrM	11086	A	A	30	0	25	1	^:,	E
+chrM	11087	G	G	30	0	25	1	,	1
+chrM	11088	C	N	0	0	0	1	,	'
+chrM	11089	C	C	30	0	25	1	,	=
+chrM	11090	C	C	30	0	25	1	,	D
+chrM	11091	T	T	30	0	25	1	,	0
+chrM	11092	A	A	30	0	25	1	,	I
+chrM	11093	G	G	30	0	25	1	,	@
+chrM	11094	T	T	30	0	25	1	,	4
+chrM	11095	A	A	30	0	25	1	,	I
+chrM	11096	A	A	30	0	25	1	,	I
+chrM	11097	T	T	30	0	25	1	,	A
+chrM	11098	C	C	30	0	25	1	,	I
+chrM	11099	G	G	30	0	25	1	,	I
+chrM	11100	T	T	30	0	25	1	,	D
+chrM	11101	A	A	30	0	25	1	,	I
+chrM	11102	G	G	30	0	25	1	,	I
+chrM	11103	C	C	30	0	25	1	,	I
+chrM	11104	C	C	30	0	25	1	,	I
+chrM	11105	G	G	30	0	25	1	,	I
+chrM	11106	T	T	30	0	25	1	,	I
+chrM	11107	C	C	30	0	25	1	,	I
+chrM	11108	C	C	30	0	25	1	,	I
+chrM	11109	T	T	30	0	25	1	,	I
+chrM	11110	C	C	30	0	25	1	,	I
+chrM	11111	A	A	30	0	25	1	,	I
+chrM	11112	T	T	30	0	25	1	,	I
+chrM	11113	C	N	0	0	0	1	n	"
+chrM	11114	C	N	0	0	0	1	n	"
+chrM	11115	A	A	30	0	25	1	,	I
+chrM	11116	A	A	30	0	25	1	,	I
+chrM	11117	A	A	30	0	25	1	,	I
+chrM	11118	C	C	30	0	25	1	,	I
+chrM	11119	A	A	30	0	25	1	,	I
+chrM	11120	C	C	30	0	25	1	,	E
+chrM	11121	C	C	30	0	25	1	,$	B
+chrM	11375	A	A	30	0	25	1	^:.	D
+chrM	11376	T	T	30	0	25	1	.	I
+chrM	11377	T	T	30	0	25	1	.	I
+chrM	11378	A	A	30	0	25	1	.	I
+chrM	11379	C	C	30	0	25	1	.	I
+chrM	11380	C	C	30	0	25	1	.	I
+chrM	11381	A	A	30	0	25	1	.	I
+chrM	11382	T	N	0	0	0	1	N	"
+chrM	11383	T	N	0	0	0	1	N	"
+chrM	11384	A	A	30	0	25	1	.	I
+chrM	11385	T	T	30	0	25	1	.	I
+chrM	11386	C	C	30	0	25	1	.	I
+chrM	11387	C	C	30	0	25	1	.	I
+chrM	11388	T	T	30	0	25	1	.	I
+chrM	11389	A	A	30	0	25	1	.	I
+chrM	11390	A	A	30	0	25	1	.	I
+chrM	11391	T	T	30	0	25	1	.	I
+chrM	11392	A	A	30	0	25	1	.	G
+chrM	11393	G	G	30	0	25	1	.	I
+chrM	11394	G	G	30	0	25	1	.	I
+chrM	11395	A	A	30	0	25	1	.	I
+chrM	11396	G	G	30	0	25	1	.	I
+chrM	11397	C	C	30	0	25	1	.	I
+chrM	11398	C	C	30	0	25	1	.	I
+chrM	11399	A	A	30	0	25	1	.	I
+chrM	11400	A	A	30	0	25	1	.	I
+chrM	11401	T	T	30	0	25	1	.	I
+chrM	11402	A	A	30	0	25	1	.	I
+chrM	11403	T	T	30	0	25	1	.	I
+chrM	11404	C	C	30	0	25	1	.	I
+chrM	11405	A	A	30	0	25	1	.	@
+chrM	11406	C	C	30	0	25	1	.	I
+chrM	11407	C	C	30	0	25	1	.	I
+chrM	11408	A	A	30	0	25	1	.	4
+chrM	11409	T	T	30	0	25	1	.	I
+chrM	11410	C	C	30	0	25	1	.$	C
+chrM	11457	A	A	30	0	25	1	^:.	>
+chrM	11458	A	A	30	0	25	1	.	>
+chrM	11459	T	T	30	0	25	1	.	I
+chrM	11460	A	A	30	0	25	1	.	I
+chrM	11461	C	C	30	0	25	1	.	I
+chrM	11462	A	A	30	0	25	1	.	I
+chrM	11463	C	C	30	0	25	1	.	I
+chrM	11464	A	N	0	0	0	1	N	"
+chrM	11465	C	N	0	0	0	1	N	"
+chrM	11466	A	A	30	0	25	1	.	I
+chrM	11467	C	C	30	0	25	1	.	I
+chrM	11468	C	C	30	0	25	1	.	I
+chrM	11469	A	A	30	0	25	1	.	I
+chrM	11470	T	T	30	0	25	1	.	I
+chrM	11471	A	A	30	0	25	1	.	I
+chrM	11472	T	T	30	0	25	1	.	I
+chrM	11473	C	C	30	0	25	1	.	I
+chrM	11474	A	A	30	0	25	1	.	I
+chrM	11475	A	A	30	0	25	1	.	I
+chrM	11476	C	C	30	0	25	1	.	I
+chrM	11477	A	A	30	0	25	1	.	I
+chrM	11478	G	G	30	0	25	1	.	I
+chrM	11479	C	C	30	0	25	1	.	I
+chrM	11480	A	A	30	0	25	1	.	I
+chrM	11481	T	T	30	0	25	1	.	I
+chrM	11482	T	T	30	0	25	1	.	I
+chrM	11483	A	A	30	0	25	1	.	I
+chrM	11484	A	A	30	0	25	1	.	I
+chrM	11485	A	A	30	0	25	1	.	I
+chrM	11486	C	C	30	0	25	1	.	I
+chrM	11487	C	C	30	0	25	1	.	I
+chrM	11488	T	T	30	0	25	1	.	I
+chrM	11489	T	T	30	0	25	1	.	I
+chrM	11490	C	C	30	0	25	1	.	I
+chrM	11491	A	A	30	0	25	1	.	@
+chrM	11492	T	T	30	0	25	1	.$	>
+chrM	11616	G	G	30	0	25	1	^:,	E
+chrM	11617	A	A	30	0	25	1	,	I
+chrM	11618	T	T	30	0	25	1	,	9
+chrM	11619	C	C	30	0	25	1	,	I
+chrM	11620	T	T	30	0	25	1	,	I
+chrM	11621	A	A	30	0	25	1	,	I
+chrM	11622	G	G	30	0	25	1	,	I
+chrM	11623	A	A	30	0	25	1	,	I
+chrM	11624	A	A	30	0	25	1	,	I
+chrM	11625	A	A	30	0	25	1	,	I
+chrM	11626	C	C	30	0	25	1	,	I
+chrM	11627	A	A	30	0	25	1	,	I
+chrM	11628	G	G	30	0	25	1	,	I
+chrM	11629	A	A	30	0	25	1	,	I
+chrM	11630	A	A	30	0	25	1	,	I
+chrM	11631	A	A	30	0	25	1	,	I
+chrM	11632	C	C	30	0	25	1	,	I
+chrM	11633	T	T	30	0	25	1	,	I
+chrM	11634	T	T	30	0	25	1	,	I
+chrM	11635	A	A	30	0	25	1	,	I
+chrM	11636	A	A	30	0	25	1	,	I
+chrM	11637	T	T	30	0	25	1	,	I
+chrM	11638	A	A	30	0	25	1	,	I
+chrM	11639	T	T	30	0	25	1	,	I
+chrM	11640	T	T	30	0	25	1	,	I
+chrM	11641	T	T	30	0	25	1	,	I
+chrM	11642	C	C	30	0	25	1	,	I
+chrM	11643	T	N	0	0	0	1	n	"
+chrM	11644	T	N	0	0	0	1	n	"
+chrM	11645	A	A	30	0	25	1	,	I
+chrM	11646	T	T	30	0	25	1	,	I
+chrM	11647	T	T	30	0	25	1	,	I
+chrM	11648	T	T	30	0	25	1	,	I
+chrM	11649	A	A	30	0	25	1	,	I
+chrM	11650	C	C	30	0	25	1	,	E
+chrM	11651	C	C	30	0	25	1	,$	B
+chrM	11721	A	A	30	0	25	1	^:.	E
+chrM	11722	G	G	30	0	25	1	.	I
+chrM	11723	G	G	30	0	25	1	.	I
+chrM	11724	A	A	30	0	25	1	.	I
+chrM	11725	T	T	30	0	25	1	.	I
+chrM	11726	A	A	30	0	25	1	.	I
+chrM	11727	G	G	30	0	25	1	.	I
+chrM	11728	G	N	0	0	0	1	N	"
+chrM	11729	A	N	0	0	0	1	N	"
+chrM	11730	G	G	30	0	25	1	.	I
+chrM	11731	C	C	30	0	25	1	.	I
+chrM	11732	T	T	30	0	25	1	.	I
+chrM	11733	A	A	30	0	25	1	.	I
+chrM	11734	T	T	30	0	25	1	.	I
+chrM	11735	C	C	30	0	25	1	.	I
+chrM	11736	C	C	30	0	25	1	.	I
+chrM	11737	G	G	30	0	25	1	.	I
+chrM	11738	T	T	30	0	25	1	.	I
+chrM	11739	T	T	30	0	25	1	.	I
+chrM	11740	G	G	30	0	25	1	.	I
+chrM	11741	G	G	30	0	25	1	.	I
+chrM	11742	T	T	30	0	25	1	.	I
+chrM	11743	C	C	30	0	25	1	.	I
+chrM	11744	T	T	30	0	25	1	.	I
+chrM	11745	T	T	30	0	25	1	.	I
+chrM	11746	A	A	30	0	25	1	.	I
+chrM	11747	G	G	30	0	25	1	.	I
+chrM	11748	G	G	30	0	25	1	.	I
+chrM	11749	A	A	30	0	25	1	.	F
+chrM	11750	A	A	30	0	25	1	.	I
+chrM	11751	C	C	30	0	25	1	.	I
+chrM	11752	C	C	30	0	25	1	.	I
+chrM	11753	A	A	30	0	25	1	.	>
+chrM	11754	A	A	30	0	25	1	.	:
+chrM	11755	A	A	30	0	25	1	.	6
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+chrM	12013	C	C	30	0	25	1	^:,	>
+chrM	12014	C	C	30	0	25	1	,	>
+chrM	12015	T	T	30	0	25	1	,	I
+chrM	12016	A	A	30	0	25	1	,	I
+chrM	12017	A	A	30	0	25	1	,	I
+chrM	12018	G	G	30	0	25	1	,	I
+chrM	12019	C	C	30	0	25	1	,	I
+chrM	12020	T	T	30	0	25	1	,	I
+chrM	12021	T	T	30	0	25	1	,	F
+chrM	12022	C	C	30	0	25	1	,	I
+chrM	12023	A	A	30	0	25	1	,	I
+chrM	12024	A	A	30	0	25	1	,	I
+chrM	12025	A	A	30	0	25	1	,	I
+chrM	12026	C	C	30	0	25	1	,	I
+chrM	12027	T	T	30	0	25	1	,	I
+chrM	12028	A	A	30	0	25	1	,	I
+chrM	12029	G	G	30	0	25	1	,	I
+chrM	12030	A	A	30	0	25	1	,	I
+chrM	12031	T	T	30	0	25	1	,	I
+chrM	12032	T	T	30	0	25	1	,	I
+chrM	12033	A	A	30	0	25	1	,	I
+chrM	12034	C	C	30	0	25	1	,	I
+chrM	12035	T	T	30	0	25	1	,	I
+chrM	12036	T	T	30	0	25	1	,	I
+chrM	12037	C	C	30	0	25	1	,	I
+chrM	12038	T	T	30	0	25	1	,	I
+chrM	12039	C	C	30	0	25	1	,	I
+chrM	12040	A	N	0	0	0	1	n	"
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+chrM	12042	T	T	30	0	25	1	,	I
+chrM	12043	A	A	30	0	25	1	,	I
+chrM	12044	A	A	30	0	25	1	,	I
+chrM	12045	T	T	30	0	25	1	,	E
+chrM	12046	T	T	30	0	25	1	,	B
+chrM	12047	T	T	30	0	25	1	,	A
+chrM	12048	T	T	30	0	25	1	,$	?
+chrM	12295	A	A	30	0	25	1	^:.	B
+chrM	12296	A	A	30	0	25	1	.	E
+chrM	12297	T	T	30	0	25	1	.	I
+chrM	12298	C	C	30	0	25	1	.	I
+chrM	12299	C	C	30	0	25	1	.	I
+chrM	12300	T	T	30	0	25	1	.	I
+chrM	12301	T	T	30	0	25	1	.	I
+chrM	12302	T	N	0	0	0	1	N	"
+chrM	12303	A	N	0	0	0	1	N	"
+chrM	12304	T	T	30	0	25	1	.	I
+chrM	12305	A	A	30	0	25	1	.	I
+chrM	12306	A	A	30	0	25	1	.	I
+chrM	12307	C	C	30	0	25	1	.	I
+chrM	12308	C	C	30	0	25	1	.	I
+chrM	12309	G	G	30	0	25	1	.	I
+chrM	12310	C	C	30	0	25	1	.	I
+chrM	12311	A	A	30	0	25	1	.	I
+chrM	12312	T	T	30	0	25	1	.	I
+chrM	12313	C	C	30	0	25	1	.	I
+chrM	12314	G	G	30	0	25	1	.	I
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+chrM	12316	G	G	30	0	25	1	.	I
+chrM	12317	G	G	30	0	25	1	.	I
+chrM	12318	A	A	30	0	25	1	.	I
+chrM	12319	T	T	30	0	25	1	.	I
+chrM	12320	A	A	30	0	25	1	.	I
+chrM	12321	T	T	30	0	25	1	.	I
+chrM	12322	C	C	30	0	25	1	.	I
+chrM	12323	G	G	30	0	25	1	.	I
+chrM	12324	G	G	30	0	25	1	.	I
+chrM	12325	C	C	30	0	25	1	.	I
+chrM	12326	T	T	30	0	25	1	.	I
+chrM	12327	T	T	30	0	25	1	.	I
+chrM	12328	C	C	30	0	25	1	.	:
+chrM	12329	A	N	0	0	0	1	.	(
+chrM	12330	T	T	30	0	25	1	.$	D
+chrM	12387	T	T	30	0	25	1	^:,	E
+chrM	12388	C	C	30	0	25	1	,	I
+chrM	12389	A	A	30	0	25	1	,	I
+chrM	12390	T	T	30	0	25	1	,	H
+chrM	12391	A	A	30	0	25	1	,	I
+chrM	12392	C	C	30	0	25	1	,	I
+chrM	12393	T	T	30	0	25	1	,	;
+chrM	12394	C	C	30	0	25	1	,	I
+chrM	12395	G	G	30	0	25	1	,	I
+chrM	12396	A	A	30	0	25	1	,	I
+chrM	12397	C	C	30	0	25	1	,	I
+chrM	12398	C	C	30	0	25	1	,	I
+chrM	12399	C	C	30	0	25	1	,	I
+chrM	12400	C	C	30	0	25	1	,	I
+chrM	12401	A	A	30	0	25	1	,	I
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+chrM	12403	C	C	30	0	25	1	,	I
+chrM	12404	C	C	30	0	25	1	,	I
+chrM	12405	T	T	30	0	25	1	,	I
+chrM	12406	T	T	30	0	25	1	,	I
+chrM	12407	A	A	30	0	25	1	,	I
+chrM	12408	C	C	30	0	25	1	,	I
+chrM	12409	C	C	30	0	25	1	,	I
+chrM	12410	A	A	30	0	25	1	,	I
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+chrM	12413	C	C	30	0	25	1	,	I
+chrM	12414	T	N	0	0	0	1	n	"
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+chrM	12416	C	C	30	0	25	1	,	I
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+chrM	12420	T	T	30	0	25	1	,	I
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+chrM	12422	C	C	30	0	25	1	,$	B
+chrM	12584	G	G	30	0	25	1	^:.	E
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+chrM	12586	A	A	30	0	25	1	.	I
+chrM	12587	A	A	30	0	25	1	.	I
+chrM	12588	A	A	30	0	25	1	.	I
+chrM	12589	C	C	30	0	25	1	.	I
+chrM	12590	A	A	30	0	25	1	.	I
+chrM	12591	A	N	0	0	0	1	N	"
+chrM	12592	C	N	0	0	0	1	N	"
+chrM	12593	A	A	30	0	25	1	.	I
+chrM	12594	A	A	30	0	25	1	.	I
+chrM	12595	A	A	30	0	25	1	.	I
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+chrM	12597	C	C	30	0	25	1	.	I
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+chrM	12988	G	G	30	0	25	1	^:.	E
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+chrM	12995	A	N	0	0	0	1	N	"
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+chrM	12997	C	C	30	0	25	1	.	I
+chrM	12998	G	G	30	0	25	1	.	I
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+chrM	13011	T	T	30	0	25	1	.	I
+chrM	13012	A	N	0	0	0	1	.	(
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+chrM	13017	C	C	30	0	25	1	.	I
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+chrM	13587	T	N	0	0	0	1	n	"
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+chrM	13594	C	C	30	0	25	1	,	E
+chrM	13595	C	C	30	0	25	1	,$	A
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+chrM	13790	T	N	0	0	0	1	N	"
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+chrM	14028	C	N	0	0	0	1	,	&
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+chrM	14054	A	A	33	0	25	2	,,	II
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+chrM	14472	C	C	30	0	25	1	,	I
+chrM	14473	A	A	30	0	25	1	,	I
+chrM	14474	T	T	30	0	25	1	,	I
+chrM	14475	T	T	30	0	25	1	,	I
+chrM	14476	C	C	30	0	25	1	,	I
+chrM	14477	A	A	30	0	25	1	,	I
+chrM	14478	C	C	30	0	25	1	,	I
+chrM	14479	G	G	30	0	25	1	,	I
+chrM	14480	T	T	30	0	25	1	,	I
+chrM	14481	A	A	30	0	25	1	,	I
+chrM	14482	G	G	30	0	25	1	,	I
+chrM	14483	G	G	30	0	25	1	,	I
+chrM	14484	A	A	30	0	25	1	,	I
+chrM	14485	C	C	30	0	25	1	,	I
+chrM	14486	G	G	30	0	25	1	,	I
+chrM	14487	C	C	30	0	25	1	,	I
+chrM	14488	G	G	30	0	25	1	,	I
+chrM	14489	G	G	30	0	25	1	,	I
+chrM	14490	C	N	0	0	0	1	n	"
+chrM	14491	C	N	0	0	0	1	n	"
+chrM	14492	T	T	30	0	25	1	,	I
+chrM	14493	C	C	30	0	25	1	,	I
+chrM	14494	T	T	30	0	25	1	,	I
+chrM	14495	A	A	30	0	25	1	,	I
+chrM	14496	C	C	30	0	25	1	,	I
+chrM	14497	T	T	30	0	25	1	,	I
+chrM	14498	A	A	30	0	25	1	,$	E
+chrM	14866	A	A	30	0	25	1	^:,	A
+chrM	14867	A	A	30	0	25	1	,	6
+chrM	14868	A	A	30	0	25	1	,	E
+chrM	14869	G	G	30	0	25	1	,	3
+chrM	14870	A	N	0	0	0	1	,	,
+chrM	14871	C	N	0	0	0	1	,	'
+chrM	14872	A	A	30	0	25	1	,	9
+chrM	14873	T	T	30	0	25	1	,	4
+chrM	14874	C	C	30	0	25	1	,	I
+chrM	14875	C	C	30	0	25	1	,	I
+chrM	14876	T	T	30	0	25	1	,	A
+chrM	14877	A	A	30	0	25	1	,	I
+chrM	14878	G	N	0	0	0	1	,	(
+chrM	14879	G	G	30	0	25	1	,	I
+chrM	14880	A	A	30	0	25	1	,	A
+chrM	14881	C	C	30	0	25	1	,	I
+chrM	14882	T	T	30	0	25	1	,	G
+chrM	14883	C	C	30	0	25	1	,	I
+chrM	14884	C	N	0	0	0	1	,	*
+chrM	14885	T	T	30	0	25	1	,	4
+chrM	14886	C	C	30	0	25	1	,	I
+chrM	14887	C	C	30	0	25	1	,	I
+chrM	14888	T	T	30	0	25	1	,	F
+chrM	14889	C	C	30	0	25	1	,	I
+chrM	14890	C	C	30	0	25	1	,	I
+chrM	14891	T	T	30	0	25	1	,	I
+chrM	14892	G	G	30	0	25	1	,	I
+chrM	14893	A	N	0	0	0	1	n	"
+chrM	14894	T	N	0	0	0	1	n	"
+chrM	14895	C	C	30	0	25	1	,	I
+chrM	14896	T	T	30	0	25	1	,	I
+chrM	14897	T	T	30	0	25	1	,	I
+chrM	14898	G	G	30	0	25	1	,	I
+chrM	14899	C	C	30	0	25	1	,	I
+chrM	14900	T	T	30	0	25	1	,	I
+chrM	14901	C	C	30	0	25	1	,$	>
+chrM	14956	A	A	30	0	25	1	^:.	D
+chrM	14957	C	C	30	0	25	1	.	I
+chrM	14958	C	C	30	0	25	1	.	I
+chrM	14959	C	C	30	0	25	1	.	I
+chrM	14960	C	C	30	0	25	1	.	I
+chrM	14961	A	A	30	0	25	1	.	I
+chrM	14962	G	G	30	0	25	1	.	I
+chrM	14963	C	N	0	0	0	1	N	"
+chrM	14964	T	N	0	0	0	1	N	"
+chrM	14965	A	A	30	0	25	1	.	I
+chrM	14966	A	A	30	0	25	1	.	I
+chrM	14967	C	C	30	0	25	1	.	I
+chrM	14968	C	C	30	0	25	1	.	I
+chrM	14969	C	C	30	0	25	1	.	I
+chrM	14970	T	T	30	0	25	1	.	I
+chrM	14971	C	C	30	0	25	1	.	I
+chrM	14972	T	T	30	0	25	1	.	I
+chrM	14973	C	C	30	0	25	1	.	I
+chrM	14974	A	A	30	0	25	1	.	I
+chrM	14975	G	G	30	0	25	1	.	I
+chrM	14976	C	C	30	0	25	1	.	I
+chrM	14977	A	A	30	0	25	1	.	6
+chrM	14978	C	C	30	0	25	1	.	I
+chrM	14979	T	T	30	0	25	1	.	I
+chrM	14980	C	C	30	0	25	1	.	I
+chrM	14981	C	C	30	0	25	1	.	I
+chrM	14982	C	C	30	0	25	1	.	I
+chrM	14983	C	C	30	0	25	1	.	I
+chrM	14984	C	C	30	0	25	1	.	I
+chrM	14985	T	T	30	0	25	1	.	I
+chrM	14986	C	C	30	0	25	1	.	I
+chrM	14987	A	A	30	0	25	1	.	5
+chrM	14988	T	T	30	0	25	1	.	I
+chrM	14989	A	N	0	0	0	1	.	-
+chrM	14990	T	T	30	0	25	1	.	E
+chrM	14991	T	T	30	0	25	1	.$	B
+chrM	15012	G	G	30	0	25	1	^:.	E
+chrM	15013	T	T	30	0	25	1	.	I
+chrM	15014	T	T	33	0	25	2	.^:,	I>
+chrM	15015	T	T	33	0	25	2	.,	I8
+chrM	15016	G	G	33	0	25	2	.,	IA
+chrM	15017	C	C	33	0	25	2	.,	II
+chrM	15018	C	C	33	0	25	2	.,	II
+chrM	15019	T	T	30	0	25	2	N,	":
+chrM	15020	A	A	30	0	25	2	N,	"I
+chrM	15021	C	C	33	0	25	2	.,	II
+chrM	15022	G	G	33	0	25	2	.,	II
+chrM	15023	C	C	33	0	25	2	.,	II
+chrM	15024	C	C	33	0	25	2	.,	II
+chrM	15025	A	A	33	0	25	2	.,	8I
+chrM	15026	T	T	33	0	25	2	.,	II
+chrM	15027	C	C	33	0	25	2	.,	II
+chrM	15028	C	C	33	0	25	2	.,	II
+chrM	15029	T	T	33	0	25	2	.,	II
+chrM	15030	A	A	33	0	25	2	.,	II
+chrM	15031	C	C	33	0	25	2	.,	II
+chrM	15032	G	G	33	0	25	2	.,	HI
+chrM	15033	C	C	33	0	25	2	.,	II
+chrM	15034	T	T	33	0	25	2	.,	II
+chrM	15035	C	C	33	0	25	2	.,	II
+chrM	15036	C	C	33	0	25	2	.,	II
+chrM	15037	A	A	33	0	25	2	.,	6I
+chrM	15038	T	T	33	0	25	2	.,	II
+chrM	15039	T	T	33	0	25	2	.,	II
+chrM	15040	C	C	33	0	25	2	.,	II
+chrM	15041	C	C	30	0	25	2	.n	I"
+chrM	15042	C	C	30	0	25	2	.n	I"
+chrM	15043	A	A	33	0	25	2	.,	1I
+chrM	15044	A	A	33	0	25	2	.,	CI
+chrM	15045	C	C	33	0	25	2	.,	II
+chrM	15046	A	A	33	0	25	2	.,	=I
+chrM	15047	A	A	33	0	25	2	.$,	3I
+chrM	15048	A	A	30	0	25	1	,	I
+chrM	15049	C	C	30	0	25	1	,$	E
+chrM	15080	T	T	30	0	25	1	^:,	E
+chrM	15081	C	C	30	0	25	1	,	I
+chrM	15082	C	C	30	0	25	1	,	I
+chrM	15083	T	T	30	0	25	1	,	I
+chrM	15084	G	G	30	0	25	1	,	I
+chrM	15085	A	A	30	0	25	1	,	I
+chrM	15086	T	T	30	0	25	1	,	F
+chrM	15087	C	C	30	0	25	1	,	I
+chrM	15088	C	C	30	0	25	1	,	I
+chrM	15089	T	T	30	0	25	1	,	A
+chrM	15090	A	A	30	0	25	1	,	I
+chrM	15091	G	G	30	0	25	1	,	H
+chrM	15092	C	C	30	0	25	1	,	I
+chrM	15093	A	A	30	0	25	1	,	I
+chrM	15094	C	C	30	0	25	1	,	I
+chrM	15095	T	T	30	0	25	1	,	I
+chrM	15096	C	C	30	0	25	1	,	I
+chrM	15097	A	A	30	0	25	1	,	I
+chrM	15098	T	T	30	0	25	1	,	I
+chrM	15099	C	C	30	0	25	1	,	I
+chrM	15100	C	C	30	0	25	1	,	I
+chrM	15101	C	C	30	0	25	1	,	I
+chrM	15102	C	C	30	0	25	1	,	I
+chrM	15103	A	A	30	0	25	1	,	I
+chrM	15104	C	C	30	0	25	1	,	I
+chrM	15105	C	C	30	0	25	1	,	I
+chrM	15106	C	C	30	0	25	1	,	I
+chrM	15107	T	N	0	0	0	1	n	"
+chrM	15108	C	N	0	0	0	1	n	"
+chrM	15109	C	C	30	0	25	1	,	I
+chrM	15110	A	A	30	0	25	1	,	I
+chrM	15111	C	C	30	0	25	1	,	I
+chrM	15112	A	A	30	0	25	1	,	I
+chrM	15113	T	T	30	0	25	1	,	I
+chrM	15114	A	A	30	0	25	1	,	I
+chrM	15115	T	T	30	0	25	1	,$	E
+chrM	15275	T	T	30	0	25	1	^:.	D
+chrM	15276	C	C	30	0	25	1	.	I
+chrM	15277	A	A	30	0	25	1	.	I
+chrM	15278	T	T	30	0	25	1	.	I
+chrM	15279	T	T	30	0	25	1	.	I
+chrM	15280	T	T	30	0	25	1	.	I
+chrM	15281	T	T	30	0	25	1	.	I
+chrM	15282	T	N	0	0	0	1	N	"
+chrM	15283	A	N	0	0	0	1	N	"
+chrM	15284	T	T	30	0	25	1	.	I
+chrM	15285	A	A	30	0	25	1	.	I
+chrM	15286	C	C	30	0	25	1	.	I
+chrM	15287	C	C	30	0	25	1	.	I
+chrM	15288	A	A	30	0	25	1	.	I
+chrM	15289	C	C	30	0	25	1	.	I
+chrM	15290	T	T	30	0	25	1	.	I
+chrM	15291	C	C	30	0	25	1	.	I
+chrM	15292	G	G	30	0	25	1	.	I
+chrM	15293	C	C	30	0	25	1	.	I
+chrM	15294	A	A	30	0	25	1	.	I
+chrM	15295	A	A	30	0	25	1	.	I
+chrM	15296	G	G	30	0	25	1	.	I
+chrM	15297	C	C	30	0	25	1	.	I
+chrM	15298	A	A	30	0	25	1	.	I
+chrM	15299	C	C	30	0	25	1	.	I
+chrM	15300	C	C	30	0	25	1	.	I
+chrM	15301	A	A	30	0	25	1	.	@
+chrM	15302	T	T	30	0	25	1	.	I
+chrM	15303	C	C	30	0	25	1	.	=
+chrM	15304	G	G	30	0	25	1	.	I
+chrM	15305	A	A	30	0	25	1	.	7
+chrM	15306	A	A	30	0	25	1	.	9
+chrM	15307	A	A	30	0	25	1	.	I
+chrM	15308	A	A	30	0	25	1	.	6
+chrM	15309	C	C	30	0	25	1	.	I
+chrM	15310	A	A	30	0	25	1	.$	>
+chrM	15338	T	T	30	0	25	1	^:,	E
+chrM	15339	A	A	30	0	25	1	,	I
+chrM	15340	T	T	30	0	25	1	,	I
+chrM	15341	A	A	30	0	25	1	,	I
+chrM	15342	T	T	30	0	25	1	,	?
+chrM	15343	C	N	0	0	0	1	,	-
+chrM	15344	G	G	30	0	25	1	,	I
+chrM	15345	C	C	30	0	25	1	,	I
+chrM	15346	A	A	30	0	25	1	,	I
+chrM	15347	C	C	30	0	25	1	,	I
+chrM	15348	A	A	30	0	25	1	,	I
+chrM	15349	T	T	30	0	25	1	,	A
+chrM	15350	T	T	30	0	25	1	,	I
+chrM	15351	A	A	30	0	25	1	,	I
+chrM	15352	C	C	30	0	25	1	,	I
+chrM	15353	C	C	30	0	25	1	,	I
+chrM	15354	C	C	30	0	25	1	,	I
+chrM	15355	T	T	30	0	25	1	,	I
+chrM	15356	G	G	30	0	25	1	,	I
+chrM	15357	G	G	30	0	25	1	,	I
+chrM	15358	T	T	30	0	25	1	,	I
+chrM	15359	C	C	30	0	25	1	,	I
+chrM	15360	T	T	30	0	25	1	,	I
+chrM	15361	T	T	30	0	25	1	,	I
+chrM	15362	G	G	30	0	25	1	,	I
+chrM	15363	T	T	30	0	25	1	,	I
+chrM	15364	A	A	30	0	25	1	,	I
+chrM	15365	A	N	0	0	0	1	n	"
+chrM	15366	A	N	0	0	0	1	n	"
+chrM	15367	C	C	30	0	25	1	,	I
+chrM	15368	C	C	30	0	25	1	,	I
+chrM	15369	A	A	30	0	25	1	,	I
+chrM	15370	G	G	30	0	25	1	,	I
+chrM	15371	A	A	30	0	25	1	,	>
+chrM	15372	A	A	30	0	25	1	,	;
+chrM	15373	A	A	30	0	25	1	,$	:
+chrM	15787	A	A	30	0	25	1	^:,	E
+chrM	15788	T	T	30	0	25	1	,	=
+chrM	15789	C	C	30	0	25	1	,	I
+chrM	15790	C	C	30	0	25	1	,	I
+chrM	15791	T	N	0	0	0	1	,	-
+chrM	15792	C	C	30	0	25	1	,	I
+chrM	15793	G	G	30	0	25	1	,	I
+chrM	15794	C	C	30	0	25	1	,	H
+chrM	15795	T	T	30	0	25	1	,	9
+chrM	15796	C	C	30	0	25	1	,	I
+chrM	15797	C	C	30	0	25	1	,	I
+chrM	15798	G	G	30	0	25	1	,	I
+chrM	15799	G	G	30	0	25	1	,	I
+chrM	15800	G	G	30	0	25	1	,	I
+chrM	15801	C	C	30	0	25	1	,	I
+chrM	15802	C	C	30	0	25	1	,	I
+chrM	15803	C	C	30	0	25	1	,	I
+chrM	15804	A	A	30	0	25	1	,	I
+chrM	15805	T	T	30	0	25	1	,	D
+chrM	15806	C	C	30	0	25	1	,	I
+chrM	15807	C	C	30	0	25	1	,	I
+chrM	15808	A	A	30	0	25	1	,	I
+chrM	15809	A	A	30	0	25	1	,	I
+chrM	15810	A	A	30	0	25	1	,	I
+chrM	15811	C	C	30	0	25	1	,	I
+chrM	15812	G	G	30	0	25	1	,	I
+chrM	15813	T	T	30	0	25	1	,	I
+chrM	15814	G	N	0	0	0	1	n	"
+chrM	15815	G	N	0	0	0	1	n	"
+chrM	15816	G	G	30	0	25	1	,	I
+chrM	15817	G	G	30	0	25	1	,	I
+chrM	15818	G	G	30	0	25	1	,	I
+chrM	15819	T	T	30	0	25	1	,	I
+chrM	15820	T	T	30	0	25	1	,	I
+chrM	15821	T	T	30	0	25	1	,	I
+chrM	15822	C	C	30	0	25	1	,$	E
+chrM	16613	G	G	30	0	25	1	^:.	E
+chrM	16614	C	C	30	0	25	1	.	I
+chrM	16615	A	A	30	0	25	1	.	I
+chrM	16616	T	T	30	0	25	1	.	I
+chrM	16617	C	C	30	0	25	1	.	I
+chrM	16618	C	C	30	0	25	1	.	I
+chrM	16619	C	C	30	0	25	1	.	I
+chrM	16620	C	N	0	0	0	1	N	"
+chrM	16621	C	N	0	0	0	1	N	"
+chrM	16622	T	T	30	0	25	1	.	I
+chrM	16623	A	A	30	0	25	1	.	I
+chrM	16624	G	G	30	0	25	1	.	I
+chrM	16625	A	A	30	0	25	1	.	@
+chrM	16626	T	T	30	0	25	1	.	I
+chrM	16627	C	C	30	0	25	1	.	I
+chrM	16628	T	T	30	0	25	1	.	I
+chrM	16629	A	A	30	0	25	1	.	I
+chrM	16630	A	N	0	0	0	1	.	+
+chrM	16631	T	T	30	0	25	1	.	I
+chrM	16632	T	T	30	0	25	1	.	I
+chrM	16633	T	T	30	0	25	1	.	I
+chrM	16634	T	T	30	0	25	1	.	I
+chrM	16635	C	C	30	0	25	1	.	I
+chrM	16636	T	T	30	0	25	1	.	I
+chrM	16637	A	A	30	0	25	1	.	8
+chrM	16638	A	A	30	0	25	1	.	H
+chrM	16639	A	A	30	0	25	1	.	8
+chrM	16640	T	T	30	0	25	1	.	I
+chrM	16641	C	C	30	0	25	1	.	I
+chrM	16642	T	T	30	0	25	1	.	I
+chrM	16643	G	G	30	0	25	1	.	I
+chrM	16644	T	T	30	0	25	1	.	I
+chrM	16645	C	C	30	0	25	1	.	I
+chrM	16646	A	A	30	0	25	1	.	I
+chrM	16647	A	A	30	0	25	1	.	C
+chrM	16648	C	C	30	0	25	1	.$	>
diff -r 000000000000 -r 95612c159681 test-data/sam_to_bam_in1.sam
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sam_to_bam_in1.sam	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,13 @@
+@HD	VN:1.0	SO:coordinate
+@SQ	SN:chrM	LN:100001
+@RG	ID:rg1	SM:s1
+HWI-EAS91_1_30788AAXX:1:1:1513:715	16	chrM	9563	25	36M	*	0	0	CTGACTACCACAACTAAACATCTATGCNNAAAAAAC	I+-II?IDIIIIIIIIIIIIIIIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1698:516	16	chrM	2735	25	36M	*	0	0	TTTACACTCAGAGGTTCAACTCCTCTCNNTAACAAC	I9IIIII5IIIIIIIIIIIIIIIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1491:637	16	chrM	10864	25	36M	*	0	0	TGTAGAAGCCCCAATTGCCGGATCCATNNTGCTAGC	DBAIIIIIIIIIIIFIIIIIIIIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1711:249	16	chrM	10617	25	36M	*	0	0	ACCAAACAGAACGCCTGAACGCAGGCCNNTACTTCC	IIIIIIIIIIIIIIIIIIIIIIIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1634:211	0	chrM	9350	25	36M	*	0	0	GAAGCAGNNGCTTGATACTGACACTTCGTCGACGTA	IIIIIII""IIIIIIIIIIIIIIIIIIIIII9IIDF	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1218:141	16	chrM	14062	25	36M	*	0	0	ACAAAACTAACAACAAAAATAACACTCNNAATAAAC	I+IIII1IIIIIIIIIIIIIIIIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1398:854	16	chrM	3921	25	36M	*	0	0	CACCCTTCCCGTACTAATAAATCCCCTNNTCTTCAC	IIIII=AIIIIIIIIIIIIIIBIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1310:991	16	chrM	10002	25	36M	*	0	0	CTCCTATGCCTAGAAGGAATAATACTANNACTATTC	I:2IEI:IIDIIIIII4IIIIIIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1716:413	0	chrM	6040	25	36M	*	0	0	GATCCAANNCTTTATCAACACCTATTCTGATTCTTC	IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
+HWI-EAS91_1_30788AAXX:1:1:1630:59	16	chrM	12387	25	36M	*	0	0	TCATACTCGACCCCAACCTTACCAACCNNCCGCTCC	FIIHII;IIIIIIIIIIIIIIIIIIII""IIIIIII	NM:i:1	X1:i:1	MD:Z:7N0N27	RG:Z:rg1
diff -r 000000000000 -r 95612c159681 test-data/sam_to_bam_out1.bam
Binary file test-data/sam_to_bam_out1.bam has changed
diff -r 000000000000 -r 95612c159681 test-data/sam_to_bam_out2.bam
Binary file test-data/sam_to_bam_out2.bam has changed
diff -r 000000000000 -r 95612c159681 tool-data/sam_fa_indices.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/sam_fa_indices.loc.sample	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,28 @@
+#This is a sample file distributed with Galaxy that enables tools
+#to use a directory of Samtools indexed sequences data files.  You will need
+#to create these data files and then create a sam_fa_indices.loc file 
+#similar to this one (store it in this directory) that points to 
+#the directories in which those files are stored. The sam_fa_indices.loc 
+#file has this format (white space characters are TAB characters):
+#
+#index	<seq>	<location>
+#
+#So, for example, if you had hg18 indexed stored in 
+#/depot/data2/galaxy/sam/, 
+#then the sam_fa_indices.loc entry would look like this:
+#
+#index	hg18	/depot/data2/galaxy/sam/hg18.fa
+#
+#and your /depot/data2/galaxy/sam/ directory
+#would contain hg18.fa and hg18.fa.fai files:
+#
+#-rw-r--r--  1 james    universe 830134 2005-09-13 10:12 hg18.fa
+#-rw-r--r--  1 james    universe 527388 2005-09-13 10:12 hg18.fa.fai
+#
+#Your sam_fa_indices.loc file should include an entry per line for 
+#each index set you have stored.  The file in the path does actually
+#exist, but it should never be directly used. Instead, the name serves
+#as a prefix for the index file.  For example:
+#
+#index	hg18	/depot/data2/galaxy/sam/hg18.fa
+#index	hg19	/depot/data2/galaxy/sam/hg19.fa
diff -r 000000000000 -r 95612c159681 tool-data/tool_data_table_conf.xml.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/tool_data_table_conf.xml.sample	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,8 @@
+<!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
+<tables>
+    <!-- Location of SAMTools indexes and other files -->
+    <table name="sam_fa_indexes" comment_char="#">
+        <columns>line_type, value, path</columns>
+        <file path="tool-data/sam_fa_indices.loc" />
+    </table>
+</tables>
\ No newline at end of file
diff -r 000000000000 -r 95612c159681 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Aug 26 14:21:12 2013 -0400
@@ -0,0 +1,6 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="samtools" version="0.1.16">
+        <repository changeset_revision="75367f13eb3c" name="package_samtools_0_1_16" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+    </package>
+</tool_dependency>