comparison macros.xml @ 6:2d7f0d455ad4 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_reheader commit c508c3af0f4121dcc38e0be63db00a604e997b8a

5:85e38b31e8b3

        tool's version is controlled by the TOOL_VERSION token 
        (because their version is ahead of the requirement version .. 
         please only bump the minor version in order to let the requirement
         version catch up eventually). To find the tools check:
        `grep "<tool" . -r | grep -v VERSION_SUFFIX | cut -d":" -f 1` -->
    <token name="@TOOL_VERSION@">1.20</token>
    <token name="@VERSION_SUFFIX@">2</token>
    <token name="@PROFILE@">22.05</token>
    <token name="@FLAGS@"><![CDATA[
        #set $flags = 0
        #if $filter
            #set $flags = sum(map(int, str($filter).split(',')))

    </xml>

    <xml name="citations">
        <citations>
            <citation type="doi">10.1093/gigascience/giab008</citation>
        </citations>
    </xml>
    <xml name="version_command">
        <version_command><![CDATA[samtools 2>&1 | grep Version]]></version_command>
    </xml>

6:2d7f0d455ad4

        tool's version is controlled by the TOOL_VERSION token 
        (because their version is ahead of the requirement version .. 
         please only bump the minor version in order to let the requirement
         version catch up eventually). To find the tools check:
        `grep "<tool" . -r | grep -v VERSION_SUFFIX | cut -d":" -f 1` -->
    <token name="@TOOL_VERSION@">1.21</token>
    <token name="@VERSION_SUFFIX@">0</token>
    <token name="@PROFILE@">22.05</token>
    <token name="@FLAGS@"><![CDATA[
        #set $flags = 0
        #if $filter
            #set $flags = sum(map(int, str($filter).split(',')))

    </xml>

    <xml name="citations">
        <citations>
            <citation type="doi">10.1093/gigascience/giab008</citation>
            <citation type="doi">10.1093/bioinformatics/btr076</citation>
        </citations>
    </xml>
    <xml name="version_command">
        <version_command><![CDATA[samtools 2>&1 | grep Version]]></version_command>
    </xml>