Mercurial > repos > devteam > samtools_rmdup
comparison samtools_rmdup.xml @ 1:fe83e6f8e65e draft
Uploaded tool and dependency definitions that specify samtools version 0.1.19.
| author | devteam |
|---|---|
| date | Thu, 27 Mar 2014 15:26:52 -0400 |
| parents | 7e92b2a53aab |
| children | 3735f950b2f5 |
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| 0:7e92b2a53aab | 1:fe83e6f8e65e |
|---|---|
| 1 <tool id="samtools_rmdup" name="rmdup" version="1.0.0"> | 1 <tool id="samtools_rmdup" name="rmdup" version="1.0.1"> |
| 2 <requirements> | 2 <requirements> |
| 3 <requirement type="package" version="0.1.18">samtools</requirement> | 3 <requirement type="package" version="0.1.19">samtools</requirement> |
| 4 </requirements> | 4 </requirements> |
| 5 <description>remove PCR duplicates</description> | 5 <description>remove PCR duplicates</description> |
| 6 <command>samtools rmdup | 6 <command>samtools rmdup |
| 7 #if str( $bam_paired_end_type.bam_paired_end_type_selector ) == "PE" | 7 #if str( $bam_paired_end_type.bam_paired_end_type_selector ) == "PE" |
| 8 ${bam_paired_end_type.force_se} | 8 ${bam_paired_end_type.force_se} |