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comparison test-data/samtools_stats_out1.tab @ 3:95a7ddf617e7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
author iuc
date Thu, 27 Sep 2018 09:05:10 -0400
parents 24c5d43cb545
children e28839a4b932
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2:24c5d43cb545 3:95a7ddf617e7
1 # This file was produced by samtools stats (1.3.1+htslib-1.3.1) and can be plotted using plot-bamstats 1 # This file was produced by samtools stats (1.9+htslib-1.9) and can be plotted using plot-bamstats
2 # This file contains statistics for all reads. 2 # This file contains statistics for all reads.
3 # The command line was: stats --coverage 1,1000,1 --GC-depth 20000.0 --insert-size 8000 --most-inserts 0.99 --trim-quality 0 --ref-seq /tmp/tmpO1aTrb/files/000/dataset_2.dat /tmp/tmpO1aTrb/files/000/dataset_1.dat 3 # The command line was: stats --ref-seq reference.fa infile
4 # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities 4 # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities
5 # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow) 5 # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow)
6 CHK 1bd20fd8 58ad2167 29883386 6 CHK 1bd20fd8 58ad2167 29883386
7 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part. 7 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part.
8 SN raw total sequences: 200 8 SN raw total sequences: 200
19 SN reads duplicated: 0 # PCR or optical duplicate bit set 19 SN reads duplicated: 0 # PCR or optical duplicate bit set
20 SN reads MQ0: 6 # mapped and MQ=0 20 SN reads MQ0: 6 # mapped and MQ=0
21 SN reads QC failed: 0 21 SN reads QC failed: 0
22 SN non-primary alignments: 0 22 SN non-primary alignments: 0
23 SN total length: 50200 # ignores clipping 23 SN total length: 50200 # ignores clipping
24 SN total first fragment length: 25100 # ignores clipping
25 SN total last fragment length: 25100 # ignores clipping
24 SN bases mapped: 6275 # ignores clipping 26 SN bases mapped: 6275 # ignores clipping
25 SN bases mapped (cigar): 6275 # more accurate 27 SN bases mapped (cigar): 6275 # more accurate
26 SN bases trimmed: 0 28 SN bases trimmed: 0
27 SN bases duplicated: 0 29 SN bases duplicated: 0
28 SN mismatches: 591 # from NM fields 30 SN mismatches: 591 # from NM fields
29 SN error rate: 9.418327e-02 # mismatches / bases mapped (cigar) 31 SN error rate: 9.418327e-02 # mismatches / bases mapped (cigar)
30 SN average length: 251 32 SN average length: 251
33 SN average first fragment length: 251
34 SN average last fragment length: 251
31 SN maximum length: 251 35 SN maximum length: 251
36 SN maximum first fragment length: 251
37 SN maximum last fragment length: 251
32 SN average quality: 34.7 38 SN average quality: 34.7
33 SN insert size average: 0.0 39 SN insert size average: 0.0
34 SN insert size standard deviation: 0.0 40 SN insert size standard deviation: 0.0
35 SN inward oriented pairs: 0 41 SN inward oriented pairs: 0
36 SN outward oriented pairs: 0 42 SN outward oriented pairs: 0
37 SN pairs with other orientation: 0 43 SN pairs with other orientation: 0
38 SN pairs on different chromosomes: 0 44 SN pairs on different chromosomes: 0
39 # First Fragment Qualitites. Use `grep ^FFQ | cut -f 2-` to extract this part. 45 SN percentage of properly paired reads (%): 0.0
46 # First Fragment Qualities. Use `grep ^FFQ | cut -f 2-` to extract this part.
40 # Columns correspond to qualities and rows to cycles. First column is the cycle number. 47 # Columns correspond to qualities and rows to cycles. First column is the cycle number.
41 FFQ 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 0 20 38 32 1 0 0 0 0 0 0 48 FFQ 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 0 20 38 32 1 0 0 0 0 0 0
42 FFQ 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 18 36 36 6 0 0 0 0 0 0 49 FFQ 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 18 36 36 6 0 0 0 0 0 0
43 FFQ 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 14 31 46 5 0 0 0 0 0 0 50 FFQ 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 14 31 46 5 0 0 0 0 0 0
44 FFQ 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 8 36 42 11 0 0 0 0 0 0 51 FFQ 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 8 36 42 11 0 0 0 0 0 0
287 FFQ 247 0 0 0 0 0 0 0 0 0 0 0 0 8 3 16 14 0 0 0 0 0 0 0 0 10 4 6 0 0 0 0 0 2 15 1 2 2 17 0 0 0 0 294 FFQ 247 0 0 0 0 0 0 0 0 0 0 0 0 8 3 16 14 0 0 0 0 0 0 0 0 10 4 6 0 0 0 0 0 2 15 1 2 2 17 0 0 0 0
288 FFQ 248 0 0 0 0 0 0 0 0 0 0 0 0 5 6 21 8 0 0 0 0 0 0 0 0 7 8 6 2 0 0 0 1 1 14 0 2 2 17 0 0 0 0 295 FFQ 248 0 0 0 0 0 0 0 0 0 0 0 0 5 6 21 8 0 0 0 0 0 0 0 0 7 8 6 2 0 0 0 1 1 14 0 2 2 17 0 0 0 0
289 FFQ 249 0 0 0 0 0 0 0 0 0 0 0 0 5 6 20 8 0 0 0 0 0 0 0 0 5 7 10 0 1 0 0 0 1 15 0 2 0 20 0 0 0 0 296 FFQ 249 0 0 0 0 0 0 0 0 0 0 0 0 5 6 20 8 0 0 0 0 0 0 0 0 5 7 10 0 1 0 0 0 1 15 0 2 0 20 0 0 0 0
290 FFQ 250 0 0 0 0 0 0 0 0 0 0 0 0 2 10 15 10 0 0 0 0 0 0 0 0 9 5 8 1 0 0 0 2 6 10 0 0 2 20 0 0 0 0 297 FFQ 250 0 0 0 0 0 0 0 0 0 0 0 0 2 10 15 10 0 0 0 0 0 0 0 0 9 5 8 1 0 0 0 2 6 10 0 0 2 20 0 0 0 0
291 FFQ 251 0 0 0 0 0 0 0 0 0 0 0 0 7 20 21 17 0 0 0 0 0 0 0 0 7 7 6 0 0 0 0 1 2 4 0 0 0 8 0 0 0 0 298 FFQ 251 0 0 0 0 0 0 0 0 0 0 0 0 7 20 21 17 0 0 0 0 0 0 0 0 7 7 6 0 0 0 0 1 2 4 0 0 0 8 0 0 0 0
292 FFQ 252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299 # Last Fragment Qualities. Use `grep ^LFQ | cut -f 2-` to extract this part.
293 # Last Fragment Qualitites. Use `grep ^LFQ | cut -f 2-` to extract this part.
294 # Columns correspond to qualities and rows to cycles. First column is the cycle number. 300 # Columns correspond to qualities and rows to cycles. First column is the cycle number.
295 LFQ 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 0 20 38 32 1 0 0 0 0 0 0 301 LFQ 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 0 20 38 32 1 0 0 0 0 0 0
296 LFQ 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 18 36 36 6 0 0 0 0 0 0 302 LFQ 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 18 36 36 6 0 0 0 0 0 0
297 LFQ 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 14 31 46 5 0 0 0 0 0 0 303 LFQ 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 14 31 46 5 0 0 0 0 0 0
298 LFQ 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 8 36 42 11 0 0 0 0 0 0 304 LFQ 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 8 36 42 11 0 0 0 0 0 0
541 LFQ 247 0 0 0 0 0 0 0 0 0 0 0 0 8 3 16 14 0 0 0 0 0 0 0 0 10 4 6 0 0 0 0 0 2 15 1 2 2 17 0 0 0 0 547 LFQ 247 0 0 0 0 0 0 0 0 0 0 0 0 8 3 16 14 0 0 0 0 0 0 0 0 10 4 6 0 0 0 0 0 2 15 1 2 2 17 0 0 0 0
542 LFQ 248 0 0 0 0 0 0 0 0 0 0 0 0 5 6 21 8 0 0 0 0 0 0 0 0 7 8 6 2 0 0 0 1 1 14 0 2 2 17 0 0 0 0 548 LFQ 248 0 0 0 0 0 0 0 0 0 0 0 0 5 6 21 8 0 0 0 0 0 0 0 0 7 8 6 2 0 0 0 1 1 14 0 2 2 17 0 0 0 0
543 LFQ 249 0 0 0 0 0 0 0 0 0 0 0 0 5 6 20 8 0 0 0 0 0 0 0 0 5 7 10 0 1 0 0 0 1 15 0 2 0 20 0 0 0 0 549 LFQ 249 0 0 0 0 0 0 0 0 0 0 0 0 5 6 20 8 0 0 0 0 0 0 0 0 5 7 10 0 1 0 0 0 1 15 0 2 0 20 0 0 0 0
544 LFQ 250 0 0 0 0 0 0 0 0 0 0 0 0 2 10 15 10 0 0 0 0 0 0 0 0 9 5 8 1 0 0 0 2 6 10 0 0 2 20 0 0 0 0 550 LFQ 250 0 0 0 0 0 0 0 0 0 0 0 0 2 10 15 10 0 0 0 0 0 0 0 0 9 5 8 1 0 0 0 2 6 10 0 0 2 20 0 0 0 0
545 LFQ 251 0 0 0 0 0 0 0 0 0 0 0 0 7 20 21 17 0 0 0 0 0 0 0 0 7 7 6 0 0 0 0 1 2 4 0 0 0 8 0 0 0 0 551 LFQ 251 0 0 0 0 0 0 0 0 0 0 0 0 7 20 21 17 0 0 0 0 0 0 0 0 7 7 6 0 0 0 0 1 2 4 0 0 0 8 0 0 0 0
546 LFQ 252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
547 # Mismatches per cycle and quality. Use `grep ^MPC | cut -f 2-` to extract this part. 552 # Mismatches per cycle and quality. Use `grep ^MPC | cut -f 2-` to extract this part.
548 # Columns correspond to qualities, rows to cycles. First column is the cycle number, second 553 # Columns correspond to qualities, rows to cycles. First column is the cycle number, second
549 # is the number of N's and the rest is the number of mismatches 554 # is the number of N's and the rest is the number of mismatches
550 MPC 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 555 MPC 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0
551 MPC 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 556 MPC 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0
1087 GCC 247 32.00 14.00 13.00 41.00 0.00 0.00 1092 GCC 247 32.00 14.00 13.00 41.00 0.00 0.00
1088 GCC 248 18.00 18.00 25.00 39.00 0.00 0.00 1093 GCC 248 18.00 18.00 25.00 39.00 0.00 0.00
1089 GCC 249 25.00 23.00 21.00 31.00 0.00 0.00 1094 GCC 249 25.00 23.00 21.00 31.00 0.00 0.00
1090 GCC 250 27.50 22.50 17.50 32.50 0.00 0.00 1095 GCC 250 27.50 22.50 17.50 32.50 0.00 0.00
1091 GCC 251 13.50 20.50 36.50 29.50 0.00 0.00 1096 GCC 251 13.50 20.50 36.50 29.50 0.00 0.00
1097 # ACGT content per cycle for first fragments. Use `grep ^FBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
1098 FBC 1 21.43 27.55 36.73 14.29 2.04 0.00
1099 FBC 2 34.00 15.00 12.00 39.00 0.00 0.00
1100 FBC 3 32.00 25.00 9.00 34.00 0.00 0.00
1101 FBC 4 21.00 26.00 16.00 37.00 0.00 0.00
1102 FBC 5 37.00 20.00 14.00 29.00 0.00 0.00
1103 FBC 6 28.00 26.00 17.00 29.00 0.00 0.00
1104 FBC 7 31.00 14.00 31.00 24.00 0.00 0.00
1105 FBC 8 52.00 13.00 21.00 14.00 0.00 0.00
1106 FBC 9 15.00 31.00 20.00 34.00 0.00 0.00
1107 FBC 10 39.00 15.00 20.00 26.00 0.00 0.00
1108 FBC 11 23.00 14.00 30.00 33.00 0.00 0.00
1109 FBC 12 32.00 24.00 22.00 22.00 0.00 0.00
1110 FBC 13 25.00 13.00 23.00 39.00 0.00 0.00
1111 FBC 14 27.27 20.20 28.28 24.24 1.01 0.00
1112 FBC 15 28.00 21.00 24.00 27.00 0.00 0.00
1113 FBC 16 27.00 15.00 20.00 38.00 0.00 0.00
1114 FBC 17 27.00 24.00 15.00 34.00 0.00 0.00
1115 FBC 18 30.00 27.00 21.00 22.00 0.00 0.00
1116 FBC 19 28.00 26.00 21.00 25.00 0.00 0.00
1117 FBC 20 22.00 26.00 15.00 37.00 0.00 0.00
1118 FBC 21 35.00 17.00 20.00 28.00 0.00 0.00
1119 FBC 22 36.00 26.00 18.00 20.00 0.00 0.00
1120 FBC 23 32.32 17.17 15.15 35.35 1.01 0.00
1121 FBC 24 38.00 10.00 24.00 28.00 0.00 0.00
1122 FBC 25 33.00 22.00 18.00 27.00 0.00 0.00
1123 FBC 26 31.00 16.00 18.00 35.00 0.00 0.00
1124 FBC 27 37.00 11.00 29.00 23.00 0.00 0.00
1125 FBC 28 32.00 15.00 23.00 30.00 0.00 0.00
1126 FBC 29 30.00 26.00 25.00 19.00 0.00 0.00
1127 FBC 30 28.00 19.00 15.00 38.00 0.00 0.00
1128 FBC 31 34.00 30.00 13.00 23.00 0.00 0.00
1129 FBC 32 47.00 21.00 19.00 13.00 0.00 0.00
1130 FBC 33 24.00 24.00 14.00 38.00 0.00 0.00
1131 FBC 34 36.00 16.00 21.00 27.00 0.00 0.00
1132 FBC 35 30.00 24.00 21.00 25.00 0.00 0.00
1133 FBC 36 43.00 25.00 16.00 16.00 0.00 0.00
1134 FBC 37 38.00 16.00 20.00 26.00 0.00 0.00
1135 FBC 38 25.00 26.00 25.00 24.00 0.00 0.00
1136 FBC 39 23.00 42.00 18.00 17.00 0.00 0.00
1137 FBC 40 35.00 18.00 19.00 28.00 0.00 0.00
1138 FBC 41 37.00 29.00 18.00 16.00 0.00 0.00
1139 FBC 42 32.00 24.00 21.00 23.00 0.00 0.00
1140 FBC 43 32.00 30.00 14.00 24.00 0.00 0.00
1141 FBC 44 19.00 28.00 21.00 32.00 0.00 0.00
1142 FBC 45 43.00 18.00 25.00 14.00 0.00 0.00
1143 FBC 46 26.00 20.00 23.00 31.00 0.00 0.00
1144 FBC 47 37.00 31.00 15.00 17.00 0.00 0.00
1145 FBC 48 30.00 27.00 15.00 28.00 0.00 0.00
1146 FBC 49 31.00 32.00 11.00 26.00 0.00 0.00
1147 FBC 50 44.00 21.00 9.00 26.00 0.00 0.00
1148 FBC 51 40.00 28.00 14.00 18.00 0.00 0.00
1149 FBC 52 40.00 25.00 19.00 16.00 0.00 0.00
1150 FBC 53 21.00 29.00 25.00 25.00 0.00 0.00
1151 FBC 54 38.00 19.00 24.00 19.00 0.00 0.00
1152 FBC 55 29.00 23.00 16.00 32.00 0.00 0.00
1153 FBC 56 31.00 25.00 11.00 33.00 0.00 0.00
1154 FBC 57 18.00 24.00 23.00 35.00 0.00 0.00
1155 FBC 58 27.00 35.00 21.00 17.00 0.00 0.00
1156 FBC 59 35.00 25.00 22.00 18.00 0.00 0.00
1157 FBC 60 28.00 30.00 15.00 27.00 0.00 0.00
1158 FBC 61 28.00 24.00 24.00 24.00 0.00 0.00
1159 FBC 62 28.00 26.00 13.00 33.00 0.00 0.00
1160 FBC 63 29.00 32.00 22.00 17.00 0.00 0.00
1161 FBC 64 37.00 23.00 24.00 16.00 0.00 0.00
1162 FBC 65 33.00 22.00 16.00 29.00 0.00 0.00
1163 FBC 66 35.00 24.00 16.00 25.00 0.00 0.00
1164 FBC 67 39.00 25.00 17.00 19.00 0.00 0.00
1165 FBC 68 34.00 31.00 12.00 23.00 0.00 0.00
1166 FBC 69 39.00 21.00 19.00 21.00 0.00 0.00
1167 FBC 70 37.00 20.00 15.00 28.00 0.00 0.00
1168 FBC 71 22.00 36.00 24.00 18.00 0.00 0.00
1169 FBC 72 25.00 32.00 22.00 21.00 0.00 0.00
1170 FBC 73 34.00 23.00 19.00 24.00 0.00 0.00
1171 FBC 74 26.00 33.00 12.00 29.00 0.00 0.00
1172 FBC 75 37.00 15.00 16.00 32.00 0.00 0.00
1173 FBC 76 26.00 31.00 22.00 21.00 0.00 0.00
1174 FBC 77 37.00 22.00 17.00 24.00 0.00 0.00
1175 FBC 78 25.00 38.00 18.00 19.00 0.00 0.00
1176 FBC 79 19.00 28.00 24.00 29.00 0.00 0.00
1177 FBC 80 28.00 20.00 27.00 25.00 0.00 0.00
1178 FBC 81 16.00 26.00 26.00 32.00 0.00 0.00
1179 FBC 82 32.00 35.00 18.00 15.00 0.00 0.00
1180 FBC 83 27.00 28.00 11.00 34.00 0.00 0.00
1181 FBC 84 16.00 43.00 19.00 22.00 0.00 0.00
1182 FBC 85 33.00 29.00 12.00 26.00 0.00 0.00
1183 FBC 86 18.00 49.00 14.00 19.00 0.00 0.00
1184 FBC 87 37.00 17.00 17.00 29.00 0.00 0.00
1185 FBC 88 21.00 31.00 24.00 24.00 0.00 0.00
1186 FBC 89 27.00 30.00 24.00 19.00 0.00 0.00
1187 FBC 90 13.00 25.00 23.00 39.00 0.00 0.00
1188 FBC 91 25.00 34.00 20.00 21.00 0.00 0.00
1189 FBC 92 25.00 22.00 23.00 30.00 0.00 0.00
1190 FBC 93 22.00 35.00 18.00 25.00 0.00 0.00
1191 FBC 94 24.00 18.00 23.00 35.00 0.00 0.00
1192 FBC 95 22.22 40.40 12.12 25.25 1.01 0.00
1193 FBC 96 25.00 24.00 18.00 33.00 0.00 0.00
1194 FBC 97 26.00 35.00 17.00 22.00 0.00 0.00
1195 FBC 98 15.15 35.35 20.20 29.29 1.01 0.00
1196 FBC 99 22.00 30.00 28.00 20.00 0.00 0.00
1197 FBC 100 20.00 18.00 23.00 39.00 0.00 0.00
1198 FBC 101 23.00 46.00 13.00 18.00 0.00 0.00
1199 FBC 102 15.00 21.00 29.00 35.00 0.00 0.00
1200 FBC 103 30.00 26.00 16.00 28.00 0.00 0.00
1201 FBC 104 23.00 31.00 19.00 27.00 0.00 0.00
1202 FBC 105 33.00 31.00 23.00 13.00 0.00 0.00
1203 FBC 106 24.00 30.00 27.00 19.00 0.00 0.00
1204 FBC 107 16.16 38.38 21.21 24.24 1.01 0.00
1205 FBC 108 22.22 28.28 26.26 23.23 1.01 0.00
1206 FBC 109 15.00 33.00 20.00 32.00 0.00 0.00
1207 FBC 110 12.12 39.39 20.20 28.28 1.01 0.00
1208 FBC 111 23.23 31.31 24.24 21.21 1.01 0.00
1209 FBC 112 35.35 28.28 16.16 20.20 1.01 0.00
1210 FBC 113 18.18 21.21 34.34 26.26 1.01 0.00
1211 FBC 114 15.00 31.00 35.00 19.00 0.00 0.00
1212 FBC 115 27.00 26.00 22.00 25.00 0.00 0.00
1213 FBC 116 24.00 31.00 33.00 12.00 0.00 0.00
1214 FBC 117 23.00 25.00 17.00 35.00 0.00 0.00
1215 FBC 118 26.00 15.00 34.00 25.00 0.00 0.00
1216 FBC 119 24.00 38.00 17.00 21.00 0.00 0.00
1217 FBC 120 16.00 25.00 26.00 33.00 0.00 0.00
1218 FBC 121 31.31 31.31 25.25 12.12 1.01 0.00
1219 FBC 122 16.00 21.00 27.00 36.00 0.00 0.00
1220 FBC 123 22.00 45.00 13.00 20.00 0.00 0.00
1221 FBC 124 8.00 33.00 33.00 26.00 0.00 0.00
1222 FBC 125 21.00 30.00 16.00 33.00 0.00 0.00
1223 FBC 126 28.00 15.00 30.00 27.00 0.00 0.00
1224 FBC 127 27.00 17.00 21.00 35.00 0.00 0.00
1225 FBC 128 20.00 33.00 32.00 15.00 0.00 0.00
1226 FBC 129 27.00 24.00 29.00 20.00 0.00 0.00
1227 FBC 130 25.00 21.00 21.00 33.00 0.00 0.00
1228 FBC 131 18.00 39.00 25.00 18.00 0.00 0.00
1229 FBC 132 22.00 29.00 22.00 27.00 0.00 0.00
1230 FBC 133 12.00 29.00 38.00 21.00 0.00 0.00
1231 FBC 134 27.00 20.00 30.00 23.00 0.00 0.00
1232 FBC 135 16.00 19.00 35.00 30.00 0.00 0.00
1233 FBC 136 31.00 31.00 16.00 22.00 0.00 0.00
1234 FBC 137 24.00 21.00 31.00 24.00 0.00 0.00
1235 FBC 138 14.00 39.00 20.00 27.00 0.00 0.00
1236 FBC 139 22.00 27.00 27.00 24.00 0.00 0.00
1237 FBC 140 15.00 22.00 31.00 32.00 0.00 0.00
1238 FBC 141 20.00 23.00 26.00 31.00 0.00 0.00
1239 FBC 142 19.00 26.00 41.00 14.00 0.00 0.00
1240 FBC 143 21.00 25.00 26.00 28.00 0.00 0.00
1241 FBC 144 23.00 28.00 29.00 20.00 0.00 0.00
1242 FBC 145 24.00 16.00 34.00 26.00 0.00 0.00
1243 FBC 146 24.00 17.00 38.00 21.00 0.00 0.00
1244 FBC 147 30.00 22.00 31.00 17.00 0.00 0.00
1245 FBC 148 13.00 25.00 40.00 22.00 0.00 0.00
1246 FBC 149 26.00 23.00 24.00 27.00 0.00 0.00
1247 FBC 150 16.00 26.00 27.00 31.00 0.00 0.00
1248 FBC 151 17.00 32.00 31.00 20.00 0.00 0.00
1249 FBC 152 21.00 14.00 33.00 32.00 0.00 0.00
1250 FBC 153 21.00 25.00 29.00 25.00 0.00 0.00
1251 FBC 154 19.00 20.00 30.00 31.00 0.00 0.00
1252 FBC 155 21.00 24.00 21.00 34.00 0.00 0.00
1253 FBC 156 13.00 24.00 35.00 28.00 0.00 0.00
1254 FBC 157 21.00 28.00 26.00 25.00 0.00 0.00
1255 FBC 158 24.00 26.00 28.00 22.00 0.00 0.00
1256 FBC 159 16.00 10.00 49.00 25.00 0.00 0.00
1257 FBC 160 25.00 22.00 31.00 22.00 0.00 0.00
1258 FBC 161 13.00 18.00 50.00 19.00 0.00 0.00
1259 FBC 162 30.00 14.00 25.00 31.00 0.00 0.00
1260 FBC 163 16.00 17.00 40.00 27.00 0.00 0.00
1261 FBC 164 25.00 17.00 22.00 36.00 0.00 0.00
1262 FBC 165 16.00 19.00 34.00 31.00 0.00 0.00
1263 FBC 166 15.00 39.00 27.00 19.00 0.00 0.00
1264 FBC 167 16.00 15.00 38.00 31.00 0.00 0.00
1265 FBC 168 12.00 26.00 29.00 33.00 0.00 0.00
1266 FBC 169 16.00 18.00 26.00 40.00 0.00 0.00
1267 FBC 170 16.00 22.00 29.00 33.00 0.00 0.00
1268 FBC 171 17.00 26.00 35.00 22.00 0.00 0.00
1269 FBC 172 14.00 18.00 34.00 34.00 0.00 0.00
1270 FBC 173 25.00 16.00 34.00 25.00 0.00 0.00
1271 FBC 174 14.00 23.00 34.00 29.00 0.00 0.00
1272 FBC 175 33.00 16.00 37.00 14.00 0.00 0.00
1273 FBC 176 16.00 28.00 33.00 23.00 0.00 0.00
1274 FBC 177 14.00 20.00 29.00 37.00 0.00 0.00
1275 FBC 178 13.00 26.00 30.00 31.00 0.00 0.00
1276 FBC 179 12.00 16.00 24.00 48.00 0.00 0.00
1277 FBC 180 20.00 19.00 37.00 24.00 0.00 0.00
1278 FBC 181 20.00 22.00 33.00 25.00 0.00 0.00
1279 FBC 182 30.00 16.00 25.00 29.00 0.00 0.00
1280 FBC 183 21.00 12.00 30.00 37.00 0.00 0.00
1281 FBC 184 13.00 28.00 31.00 28.00 0.00 0.00
1282 FBC 185 14.00 32.00 33.00 21.00 0.00 0.00
1283 FBC 186 24.00 25.00 33.00 18.00 0.00 0.00
1284 FBC 187 14.00 15.00 39.00 32.00 0.00 0.00
1285 FBC 188 26.00 24.00 25.00 25.00 0.00 0.00
1286 FBC 189 15.00 21.00 35.00 29.00 0.00 0.00
1287 FBC 190 22.00 32.00 21.00 25.00 0.00 0.00
1288 FBC 191 22.00 23.00 27.00 28.00 0.00 0.00
1289 FBC 192 32.00 24.00 14.00 30.00 0.00 0.00
1290 FBC 193 19.00 25.00 26.00 30.00 0.00 0.00
1291 FBC 194 16.00 33.00 25.00 26.00 0.00 0.00
1292 FBC 195 16.00 24.00 25.00 35.00 0.00 0.00
1293 FBC 196 20.00 28.00 22.00 30.00 0.00 0.00
1294 FBC 197 22.00 22.00 22.00 34.00 0.00 0.00
1295 FBC 198 19.00 23.00 35.00 23.00 0.00 0.00
1296 FBC 199 18.00 20.00 24.00 38.00 0.00 0.00
1297 FBC 200 17.00 31.00 19.00 33.00 0.00 0.00
1298 FBC 201 28.00 23.00 21.00 28.00 0.00 0.00
1299 FBC 202 20.00 26.00 18.00 36.00 0.00 0.00
1300 FBC 203 22.00 30.00 21.00 27.00 0.00 0.00
1301 FBC 204 28.00 29.00 24.00 19.00 0.00 0.00
1302 FBC 205 23.00 20.00 24.00 33.00 0.00 0.00
1303 FBC 206 25.00 24.00 22.00 29.00 0.00 0.00
1304 FBC 207 23.00 21.00 20.00 36.00 0.00 0.00
1305 FBC 208 16.00 38.00 26.00 20.00 0.00 0.00
1306 FBC 209 14.00 26.00 9.00 51.00 0.00 0.00
1307 FBC 210 19.00 24.00 36.00 21.00 0.00 0.00
1308 FBC 211 24.00 26.00 16.00 34.00 0.00 0.00
1309 FBC 212 19.00 35.00 14.00 32.00 0.00 0.00
1310 FBC 213 26.00 18.00 28.00 28.00 0.00 0.00
1311 FBC 214 19.00 25.00 25.00 31.00 0.00 0.00
1312 FBC 215 24.00 26.00 21.00 29.00 0.00 0.00
1313 FBC 216 25.00 18.00 25.00 32.00 0.00 0.00
1314 FBC 217 25.00 28.00 18.00 29.00 0.00 0.00
1315 FBC 218 22.00 30.00 18.00 30.00 0.00 0.00
1316 FBC 219 15.00 24.00 18.00 43.00 0.00 0.00
1317 FBC 220 23.00 24.00 23.00 30.00 0.00 0.00
1318 FBC 221 23.00 23.00 21.00 33.00 0.00 0.00
1319 FBC 222 21.00 22.00 18.00 39.00 0.00 0.00
1320 FBC 223 21.00 32.00 23.00 24.00 0.00 0.00
1321 FBC 224 26.00 25.00 22.00 27.00 0.00 0.00
1322 FBC 225 15.00 39.00 27.00 19.00 0.00 0.00
1323 FBC 226 20.00 26.00 23.00 31.00 0.00 0.00
1324 FBC 227 24.00 27.00 21.00 28.00 0.00 0.00
1325 FBC 228 32.00 18.00 27.00 23.00 0.00 0.00
1326 FBC 229 23.00 22.00 21.00 34.00 0.00 0.00
1327 FBC 230 19.00 31.00 17.00 33.00 0.00 0.00
1328 FBC 231 26.00 29.00 29.00 16.00 0.00 0.00
1329 FBC 232 22.00 20.00 14.00 44.00 0.00 0.00
1330 FBC 233 20.00 29.00 23.00 28.00 0.00 0.00
1331 FBC 234 19.00 28.00 22.00 31.00 0.00 0.00
1332 FBC 235 23.00 19.00 24.00 34.00 0.00 0.00
1333 FBC 236 27.00 26.00 18.00 29.00 0.00 0.00
1334 FBC 237 25.00 20.00 22.00 33.00 0.00 0.00
1335 FBC 238 21.00 34.00 20.00 25.00 0.00 0.00
1336 FBC 239 22.00 8.00 17.00 53.00 0.00 0.00
1337 FBC 240 29.00 22.00 18.00 31.00 0.00 0.00
1338 FBC 241 24.00 23.00 16.00 37.00 0.00 0.00
1339 FBC 242 32.00 22.00 16.00 30.00 0.00 0.00
1340 FBC 243 20.00 16.00 23.00 41.00 0.00 0.00
1341 FBC 244 26.00 23.00 17.00 34.00 0.00 0.00
1342 FBC 245 32.00 23.00 19.00 26.00 0.00 0.00
1343 FBC 246 24.00 33.00 21.00 22.00 0.00 0.00
1344 FBC 247 34.00 15.00 12.00 39.00 0.00 0.00
1345 FBC 248 14.00 19.00 24.00 43.00 0.00 0.00
1346 FBC 249 25.00 24.00 20.00 31.00 0.00 0.00
1347 FBC 250 30.00 25.00 15.00 30.00 0.00 0.00
1348 FBC 251 14.00 24.00 33.00 29.00 0.00 0.00
1349 # ACGT content per cycle for last fragments. Use `grep ^LBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
1350 LBC 1 22.45 32.65 31.63 13.27 2.04 0.00
1351 LBC 2 26.00 17.00 10.00 47.00 0.00 0.00
1352 LBC 3 34.00 25.00 9.00 32.00 0.00 0.00
1353 LBC 4 13.00 32.00 10.00 45.00 0.00 0.00
1354 LBC 5 37.00 24.00 10.00 29.00 0.00 0.00
1355 LBC 6 44.00 26.00 17.00 13.00 0.00 0.00
1356 LBC 7 28.00 13.00 32.00 27.00 0.00 0.00
1357 LBC 8 49.00 16.00 18.00 17.00 0.00 0.00
1358 LBC 9 19.00 35.00 16.00 30.00 0.00 0.00
1359 LBC 10 35.00 13.00 22.00 30.00 0.00 0.00
1360 LBC 11 18.00 15.00 29.00 38.00 0.00 0.00
1361 LBC 12 28.00 24.00 22.00 26.00 0.00 0.00
1362 LBC 13 29.00 17.00 19.00 35.00 0.00 0.00
1363 LBC 14 21.21 24.24 24.24 30.30 1.01 0.00
1364 LBC 15 23.00 20.00 25.00 32.00 0.00 0.00
1365 LBC 16 35.00 15.00 20.00 30.00 0.00 0.00
1366 LBC 17 29.00 26.00 13.00 32.00 0.00 0.00
1367 LBC 18 31.00 30.00 18.00 21.00 0.00 0.00
1368 LBC 19 30.00 26.00 21.00 23.00 0.00 0.00
1369 LBC 20 23.00 21.00 20.00 36.00 0.00 0.00
1370 LBC 21 36.00 18.00 19.00 27.00 0.00 0.00
1371 LBC 22 39.00 31.00 13.00 17.00 0.00 0.00
1372 LBC 23 30.30 21.21 11.11 37.37 1.01 0.00
1373 LBC 24 36.00 14.00 20.00 30.00 0.00 0.00
1374 LBC 25 38.00 23.00 17.00 22.00 0.00 0.00
1375 LBC 26 36.00 21.00 13.00 30.00 0.00 0.00
1376 LBC 27 32.00 18.00 22.00 28.00 0.00 0.00
1377 LBC 28 30.00 13.00 25.00 32.00 0.00 0.00
1378 LBC 29 30.00 28.00 23.00 19.00 0.00 0.00
1379 LBC 30 34.00 21.00 13.00 32.00 0.00 0.00
1380 LBC 31 33.00 29.00 14.00 24.00 0.00 0.00
1381 LBC 32 38.00 20.00 20.00 22.00 0.00 0.00
1382 LBC 33 27.00 23.00 15.00 35.00 0.00 0.00
1383 LBC 34 43.00 17.00 20.00 20.00 0.00 0.00
1384 LBC 35 35.00 23.00 22.00 20.00 0.00 0.00
1385 LBC 36 41.00 25.00 16.00 18.00 0.00 0.00
1386 LBC 37 38.00 18.00 18.00 26.00 0.00 0.00
1387 LBC 38 23.00 26.00 25.00 26.00 0.00 0.00
1388 LBC 39 22.00 41.00 19.00 18.00 0.00 0.00
1389 LBC 40 29.00 14.00 23.00 34.00 0.00 0.00
1390 LBC 41 29.00 27.00 20.00 24.00 0.00 0.00
1391 LBC 42 29.00 27.00 18.00 26.00 0.00 0.00
1392 LBC 43 38.00 28.00 16.00 18.00 0.00 0.00
1393 LBC 44 21.00 26.00 23.00 30.00 0.00 0.00
1394 LBC 45 38.00 25.00 18.00 19.00 0.00 0.00
1395 LBC 46 27.00 21.00 22.00 30.00 0.00 0.00
1396 LBC 47 40.00 28.00 18.00 14.00 0.00 0.00
1397 LBC 48 25.00 22.00 20.00 33.00 0.00 0.00
1398 LBC 49 26.00 33.00 10.00 31.00 0.00 0.00
1399 LBC 50 49.00 20.00 10.00 21.00 0.00 0.00
1400 LBC 51 29.00 29.00 13.00 29.00 0.00 0.00
1401 LBC 52 43.00 22.00 22.00 13.00 0.00 0.00
1402 LBC 53 19.00 27.00 27.00 27.00 0.00 0.00
1403 LBC 54 25.00 18.00 25.00 32.00 0.00 0.00
1404 LBC 55 32.00 22.00 17.00 29.00 0.00 0.00
1405 LBC 56 36.00 20.00 16.00 28.00 0.00 0.00
1406 LBC 57 28.00 24.00 23.00 25.00 0.00 0.00
1407 LBC 58 23.00 39.00 17.00 21.00 0.00 0.00
1408 LBC 59 33.00 21.00 26.00 20.00 0.00 0.00
1409 LBC 60 30.00 26.00 19.00 25.00 0.00 0.00
1410 LBC 61 23.00 23.00 25.00 29.00 0.00 0.00
1411 LBC 62 35.00 19.00 20.00 26.00 0.00 0.00
1412 LBC 63 26.00 25.00 29.00 20.00 0.00 0.00
1413 LBC 64 30.00 20.00 27.00 23.00 0.00 0.00
1414 LBC 65 38.00 17.00 21.00 24.00 0.00 0.00
1415 LBC 66 33.00 26.00 14.00 27.00 0.00 0.00
1416 LBC 67 35.00 21.00 21.00 23.00 0.00 0.00
1417 LBC 68 39.00 28.00 15.00 18.00 0.00 0.00
1418 LBC 69 38.00 18.00 22.00 22.00 0.00 0.00
1419 LBC 70 40.00 13.00 22.00 25.00 0.00 0.00
1420 LBC 71 29.00 41.00 19.00 11.00 0.00 0.00
1421 LBC 72 33.00 26.00 28.00 13.00 0.00 0.00
1422 LBC 73 31.00 18.00 24.00 27.00 0.00 0.00
1423 LBC 74 31.00 32.00 13.00 24.00 0.00 0.00
1424 LBC 75 46.00 10.00 21.00 23.00 0.00 0.00
1425 LBC 76 23.00 28.00 25.00 24.00 0.00 0.00
1426 LBC 77 35.00 20.00 19.00 26.00 0.00 0.00
1427 LBC 78 29.00 30.00 26.00 15.00 0.00 0.00
1428 LBC 79 24.00 25.00 27.00 24.00 0.00 0.00
1429 LBC 80 40.00 18.00 29.00 13.00 0.00 0.00
1430 LBC 81 18.00 26.00 26.00 30.00 0.00 0.00
1431 LBC 82 30.00 25.00 28.00 17.00 0.00 0.00
1432 LBC 83 36.00 25.00 14.00 25.00 0.00 0.00
1433 LBC 84 22.00 39.00 23.00 16.00 0.00 0.00
1434 LBC 85 42.00 20.00 21.00 17.00 0.00 0.00
1435 LBC 86 12.00 47.00 16.00 25.00 0.00 0.00
1436 LBC 87 45.00 15.00 19.00 21.00 0.00 0.00
1437 LBC 88 26.00 24.00 31.00 19.00 0.00 0.00
1438 LBC 89 26.00 25.00 29.00 20.00 0.00 0.00
1439 LBC 90 24.00 22.00 26.00 28.00 0.00 0.00
1440 LBC 91 29.00 30.00 24.00 17.00 0.00 0.00
1441 LBC 92 22.00 13.00 32.00 33.00 0.00 0.00
1442 LBC 93 29.00 40.00 13.00 18.00 0.00 0.00
1443 LBC 94 30.00 16.00 25.00 29.00 0.00 0.00
1444 LBC 95 31.31 35.35 17.17 16.16 1.01 0.00
1445 LBC 96 34.00 27.00 15.00 24.00 0.00 0.00
1446 LBC 97 32.00 27.00 25.00 16.00 0.00 0.00
1447 LBC 98 21.21 31.31 24.24 23.23 1.01 0.00
1448 LBC 99 27.00 37.00 21.00 15.00 0.00 0.00
1449 LBC 100 29.00 15.00 26.00 30.00 0.00 0.00
1450 LBC 101 27.00 34.00 25.00 14.00 0.00 0.00
1451 LBC 102 20.00 14.00 36.00 30.00 0.00 0.00
1452 LBC 103 32.00 26.00 16.00 26.00 0.00 0.00
1453 LBC 104 30.00 28.00 22.00 20.00 0.00 0.00
1454 LBC 105 35.00 35.00 19.00 11.00 0.00 0.00
1455 LBC 106 22.00 32.00 25.00 21.00 0.00 0.00
1456 LBC 107 19.19 33.33 26.26 21.21 1.01 0.00
1457 LBC 108 27.27 33.33 21.21 18.18 1.01 0.00
1458 LBC 109 19.00 29.00 24.00 28.00 0.00 0.00
1459 LBC 110 20.20 31.31 28.28 20.20 1.01 0.00
1460 LBC 111 25.25 33.33 22.22 19.19 1.01 0.00
1461 LBC 112 39.39 28.28 16.16 16.16 1.01 0.00
1462 LBC 113 21.21 24.24 31.31 23.23 1.01 0.00
1463 LBC 114 19.00 31.00 35.00 15.00 0.00 0.00
1464 LBC 115 32.00 23.00 25.00 20.00 0.00 0.00
1465 LBC 116 20.00 29.00 35.00 16.00 0.00 0.00
1466 LBC 117 31.00 21.00 21.00 27.00 0.00 0.00
1467 LBC 118 25.00 14.00 35.00 26.00 0.00 0.00
1468 LBC 119 21.00 31.00 24.00 24.00 0.00 0.00
1469 LBC 120 19.00 24.00 27.00 30.00 0.00 0.00
1470 LBC 121 24.24 36.36 20.20 19.19 1.01 0.00
1471 LBC 122 18.00 25.00 23.00 34.00 0.00 0.00
1472 LBC 123 25.00 48.00 10.00 17.00 0.00 0.00
1473 LBC 124 10.00 31.00 35.00 24.00 0.00 0.00
1474 LBC 125 27.00 24.00 22.00 27.00 0.00 0.00
1475 LBC 126 24.00 19.00 26.00 31.00 0.00 0.00
1476 LBC 127 26.00 16.00 22.00 36.00 0.00 0.00
1477 LBC 128 16.00 35.00 30.00 19.00 0.00 0.00
1478 LBC 129 24.00 27.00 26.00 23.00 0.00 0.00
1479 LBC 130 25.00 19.00 23.00 33.00 0.00 0.00
1480 LBC 131 17.00 40.00 24.00 19.00 0.00 0.00
1481 LBC 132 20.00 27.00 24.00 29.00 0.00 0.00
1482 LBC 133 15.00 34.00 33.00 18.00 0.00 0.00
1483 LBC 134 22.00 19.00 31.00 28.00 0.00 0.00
1484 LBC 135 17.00 28.00 26.00 29.00 0.00 0.00
1485 LBC 136 25.00 33.00 14.00 28.00 0.00 0.00
1486 LBC 137 21.00 22.00 30.00 27.00 0.00 0.00
1487 LBC 138 15.00 30.00 29.00 26.00 0.00 0.00
1488 LBC 139 19.00 32.00 22.00 27.00 0.00 0.00
1489 LBC 140 19.00 24.00 29.00 28.00 0.00 0.00
1490 LBC 141 21.00 24.00 25.00 30.00 0.00 0.00
1491 LBC 142 17.00 32.00 35.00 16.00 0.00 0.00
1492 LBC 143 23.00 23.00 28.00 26.00 0.00 0.00
1493 LBC 144 20.00 33.00 24.00 23.00 0.00 0.00
1494 LBC 145 20.00 26.00 24.00 30.00 0.00 0.00
1495 LBC 146 26.00 15.00 40.00 19.00 0.00 0.00
1496 LBC 147 23.00 23.00 30.00 24.00 0.00 0.00
1497 LBC 148 12.00 32.00 33.00 23.00 0.00 0.00
1498 LBC 149 27.00 24.00 23.00 26.00 0.00 0.00
1499 LBC 150 12.00 32.00 21.00 35.00 0.00 0.00
1500 LBC 151 22.00 29.00 34.00 15.00 0.00 0.00
1501 LBC 152 16.00 21.00 26.00 37.00 0.00 0.00
1502 LBC 153 24.00 20.00 34.00 22.00 0.00 0.00
1503 LBC 154 25.00 22.00 28.00 25.00 0.00 0.00
1504 LBC 155 21.00 28.00 17.00 34.00 0.00 0.00
1505 LBC 156 16.00 23.00 36.00 25.00 0.00 0.00
1506 LBC 157 23.00 34.00 20.00 23.00 0.00 0.00
1507 LBC 158 21.00 33.00 21.00 25.00 0.00 0.00
1508 LBC 159 19.00 15.00 44.00 22.00 0.00 0.00
1509 LBC 160 24.00 31.00 22.00 23.00 0.00 0.00
1510 LBC 161 13.00 28.00 40.00 19.00 0.00 0.00
1511 LBC 162 33.00 19.00 20.00 28.00 0.00 0.00
1512 LBC 163 23.00 26.00 31.00 20.00 0.00 0.00
1513 LBC 164 33.00 19.00 20.00 28.00 0.00 0.00
1514 LBC 165 13.00 16.00 37.00 34.00 0.00 0.00
1515 LBC 166 20.00 36.00 30.00 14.00 0.00 0.00
1516 LBC 167 17.00 28.00 25.00 30.00 0.00 0.00
1517 LBC 168 16.00 24.00 31.00 29.00 0.00 0.00
1518 LBC 169 21.00 23.00 21.00 35.00 0.00 0.00
1519 LBC 170 22.00 24.00 27.00 27.00 0.00 0.00
1520 LBC 171 23.00 30.00 31.00 16.00 0.00 0.00
1521 LBC 172 24.00 22.00 30.00 24.00 0.00 0.00
1522 LBC 173 24.00 17.00 33.00 26.00 0.00 0.00
1523 LBC 174 21.00 24.00 33.00 22.00 0.00 0.00
1524 LBC 175 34.00 19.00 34.00 13.00 0.00 0.00
1525 LBC 176 17.00 37.00 24.00 22.00 0.00 0.00
1526 LBC 177 24.00 24.00 25.00 27.00 0.00 0.00
1527 LBC 178 19.00 26.00 30.00 25.00 0.00 0.00
1528 LBC 179 24.00 20.00 20.00 36.00 0.00 0.00
1529 LBC 180 22.00 25.00 31.00 22.00 0.00 0.00
1530 LBC 181 21.00 17.00 38.00 24.00 0.00 0.00
1531 LBC 182 35.00 21.00 20.00 24.00 0.00 0.00
1532 LBC 183 28.00 15.00 27.00 30.00 0.00 0.00
1533 LBC 184 17.00 30.00 29.00 24.00 0.00 0.00
1534 LBC 185 16.00 32.00 33.00 19.00 0.00 0.00
1535 LBC 186 21.00 22.00 36.00 21.00 0.00 0.00
1536 LBC 187 24.00 13.00 41.00 22.00 0.00 0.00
1537 LBC 188 29.00 19.00 30.00 22.00 0.00 0.00
1538 LBC 189 19.00 23.00 33.00 25.00 0.00 0.00
1539 LBC 190 24.00 28.00 25.00 23.00 0.00 0.00
1540 LBC 191 28.00 21.00 29.00 22.00 0.00 0.00
1541 LBC 192 37.00 25.00 13.00 25.00 0.00 0.00
1542 LBC 193 18.00 26.00 25.00 31.00 0.00 0.00
1543 LBC 194 21.00 34.00 24.00 21.00 0.00 0.00
1544 LBC 195 16.00 28.00 21.00 35.00 0.00 0.00
1545 LBC 196 23.00 23.00 27.00 27.00 0.00 0.00
1546 LBC 197 18.00 20.00 24.00 38.00 0.00 0.00
1547 LBC 198 15.00 19.00 39.00 27.00 0.00 0.00
1548 LBC 199 23.00 17.00 27.00 33.00 0.00 0.00
1549 LBC 200 25.00 27.00 23.00 25.00 0.00 0.00
1550 LBC 201 26.00 19.00 25.00 30.00 0.00 0.00
1551 LBC 202 23.00 23.00 21.00 33.00 0.00 0.00
1552 LBC 203 21.00 19.00 32.00 28.00 0.00 0.00
1553 LBC 204 26.00 29.00 24.00 21.00 0.00 0.00
1554 LBC 205 16.00 23.00 21.00 40.00 0.00 0.00
1555 LBC 206 28.00 25.00 21.00 26.00 0.00 0.00
1556 LBC 207 22.00 22.00 19.00 37.00 0.00 0.00
1557 LBC 208 12.00 32.00 32.00 24.00 0.00 0.00
1558 LBC 209 18.00 20.00 15.00 47.00 0.00 0.00
1559 LBC 210 18.00 15.00 45.00 22.00 0.00 0.00
1560 LBC 211 28.00 14.00 28.00 30.00 0.00 0.00
1561 LBC 212 23.00 27.00 22.00 28.00 0.00 0.00
1562 LBC 213 22.00 12.00 34.00 32.00 0.00 0.00
1563 LBC 214 16.00 24.00 26.00 34.00 0.00 0.00
1564 LBC 215 28.00 22.00 25.00 25.00 0.00 0.00
1565 LBC 216 18.00 17.00 26.00 39.00 0.00 0.00
1566 LBC 217 27.00 30.00 16.00 27.00 0.00 0.00
1567 LBC 218 18.00 24.00 24.00 34.00 0.00 0.00
1568 LBC 219 19.00 18.00 24.00 39.00 0.00 0.00
1569 LBC 220 28.00 23.00 24.00 25.00 0.00 0.00
1570 LBC 221 20.00 24.00 20.00 36.00 0.00 0.00
1571 LBC 222 22.00 21.00 19.00 38.00 0.00 0.00
1572 LBC 223 19.00 22.00 33.00 26.00 0.00 0.00
1573 LBC 224 19.00 20.00 27.00 34.00 0.00 0.00
1574 LBC 225 14.00 32.00 34.00 20.00 0.00 0.00
1575 LBC 226 20.00 20.00 29.00 31.00 0.00 0.00
1576 LBC 227 17.00 22.00 26.00 35.00 0.00 0.00
1577 LBC 228 34.00 20.00 25.00 21.00 0.00 0.00
1578 LBC 229 22.00 27.00 16.00 35.00 0.00 0.00
1579 LBC 230 23.00 33.00 15.00 29.00 0.00 0.00
1580 LBC 231 20.00 27.00 31.00 22.00 0.00 0.00
1581 LBC 232 25.00 23.00 11.00 41.00 0.00 0.00
1582 LBC 233 22.00 25.00 27.00 26.00 0.00 0.00
1583 LBC 234 14.00 27.00 23.00 36.00 0.00 0.00
1584 LBC 235 17.00 11.00 32.00 40.00 0.00 0.00
1585 LBC 236 29.00 20.00 24.00 27.00 0.00 0.00
1586 LBC 237 16.00 19.00 23.00 42.00 0.00 0.00
1587 LBC 238 22.00 25.00 29.00 24.00 0.00 0.00
1588 LBC 239 18.00 8.00 17.00 57.00 0.00 0.00
1589 LBC 240 27.00 26.00 14.00 33.00 0.00 0.00
1590 LBC 241 21.00 22.00 17.00 40.00 0.00 0.00
1591 LBC 242 26.00 28.00 10.00 36.00 0.00 0.00
1592 LBC 243 25.00 15.00 24.00 36.00 0.00 0.00
1593 LBC 244 15.00 24.00 16.00 45.00 0.00 0.00
1594 LBC 245 24.00 23.00 19.00 34.00 0.00 0.00
1595 LBC 246 18.00 25.00 29.00 28.00 0.00 0.00
1596 LBC 247 30.00 13.00 14.00 43.00 0.00 0.00
1597 LBC 248 22.00 17.00 26.00 35.00 0.00 0.00
1598 LBC 249 25.00 22.00 22.00 31.00 0.00 0.00
1599 LBC 250 25.00 20.00 20.00 35.00 0.00 0.00
1600 LBC 251 13.00 17.00 40.00 30.00 0.00 0.00
1092 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs 1601 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs
1093 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count 1602 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count
1094 RL 251 200 1603 RL 251 200
1604 # Read lengths - first fragments. Use `grep ^FRL | cut -f 2-` to extract this part. The columns are: read length, count
1605 FRL 251 100
1606 # Read lengths - last fragments. Use `grep ^LRL | cut -f 2-` to extract this part. The columns are: read length, count
1607 LRL 251 100
1095 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions 1608 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions
1096 ID 1 1 0 1609 ID 1 1 0
1097 ID 2 1 0 1610 ID 2 1 0
1098 ID 4 2 0 1611 ID 4 2 0
1099 ID 10 5 0 1612 ID 10 5 0
1127 IC 239 1 0 0 0 1640 IC 239 1 0 0 0
1128 IC 240 1 0 0 0 1641 IC 240 1 0 0 0
1129 IC 241 1 0 0 0 1642 IC 241 1 0 0 0
1130 IC 247 1 0 0 0 1643 IC 247 1 0 0 0
1131 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part. 1644 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part.
1132 COV [1-1] 1 1 1645 COV [2-2] 2 1
1133 COV [7-7] 7 1 1646 COV [3-3] 3 3
1647 COV [4-4] 4 1
1648 COV [5-5] 5 5
1649 COV [9-9] 9 3
1650 COV [10-10] 10 2
1651 COV [11-11] 11 3
1652 COV [12-12] 12 2
1653 COV [13-13] 13 1
1654 COV [14-14] 14 1
1655 COV [15-15] 15 1
1134 COV [18-18] 18 1 1656 COV [18-18] 18 1
1657 COV [20-20] 20 6
1658 COV [21-21] 21 6
1659 COV [23-23] 23 3
1135 COV [24-24] 24 1 1660 COV [24-24] 24 1
1136 COV [25-25] 25 249 1661 COV [25-25] 25 211
1137 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile 1662 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile
1138 GCD 0.0 100.000 0.000 0.000 0.000 0.000 0.000 1663 GCD 0.0 100.000 0.000 0.000 0.000 0.000 0.000