Mercurial > repos > devteam > table_annovar
diff tool-data/annovar_index.loc @ 0:75b252cf390e
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| author | devteam |
|---|---|
| date | Mon, 02 Dec 2013 15:29:39 -0500 |
| parents | |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/annovar_index.loc Mon Dec 02 15:29:39 2013 -0500 @@ -0,0 +1,20 @@ +# +# Database name (value), dbkey, type, and path. +# +# Sample entries for gene-based annotations: +#refGene hg19 gene_ann /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +#wgEncodeGencodeCompV14 hg19 gene_ann /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +# +# Samples entries for region-based annotations: +# +#genomicSuperDups hg19 region /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +#phastConsElements46way hg19 region /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +# +# Sample entries for filter-based annotations: +# +#1000g2012apr_all hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +#avsift hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +#snp137NonFlagged hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +#esp6500si_all hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndice/ +#snp137 hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ +#cosmic64 hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/ \ No newline at end of file