Mercurial > repos > devteam > table_annovar

view tool-data/annovar_index.loc.sample @ 2:9c75a9b5ecd2

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Add help to tool.
author jeremy goecks <jeremy.goecks@emory.edu>
date Mon, 27 Jan 2014 11:32:02 -0500
parents a6c64723f5ce
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#
# Database name (value), dbkey, type, and path.
#
# Sample entries for gene-based annotations:
#refGene	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#wgEncodeGencodeCompV14	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#
# Samples entries for region-based annotations:
#
#genomicSuperDups	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#phastConsElements46way	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#
# Sample entries for filter-based annotations:
#
#1000g2012apr_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#avsift	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#snp137NonFlagged	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#esp6500si_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndice/
#snp137	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
#cosmic64	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/