Mercurial > repos > devteam > ucsc_custom_track
comparison build_ucsc_custom_track_code.py @ 2:3d87079756e1 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
| author | devteam |
|---|---|
| date | Mon, 28 Feb 2022 20:06:04 +0000 |
| parents | 618e56c3109b |
| children |
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| 1:760f588e8a26 | 2:3d87079756e1 |
|---|---|
| 1 # runs after the job (and after the default post-filter) | 1 # runs after the job (and after the default post-filter) |
| 2 | 2 |
| 3 # Older py compatibility | 3 def validate_input(trans, error_map, param_values, page_param_map): |
| 4 try: | |
| 5 set() | |
| 6 except: | |
| 7 from sets import Set as set | |
| 8 | |
| 9 def validate_input( trans, error_map, param_values, page_param_map ): | |
| 10 dbkeys = set() | 4 dbkeys = set() |
| 11 tracks = param_values['tracks'] | 5 tracks = param_values['tracks'] |
| 12 for track in tracks: | 6 for track in tracks: |
| 13 if track['input']: | 7 if track['input']: |
| 14 dbkeys.add( track['input'].dbkey ) | 8 dbkeys.add(track['input'].dbkey) |
| 15 if len( dbkeys ) > 1: | 9 if len(dbkeys) > 1: |
| 16 # FIXME: Should be able to assume error map structure is created | 10 # FIXME: Should be able to assume error map structure is created |
| 17 if 'tracks' not in error_map: | 11 if 'tracks' not in error_map: |
| 18 error_map['tracks'] = [ dict() for t in tracks ] | 12 error_map['tracks'] = [dict() for t in tracks] |
| 19 for i in range( len( tracks ) ): | 13 for i in range(len(tracks)): |
| 20 error_map['tracks'][i]['input'] = \ | 14 error_map['tracks'][i]['input'] = \ |
| 21 "All datasets must belong to same genomic build" | 15 "All datasets must belong to same genomic build" |
