Mercurial > repos > devteam > vcfbreakcreatemulti
diff test-data/vcfbreakcreatemulti-test1.vcf @ 1:3aa04b92957f draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfbreakcreatemulti commit 0b9b6512272b82637c2f1e831367e89aed77ae79
| author | devteam |
|---|---|
| date | Thu, 15 Sep 2016 16:04:07 -0400 |
| parents | f0dae4ac267e |
| children |
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--- a/test-data/vcfbreakcreatemulti-test1.vcf Thu Mar 19 12:43:19 2015 -0400 +++ b/test-data/vcfbreakcreatemulti-test1.vcf Thu Sep 15 16:04:07 2016 -0400 @@ -24,11 +24,11 @@ 19 112 . A G 10 . . GT:HQ 0|0:10,10 0|0:10,10 0/1:3,3 20 14370 rs6054257 G A 29 PASS AF=0.5;DP=14;NS=3;DB;H2 GT:GQ:DP:HQ 0|0:48:1:51,51 1|0:48:8:51,51 1/1:43:5:.,. 20 17330 . T A 3 q10 AF=0.017;DP=11;NS=3 GT:GQ:DP:HQ 0|0:49:3:58,50 0|1:3:5:65,3 0/0:41:3:.,. -20 1110696 rs6040355 A G 67 PASS AA=T;AF=0.333,0.667;DP=10;NS=2;DB GT:GQ:DP:HQ ./1:21:6:23,27 ./1:2:0:18,2 ./.:35:4:.,. -20 1110696 rs6040355 A T 67 PASS AA=T;AF=0.333,0.667;DP=10;NS=2;DB GT:GQ:DP:HQ ./1:21:6:23,27 ./1:2:0:18,2 1/1:35:4:.,. +20 1110696 rs6040355 A G 67 PASS AA=T;AF=0.333,0.667;DP=10;NS=2;DB GT:GQ:DP:HQ 1|.:21:6:23,27 .|1:2:0:18,2 ./.:35:4:.,. +20 1110696 rs6040355 A T 67 PASS AA=T;AF=0.333,0.667;DP=10;NS=2;DB GT:GQ:DP:HQ .|1:21:6:23,27 1|.:2:0:18,2 1/1:35:4:.,. 20 1230237 . T . 47 PASS AA=T;DP=13;NS=3 GT:GQ:DP:HQ 0|0:54:.:56,60 0|0:48:4:51,51 0/0:61:2:.,. 20 1234567 microsat1 G GA 50 PASS AA=G;AC=3,1;AN=6;DP=9;NS=3 GT:GQ:DP 0/1:.:4 ./0:17:2 1/1:40:3 20 1234567 microsat1 G GAC 50 PASS AA=G;AC=3,1;AN=6;DP=9;NS=3 GT:GQ:DP ./0:.:4 0/1:17:2 ./.:40:3 -20 1235237 . T . 0 . . GT 0/0 0|0 . -X 10 rsTest AC A 10 PASS . GT 0 0/1 ./0 -X 10 rsTest AC ATG 10 PASS . GT 0 ./0 0/1 +20 1235237 . T . 0 . . GT 0/0 0|0 ./. +X 10 rsTest AC A 10 PASS . GT 0 0/1 0|. +X 10 rsTest AC ATG 10 PASS . GT 0 ./0 0|1