Mercurial > repos > devteam > vcfgeno2haplo
comparison test-data/vcfgeno2haplo-test1.vcf @ 0:2bdb74ab3270 draft
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| author | devteam |
|---|---|
| date | Thu, 19 Mar 2015 14:32:31 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:2bdb74ab3270 |
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| 1 ##fileformat=VCFv4.1 | |
| 2 ##fileDate=20140610 | |
| 3 ##source=Dan | |
| 4 ##reference=file:///galaxy/data/phiX/sam_index/phiX.fa | |
| 5 ##filter="AF > .001" | |
| 6 ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed"> | |
| 7 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed"> | |
| 8 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> | |
| 9 ##FORMAT=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed"> | |
| 10 ##FORMAT=<ID=AF,Number=.,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed"> | |
| 11 ##FORMAT=<ID=NC,Number=.,Type=String,Description="Nucleotide and indel counts"> | |
| 12 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT groupA groupB |