# HG changeset patch
# User devteam
# Date 1447264804 18000
# Node ID 401f29f278f00a1fcf0c4727506a6f9b5b22f3d6
# Parent  2bdb74ab3270824dfd6c9c3d6752ed099bd2aee7
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit a1517c9d22029095120643bbe2c8fa53754dd2b7

diff -r 2bdb74ab3270 -r 401f29f278f0 tool-data/tool_data_table_conf.xml.sample
--- a/tool-data/tool_data_table_conf.xml.sample	Thu Mar 19 14:32:31 2015 -0400
+++ b/tool-data/tool_data_table_conf.xml.sample	Wed Nov 11 13:00:04 2015 -0500
@@ -2,7 +2,7 @@
 <tables>
     <!-- Location of SAMTools indexes and other files -->
     <table name="fasta_indexes" comment_char="#">
-        <columns>line_type, value, path</columns>
+        <columns>value, dbkey, name, path</columns>
         <file path="tool-data/fasta_indexes.loc" />
     </table>
 </tables>
diff -r 2bdb74ab3270 -r 401f29f278f0 vcfgeno2haplo.xml
--- a/vcfgeno2haplo.xml	Thu Mar 19 14:32:31 2015 -0400
+++ b/vcfgeno2haplo.xml	Wed Nov 11 13:00:04 2015 -0500
@@ -38,7 +38,7 @@
 	 <param name="input_vcf" type="data" format="vcf" label="Select VCF dataset" />
        </when>
      </conditional>
-     <param name="window_size" type="text" size="4" value="30" label="compare records up to this many bp away" help="--window-size option (default = 30)" />
+     <param name="window_size" type="text" value="30" label="compare records up to this many bp away" help="--window-size option (default = 30)" />
      <param name="output_option" type="boolean" truevalue="-o" falsevalue="" label="What to report?" help="--only-variants option" />
 <!--       <option value=" ">Output entire haplotype</option>
        <option value="-o">Don't output the entire haplotype, just concatenate REF/ALT strings (delimited by &quot;:&quot;)</option>