Mercurial > repos > dfornika > data_manager_build_kraken2_database

comparison data_manager/kraken2_build_special.py @ 12:039a65ff445d draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
author dfornika
date Tue, 05 Mar 2019 15:11:05 -0500
parents 1dc93ae264e6
children
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11:1dc93ae264e6 12:039a65ff445d
40 ]) 40 ])
41 41
42 database_name = " ".join([ 42 database_name = " ".join([
43 special_database_names[kraken2_args["special"]], 43 special_database_names[kraken2_args["special"]],
44 "(Created:", 44 "(Created:",
45 now + "," 45 now + ",",
46 "kmer-len=" + str(kraken2_args["kmer_len"]) + ",", 46 "kmer-len=" + str(kraken2_args["kmer_len"]) + ",",
47 "minimizer-len=" + str(kraken2_args["minimizer_len"]) + ",", 47 "minimizer-len=" + str(kraken2_args["minimizer_len"]) + ",",
48 "minimizer-spaces=" + str(kraken2_args["minimizer_spaces"]) + ")", 48 "minimizer-spaces=" + str(kraken2_args["minimizer_spaces"]) + ")",
49 ]) 49 ])
50 50