Mercurial > repos > dfornika > data_manager_build_kraken2_database
diff data_manager_conf.xml @ 12:039a65ff445d draft
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
author | dfornika |
---|---|
date | Tue, 05 Mar 2019 15:11:05 -0500 |
parents | d0b9df6c21dd |
children | 4c9f9d6098eb |
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--- a/data_manager_conf.xml Tue Mar 05 14:33:23 2019 -0500 +++ b/data_manager_conf.xml Tue Mar 05 15:11:05 2019 -0500 @@ -47,4 +47,20 @@ </output> </data_table> </data_manager> + <data_manager tool_file="data_manager/kraken2_build_minikraken.xml" id="kraken2_build_minikraken" version="1.0"> + <data_table name="kraken2_databases"> + <output> + <column name="value"/> + <column name="name"/> + <column name="path" output_ref="out_file"> + <move type="directory"> + <source>${path}</source> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + </data_manager> </data_managers>