Mercurial > repos > dfornika > kraken2

comparison macros.xml @ 10:a74785cdf5e3 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/blob/master/tools/kraken2 commit 593a4002db3f2513974809a94db514c05fa589f6-dirty
author dfornika
date Mon, 04 Mar 2019 17:25:29 -0500
parents a811afe91eab
children da1a2d98dab1
comparison
equal deleted inserted replaced
9:a811afe91eab 10:a74785cdf5e3
13 <xml name="citations"> 13 <xml name="citations">
14 <citations> 14 <citations>
15 <citation type="doi">10.1186/gb-2014-15-3-r46</citation> 15 <citation type="doi">10.1186/gb-2014-15-3-r46</citation>
16 </citations> 16 </citations>
17 </xml> 17 </xml>
18 <token name="@SET_DATABASE_PATH@">if [ -d '${kraken2_database.fields.path}/${kraken2_database.fields.name}' ]; then export KRAKEN2_DB_PATH='${kraken_database.fields.path}/${kraken_database.fields.name}'; else export KRAKEN2_DB_PATH='${kraken_database.fields.path}'; fi</token> 18 <token name="@SET_DATABASE_PATH@">if [ -d '${kraken2_database.fields.path}/${kraken2_database.fields.name}' ]; then export KRAKEN2_DB_PATH='${kraken2_database.fields.path}/${kraken2_database.fields.name}'; else export KRAKEN2_DB_PATH='${kraken2_database.fields.path}'; fi</token>
19 </macros> 19 </macros>