0
|
1 <tool id="countsAroundTSS" name="None" version="0.1.0">
|
|
2 <requirements>
|
|
3 </requirements>
|
|
4 <command detect_errors="exit_code"><![CDATA[
|
|
5 Rscript countsAroundTSS.R --input $mm10 --input $500 --input $500 --input $transcripts_mm10_UCSC --output $ENCFF027UTM
|
|
6 ]]></command>
|
|
7 <inputs>
|
|
8 <param type="data" name="mm10" format="" />
|
|
9 <param type="data" name="500" format="" />
|
|
10 <param type="data" name="500" format="" />
|
|
11 <param type="data" name="transcripts_mm10_UCSC" format="sqlite" />
|
|
12 </inputs>
|
|
13 <outputs>
|
|
14 <data name="ENCFF027UTM" format="txt" />
|
|
15 </outputs>
|
|
16 <help><![CDATA[
|
|
17 TODO: Fill in help.
|
|
18 ]]></help>
|
|
19 <citations>
|
|
20 <citation type="bibtex">
|
|
21 @misc{renameTODO,
|
|
22 author = {LastTODO, FirstTODO},
|
|
23 year = {TODO},
|
|
24 title = {TODO},
|
|
25 url = {https://www.cyberciti.biz/faq/list-the-contents-of-a-tar-or-targz-file/},
|
|
26 }</citation>
|
|
27 </citations>
|
|
28 </tool> |