Mercurial > repos > dktanwar > test_r
comparison tmpnt.xml @ 1:6bcf6f6a347d draft default tip
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author | dktanwar |
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date | Tue, 24 Oct 2017 07:06:17 -0400 |
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0:cc424daed0b0 | 1:6bcf6f6a347d |
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1 <tool id="tmpnt" name="None" version="0.1.0"> | |
2 <requirements> | |
3 <requirement type="package">R</requirement> | |
4 <requirement type="package">bioconductor-edgeR</requirement> | |
5 <requirement type="package">bioconductor-limma</requirement> | |
6 <requirement type="package">r-getopt</requirement> | |
7 </requirements> | |
8 <command detect_errors="exit_code"><![CDATA[ | |
9 Rscript tmpnt.R --input $input --output $output | |
10 ]]></command> | |
11 <inputs> | |
12 <param type="data" name="input" format="txt" /> | |
13 </inputs> | |
14 <outputs> | |
15 <data name="output" format="txt" /> | |
16 </outputs> | |
17 <tests> | |
18 <test> | |
19 <param name="input" value="input.txt"/> | |
20 <output name="output" file="output.txt"/> | |
21 </test> | |
22 </tests> | |
23 <help><![CDATA[ | |
24 Fill in help. | |
25 ]]></help> | |
26 <citations> | |
27 <citation type="doi">10.1186/gb-2010-11-8-r86</citation> | |
28 </citations> | |
29 </tool> |