Mercurial > repos > drosofff > msp_sr_bowtie
comparison sRbowtie.xml @ 3:68b71bd388eb draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_bowtie commit 263dcfb32e54c4a033cf4a584b961938da969848
| author | mvdbeek |
|---|---|
| date | Sun, 18 Sep 2016 12:54:55 -0400 |
| parents | c1bfa227bbb6 |
| children | 615d2550977f |
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| 2:c1bfa227bbb6 | 3:68b71bd388eb |
|---|---|
| 1 <tool id="bowtieForSmallRNA" name="sRbowtie" version="1.1.2"> | 1 <tool id="bowtieForSmallRNA" name="sRbowtie" version="1.1.2.1"> |
| 2 <description>for FASTA small reads</description> | 2 <description>for FASTA small reads</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="0.12.7">bowtie</requirement> | 4 <requirement type="package" version="1.1.2">bowtie</requirement> |
| 5 <requirement type="package" version="1.2">samtools</requirement> | 5 <requirement type="package" version="1.2">samtools</requirement> |
| 6 </requirements> | 6 </requirements> |
| 7 <command interpreter="python"> sRbowtie.py --input $input | 7 <command interpreter="python"> sRbowtie.py --input $input |
| 8 --input-format $input.extension | 8 --input-format $input.extension |
| 9 --method $method | 9 --method $method |