Mercurial > repos > drosofff > msp_sr_readmap_and_size_histograms

changeset 12:076008825416 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_readmap_and_size_histograms commit a91db0ffc9ffa13820088fc2756f00c741a01165
author drosofff
date Tue, 19 Dec 2017 13:06:51 -0500
parents 791edb7b7ea1
children 7234d438f495
files readmap.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/readmap.xml	Tue Dec 19 12:54:36 2017 -0500
+++ b/readmap.xml	Tue Dec 19 13:06:51 2017 -0500
@@ -1,4 +1,4 @@
-<tool id="Readmap" name="Generate readmap and histograms from alignment files" version="1.2.2">
+<tool id="Readmap" name="Generate readmap and histograms from alignment files" version="1.2.3">
     <description>from sRbowtie aligment</description>
     <requirements>
         <requirement type="package" version="1.2.0">bowtie</requirement>
@@ -45,7 +45,7 @@
             --gff
             $gff
         #end if
-        ; Rscript $__tool_directory__/plot_size_readmap.r
+        ; Rscript '$__tool_directory__'/plot_size_readmap.r
         --readmap_tab "$readmap_dataframe"
         --size_distribution_tab "$size_distribution_dataframe"
         --readmap_pdf "$readmap_PDF"