comparison sam_to_fastq.py @ 1:8acb72264319 draft default tip

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sam_to_fastq commit 55671fc041c29c7985cbb44e6b49a10e1889f907

0:55107d4a728c

    return args
    
        
def print_fastq_sequence(samline, file):
  samfields = samline[:-1].split("\t")
  file.write ( '@%s\n%s\n+\n%s' % (samfields[0], samfields[9], samfields[10]) )

def main(input, output):
    infile = open (input, "r")
    outfile = open (output, "w")
    with open (input, "r") as infile:

1:8acb72264319

    return args
    
        
def print_fastq_sequence(samline, file):
  samfields = samline[:-1].split("\t")
  file.write ( '@%s\n%s\n+\n%s\n' % (samfields[0], samfields[9], samfields[10]) )

def main(input, output):
    infile = open (input, "r")
    outfile = open (output, "w")
    with open (input, "r") as infile: