Mercurial > repos > drosofff > sam_to_fastq
changeset 1:8acb72264319 draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sam_to_fastq commit 55671fc041c29c7985cbb44e6b49a10e1889f907
| author | drosofff |
|---|---|
| date | Mon, 21 Mar 2016 18:03:40 -0400 |
| parents | 55107d4a728c |
| children | |
| files | sam_to_fastq.py |
| diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/sam_to_fastq.py Mon Mar 21 17:33:26 2016 -0400 +++ b/sam_to_fastq.py Mon Mar 21 18:03:40 2016 -0400 @@ -15,7 +15,7 @@ def print_fastq_sequence(samline, file): samfields = samline[:-1].split("\t") - file.write ( '@%s\n%s\n+\n%s' % (samfields[0], samfields[9], samfields[10]) ) + file.write ( '@%s\n%s\n+\n%s\n' % (samfields[0], samfields[9], samfields[10]) ) def main(input, output): infile = open (input, "r")