Mercurial > repos > earlhaminst > ensembl_get_feature_info
comparison test-data/genetree.phyloxml @ 0:874c067e4527 draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/Ensembl-REST commit e80af91bced56efdb4fbf62ac03232655a22f25d-dirty
author | earlhaminst |
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date | Thu, 11 Aug 2016 14:29:29 -0400 |
parents | |
children | 396f0f54d115 |
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1 <?xml version="1.0" encoding="UTF-8"?> | |
2 | |
3 <phyloxml xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://www.phyloxml.org"> | |
4 <phylogeny rooted="true" type="gene tree"> | |
5 <clade branch_length="0"> | |
6 <taxonomy> | |
7 <id>117571</id> | |
8 <scientific_name>Euteleostomi</scientific_name> | |
9 </taxonomy> | |
10 <clade branch_length="0.153275"> | |
11 <confidence type="bootstrap">95</confidence> | |
12 <taxonomy> | |
13 <id>41665</id> | |
14 <scientific_name>Neopterygii</scientific_name> | |
15 </taxonomy> | |
16 <clade branch_length="0.155187"> | |
17 <confidence type="bootstrap">19</confidence> | |
18 <taxonomy> | |
19 <id>186625</id> | |
20 <scientific_name>Clupeocephala</scientific_name> | |
21 </taxonomy> | |
22 <clade branch_length="0.133192"> | |
23 <confidence type="bootstrap">18</confidence> | |
24 <taxonomy> | |
25 <id>123368</id> | |
26 <scientific_name>Acanthomorphata</scientific_name> | |
27 </taxonomy> | |
28 <clade branch_length="0.374304"> | |
29 <name>ENSGMOG00000009699</name> | |
30 <taxonomy> | |
31 <id>8049</id> | |
32 <scientific_name>Gadus morhua</scientific_name> | |
33 </taxonomy> | |
34 <sequence> | |
35 <accession source="Ensembl">ENSGMOP00000010385</accession> | |
36 <name>brca2-201</name> | |
37 <location>GeneScaffold_2233:16156-29802</location> | |
38 <mol_seq is_aligned="0">LARDLQDMRLRKKKRQTVRPLPGSLFLAKASGGARIPLRAALRQLYQHGVHQPVWTVTAENAESFRLSFRRFFRWGSSVSRGVQLADGGWLVPRDDWTLGKEEFYRALCDSPGVDVKLLSQEWAYNHYRWVVWKLASMERSFPLTMASLWLNPEQILLQLKYRYDVEVDHSRRPALRKITERDDAAAKTLVLCVCGVVPGADQQPQGSHAPPPGVVWLTDGWYAIKAQLDAPLTAMLRRGGAGGKLVVYGAELVGSQDGCSPLEAPEGLMLKIGANSCRRARWDAKLGFQRDPRPFLLRLSSLFSTGGAVGCVDLLILRSYPVLWMEKKQDGVFVFRSGRAEEREARRFDDHNNKTMEALYAKIQADIQREDKGSARERNSGEELYEAFENDPAYLEACLNDQQLEVLQSYRRSVLEKRQAGLQERCRRALEQAQESQGGCPRRDVTPVWKLCVVDARAPPGYMLNVWRPPADLQAQLKEGARYRVYNLSVTAGKKRNPGASVQLTATSKTHFQEVQVGQDWLSDHFQARQAVHFQELQRPEVQSACGEVDLVGYVVTTADTHGTSPVVYLVDGDLNLVKVRCFSSLLQWGLEELVKPATLLALSNLQLSARRATTLPVLYASDLTAFSSNPREAHLQSSHSNADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRALDYLSRMPSPPPLGPLGSLASPACVKKTFNPPRRSTTPAAVATTRQTPAHGPRVGPWQEEEWENDEGLAQIDTQVL</mol_seq> | |
39 </sequence> | |
40 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gadus_morhua</property> | |
41 </clade> | |
42 <clade branch_length="0.201095"> | |
43 <taxonomy> | |
44 <id>1489872</id> | |
45 <scientific_name>Percomorphaceae</scientific_name> | |
46 </taxonomy> | |
47 <clade branch_length="0.015782"> | |
48 <confidence type="bootstrap">38</confidence> | |
49 <taxonomy> | |
50 <id>1489922</id> | |
51 <scientific_name>Eupercaria</scientific_name> | |
52 </taxonomy> | |
53 <clade branch_length="0.159219"> | |
54 <name>ENSGACG00000011490</name> | |
55 <taxonomy> | |
56 <id>69293</id> | |
57 <scientific_name>Gasterosteus aculeatus</scientific_name> | |
58 </taxonomy> | |
59 <sequence> | |
60 <accession source="Ensembl">ENSGACP00000015199</accession> | |
61 <name>brca2-201</name> | |
62 <location>groupI:13362884-13366744</location> | |
63 <mol_seq is_aligned="0">LPNVELAQDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVTRIPLKAALVFLLQLYRHGVHQHVCEISSETAESFRFNLKQFIKREALLDGGGVQLADGGWLIPSKDGTAGKEEFYRALCDTPGVDPKLISDGWVDNHYRWVVWKQASMERSFPETMGGLCLTPEQVLLQLKYRYDVEVDHSRRPALRRITERDDTAAKTLVLCVCGVVSRSFDDSKTPRGADAGGGNPSAVVWLTDGWYAIRAQLDEPLTAMLRNGRVAVGSKLIVHGAQLVGSQEACSPLEAPEALMLKICANSSRPVRWDAKLGFHKDPRPFLLPLSCLYSSGGQVGCVDMIVLRSYPIQWMERKPEGGVVFRSVRAEEKEAKRFNGLKQKAMEILFAKIQDEFEKEDKGRTCDFTTQAISRQAIAGLQAGEELCEAVGEDPAHLEALLSEQQVETLNTYRRCVMEKKQAQLHDRFQRALESAEASEGSCPKREVTPVWRLGVADSRDQRGRVYQLNLWRPSSDLQALLKEGRRYKVYNLTTSDGKKHNGSSNVQLTGTKKTQFQDLQASREWLSTRFQPRVSACFVDLQNPEFQSLCGEVDLTGFVIQIVDGQGFSPAFYLADGELNFVKVRCFSSFAQSGLEDLVKPRVLLSLSNLQLRGQSASPTPVVYAGDLTVFSANPKDAHLQESLSQNKNLRQSQENFFLIAEETLSRLVQSDGRRPLSSPALHTRTPALATSMIQDTTASVKCVLLMQGASQQLVRSRGTFTPVSRKPPAANCSTEKDAGSVKRRRALNYLSHIPSPPPLLNLGSVASPCVNKTFNPPRRSGTPSTLKTVQTPAHKAQKVDSLVEDEWVNDEELAMIDTQAL</mol_seq> | |
64 </sequence> | |
65 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gasterosteus_aculeatus</property> | |
66 </clade> | |
67 <clade branch_length="0.217419"> | |
68 <confidence type="bootstrap">100</confidence> | |
69 <taxonomy> | |
70 <id>31031</id> | |
71 <scientific_name>Tetraodontidae</scientific_name> | |
72 </taxonomy> | |
73 <clade branch_length="0.113355"> | |
74 <name>ENSTNIG00000016261</name> | |
75 <taxonomy> | |
76 <id>99883</id> | |
77 <scientific_name>Tetraodon nigroviridis</scientific_name> | |
78 </taxonomy> | |
79 <sequence> | |
80 <accession source="Ensembl">ENSTNIP00000002435</accession> | |
81 <name>brca2-201</name> | |
82 <location>16:4700614-4705074</location> | |
83 <mol_seq is_aligned="0">VSFSSDTPRKPKAGSLSSEFTDRFLAQEALDCTKALLEDERLVDDPHMTGECLHRCPQFSLLVNLFVKPHTAVLIPEQPPLKRRLLEEFDRTDGSSRGSALNPEKCSPNGIMGDRRVFKCSVSFQPNITTPHRICSQKAERPVSFLSRRSGTNYVETSLPNTTPTKVSALRDSNEARLQKSNFIPPFIKNVKLDTPNSKTASTFVPPFKKSRNSSKTEEEEPKHHFIPPFTNPCATSSTKKHTAGHLHNVELARDMQGMRIRKKKRQTILPLPGSLFLKKSSGVTRIPLKSAVNGKPPARYTPKQLYGLGVPLNVLEITSETAGSFRFSLQQFVKLESLTDKGGIQLADGGWLIPRNDGTAGKEEFYRALCDTTGVDPKLISEEWVYNHYRWIVWKQASMERSFPEQLGSLCLTPEQVLLQLKYRYDIEVDQSRRPALRKIMERDDTAAKTLILCVCGVVSRGSSPQKQGLGGVAAPSSDPQVENPFAVVWLTDGWYSIKAQLDGPLTSMLNRGRLPVGGKLIIHGAQLVGSQDACSPLEAPESIMLKIFANSSRRARWDAKLGFYRDPRPFLLPVSSLYNSGGPVGCVDIIILRSYPTLWMERKPEGGTVFRSGRAEEKEARRYNVHKEKAMEILFDKIQAEFEKEERDNRKPRSRRRTIGDQDIKSLQDGEELYEAVGDDPAYLEAHLTEQQAETLQNYKRLLIEKKQAELQDRYRRAVETAEDGTGSCPKRDVAPVWRLSIADFMEKPGSVYQLNIWRPPSELQSLLKEGCRYKVYNLTTTDSKKQGGNTTVQLSGTKKTQFEDLQASEELLSTYFQPRVSATFIDLQDPEFHSLCGEVDLTGYVISIIDGQGFSPAFYLTDGKQNFVKVRCFSSFAQSGLEDVIKPSVLLALSNLQLRGQATSPTPVLYAGDLTVFSTNPKEVHLQESFSQLKTLVQ</mol_seq> | |
84 </sequence> | |
85 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tetraodon_nigroviridis</property> | |
86 </clade> | |
87 <clade branch_length="0.072273"> | |
88 <name>ENSTRUG00000006177</name> | |
89 <taxonomy> | |
90 <id>31033</id> | |
91 <scientific_name>Takifugu rubripes</scientific_name> | |
92 </taxonomy> | |
93 <sequence> | |
94 <accession source="Ensembl">ENSTRUP00000015030</accession> | |
95 <name>brca2-201</name> | |
96 <location>scaffold_19:196046-199577</location> | |
97 <mol_seq is_aligned="0">QLARDMQDMRIRKKKRQTIRPLPGSLFQKKSSGVARIPFKAAVNGKPPARYTAKPLCGLGVPLNVLEITSETAESFRFSLQHFVKLESLIDKGGIQLADGGWLIPTNDGTAGKEEFYRALCDTPGVDPKLMSEEWVYNHYRWIVWKQASMERSFPEEMGSLCLTPEQVLLQLKYRYDIEVDHSRRPALRKIMEKDDTAAKTLVLCVCGVVFRGSSPKNKSFGDISTPGADPKVENPCAVVWLTDGWYSIKAQLDGPLTSMLHRGRLPVGGKLIIHGAQLVGSENACSPLEAPVSLMLKICANSSRPARWDSKLGFHRDPRPFLLPVSSLYSSGGPVGCVDIIILRSYPILWMERKPEGGTVFRSGRAEEKEARRYNIHKEKAMEILFDKIKAEFEKEEKGNRKPQCRRTINGQNITSLQDGEELYEAVGDDPAFLEAHLTEKQVEVLQNYKRLVMEKQQAELQDRYRRAVESAEDGVGGCPKRDVAPVWRLCIADSMGHSGRVYQLSLWRPPSELQALLKEGCRYKVYNLTTLDSKKQGGNATVQLTATKKTQFEHLQGSEEWLSKHFQPRVATNFVRLQDPEFNPLCSEVDLTGYVITIIDGQGFSPAFYLADGKQNFVKVRCFSSFAQSGLEDVIKPRVLLALSNLQLRGQSTSPTPVVYAGDLTVFSTNPKEVHLQESFSQLKTLVQGQENFFVHAEEKLSQLMSDGLSAIASPAGQIQTPASTVKRRGDMTDVSSNIMVINKTSKVTCQQPGRSHRFSTPINRNSTAHSSAERNPSTIKKRKALDYLSHIPSPPPLSCLSTLSSPSVKKIFIPPRRTEIPGTLKTVKTPNQKPSNTPVDDQWVNDEELAMIDTQAL</mol_seq> | |
98 </sequence> | |
99 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">takifugu_rubripes</property> | |
100 </clade> | |
101 </clade> | |
102 </clade> | |
103 <clade branch_length="0.045551"> | |
104 <confidence type="bootstrap">3</confidence> | |
105 <taxonomy> | |
106 <id>1489908</id> | |
107 <scientific_name>Ovalentaria</scientific_name> | |
108 </taxonomy> | |
109 <clade branch_length="0.320294"> | |
110 <confidence type="bootstrap">100</confidence> | |
111 <taxonomy> | |
112 <id>586240</id> | |
113 <scientific_name>Poeciliinae</scientific_name> | |
114 </taxonomy> | |
115 <clade branch_length="0.056524"> | |
116 <name>ENSPFOG00000001640</name> | |
117 <taxonomy> | |
118 <id>48698</id> | |
119 <scientific_name>Poecilia formosa</scientific_name> | |
120 </taxonomy> | |
121 <sequence> | |
122 <accession source="Ensembl">ENSPFOP00000001575</accession> | |
123 <name>brca2-201</name> | |
124 <location>KI519684.1:85746-101164</location> | |
125 <mol_seq is_aligned="0">MDSCIKNMYDAFKGEIWKELGPLDPNWFELLTAQASLKEGSVADNDELCANQEGHFKAPLEKTATESQLFSTPKVFRHSRIVSPDTEDDPSFTAAQEKETLPWMPTQSPCLFQVPKHCVSNLKCEGVQPQSEESFDLLDSPEKSPATYANHISESLGAQINPDISWTSSLNTPPALPSTLILSKTDESPCPVSVTADRNVVFVRKLFPSLSNSSLKTSRTCQGPVFPVTETCSESPLNQSESHQQQKVADALEGEVCIADAPKTFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDASKSDSAASNEEATADLDSGGLPPTPLVKTGDTAISQWSSLSLSEISSSAVGSNMTLPGDTDSVQPTRPTSKITDSGFTQKKRKFVYTITTTKSQACGQDFELQTADLSLKISESEQENGKSFVNIPDKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFALDFSQMTDLKTAENTQRNFSPAACLSVMKQAKQNGKPANFPNDYSCISKNRRIPTSNQPCSISEVTMMDSGFQSGVVDVTHMTSSSFGLPLLENVGQNRPTLSFKTGMHNFPSANGSGKSKFDVEVPVQRSGTGQAPEHGKEIELHMASISTEELWDKEETVGQSKCSQPQKTPLSLLPAEASGFKTASNKGIHISLANLEKAKLFLEATEDKKSSLDNSTKSYHGIIYKTNSIRETTTDASSNTNPPACAGKSFGNVSSQLTASEKADVTELCALLEEADSQFEFTQFRSGKKLPNHQDNHNPPHKEDKDLDPALLADIDFDDSFSSEGGKQSTVMMNDKVASVLENRTHGEKAKAINQCTGMSDLLKRETPLILPGAEDTEARCLENNKALIHSEAFRTAGGNVLHVSTKCLNKAKALFGDLERNLTDQKPSNQNGENAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKLEGVVCSNNNVGNRNDTKSGKNNGIDTIICENGFRKASGKGISISANYMQEADVFFKDCHVMEHKEGKKSFSNFKSPQVSISKKSVTGCTKLENVNTAVVSHHIKGLHLNEVERNTKFTAALKNEDGKSFPTSKPFAMLHPSKSTDSSAFEELCTGDGFCTAAGKNISVSSAAMKKAEFLLNQIHAPEEINKETNEKEKASKTKCLGDKISNVDTGGFQAVDGKKFAISSAPLKKATLLRESEKSEDEMCISSQQPSPKIPVIPVTNLWSGGFSAASGKPVILSSVALEKAQTLFSDISLNMVKVAESAPFKKDKKHQTEPENICSGFTTAGGANDQMSQEKFDDLVLAKAVQEEEALSADGVLESNNVMWESAGSKKEDETPYADQRFRTNTPVEAVKGCFRDTDKQEKHKENLLPQASCGFKTASGKKVEVSSEALKKAENLLGDCVGVMDTVNAALPESKAIDLPVRNDGFRSASGKPVALSSEALQKAKSLFSDIGFGAEDPDASQMIKSGKNQGGSNNTEKMSCGFTTARGEKVDVLQKNLQKAKVLFKELDDQVLSKAAQEEDAFFAGHDMDINKEMLENDLKGKVHMQRSRKACLAKCYTDDEKRVSISIPECSRDANKQVEQRENILLQASCGFQTASGKRVDVSSEARKKAETLFSEFEEIQDKTNAMSSQSKPSALSLRNCGFHSASGKPMAPSTEAVQKAKSLFGDITFSTEDSDFSQTVKAYGKQDSRSKTEKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLDLTKAMQDADHFFNQEEGWSIESNSEKSSEKTNTAPVNESGSIKGNMSKLRTNTGSICEEPGNGSIKAKQNDSGFQTASGKTVAVSAEALSRAKFLLSENKADEESTCVFAASGKPFSHEALQKAKTSTGGKSLPSGADSQSDDHIEEKSHFSICNLNTKSSNQISDNMQKNKSSDPKFQSLNLAGCTETQHKFLAQEALDCTKALLEDEVLVGQSLLTTSENLQLLDYQQLSEKSAEEDKGRKRRSAEDLTAQPPSKRRLLEEFDRTANNPRGSGLHPVKSGPNGIMDRGVFRYGVFLHPNITKPNRDAKSFVDTRLQNTIQMPHSEQGDGRSAACRMPTFVPPFFKNAKRDALNKPEARDRKKVPAFVPPFKKQRVVQQESSPTQQEDNKQHHSLCLETNSKTDAPLTKTTQSCEEVVTLVNTSNTKTINQSVLKVGSVSSTEMLHVDDKLSGSQDRTENIGLARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVARIPLKAAVNGNIPGRYSAQELYECGVHKHVPEITSQNAESFRFNLLQFVKQETLAEGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTCGVDPKLVSEQWVYNHYRWIVWKQASMEKSFPGTMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTPAKTLVLCICEIISKCQLLHAQSCSDTKMSQSAETKVETPVAFVRLTDGWYAIKAQLDEPLTAMLHKGRLAVGGKLIIHGAQLMGSQDGCSPLEAPDSLMLKICANSTRRARWDAKMGFHTDPRPFLLPISSLYSNGGAVGCVDIFILRSYPMQWMERKSDGGVVFRSVRAEEKEARRFNSHKQKAVELLFAKVQAEFEKEEEGSIKRQRRRQTVGKQDIGNLQEGEDLYEAVGDDPAYLEAHLSEQQLETLQAYRRSLMEKKQAELQDRYRRALDAEDNEMSCPKRDATPVWRLCVADSMTQSSCVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKRSSVETVQLTGTKKTQFQELQVSQEWVSSHFRQRISTDFVDLQNEEFKPLCGEVDLTGLVISVVDQQGPSPAFYLVDGKKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVVYAGDLTVFSTNPKEIHLQESLDQLKNVVQGQDHFFLTAEEKLAHLIKSDGSCSSSLQPQTPVAARRQDSKTNVAFLKPIKSLGSFTPVSSNLPAATSSTEKDPKTLKRKRALDYLSRVPSPPPISPLGSVVSPCVNKTFNPPRRSGPPSTLKPVQPAAPKATDSVVEDEWVNDEELAMIDTQALHVGNLF</mol_seq> | |
126 </sequence> | |
127 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">poecilia_formosa</property> | |
128 </clade> | |
129 <clade branch_length="0.045736"> | |
130 <name>ENSXMAG00000006974</name> | |
131 <taxonomy> | |
132 <id>8083</id> | |
133 <scientific_name>Xiphophorus maculatus</scientific_name> | |
134 </taxonomy> | |
135 <sequence> | |
136 <accession source="Ensembl">ENSXMAP00000006983</accession> | |
137 <name>brca2-201</name> | |
138 <location>JH556673.1:699224-714770</location> | |
139 <mol_seq is_aligned="0">MDSCIQNMYDAFKDEIWKELGPLDPNWFEVLTAQASLNEGNVADNDELCANQEGYFKVPLEKTAVESQLFSTPKVFRHCQIVSPDTEDDTSFTAAQEKEMLPWMPTQSPCLFQPPKLCVSNLKCEGVQPQTEASFDLLHSPEKSPASYANHISESLGAQINPDISWTSSFNTPRALPSTLILSKTDESPCPESVTADRKVVFVRKLFPSLSNSSLNTSRTSLGPVFPVTDTCSKSPLNQSESHQQQKVPDALEGDVCSADAPRSFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDTSKSDNAASSEEDLESGGLPSTTLVKTGDTAISQWSPLSLSEISSSAVGSNMTLPGYTDSVQPTRPTLKITDSGFTQKKRKFVYTITTTKSQACGQDFQTTDPSLKISESEQENGKPFVNTPDKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFAQDFSQMTDLKTGENTQRNFSPAACLSAMKQTKQNGKPANFPNDYSCISKNRCIPTSNQPFSISEVTMIDSGFQSGVADVTHMTSSSFGLPLLENVGQNQPKQSFKTGMHNFPSTNGSGKPKFDVEVPVQRSGTGQAPDHAKEIELHIASISTEELWDREETVGESKSSQPQTTPVSLLPADASGFKTASNKGIHISHANLEKAKRFFEATEDKKSSLDNSTKSYHGIIYKSNSICEKTTDTSSDSSLPACAGKSFGNVSSQLTASEKADVTELCSLLEEADSQFEFTQFKSTKKLPNHQDNHNPPQKEDKDLDPALADIDFDDSFSSEGGKHSTVMMNDKVASVLENRTHGETAKAINRCTGMSDLLKTETHLNSLSGTISEEREFLKLDEPNILPRAEDTETRYLENNKALIHSEAFRTAGGNVLHVSKKCLNKAKALFADLERNLTDQKLSDKQNGKNAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKLEGVVCSNKNVGNRNDTKSVKNNEIDTIICENGFRKASGKGISISANYMQEADAFFKDCHVMEHKEGKKSFSNFKSPQVSISKKSVTRCTELENVNTAMVSHHTKERRLNEVERNSKFTAALKNEDGKSFPTSKPFAMLHPSKSTDLSAFEELCAGDGFCTAAGKNISVSAAAMKKDESLLNQIHAPEEINKETNEKENASKTKCLGDELSNLDAGGFQVVNGKKFAISSAPLKKATLLRESDKSEDAICISSQQSSPKTPVIPVTNLWSGGFSAASGKPVVLSSVALEKTQTLVSDISLNMDKVAESAPVKKDKKHQTEPEKICSGFTTAGGANDQMSQEKFDDLILAKAVQEEDALSTDGVLESNNVMLESVGSKKEDEKPHADQRFRTHTPVEAVKGCFKDADKQEKHKENLLPQASCGFKTASGKKVEVSFEALKKAENLLGDCVGVMDRVNAALPESKAIDLPVRNDGFQSASGKPVALSSEALQKAKSLFSDIGFRAEDPDTSQMRKSGKNQDGSNNTEKMSCGFTTARGEKVDVLQKNLQKAKALFKELDDQVLSKAAQEEDAFFAGCDMDINKEMLENDLKDKVHMQRSRKASLAKCYTDDEMRVSISIPECSSNANKQVEQRENILPQASRGFQTASGKRVDVSSEALKKAETLFSEFEGIQDKTNAMSSQSQSSALSLRNCGFHSASGKPMASSTEAVQKAKSLFCDITSSMEDSDFSQTVKADGKQDSRSKTQKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLALTKAMQDTDPFFNQEEGWTMDSNSEKSSEQTNTAPVNESGSIKGNMSELRTNTGSICEEPESGSIKAKQNEGGFQTASGKTVAVSAEALSRAKLLLSENKVDEESTCVCATSGKPFSHEALQKAKTYFSSGVESLPSAADSRSDDHIEEKSHLSICNLNTKSCNQRSDIIQTNKSSDPKFQLLNLTGCTETQQKFLAQEALDCTKALLEDEVLVGQSLLTTSEDLQLLDDQHLNKKSAEEDKGRKRRRAEDLIAQPPSKRRLLEEFDRTAENSRGSGLHPVKSGPNGIMDRGVFRCGAFLHPNITKPNRDAKSFVHTRLQRTIQMPHSDQGDGRSVACRMPTFVPPFFKNSKRDALNKPEARDCKKVPAFVPPFKKQRVVHEESSPKQQEDNKQHHSLCLETNSKTDAPLTKTTQNCEEVVTLVNTPNTKMINQSVPLKVGSVSSTEMLHVDDKLSRSQDRTENIGLARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVARIPLKVAVNGNIPSRYSAQELYECGVHKYVPEITGENAESFRFNLLQFVKQEMLADGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTAGVDPKLISEQWVYNHYRWIVWKQASMEKSFPETMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTPAKTLVLCVCEIISKGQLLHAQICSDTKMSQSAKTKVETPVAVVRLTDGWYAIKAQLDEPLTAMLHKGQLAVGGKLIIHGAQLMGPQDGCSPLEAPDSLMLKIWSNSTRRARWDAKLGFHTDPRPFLLPVSCLYSNGGPIGCVDIVILRSYPMQWMERKSDGGVVFRSARAEEKEARRFNSHKQKAVELLFAKVQAEFEKEEEGSIKCQRRRQMVGKQDIGNLQEGEDLYEALGDDPAYLEAHLSEQQLESLQAYRRSLMEKKQAELQDRYWRALDAEDNEMSCPKRDVTPVWRLCIADSRIQSSCVVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKPSNVETVQLTGTKKTQFQELQVSQEWVSSHFRQRISTDFVNLQNEEFKPLCGEVDLTGLVISVVDQQGSSPAFYLVDGKKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVLYAGDLTVFSTNPKEIHLQESLDQLRNVVQGQDNFFLTAEEKLAHSIKSDGSCSSSLQPEMPVAARRQDSKTNVAFLKPIKSLGSFTPVSSNLPAATSSIEKDPKSLKRKRALDYLCRIPSPPPIFPLASVVSPCVKKTFNPPRRSGPPSTLKPATIKATDSLVEDEWVNDEELAMIDTQALHVGNLF</mol_seq> | |
140 </sequence> | |
141 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">xiphophorus_maculatus</property> | |
142 </clade> | |
143 </clade> | |
144 <clade branch_length="0.283168"> | |
145 <name>ENSONIG00000005522</name> | |
146 <taxonomy> | |
147 <id>8128</id> | |
148 <scientific_name>Oreochromis niloticus</scientific_name> | |
149 </taxonomy> | |
150 <sequence> | |
151 <accession source="Ensembl">ENSONIP00000006940</accession> | |
152 <name>brca2-201</name> | |
153 <location>GL831218.1:289993-303706</location> | |
154 <mol_seq is_aligned="0">MYETFKDEIWKELGPLDHNWFDILTAQTSANEGGSGSDQDELCANQEGHFKTPLDKTAVDSQLFSTPRVFRHSRIVSPEIEDGQSFSTTQENDTSPWTETQSPYLFQMSKKGVSDTKYEEIQPQSQDSFDPLDTPHKSPMSYAKHISESLGAQINPDISWTSSLNTPPPVPSTLILSKVDESPCPVSVSVDKSVVFVRKLFPSLSNPSRIVVAPPKNALSSTDAVLPEVVSSQTLLTQNEGIWQQTLRGANGDGKICSTVASAPDEFQNASSTFLANSSSALRKVKPDRIRWKQFKLSEHDCSSTDISKTNQSNEEHKADEEHSTIPSSPLAKNGSTAISQWSPLNLSEIPPCTAENNILTELQPDFDPRQLVRPPIKITDTGFIRKKRKFVYTVETLKPKVKENETDFQKMNASSGIPDTVKIEVFLFSTVTEKFSSFLLGPELSSKQSEDAPDEASCCSNERNAEEKQEKSTLENLPSSVQEKVQDLDMSQLHKDFAQDFSQISDSGRRTEGVAEDQNHFSPSACLLAMKKAKHQTKQASLHHDYNSISNTGHMSTTNQNYSTNEGTISDSGFQSAVADITHTASSCIVPCSENTGSKTDIHRTTPFPSTHRGNEKSQLKERQTIDSERECQLDMESTLTQLPSSLKGTDDGLNWIPQNGQVHGRLLEKTGVSLPPAHASGFKTASNKGIQISLANLEKARNLFEERDGDQPTKCNSATKHKNSQSNGSMKSTVSVSNQQTSVSERFEGISCHLTASQKADVTELCTLLEEADSQFEFTQFRGAEVKQPCQKTDKDLDPDFLADIDFDDSFSSDAEKHFAITAMPDKMTRENISAGDVLSSSENIPGRSNWLISTKQKSLHRAEHGEASKMEKPNPLMLSVAFKTAGGNALRVSKTCLSKARALFADLEINVSDLNRSHKQAAETGAKSKKMCNVDSETATDTKQPVSALKQARNMQDKDTTKSFEICKKDAIVNIEFENVNSGLSRPHPDDIEMKSVGCNTVLEFKNPVSFHETPFSTSKLLPCPASKSIDSSAISELSSGYGFCTASGKTVSVSADAMKKAKCLLNDTYTLEDTSKKISQKENALRTAQLTAQNKESIPKTSGFDTATGKGVSISSTAHKKAKCPLSESDKDFEDSVLTNAMQETVDCDIDVNNGGNIVHISGSDSDLGIRPDQRVTSNISVESANKQVKQKDSLPLKSGGFGPVSGKGVSISSEALNRATSLLGQCDEVNNKINVNQSHLKTSVYSPLPTSGGFHAASGKALTLSSEALQKAKTLFSDCREPSCSTHTEHKKLCKVWKWMRSGKPSCSKTPVPENGGFLAASGKPVALSSEALQKAKTLFSDIISSAESPHAKNEMQSGFKTASGKKVHVSQKDLLNAKHLLKDLDDSVFTKAMQMAEDCDMDLQTASGKGVTIASEALRKARSLLGECDEVEDKIVHDSLPQNGGFCAASGKPVALSSEALERAKALFGDIGISAEIPHAKNSHKKYDYGENTWKMQCSSKTVGEKDSGNGCTEVTNEHMKQKNTWPQQSVGFQTASGKGVAVSSEALKRAKTLLSECEGVEDKISITAPQGKISAHGPPFRSSGFLAAGVKPVALSSEAMQKAKALFSDISQSRDTPAVAHTRKNDKKIDAHNGEEMHCGFSTAGGVKVQVSKKSLLKATSLFKEFDDGECHDSLLFSTSPQDYEINKESSTKESKILKPNESSVLNFQSLNLTGCTETQQEFLAQEALDCTKALLEDEGLADHNLLMALENMPLQHNTSADGCQESEKRRGKRSVEETEMNGQPPLKRRLLEEFDRSLIDPKASTLHPVKSCSNGLMKDRGVFKYSTSLYPNITRPHRFQKTPQIQNSTMGDPRSKSAHYKTSAFVPPFVRNAKTETHKNMVLKDSIRTPSAFVPPFKKQRTIVQPTKKTQSDADGTAVAPAQSDDMNNQSLPVDFRSDSAGGETSGVDGTCSRSQADVYWNLQNTELAQDMQDMRIRKKKRQNIRPLPGSLYLKKTSGVPRIPLKAAVNGKIPGRYTPKKLYGYGVQKYVSDITSENAESFRFNLLQFIKREAFTDEGGVQLADGGWLVPSNDGTAGKEEFYRALCDTLGVDPKLISEAWVYNHYRWIVWKQASMEKSFPEIVGSRCLTPEQVLLQLKYRYDVEVDHSCRPALRKIMEKDDTAAKTLVLCVCEIISRGHSPKTQSHNDTKTPHSADAKVETSAALIWLTDGWYAIKAQLDEPLTAMVHKGRLAVGGKLIIHGAQLVGSQDACSPLEAPESLMLKICANSCRPARWDAKLGFHKDPRPFLLPISCLYSNGGPVGCVDIVVLRSYPMQWMERKPDGSVVFRSSRAEEKEARRYNSHKQKAMEILFAKIQSQFENEEKGNIKQQRRRKTISHQEIANLQDGEELYEAVGDDPAYLETHLSAQQLEALHTYRCSLMEKKQAELQDRYHRALEAEDNEMNCPKREVTPVWRLCIADSMELPGRVLVLVYQLNLWRPSSDLHSLLKEGCRFKVYNLTTSDGKKRSSIEAVQLTGTKKTQFQELQASHEWLSTYFQPRVCTNFVNLQNPDFEPLCGEIDLAGYVITVVDGKNTGSSPAFYLADEKLNFVKVRCFSSLSQTGLEDVVKPRVILALSNLQLRGQSMHPTPVVYAGDLTSFSTNPKEVHLQESFSQLKTLVQCQENFFLTAEEKLSELVRSNGLSSSSSPALQRQTPASLTDRRQDIKSSKPGRNLGSFTPVGRKSPTPTSSGEKDPKSLKRRRAQDYLSRIPSPPPLSHLGSVASPCVNKTFNPPRRSVTPSTLKTVQTPSHKPADSLGEDEWVNDEELAMIDTQALRVNLI</mol_seq> | |
155 </sequence> | |
156 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">oreochromis_niloticus</property> | |
157 </clade> | |
158 </clade> | |
159 </clade> | |
160 </clade> | |
161 <clade branch_length="0.178712"> | |
162 <confidence type="bootstrap">22</confidence> | |
163 <taxonomy> | |
164 <id>186626</id> | |
165 <scientific_name>Otophysa</scientific_name> | |
166 </taxonomy> | |
167 <clade branch_length="0.551859"> | |
168 <name>ENSDARG00000079015</name> | |
169 <taxonomy> | |
170 <id>7955</id> | |
171 <scientific_name>Danio rerio</scientific_name> | |
172 </taxonomy> | |
173 <sequence> | |
174 <accession source="Ensembl">ENSDARP00000099674</accession> | |
175 <name>brca2-001</name> | |
176 <location>15:32054010-32070540</location> | |
177 <mol_seq is_aligned="0">MFENFFHQIDRELGPLNPDWFEELNERASRDEGSAESSKAGENESIKAPETSALASQLFSTPRIFKQRHFPQSPDSIPNEKSQNEGANGELSAFPWTESSPCLFGSAKDSPKFDRSSEKPRDCFGLLDTPKRSLARSAKQISESLGAQINPDLSWTSSFNTPPSMTPTVILPTTEDRVASASILKDKESIFVRKLFPSLSKDSENATTLKQDVVTKSESIEADDLGEKTVCSPNESLDISSLWKQRVPNAIEDGDVRNTVQNVLDGAEDVLSIFFSNNTSALRKIKSKERIRKRITNSSEDVKSVFLTSEPEQKLKADTETKSPSKNDDSIEWTPLSLSETILTEGCSSTSLVDNNNTVAPSETNDGAIFKFTSESSQTCPQSVRLESSPEGTQCQKILLDKSSAFMLNKKPRKFVYQVSSSEMSTTLTGSKADLPKCLDQTLKEGPSVEELSVCLNKSSFTNENPIGDQTQPQAVEQLSSEHLDHGLDMTQLSKAFAEEFTQEIMAGGLLDMPVQSNQKVQVQPKAEPESKNKDGNHTDISNLADISVNSPNKSTSITTFEISHDSGCPTTFSDLDRTTASFADIGEYFPTFKTANNKFICIPTEAIVKAKASLDEAAGDGLAKTSNQTKPKHFHVTETMCKSVSRSIPAPRPPVGQSIPSNHASGVSVSDASKTDSPKGFKMNFSNCSLPQSDESDCKTSSKTIITVSDAGLQTESLLKEKLGRSSESSKPIHQKVDFERSAERHAVFDISSTQKPTAVDSSCDDLEENGTLTASQKADVTELCSLLEEANSQYEFTQYKSTNIGSHNRTTEKEWDPDILNDIDFDDSFSCDVVKGKHPSKTNASSVNTSDLISFRSDLKEKQNGTVVLSVTEESALVDGMRSILSKSSDNSHFHTFGFKTAKGKAISVSEKSLNKAKHFFEEDYKEATFTGVINQEHFKTESSVKTCISTENNNAQTKQDVRLSCGEVNAAHNMINWQEAGNAGTEPNCLRDKTDVVCVDSNIHFGFSTARGAKLKVSEKALEQARMFLNDVDSIGESQTPKLVPRSSGKHDVSMQSTRLQKTKDLCRGETSIKISQPDSGVANQISNGADITTFNSENVFQEQKSGNAAKEVCEKISPSETSMPQPQQGYGFQTASGKGVSVLPSALKKAKAIFKDCDSNIDNLQSTNMEERKTKLDVEIVKQTNALISNSKSVTFSDVEEFKTDLINNLDQEAPQKEVCELKGLQSEFSNLISSNGNCGFSTASGKKVSVSAEALQRAKDVLFESVDGFSCANVYKKTNQVVDIQLDSSSSGKHKGFCTAGGKKVAFSATGLQKAKNLFRGCEEESLTTEQNCKGLSNVLMLACNGVSLIPEPGNSSGNNVGFSTAGGRKMDISVTALQKANNLFKDCEEESLASRSLAHQGFTTASGKNVFVSEKALSEVRAVFAGCDETSFSLELKKLSVNNVGFSTAGGKKVTISDTSLQRTMNLFQDCEEESLGSRSLKHQGCKGFTTASGKNVTVSEKALSEVRAVFAGCDEASFSHEPKNISGNKIGFSTTVEKMTTALEMPNNNNNFKDCEEESLASRNLMHQACKGFTTASGKNVTVSETALNEVKAVFAGCDEATFDLEPKKSLGSNIGFSTAGGKKVTISSTALQRAQTLFKDCEEEKEVFESEKAPLPTKSFHARSEDIVDGNLKFDQTNKKNPRLSTASGKVVSVTKVSLEETSTFFREFDNQNTATDNQLLLRDSSKHYPQHKDRQTKATLHPKAARNEPAHLDLHSLDFNSCTDTQQIYFEQEAMACTKALLEDDDLIESAGLISSEDIDNKRRPSFSDVQTIESVDQNRKRKRQVDGSSVADSGQPPLKRQLLSEFDRTLHAKTSGLTPLKSCPNGTLKDRRVFKYNVHLKPYVTSPVLFPVNQQSNNIEEHCSTESVQKRCNSDHMGGVFNPPFQKNMNPPTSNSQDASKVSSGIVLSFNVVNQEENPNSKEMDQIMAISKSHCDRGKQNCNEKNQDSKSKSSSSVQSIPLKIGNFDEKDMIALQESLQLARDMQDMRLRKKKRQTIRPVPGSLYLAKTSGVSRKSLRDAVGCTCPSQYTQDELSQHGVHHKVLEITSENAESFRFDCSDYFTCEHLMESGALQLADGGWLVPDSKGTVGKEEFFSALCDTPGVDPKLISDVWVFNHYRWIIWKRASMERTFPNLIGGLCLTPEQVLLQLKFRYDVEVDHSQRSALRRIMERDDTPAKTLVLCVCGIVQTCQNPEKTMKDDKSPSAKMESCVIWLTDGWYSIKSLLDPPLSAMLNKGRLKIGDKIVTSGAELVGSQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDPRPIRLLLSSLYASGGLVSCVNLLVLRSYPTQWMEKKPNSVFIFRNDRAEDREARKHSNSKHKSLDLLISKIQTQFEKEMEGKKKKRAQRRTFSRHEIETLQDGDELYEAMEQDAAVETRLSHKQMEAVSKYRCCREEKRQAELQERVQKAVMEAQEAEGGCPNRDVTPVWKLSVIDASDMQSNCVYTLNIWRPTRELQGLLTEGHRYRAYHLASSEGKKRSGVAHIQLTATKKTLFQDIEVSPEWLHQHFRARECVRFRELQNPHFSSPCGEVDIVGYIVSIEGKQGHCPVLHLVDENFDLVTVRTYSSLEQLAVEELVKPRALVAICNLQVRVLSGPVPSLYAGEQALFSINPKESYLQEAMAHLKTFAQNYEQFFNLAEEKVSDVVPSGVLGSFQSPRTPGVQPFPKMNGTVTPQQKSSIFSPFTPLNRRTPASTSNSEVKDSKNLKRRRGLDYLSRIPSPPPLIPLKTRASPCINKTFNPPRKSVTPKPPQNECSPASRPPAGEEKWVHDEELAMIDTQALVDGLMND</mol_seq> | |
178 </sequence> | |
179 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">danio_rerio</property> | |
180 </clade> | |
181 <clade branch_length="0.462514"> | |
182 <name>ENSAMXG00000013027</name> | |
183 <taxonomy> | |
184 <id>7994</id> | |
185 <scientific_name>Astyanax mexicanus</scientific_name> | |
186 </taxonomy> | |
187 <sequence> | |
188 <accession source="Ensembl">ENSAMXP00000013440</accession> | |
189 <name>brca2-201</name> | |
190 <location>KB882257.1:1212119-1232402</location> | |
191 <mol_seq is_aligned="0">MIEDFFHQIETEELGPLSSDWFKELTAKASKDESFPGAVEHEASSRTEDGTFRAPQETPALESQMSSTPRLFRVRGPLSPDSVLGRSPNPAFQQQGMQTPLSTLPWTDSSPCLFGSAKESQRFEEDSEPLKKHDYFGLLDTPKSSLVQDSSAKRISESLGAQLHPDLSWSSNFNTPGAMSPTVILTKKDAQPSPVSFLKDKEVIIVRKLFPSLSKGTESTSEITSTAHNNASLTEENAQTKGPDESFDNVEGLWRQTVPDAINDSDVRDTVESVLDGAEDVLSIFFSNSSSALRRVKSKERTKKRVNGVSKDVKPAALATQHYTDRTGTATEAKSPPKNKDFSQWSPLSLSQVSDAKAKQDCTSDLANKHLNFESVNSDSGEDALKDSITQLGQFNTCEVEKQKSSPDSYPEKSQLRSSLLAASPALTFSRKPRKFVYQVQSPFPPTKENDLTGKHYREPFLTAENKKHIKDDPQTSDTVGDCLVHPKEPPVKQGNPGALNVDHGLDMTQLCNAFAEDFTQEIRSDAIKIDEVQTKAESVLHSDDGAEHLEFPANHKEASALAEESINLTSRSRMENTLSESLKHENGYPAVFNDVSGLSSSCNDGADKYLYSGFKTANNKLIHVPPEAVMKAKATFEDFVDLEEIRSDGLNTGSGTALNSSVVSTWSSERYSHALNKPEREPTGNLLHGSLDVASGCTSTSYLPKTNDSGFKTASNRSITISSVNLEKAKDIFKELEVENLYKTDICPSSNSAELEIQVMKNAKVPKLDIKRNVDGNYVLTASQKADVTELCSMLEDADSQYEFTQFRQAKPCSKSMESSRSEREWDPEILSGIDFDDSFNCDTERQLPRKWPVRPDLPTQNGPVSNSMKNGKETPKAELSLNDYRLSLRSDGREMAKTPAVQTNTSEGNEPVCVGFKTARGNSVRISEKNLTKARSLFADLEDCVGKIGLKSDHNSVTAQVTTKQTKHNQNSHNKDDVCKQICSTENPEDQDNPQGTKQNEKPDLLVDTRHCGFSTAGGKELKVSESSLLKAKKLLNKVSDQCEAVPSIKAPPNRVTTLKVANINLQPSVCSNSKVSENVFPHNLKMSCKSLTGNSKDQMFRNSESHHRLSEIEQQTTAKYQSTKSIQSSGFKMASGKGVSFSSSAIEKSRAIFRDLDSLIAEDGSNETKSMDENAKLHDEAERSQCKFANGFKMASGKGVSFSEGAFLKSKAFFKDCDADYPDHSQGKGDQSSVMDNCGFKALVGNTVHLPEIDSPNKEIVGLKDEATVLNKYVEKEFVPTSAPEILQFTSGCGFSTASGKMVSVSAEALQKAKAVLDDSSAASPCEIKADVSEEKNKKGVPKTDTYIPGRSLGFSTASGRKVAISDRALEKAKNLFASCEVEDLANNGITLNSAQTKPLGSEQTRCLGFSTASGKGVAVSEKTLKEAKAVFAGCEDILETADVHKPLKTGRVVEEKDKGSLNQSLTNREFQTCESANFRLSSGKCEEINNANKSNVKVEQFGFSTASGKGVSVSKSALKVAFEMFRDCDVQPITEEQHPVAQIDCPSSSDETRRHTTDTTTLSLSTQAIRDDSSLLNSHALSLNGCTMTQQKYLEQEAMACTKALLEDDFNEHSRSEPVEETVIRKCPTLAEQRSYEVIIGERKRTSDADLTGKALSNSSQPPLKRRLISEFDQISDGTRVCVPVKSSPNGTLTDRRVFKGNVHLKPNITHPSSIGSVSKKSKNIMDQNASKALDGEKRRPSNPKAVIFIPPFQKNIKPTRKVPTNYVSRDNAKVPTMFIPPVKKNPMSNVLQGNSIQSCTDSDCEKLEKEDTLEVKPNTAGNHDSEPEKKEKEVEEDQYGSFEESLELARDMQDMRIRKKKRQTIRPLPGSIYLAKTSGVTRISLREAVNNKCPLLHSQEKLYQYGVHCQVSQITAENAELFRFNFDDFFKREMFIDNTGVQLADGGWLIPDNRGTVGKEEFYKAMCDTPGVDPKLMSEAWVFNHYRWVVWKRACMERTFPEVMGGRCLTPEQVLLQLKLRYDTEVDNSRRSALKKIMERDDTPAKTLVLAVCGFAKSSSSPVNSEKAVGTPDSKTSESTAAIIWLTDGWYSIKALLDPPLSSMLQKGRLSIGGKVMIHGAELIGSQDACLPLEAPDSLMLKISANSTRRARWDSKLGFYKDPRPFSLPLSSLYSNGGVVGCVDVIVLRSYPTQWMEKRTGGVFVFRNERAEDREARRHSSAKQKTMELLFTRIQAQFEKEEEEKKKTRRRKRFRRCDIHSMQDGEELYEAMENDPAYVEAHLSAQQMEAVSSYRRVMADRRQVQLQERMQKSVQEAQESEGLCPNRDVTPVWKLTIADFSDLHSNCTYTLNIWRPSLELRSLLKEGCRYKAYYLSTSETKKRSGTANVQFTATKKTQFQDIEVCPEWLMANFPARQFTIFRDLQNSAFSSPCGEVDVVGYGISILDRQGASPVLYLVDDKFDFVSVRSFSSLVQLALENLVKPLTLLAISNLQLRELSGPVPRLYAGEQALFSVNPKEAHLQEAMAHLKTFVQSYENFFSVAEEKLSNLLPSGSVKPAQSPRTLGVSSVPKLNSRINVTPQPPKVHSPFTPVSRRAPTPTDQTTEPKDPKSLKRKRGIDFLSRVPSPPPLNPLNILTSPNVKKTFNPPRRSETNRPARRDPAPSRRSASLAPSVEEQWVNDEELAMINTQTLLD</mol_seq> | |
192 </sequence> | |
193 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">astyanax_mexicanus</property> | |
194 </clade> | |
195 </clade> | |
196 </clade> | |
197 <clade branch_length="0.210044"> | |
198 <name>ENSLOCG00000008205</name> | |
199 <taxonomy> | |
200 <id>7918</id> | |
201 <scientific_name>Lepisosteus oculatus</scientific_name> | |
202 </taxonomy> | |
203 <sequence> | |
204 <accession source="Ensembl">ENSLOCP00000009962</accession> | |
205 <name>brca2-201</name> | |
206 <location>LG3:13357730-13380925</location> | |
207 <mol_seq is_aligned="0">MIQNLDFARGMQEMRIRKKKRQTIRPLPGSLCLTKTSGVSRVSLRAAVGGKSPAQHTQQQLYVCGVNRCVLEISSENAESFRFSCRDHFGIEFFSAGNGVQLADGGCLIPDNKGTAGKEEFYRALCDTPGVDPKLISESWVYNHYRWIVWKRAAMERAFPLEMGSRCLTPEQVLLQLKYRYDLEIDNSQRSALRKIMERDDTPAKTLVLCVCRIVSMGSLQAHDTPGNKALPYAKAKTDGPVGVIEVTDGWYAIKALLDAPLTAILRKGRLAVGGKIVTHGADLIGCQDACSPLEAPEALMLKICANSTRLARWDTKLGFHRDPRPFHVPLSSLFSNGGRVGCVDVVVLRTYPIQWMEKKADGVFVFRGDRAEEREARRHNENKQKTMEALFAKIQSEFEKEQEGKKKSNRRQRFSHQEIQALQEGEELYEATESDPVCLEACLSEQQLMTLNNYRRALNERKQTKLQEEFQKAIRSAQDRENSCPERDVTPVWKLLVVDCKNLQNNTAYFLNIWRPSTEVCSLLKEGCRYKIYQLATSETKRRIGNAAVQLTAMKKTQFEQLQVPPELLCQLYASREAVSFRSLLSPRFQPVCGEVDLVGYVISITGKQGGAPVVYLVNENRDFVAVKCWVGLSQLALEDIVQPRALLAVSNVQARPSPAAAVPTAYAAELSVFSANPKETHLQAACTLLRSAAQGIECFFEAAEEKLSKLIKEDFPCQSLKDLSSIPKTPIMKPDVQRESSNLMISFILLLPSPQVPGRSPQQSLCAFEHLTPTCGKPPLHAGRSDDKGPKSLKRKRGLIYLSRIPSPPPLAPLRSPCVNKTFQPPRRCASPLAAARGKEECRSPGPAPEAGGEWVKDEELAQINTQDL</mol_seq> | |
208 </sequence> | |
209 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">lepisosteus_oculatus</property> | |
210 </clade> | |
211 </clade> | |
212 <clade branch_length="0.18077"> | |
213 <confidence type="bootstrap">1</confidence> | |
214 <taxonomy> | |
215 <id>8287</id> | |
216 <scientific_name>Sarcopterygii</scientific_name> | |
217 </taxonomy> | |
218 <clade branch_length="0.318609"> | |
219 <name>ENSLACG00000007788</name> | |
220 <taxonomy> | |
221 <id>7897</id> | |
222 <scientific_name>Latimeria chalumnae</scientific_name> | |
223 </taxonomy> | |
224 <sequence> | |
225 <accession source="Ensembl">ENSLACP00000008815</accession> | |
226 <name>BRCA2-201</name> | |
227 <location>JH127744.1:299190-332700</location> | |
228 <mol_seq is_aligned="0">MEWEAVESVKALMRDDELTDAGLDASKDSLNRACRRQSGGNFRARKRMRLEQVSADEPPVKRQLLAEFDRTVENGHKSLQKPLICTPNGTLKDRRKFMYSVPLKPVVCGPWSNNSKTGQQVTKPSITLPGRGVETFQPKNHIAPSPVYDPPSNRRGPVFAPPFHGATFRGLQKPSASHTSSKTAKTFVPPFKMKASASHTVHFSSKVINTCEKILENLVYLKPSLASCNIFQSLEEMTANLQCARDLQEMRLRKKQRQNIRPQPGSLYLAKTSGVARVSLKAATGNQCPSSYSTEQLYVHGVGKSTLKVRSENAESFQFSCSDYFGKDVLLAGNGLKLADGGWLIPSDKGMVGKEEFYRALCDTPGVAPKLISESWVYNHYRWIVWKLAAMEAAFPKEFGNRCLTPERVLLQLKYRYDIEVDKCRRSTVKKIMERDDTAAKTLVLCISKLISVEDRFKQTKNKNEKGAEEARKEAVAGVIETTDGWYGIKVLLDPPLTVLVQRGRLSVGCKIITHGAEIIGSQDACTPLEAPECLMLKISANSTRPACWSAKLGFHRDPRPFPLPLASLFNDGGLVGCVDVVVVRLYPIQWMEKKSDGIFVFRNDRAEEREAQRQVENQQRKMESLFAKIQTEFEQKYEAKSKRRGQKAQKFSKQEIQALQDGAELNEAIENSMDPGYFEACLREEQLKVLHGHRQMLNEKKQAEFQAEFKKALESAEQEGKSCCKRGVTPVWKLRIVDYRKPSAAEYILNIWRPLADLHSLLKEGNRYRIYQLLASQSKGRTTTADIQLTATKKTQYQQFQSFPELISELYSPRKAVKFNMLMDPTFRPAYAEVDLVGYTISIEGKPGVAPVVYLSDESHNFVAIKVWTALNQLAVEDIVKPFSLIAASNLQWRSDSRSIIPMLYAGDLSIFSSNPKEGHLQEAFNQRRTAIQENISGTYLPPEKKNLHQESYKSCQYNTLNVLMNGNIHTQSPVLSRVHMGTSCAFLFLLPSPYPESKHTSPLITMKAGVKSMTFPGSAKLMPQASENQELDTPKNRKKKAALDYLCRIPSPPALTPIRSFVSSSLQKAFHPPRSCVKLQSGENPVVPTVGNNAVLGIQSKKDEGPAAFNEEDSVADEELAMINTQAFLVGLRRDKRPSLLDKTASLKGHVPSERFLEEKLLSVLKEQASSNSERNATSLENKSCDKSRTCVKPCEHSNDSIAEETSEIIPGCHGGESAVENQSKNSSLCHKKLQQKKRRKYY</mol_seq> | |
229 </sequence> | |
230 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">latimeria_chalumnae</property> | |
231 </clade> | |
232 <clade branch_length="0.1098"> | |
233 <confidence type="bootstrap">1</confidence> | |
234 <taxonomy> | |
235 <id>32523</id> | |
236 <scientific_name>Tetrapoda</scientific_name> | |
237 </taxonomy> | |
238 <clade branch_length="0.110316"> | |
239 <confidence type="bootstrap">97</confidence> | |
240 <taxonomy> | |
241 <id>32524</id> | |
242 <scientific_name>Amniota</scientific_name> | |
243 </taxonomy> | |
244 <clade branch_length="0.104539"> | |
245 <confidence type="bootstrap">95</confidence> | |
246 <taxonomy> | |
247 <id>40674</id> | |
248 <scientific_name>Mammalia</scientific_name> | |
249 </taxonomy> | |
250 <clade branch_length="0.30595"> | |
251 <confidence type="bootstrap">100</confidence> | |
252 <confidence type="duplication_confidence_score">1.0000</confidence> | |
253 <taxonomy> | |
254 <id>9258</id> | |
255 <scientific_name>Ornithorhynchus anatinus</scientific_name> | |
256 </taxonomy> | |
257 <events> | |
258 <type>speciation_or_duplication</type> | |
259 <duplications>1</duplications> | |
260 </events> | |
261 <clade branch_length="0.007695"> | |
262 <name>ENSOANG00000015481</name> | |
263 <taxonomy> | |
264 <id>9258</id> | |
265 <scientific_name>Ornithorhynchus anatinus</scientific_name> | |
266 </taxonomy> | |
267 <sequence> | |
268 <accession source="Ensembl">ENSOANP00000024376</accession> | |
269 <location>Ultra336:825655-866744</location> | |
270 <mol_seq is_aligned="0">MPVEPKERPTFFEIFKARCSNSGDLGPISLNWFEELSLEAPPYNSTTSEDPECKTRSCEPNVFKTPQRKPSTYSQLASTPVIFKNQNVTLPADPSPMKGLDQCSIDPRKDDADNKDSQRSHSMTGTKLQQVNDVPSPFSSFLSESPTVLQRLFTTPQKNKPVICGSLFCTPKLTGFQTPRPISESLGVEVDPDMSWSSSLATPPTLSSTVLLAKDDQVSEAKFADGNTIVSKHKMLQKFLGHGESLRRNGMNTSSGTNVNSETGIMDHELEKILDGSFDDVNSCEDRIEHDSESAWNRSEPQNLEDEVYEAAKDVLPGEGDAHSINYASCKTKEDEGKHFNQIRAAECKDTEHLVENAECAVAHDTEFTSSVAKNKVQQPLESVNDRSSKEEVTSQASEWSQLNLSGFDGTWMEKTPPAHISSLAERLAAKAGGHAASDISLPSTLSPDRAQKVLNIDPLVNTRDDKQCSQPHQDCVLMLKDTTPETFPVASPFQSNRNLMLQKKQDSEKTSEEDFLKSNFLGTNPTDFKDPETPDTRLESHSSLRKDGSRCPPRPDPLAVDSDGNESWPTSDYNPVIWKSTGIISNLKKKTRRFIYAVNSDSSFQEGKTPEHQGSGSPHSSTSSCLEWKSSVDPQTYSRIDPGILFTDLLGASARKECLLPEAHGQILSSPSKVMCGIDCPPPENSFSRSTIVCRELEYNEAKTNDEPHSATSFEACDGSEFQQSHFNDPSKRQRVASIKDKAKAAAGLLARKHSEVEFGKIEHTVHSPEANRTSDVNPSTLGLTPSSKDPPLQSSDIIPRAKESFCKKNLESEFRKNHKVSCVENKASPQLNDIAANNSTGKETEHQTGFSVRILQQAQQRLSDKFTESLRDCQEAISEVTAVKPNYGLNKPLHKDTFLYKALASDTDVMDNTGEICESSYSYLEEPVSESNTSAIYAEMEHKEETQELITQNSFSSKEAPEHFQKGSCSLNQALKMSGEVTLPNKDLNCRNSSSLVLKSKGNNGGNPKKWTRTFEHVLNQSVGCGFQTASNKEIKLSENNLKRSKMLFKDIEEQYPNSIFYAESANTSTTVQEKKLNQNSSRAFDSKPSSTKPNDFLDNISVVNSENTILPLQPLCIQPDLELKHCLTASQKAEITELSTILEETGSQFEFTQFKHQGSTVESNVIALGKNDEDELVNSNNTSDELKGVTFDDSFIPRVRGGNGKFPKQVETSVSSEDKVNIKQQTLYFQKSNSDRNTFADVLGIKENEFRGFHSALGRKMVVSDVALQKAAKLFSDIEEMSDEATSSEAKSKICSSESHISIVSAFETANDKNDKDIEEKGTKSLYKSPTNVENIVSVAKTENWGENMQNKERNDFPFQRPPEISNLRKSTDCNRSEGKYCVHKEGSGVSSIDQHNAVLNMSNQFLNQENTQADEGLSDLTCLEAVKAEEMSSLNISDKVRDVTCNPEWKQMEGTLSSREPQSFQTARGKKILVSTESLKKAHLLFREECPEEESDVFLFPLHQMENRVTNEKMEKYVKEKITTKQSKTPEEAIPGAPENQVMTFQREPNLESERLGEHSIMDFKTASGKNVKISKESLAKVKDIFAEENPTGKQKMSTLQHPETGTSRKRENIPEGFAHTSEALGFPGRIGEEMPDCEDDSNIEKNLFSQNKEELPELLTERGLCNQTIALKTPSTVPLEVKVSGDMEKGTEKNCSASYPELFIGKAKTASALEFCTGHGERISVSEASLFKARKWLSEGDLEGAPRKTDASESMLFSSAADKNMHFKVSPSKNILTLKMNRTDSHERQGSVYPMDGYISKASFSNSKEYAANICNDSVVVNYTAGRKGSTDSQLAFHNLTDANKKYSPVMNEDTNVQSLPDPSEMCSAQNVINIKTSTGKTEFRSTHFELKPATFSPAKTIPISPEAVIKPKEISPTTSNVRLNIGTESEICPTEIVAGNIRTFGSPENITFPHLPDNAAMYIDTAKKEENIADKQALKKTQSLFANTSFEVDLQKSHCQANFRTYDFCQAELGKLPPLGALTRMSQAFNTASGKPVRVSDASLKKAKQVFSAIENHSERLPFVTSFKDTESHPEKVMDESNPNRSEKPQVLQKHSSGFRTGSGKQVRISESALERAKGVLMEFDELDKDDNVAYFSKPNQDVLKASAFHSRVDGDQAEGCILSFPTEKDLSKKLNYSNYYVERKSSEDSRHIQVSRNRDEQLSLVETGQCDNGIAIFKSENLLKIDDGSTLSSRPVQARIDVFPPCSKATESALETEAASSTKAFMEDELMGLGVARPVKQSLFTYPNDEGCIMLHPRTGKRRFEEHDSHGEPSIKRKLLPEFDKTMGKEKSSLKASRSTPEGTMKDRRMCTNHVPLKPVSCGPFSLTKERQEMRNPNLTAPNQEFLSKPNAFQHHTLGRSSSNSPVFRAPFYGVSANKNEKMNPQNISGKPAKVFVPPFKTKAHACTDKQDVSKKCQLQMNKQVNKDGEQKSSLSRHDPGVSGSNTVDAKNDQSHTDSANQETIQAVAEHGEEHSVDTITNLQRARELQEMRIEKKQRQRILPQMGRLYLAKTSGHPRLSLKTAVEGRAPSKYSTKELYMCGVSKHCLRVNSKNAESFQFCSQDCFSRECWSAGNGVQLADGGWLIPTNAGKAGKEEFYRALCDTPGVDSKLISRPWVFNHYRWIIWKLAAMEVTFPKQFANRCLTPERVLLQLKYRYDVEIDKSQRSAIKKITERDDSAAKTLVLCISEIISPSTSAAATASKTNNSVLTQKEGAVIHVTDGWYSLRALLDPPLLVLLQAGKLMVGQKIVLFGAELVGPSNACTPLEAPEDLMLKISANSTRPARWYAKLGFQPDPRPFPLSLSSLFKDGGNVGCVDVVIQRAYPTQWMEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQEDAARRQDVKSRVLTRKQVRALQDGAELYEAVKSVPDPAYIEAYFSKEQLKALSSHRQMLSDQKQAQIEMEFRKALELAEEGEEGWARRDVTAIWKLRVVDYRKPGKDAAMLNIWRPLSDMYSLLKEGSRYRIYHTAPSQSKSRSGRASVQLTATKKTQYQLLPASHEILFRIYRPREVLQFGKLLDPALWPPWTEMDLVGFVISVTKRAGLAPLVYLSDECHNLLAIKFWTDLNEDIVKPHALIAASNLQWKSETTSGICTLCAGELSAISANPKEIHFQETFNKLKSTIQDVIQFCSHAENKLRNVLLLSDPSWSHRAADGSLEPPTPHGRFDLVSLPQLQVTVTYSFIQMPPKSEAGPSPAAAASALGSGTLTPQPGWRGAAGPAAPKTCKKRKALEYLSRIPSPPPVSPLCASVSPALKKAFQPPRCCGIRPSTPVQRPSSPREGSAQSPPPLEGDLVTDEELASINTQALLAGLAEDNTVTAGPPGLKADAPDSPLEKGRLSPNCSAGADLAGNHADEARGMATSQQKLRR</mol_seq> | |
271 </sequence> | |
272 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ornithorhynchus_anatinus</property> | |
273 </clade> | |
274 <clade branch_length="0.039107"> | |
275 <name>ENSOANG00000030391</name> | |
276 <taxonomy> | |
277 <id>9258</id> | |
278 <scientific_name>Ornithorhynchus anatinus</scientific_name> | |
279 </taxonomy> | |
280 <sequence> | |
281 <accession source="Ensembl">ENSOANP00000032170</accession> | |
282 <location>Contig35657:828-3008</location> | |
283 <mol_seq is_aligned="0">MEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQEDAARRQDVKSRVLTRKQVRALQDGAELYEAVKSVPDPAYIEVSGSIR</mol_seq> | |
284 </sequence> | |
285 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ornithorhynchus_anatinus</property> | |
286 </clade> | |
287 </clade> | |
288 <clade branch_length="0.044879"> | |
289 <confidence type="bootstrap">98</confidence> | |
290 <taxonomy> | |
291 <id>32525</id> | |
292 <scientific_name>Theria</scientific_name> | |
293 </taxonomy> | |
294 <clade branch_length="0.153103"> | |
295 <confidence type="bootstrap">86</confidence> | |
296 <taxonomy> | |
297 <id>9263</id> | |
298 <scientific_name>Marsupialia</scientific_name> | |
299 </taxonomy> | |
300 <clade branch_length="0.08857"> | |
301 <name>ENSMEUG00000010691</name> | |
302 <taxonomy> | |
303 <id>9315</id> | |
304 <scientific_name>Macropus eugenii</scientific_name> | |
305 </taxonomy> | |
306 <sequence> | |
307 <accession source="Ensembl">ENSMEUP00000009812</accession> | |
308 <name>BRCA2-201</name> | |
309 <location>GeneScaffold_5009:8209-57002</location> | |
310 <mol_seq is_aligned="0">KDNSQKSRYIMKTKLGQANDVTSPPFSACLSESPVVLRGPYRTPQREKPVAYGNLFYTPKLMKVNTSKHISESLGAEVDPEMSWSSSLATPPTLSSTVLIVRDGQTSEARIPNDTTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKMIDDSFGDGNNFEDHDGKMMRNMPNVMEDEVCDPDIDIPIEDDALFSFPGYKVGSLRKVKLDKTRKKYFKIKTNECEETKNMKDKYSSTSEAELTDPSISDITKNEIQTHVENVNEELLKDDVPCLATQWSQLNLSDLDVTQIEKTPLPHTSFCDQIQEKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLDDLSSKKDLNLSHSLTASQKAEITELSTILEETGSQFEFTQFQKQNPIVQTLEISESQMSSLNTYEVQNTVELDVILEKNEIDNNRFEVVINVKQKTVGLPKSNSGQVIFTDSFTENKVEFKGFCSALGRKMNISNEALQKAMKLFSDIEEISKETSAFKNDSLDRNHKSNVVPTFKIAKYNNKILNKDVKYVHKPQNNVENNTDILEENTLNCSREPENKKECTSSHKDNGKLKESIVPNSDNTQREINGLSLIGQQNMHLRKSNQFIKQENYQIKEEFLDLTCLGEAVKDKEVYLYKEQLVSNQKEPKIRENENSCDLQHFQTANGKNIMVSKESFNKVTHLFAEECSVKELSNFSFDFESNVLTMEPSGKKEKNLVESETEEMTLGATKSQLISIQQGPKIENKKLKEHGMVGFHTASGKKVIISKESLAKVKHFFVEENLENDVTSIKNLETELFKEREKVNEKHGQAYEMVKSNNAQVWEEMQSYQGDNGKVLISVTTADLPKITDYSPLKPSNSVLFEEKLSENKEAKKIVYCHTKQSTGLPVEVSALGFYTGHGKSVFLSETSLLAARKCIRERFKSEKADSDVDAKKLVPLNTSNDTSSVEDKNCISDKQDSANLNNSMSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMKRKLLHEFDRVVENQEKSLPSKSSDGTMKDRRMFMHHISLKPVTCDPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYMYGVSKQCLRINSKNSESFKFHSQDYFSKEYLLDGKGIQLADGGWLIPSDKGKLGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTSTTANSKNSNVDTKRESAVIEVTDGWYAVKALLDIPLSVLLHRGKLTVGQKIITHGAELIGSQEACPPLEAPASLMLKLSANSTRPARWYAKLGFFSDPRPFPLPLSSLFGEGGNVGCVDVVVQRVYPTQWMEKTASGLYIFRNERAEEEALKHAECQQKKLEVLLTKVQQFKHEENSARQYGLSRILTRHQVRALQDGADLYEAVKNAPDPAYIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPLVYLSDEYYNLLAVKFWIDLNEDIIKLHTLIAASNLQWKAESRSGIPTLFAGEFSSFSASPKESHFQEIFNKLKSSVENINQFCNDAESKLIHLINTYNSKQPNAVKEYNLDSPSPQARLGLVRVISTSHSEPSHHCPEGDSGLITSSVKITPTSDCKGDRKMDDARICKKRRSLDFFSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGNNYSKPIKKSTLNSSQVTTLKTFSGTNMVENDLIADEELALINTQALLSNSPEKLIMDGFTSREPSGSGEHWVLKKDCPKLIEVENISQTSTEETRITRDKNEI</mol_seq> | |
311 </sequence> | |
312 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">macropus_eugenii</property> | |
313 </clade> | |
314 <clade branch_length="0.013978"> | |
315 <confidence type="bootstrap">86</confidence> | |
316 <taxonomy> | |
317 <id>9263</id> | |
318 <scientific_name>Marsupialia</scientific_name> | |
319 </taxonomy> | |
320 <clade branch_length="0.098879"> | |
321 <name>ENSSHAG00000010421</name> | |
322 <taxonomy> | |
323 <id>9305</id> | |
324 <scientific_name>Sarcophilus harrisii</scientific_name> | |
325 </taxonomy> | |
326 <sequence> | |
327 <accession source="Ensembl">ENSSHAP00000012162</accession> | |
328 <name>BRCA2-201</name> | |
329 <location>GL849705.1:683545-750243</location> | |
330 <mol_seq is_aligned="0">CFLTDLGPISLNWFEELTSEAPPHNYEISEDHGSKTEIIELNSFKTPQRKPFTYNQLASTPLIFKEQNVNFSLYSSPLRGPDHCKLDLGKDNAVDKELRKSHCLIKTKLGQANDATSPLLSACLSESPVVLRGTYRTPQREKPVAYGNLFYTPKLMKVNTSKHISESLGAEVDPDMSWTSSLATPPTLSSTVLIVRDGQTSGARTPNDTTIMLQKSLSQHGESPKRLDRTTSSVPNIENTHAESSVTSQELEKMINDSFGDGNSFEDLDGKMMKNIPNVMEDEMCGPVIDTPDDDASYSFPDYKIGSLRKVKLDKTRKKYFKMKTNECEETERLNKDRYSNISETELEYCYPSISKVTKNEIQKPIENINEELLKDDVPSSATEWSQLNLSGLNVTQIEKTPLPHLSFCDEDSRERSANSNSECSNLITLKKLEISTCEEDEGKITIPQKETVLLLKKSSPEISPLKSLSQNRKSSTFEMGQTSEKTISVDYSSFCTVNTNITTESKILGNKLENPNSSVNDIVCSGEHSFLYPNTDDKRHCPTITKCNSSSLNSIGIISHFKKKTKKFIYVVNDDSSCQDENIQKSQEIDSMNCSESSHLEMSSSGMHPEFTDAVSDFLDSSVKRKCLQFNPEEETVSLTGCDKTVLEEYFNESSFPQNEVTSQGVDFKEVKIKKGDLESTVTEAEKKDHNNASKNPIVSNIKERALAKKYTEIELGNIGQNIHLTTKNRTLNGSTNSIINTLTQLPQDPPEFSVVTDEEKEPLCKMKQKLRFRRNSDSTFVTNKVNSEFPNSHFKKNQETDILNQISGESQQMSSEKCKEISSISLGTQVNRNTDLFVSLRDQEKTILLTGKTALETYPKEHLPLNKSNFLFQTTEKKHMQIMDSSEELETNFCYLGEPISEKSTEIDCKQTVQELCTEDSFLLKVIPEFTGDSQNKNQSPKLAYEYTAPCKNLYSKRTIDANVKSKTNEDNYLGKWTGNFDPDLNKNFGSGFKTASNKEIILSDNNINKGKLFFKDIEQHDNNCSSVEIMNTSVAENVKIDLDTKNHIKNSTSGWNSEASHAISKDIQDNIFVINKKDTNVTLENLALKKDLDLNHSLTASQKAEITELSTILEETGSQFEFTQFKKQSPTIQILEISTNKTGNQLDNLNTYDVQRTFELDGYFGAKNEISNSRTPDLNVNSEMVINIQQETASLSRQVNSTDTFTENEMEFKGFCSALGRKMTVSNEALQKALKLFSDIEEIGEEVPLQNFRNSSLERSHKSNIVPTFKIANHNNNEDFKGKEAKCVPKPQNNIEDYTDIFVEEKVVNSSRDPENIKSSCPLSISSHEDNCTFKRSVPNSNNGLSLNGQQNIHLKMSNQLMKQENYQIKEELLDLTCLGETVKDEEMFTLNISQVEQLISNQKKQKIRENESLHDLQHFQTASGRNIMVSKESFNKVAHLFAKECSVEELNDFSFPSISKMPNVAHNKLTEPSVKEEQNLLESETEEMPFGITKNQLLSIQQEPKIENKKCKDHSMVGFHTASGKKVTISKESLAKVKHFFVEENLKNDVTNIKNIETEFFQEREKANDGQACEMVELNNAQVWEEMPSYQNDDKKILVPFTTADLSKKLDSALSNESSNDILFERKLSENKKSKENCLLSDTKKSTGLPVEISGLGFYTGHGKRISVSETSLLEARKWLRDRDLQDVGGKTEASDMFVSSVDEAIYLKGDPDVQKEKLVPLNALYKTSSVEDDKNCISEEQDSVNLSNNVSDIKHDLKHDPKRSGFYQSDNADFFLEHISDKGMSYLKARPPTFTTASGKTVHISNEAVQKAREMFINDCDKVLKPNIETKLENNEMEVVKYFSETLGNKKDISLKFDAKKRNISTTDIFISNTKCSNLAQLESMSTSTGLEVNSELSHHKINSQTSDLSKSMGRMPKCSSSVGIFCTANGKPVQVSDNSLKKARQVFSEIESNSEQLLSMVPFKNSESHMETLTKEENTTLHAKTNLLSQKKDYLSDMVNSHNNSGFSTASGKQVLISENALKKVKNMLVEFDLMKNESLEQLPEFTQNVTPKVLSPIHCIDGSKNPENVVNSKNEETCNKEFNLSNNCDVETNYLENCTITKVSCNQFKQDEMQTPLETNLMPDQDFSFLKKKQGGPKNVNIEGDVTLNDFLVKESLQVCVSDSKAPENFLEREAMEIANAFMQDDELTDSELPHNARQNFITYKNKEKCMQLNSRFGKRRMEKGASYGEPPIKRKLLHEFDRVVENQEKSLKPSKSSPDGTMKDRRMFMHHIPLKPLICDPFSTTKERQEMRHPNFTAPDQGFTSKSPFFKRQTLGNSSYKSFLGSPLYKIFSTNDGKIQPNTVVNKPSKVFVPPFKTKSNSFTDEQYVSKRLKLKVKDHIQENEKQKYIDGHNTRDSENNENYLTDKDNYNQATTDVFEEFGDSTLVEMNKNLQNARELQDMRIKKKQTQQIYPQAGSLYLTKTSTIPRISLKVAVEGRVPSTYSSKQLYMYGVSKQCSRINSKNAESFQFHSQDYFSKEYLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPERVLLQLKYRYDIEIDKSRRSAIKKIMERDETAAKTLVLCVSEIISSGTNMSIAANNKNSKVDTKKESAVIEVTDGWYAIKALLDIPLLALLHRGKLTVGQKIITHGAELIGSQEACTPFEAPPSLMLKLSANSTRPACWYTKLGFFSDPRPFPLPLSSLFSEGGSVGCVDIVVQRVYPTQWMEKTLSGLYIFRNERAEEKEALKHAECQQKKLEALLTKIQAEFEKHEEENSATQHGLSRILTRQQVRALQDGADLYEAVKNAPDPAYIESQGCFSKEQLRALNNHRQMLNDKKQAQLQSEFRKAVAAAEMEEQGLSKRDVTMVWKLRVINYGKQEKDSVILSIWRPLSDIYSLLKEGNRYRIYHLAASPSKSKSDSTHIRLTATKKTQYQQLPVSHETLFQVYQPREALPLSKLVDPSFQPSFAEVDIVGFVIFITKKPGIAPLVYLSDEYYNVLAIKFWIDLNEDVIKLNTLIAASNLQWRTESRSGIPTLFAGEFSSFSASPKESHFQEAFSKLKSSVENIDLFCNDAESKLTHLHNIHNSKQPNTVKEYNLDSPSPQAKLGLEHVITTSHSEPSHLCPEGNSGLTTSSDKITPTSDCRGNRKMDDPKICKKRRSLDFFSRLPLPPPISPICTFVSPAAQKAFQPPRSCGNNYSSKPNKKNTLNSPPMTTLKTLSGTNMVENDLIADEELALINTQALLSNSSE</mol_seq> | |
331 </sequence> | |
332 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sarcophilus_harrisii</property> | |
333 </clade> | |
334 <clade branch_length="0.091526"> | |
335 <name>ENSMODG00000009516</name> | |
336 <taxonomy> | |
337 <id>13616</id> | |
338 <scientific_name>Monodelphis domestica</scientific_name> | |
339 </taxonomy> | |
340 <sequence> | |
341 <accession source="Ensembl">ENSMODP00000033276</accession> | |
342 <name>BRCA2-201</name> | |
343 <location>4:304116271-304197558</location> | |
344 <mol_seq is_aligned="0">MSAGYQGKTTFFEVFKTRCSESDLGPISLNWFEELTSEAPPYNYEISEDPGSKTEITEVNYFKTPQRKPFTYNQLASTPLIFKEQNVNCSLNSSPLSGPDHCKLDLGKDTAMDKELRKSHCVLKTKLGQANDVTSPPLSTCLSESPAVLRGAYRTPQREKPVAYGNLLYTPKLMKVNTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDGQTPGARTPDDTTIMLQKYLSQHGERPKRLDRSTSSVPNIENIHAEGYGTSQELEKMIDDSFDDGNNFKDHGGKMINMPNIMEEEICDPIINTPVEDDASFNFTGYIVGNLRKVKCDKTRKKYSKTKTNEYEDTKNLSKKENYSSASETELEYCYPLISKAENNEIQKSIKNVNEEMLEDDVPSSATQWSQLNLSGLDVTQIEKTPLPHISFCVQNSEERPANESNECSSLSTLKTVEIAAYKEDEEKITTPNKGSVMLLKQISPEISPPNAISQDRKNSKFKMRQTSEETVSMDFLECSSLCTVNASITTEAKVFENKLENPKSSLDDIICPEKHGLLSPNTDGKGSCATVSKRNSAPLNSTGIISHFKKRTKKFIYVVNNDSSYQGEKIQKTQEFGSVNCSASSHLELNSFEEHHEFTNAISDFLDSSIRRKCSQFDPKEETAPLTECDKTMMEEYFHESRFPHNEVTSQDLGFREVEMNKGELESDITETDNQSQSQERSYNDFSKRQRDSHVKECILTATCLSPRKHTEIELGNIAENSHFTTKNSTLHDSVDTSINSLTQLPQDPQELSVVIYGKKEPLCKVKQKLRFRRNSDSTFITNKVRSELKESFGNKGNQETEVLNEILGDDRELSSEKCKEMTSVSLGAQVNKNAGLFVSLRDQENTNLITEKTAIELYSEEDLHFNEENFIFQTIDKKNIRVTDSSEEFFATSFCYLEESIPKNSTEIDYKQTVQELFMEDSFSSEMVPVFTRDSQDKNQNSKLACECISQSKSSYSKSTIDTNMKPKRNEENYLGKWAQNFDPDSNKSFGCGFKTASNKEIILSEHNIKKGKLFFKDIEQYYNSSSVEVVNSSISVAAENIKTDSDSKKQEKNSFPAWKSEPSHIISKDVQSNIFVLNEKEIDPALEDLCSEKDLDLNHSLTASQKAEITELSTILEETGSQFEFTQFRKQSSTVQTLDISTNKADELGNLNTFELQMGVELGDHFGAEYETDNNRSPVQVDLNVNSEVVINVKQRTVYLPKSNSEQGASTDIFTESEFKGFCSALGRKMNVSNEALQKAMKLFSDIEEIGEGTPLQNLRNGPLDRSQKSNIVPAFKIANYANNSKDFKGKDAKPQSNAENNTGIFVEENMLNCSRDPENKQSSSPLFISSHKDSSKLKGSVEPDSDNSQREKNDLSSIDQQNYPKMSIQLIRQENYPVKGGLLDLNCLGKAVKDEKIFASNVSGIEELVSNQEEQKMRENENSSHLQSFQTASGRNIMVSKDSFSKVAHLFAEECSVKELNDFSFPFTLKMLNTALNKSVESSGKKSENLAENEIEEMAVATKKELMPIQKGPKIENKKWKEYNMVGFHTASGKEVTISKESLTKVKHFFVEESLENDVTNIKNLETEFLNEREKINEKLVQAYEMVKLNNSQVCEEMQSFQDNDEKVLPVRTTDLPKITDSILSNEPSNNVLFEEKLSEIKENCILSDAKQSTGLPVEMSGLGFYTGHGKSVPVSETSLLEARKWLKEIDLGGKTKASGMFVSSVDVKEDSDIHVKKSVPLYTSNNTSSIDDKNISDKQDAVFLSNSMSSIKHNLKHDTEGSDFCHSDDADFFSEHISDKVMSCLKAQPPAFTTASGKTVHISNEAVQKAREMFINNGDKFLKPNIENKSENNQMKNVKDPSKILENKDISPKSFDGKKRNLSVNEGSFSNKIYSKKAQLENISAGIALEMDSEVSHCQINSKTSDLYKSTIGKQPKGSSSVGIFCTANGKPVQVSDNSLKKARQVFSEIANDSEQLLSIKGSENHPETLIGEENAMLYAKINLPAQKDYLSNMQNLYNNSGFNTASGKQVLISESALQKVKGMLVEFDLMRNECLESIQDVTPKGLSPVLCIEGSETPKHIVNSKSKEICNKELHFSNNCNVEISSSENSRIIEVSCAQFKQDMIHPLLETKLTPAKEILFLKKGQVGLKDVDMESSEAIDGLPVKRNLQVSSPNSKAQETSMEREAVEIAKAFMQDDEFTDSELPHNAKQSFFTYKNNEERILTNSRFGKRRMEERASYGEPPIKRKLLYEFDRAVENQAKSLKPSKSSPDGTMKDRRKLMHHISLKPVTCDPFSTAKEWRQMRYPNFTAPGQELTSKYHFLKHQTLENSSHNLLLQSPSYKDSSTDNGKVKSISVRGKPAKVFVPPFKTNSNSSTATDDEFIRKRLKVKVKEYTPENEKQKYGDAHNSGDSENNENYLSDKDNSNQATTDIFKECGNLHLEMIENLQHAREMQDMRIKKKQTQKIHPQAGSLYLRKTSTLPRSSLRVVVEGKVPSTYSSKQLYMYGITKQCLRINSKNSESFKFHSEDYFSKEHLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPEWVLLQLKYRYDIEIDESRRSAIKKIMERDETPAKTLVLCVSEIISSGTNISITANSKNNSVETKKESAVIEVTDGWYAIKALLDSSLLAILQKGKLTTGQKIITHGAELIGSQEACTPLEAPESLMLKLSANSTRPARWYAKLGFFSDPRPFPLPLSSLFSEGGNVGCVDIVVQRVYPTQWMEKTLSGSYIFRNERAEEKEALKYAECQQKKLEALLTKIQAEFEKHEENSATQHRQSHILTRQQVRALQDGADLYEAVKNAPDPAYVEGCFSKEQLRTLNHHRQILNDKKQEQLQAEFRKAIAAAELEEHGLAKRDVTTVWKLRVVNYKKHEKDSVILSIWRPLSDIYALLKEGNRYRIYNLATSPSKSKSDRAHIRLTATKKTQYQQLPVSHEALSQVYQPREAVPLDKLMEPSFRPLCAEVDVVGVVISVTKKPGVAPLVYLSDEYYNLLAVKFWIDLNEDVIKLHTLIAASNLQWKTESRAGIPMLFAGEFSVFSASPKQSHFQERFNKLKNSVENIDLFCDGAEKKLSHLLDTHNSKQPNAVREYNLDSPQAKLGLGPMISPFHRERNHHCPEGNSGATISSVKISPTSDCRGDRKMDDPKICKKRRSLDFLSRLPLPPPISPIRTFVSPAAQKAFQPPRSCGNKYNVPVKKNTSNSPQMTIKTLSGTTMAENDLIADEELALINTQALLPNSSE</mol_seq> | |
345 </sequence> | |
346 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">monodelphis_domestica</property> | |
347 </clade> | |
348 </clade> | |
349 </clade> | |
350 <clade branch_length="0.125005"> | |
351 <confidence type="bootstrap">87</confidence> | |
352 <taxonomy> | |
353 <id>9347</id> | |
354 <scientific_name>Eutheria</scientific_name> | |
355 </taxonomy> | |
356 <clade branch_length="0.005552"> | |
357 <confidence type="bootstrap">6</confidence> | |
358 <taxonomy> | |
359 <id>9347</id> | |
360 <scientific_name>Eutheria</scientific_name> | |
361 </taxonomy> | |
362 <clade branch_length="0.028397"> | |
363 <confidence type="bootstrap">100</confidence> | |
364 <taxonomy> | |
365 <id>9348</id> | |
366 <scientific_name>Xenarthra</scientific_name> | |
367 </taxonomy> | |
368 <clade branch_length="0.060711"> | |
369 <name>ENSDNOG00000038771</name> | |
370 <taxonomy> | |
371 <id>9361</id> | |
372 <scientific_name>Dasypus novemcinctus</scientific_name> | |
373 </taxonomy> | |
374 <sequence> | |
375 <accession source="Ensembl">ENSDNOP00000034947</accession> | |
376 <name>BRCA2-201</name> | |
377 <location>JH578084.1:11711-90821</location> | |
378 <mol_seq is_aligned="0">CPWDPKRGQLFFEIFEMRCSKTDLGPISLNWFEELSSEAPPYISEPAEESGCKISSYEPNLFKTPQRKPFYNHLASTPVIFKEQDLTLPLHQSPLKESEKYIQDIGKDIANRKQRSHRTRRTNVFQANDVTSPPLNSCLNESPGLRFTLETPQREKSVVCGSLFHTPKFMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASETVSPKNTTAILKSYLSNQDEILHKNKPIPSVPGNKNKNQGEALSPELGKIFENSFEEESICEDHFENSVPHALEDEVREPVVDISEEDSFSLCVTKYKIENIQKIKTGKARDQKFSRTITDTLEEAKKEMSENRHSFAPEVEPNDNPLESNMTNQKPVGKSSDKISEEVLPSSGSDWSQLSSNLNRTLMERIPLIRISTCDHNNLGKDLIGTEKECAIFVTSEDSLPHILSLPKTEKISTEEIMVNKRGEEQCLESHKESSLSVEQTISGFSLIASPLQGIKKSIFRIRESPEEPFSSTVFSGNMNDSNSKKELEASANRLEIYAVCSQKESSLCPNSVDNESSPASVKQTYVTLKHTGLISTLKKKTKKFVYAINDKTSYQGEEIQKDQESELINSSAQLDGNAFEVPLTFTKADADLLHSSVKRNCLQNDHEKPTWSLTSSSRRILRNCSNSANIFSHNKIVAQDLDFKEGKISKEELQSFITTKTDHQSILQEGHCEDPKSQRVSDVKENVLAIACHPEIQHSEECSNINVNSQKSFLYDHGNACTLILTSSSKDPPSNPVVISREKESYKMSEKLNDKNCEASFELTKNIPTEEKQEIHVLNENSKEPESLLPEKFVKVASPSMKIQFNQKTNLTVIQKDGEETDLISKITINVNSGELFPENENDSASQITNERDITVLGNTKELHEANLRCVKEPILKNSATVVYADRGNGQAAQALITKDFDSLNVVPHFTEDSNNVKQHLNITLDQDFKTYISLERDMKTNRNKDDLNTWAGLLTPISNDNFGCGFRTASNKEIKLSEHNIKKSKMLFKDIEEQSPDSLAWIEIVNTLPLDNQKKQNKPRTLDSQTVNTVSGDVQSFVSKSENINTSPQNLSLKRGLNSNYNLTPSQKAEITELSTILEESGSQFEFTQFRKPNNILKNNTFELAENQMTVVSNTSEKWKDADPDLTINHPSISQVDSSKELESTVGNKQKTACSLKNNCNRSASSHLTDKNEVEFGGFYSALGTKISVSSDSLQTAVKLFHDIETISKETSGEEDLGSFSSRKCHDSVVSMFKKENSNSDKHLNERNDKCQLTFQHDIEMTPGIFVEENTGSYKRNSENEESKYADTNRSTYNLRDSDGGNSSENDTVYIHKDENGLPCISQHNLYVKISSEYIKEGNTEIKEGLSDLTCLEVVKAEETFTVNTSNEEQLTSNKMGQNGKDSDIFNLPLQTESGKNISVSKESLNNVVNFFDKNCTEELKTSSDSLNSELLSGINNKKDISSHEESNLAKKIHKGSIPVGTENQLPALQIQPECELEKIKEPTMLGFHTASGKKVNITKESLDKVRNLFDEQMQDNITEIANCGHLGTKTLMEREECKEGLELACETFEVNTLPEYEEMQNSLDDNKQNLVFTETTVLPRHLSDNLCGQTEILEASNSISLKVKAHENTEKETKSPATCYADQSICSAIENSNLAFYTGHGRKISVNQTSLFEAKKWLRKGELEDQPVRIIRLNEYHEDCVGNPSFGNSSNSIITEDDKNHFFEKADSILSSNSNMSNTCSYHFCHSDEVYNKSEYLSKNKIDNVDPVVENVKDRRSMSFSEEPSVKEVNTHPQTVNENSCIKKLFSNSSSCKNKNAAFELDLSDSHNFDVGPPAFSTASGKIVCVSHETIKNVREIFTDNHSKIIKQNTESKSDTCQTKIVAGCYETLEDSKDVIFPGSLDCKEHSIRSHENFADIKSEGILQHNQSTPGLEKIAKIPCRTNLKTSDTCQFNIGKLPKSFSSANACGIFSTASGKSVQVSDTSLQKARQIFSETEISAKQFFSKVSFRSNEHSDQFTKEENNMTLSNSLPSSQKGFSCNVVTSSAYSEFSTASGKQVLISKSALHKVKGMLEEFDLIRTEYNIQHSPTSRQEVSEILPLTCVNKRTPKHSENSKLKIAYNKGFKLLHNYNIENGSSENNFPVKASPSLCLYKQDKEQSVLGTKVSLVDTIHPLGKEETLPINGKVDIGKPETFSNLPVEANIEVCSTYSKDAENYFETEAIEIARAFMEDGELTDSERPRHAKHSLFTCQGNEGKVLLNPRSGKKRGNTLVSVGEPPIKRNLLNEFDKIIENQEKTLKASKTTPDGTVKDRRLFMHHISLKPITCGPSCTTKEWQEIQNPTFTSPDQELLSKSHPFIPLTLEKSSSKLSVSGQPFYKVPATGNAKISDSITTSKPTKVFVPPFKTKSHFERDERCASRNINLEETKQTQKNIDELGSGDGENSISDSEIHLFNKNNSNKAATILFTKCGKEPLDFITNLQNARNTQDMRIKKKQRQRICPQPGSLYLAKTSTMPKISLKAAVGGHIPSVYSHKQLYMYGVSKHCIKINSKNAESFQFHAQDYFGKEGLWAGQGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRSWVYNHYRWIIWKLAAMEFAFPMEFASRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCISEIISLSTNISETSSSKAASVDPKTVANIELTDGWYALKAQLDLPLLALLKNGRLAVGQKIIMHGAELVGSPEACSPLEAPESLMLKISANSTRPACWYAKLGFFPDPRPFPLRLSSLFSDGGNVACVDVVIQRAYPTQWMEKTSCGLYIFRNERAEEKEAAKYAEAQQKKLEALFTKIQVEFEEQEENATKQCAPSHVLTRQQVRALQDGAELYEAVKNAPDPGYLEGYFSEEQLRALNNHRQILNDKKQAQMHLEFRKAIESAEQRVQGLSRDVTTVWKLRIISYETEEKNSVILSIWRPSSDLYSLLREGKRYRIYHLATSKSKSKSERVNIQLTATKKTQYQQLPTSDEILFQVYQPREPLHFTKLLDPDFQPACSEVDLIGFVVSVVKKIGLAPLVYLSDECYNLLAIKFWVDLNEDIIKPYMLIAASNLQWRPQSKSEIPTLFAGDFSIFSANPKEGHFQETFNKMKNTIENIDIFCHDAEKKLMLILNANDPKWSTPTKDYTSGPHTAQAVLGTGNVFLMSSPINEINYQSPLPLCKPKAKSVPTPVSAQMTSKSCSKEEKEISDPKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKDLNFPQMTPPKKFNELSLLEKDSIADEELALINTQILLSGSARENQLISISGSTRTPPTSSKDYLGQKRHCATSMTKEQENPQTSTEECETSLQDIHTTKNRSKRLQRQQKRK</mol_seq> | |
379 </sequence> | |
380 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">dasypus_novemcinctus</property> | |
381 </clade> | |
382 <clade branch_length="0.056068"> | |
383 <name>ENSCHOG00000008817</name> | |
384 <taxonomy> | |
385 <id>9358</id> | |
386 <scientific_name>Choloepus hoffmanni</scientific_name> | |
387 </taxonomy> | |
388 <sequence> | |
389 <accession source="Ensembl">ENSCHOP00000007822</accession> | |
390 <name>BRCA2-201</name> | |
391 <location>GeneScaffold_3963:155-56284</location> | |
392 <mol_seq is_aligned="0">MPVRAKKRPTFFEVFKMRCSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFREQGLTLPRHQSPLNESDNYRLDLGNDIAHSKHRSHCTVRAKMDQASDVTSPPLNSCLSESPVLRRTNVTPQREKSXXXXXXXXXXXXXXGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEAPETISFNDTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKTLENSFDEVNSCEDHFGKSVPNVLEDDIRETVVDISEEDSFSFCVTKYKTENIKEIKTGKTRKKKLSKTVTDKEAKKEMHENKHSFASEMEPNNSDPLDSHVTTQKPIGNGSDRISKEVVPPSASKQSQQTPSGPNRTQIDKIPLICISACDQNNPKKDQIGTKRMANFISSENSLPHILSLPKPEKILNEEIMINKRDGVQYLESHEECVLPVQPAISGSSPVASPFQGIKKSIFRIRESPVETFSTVFSGNMNDSNCKGELEASESGLELYAVFSQKESSLCPSSVDNESRPTPTKQTSVTSKNAGLISTLKKKTKKFIYAVNDKTSCEREKVQKDQESELTNCSTHHEADAFEAPPTSTQAGPGILHSSVKRNCLQYDHEKQTWSLTSSFGMTLRKCSNNESIFSNNKITAQDLDYKEGKNNKEELQSFIATEADHRSCLQGRHCEDDPKSQRISDIKEKGLATACHPIIQPSGEECSDIHIQSQKSLLYDHKNACTFLLTLSSKDPPSNPVMISREKESYKMSGELEYKNCEANFELTKNIPTEKKQEIHVLNENSEEAELLLPKKLVKVTSPSMKIQFNQNTDLTVIQKDQSNFKKTSLISKIMISANSEELFPENENDFACQITNKRNMTILENTKELNETDFRCVKEPVLKNSTTVVYTDRGDEQAAQAFITNSLDSLNVVPHLTEKDGNSVKQHLNMALGQGLKSYISLDIEVKSNRNHDYLNRWAGLLNPISSDNFGCGFRTASNKEIKLSEHNIQKSKMLFRDIEEQSANSLACIEIVNTLSLDNQKKLNKPCALDSQAANNVSVDVQSIAFVSDSENIKTTPQNLSLKQGFNSNYNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIMQNNKFEVSEKQMTVLNNTFEKWEDADPDLTINAPPITQIDSSKELERTVRNKQKSAYLLKNNCNKSASGCLTDKNEEFKGFYSALGTKISISSESLQHALKLFSDIESISEKTSAEIDPRSFSSRKCHDSISVLKTENCNNDKHFNEKDDKSQLILQNDIEMTPGVFVEENTENYKRNSENEENKCTGTDRNPCHLGESDGNDSGENDTAYIRKDENGLPYIDQHNIYLKISSQCMKEGNTEIKEGLSDLTCLEVVKAEETFNVNTSNKEQLTANKMGQNGKDFDILYLPFQTASGKNIRVSKESLNKVLNFFDENCTEELENFSASFNSELLPGIKNEMDISNLEESNLVKNNIQKGSIPVGTENQLPVLQQQPECELEKIKEPTMLGFHTASGKQVNITKESLDKVRNLFDGKMQDNVTEITDCSHLGTETLKERKECKEGLELACETFEVTTLPKQEEMQNSLDDNEKNLIYTETTMLPRLLNDNLCRQTKILKTSNSISLKVKVHKNRGKETAESPTACSTNQSTCSAIENSALAFYTGHGRKISVNQSSLYEAKKWLRKGELEDQTGKISAVDCVENPSYENSLNSIITGDDKNHLFEKADSVYLSNSGMSNSCSHHSYFCHSDEVYNKSGFLSKNKIDNSNIDPVVENVKDRKNTSFSEVPSTLREANAYPQTGNEDTCIQKPVSAFSPQKSKNATLKLAISDSDNFVVGPPAFSTASGKIVCVSHETIKKVRERFIENHGNVIKQNTESKSDPCQTKIVAGCYQALEDSEDVIFPSSLEGKEGAMHSHKDFADIQSEQILKYNQNMSGLEQVSKISSGQANLKTPDTCNFNIGKLPKSPTSTNACGIFSTASGKFVQVSDASLQKASQVFSEIEDSAKQFFSKVSFKINEEHSDKFTEESTMTHQQQLLPQKDFLYNVVKSSAYSGFNTASGKQVLISESSLNKVKGPEVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKQALPKNKKEIGKPETFSNLPMKTNREVCSTYSKDPENCFETEAVEIAKAFMEDGELTDFELLSHAKHSLFTCQRNETVLLNPRIGRRRGNTLVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKEGQEIQNPFTPPNQEFVSKSHVFKHLTLEKSSSNLSVSEKPFYKVFATGNEKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFITKLQNARDTQDMRIQKKQRQRICPQPGSLYLAKTSSLPRISLKAAVGGKVPSTCSHKQLYMYGVSKHCIKINSKNAESFQFRAQDYYGKECLWAEQGIQLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISRSWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIISLSTNISETSSSKASSVDTQKVANVELTDGWYAVRAQLDPPLMALIKNGRLAVGQKIIVHGAELVGPPDACSPLEAPESLMLKISTNSTRPACWYAKLGFFPDPRPFPLRLSSLFSDGGNAGCVDVIIQRAYPTQWMEKTSCGLYIFRDERAEEKEAAKYAEAQQKKLEALFAKIQVEFEEQEENATKPCVPSRALTRQQVHALQDGAELYEAVRHAADPEHLESCFSEEQLRALNNHRQLLNDKKQAQMQLELRKAIESAEQGVQGLSRDVTTVWKLRIISYERKQKDSVILSIWRPSSDLYSLLTEGRRYRIYHLATSKSKSKSGRVNIQLTATKKTQYQQLPASDEILFQVYQPRKPLHFTKLLDPDFQPPCSEVDLIGFVVSVVKKIGHAPLVYLSDECHNLLAIKFWIDINEDIVKPSMLIAVSNLQWHPESKSAFPTLVAGDFSVFSANPREGHFQETFNKMKNTVENIDMFCCDAANKLMHILNANGPKWSTPAKDYTSEPYAAPAVLGTGKKFLMSPPINETNHQSPLSLCKTKGKSVPTPLSAQMTSKSCKGEKEIDDSKNCKKRRAFDFLSRLPPPPPVSPICTFVSPAAQKAFQPPRSSGTNCETPTREKDLKSPQMTPSQKFSEISLLENDSIADEELALINTQTLLSGSAGENQLISISESTRTAPPSSKDCLGRKRRCVASVTAEQSSQIGTEEGQAALQTTSTRKRSE</mol_seq> | |
393 </sequence> | |
394 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">choloepus_hoffmanni</property> | |
395 </clade> | |
396 </clade> | |
397 <clade branch_length="0.011526"> | |
398 <confidence type="bootstrap">2</confidence> | |
399 <taxonomy> | |
400 <id>1437010</id> | |
401 <scientific_name>Boreoeutheria</scientific_name> | |
402 </taxonomy> | |
403 <clade branch_length="0.008809"> | |
404 <confidence type="bootstrap">14</confidence> | |
405 <taxonomy> | |
406 <id>314145</id> | |
407 <scientific_name>Laurasiatheria</scientific_name> | |
408 </taxonomy> | |
409 <clade branch_length="0.004506"> | |
410 <confidence type="bootstrap">7</confidence> | |
411 <taxonomy> | |
412 <id>314145</id> | |
413 <scientific_name>Laurasiatheria</scientific_name> | |
414 </taxonomy> | |
415 <clade branch_length="0.018072"> | |
416 <confidence type="bootstrap">99</confidence> | |
417 <taxonomy> | |
418 <id>9397</id> | |
419 <scientific_name>Chiroptera</scientific_name> | |
420 </taxonomy> | |
421 <clade branch_length="0.107453"> | |
422 <name>ENSPVAG00000000246</name> | |
423 <taxonomy> | |
424 <id>132908</id> | |
425 <scientific_name>Pteropus vampyrus</scientific_name> | |
426 </taxonomy> | |
427 <sequence> | |
428 <accession source="Ensembl">ENSPVAP00000000225</accession> | |
429 <name>BRCA2-201</name> | |
430 <location>GeneScaffold_1816:16170-64885</location> | |
431 <mol_seq is_aligned="0">LGPISLNWFEELSSEAPLYNSETAEDSEYKISSCEPNLFKTPQRKPYQQLASTPVIFKEQDLTLPLYQSPLKGLDKDRLNLGKDVTNSKHESCCTMKTKTDQANDITSPPLNSGLGESPGVPRCTHVTPQREKSAVCGSLFHTPKLMKGQTPKHISESLGAEVDPDMSWSSSLATPPTLSATVLIVRDEEASAAVFPNDTTTILKSYFSNHDESLKKNDVFIPSGPDNENKNQREARSHGWGNSFDKVSSCKDHFRKSVPNVLEDDVHENVADVSEEDSFSLCVSKYKTRNVQKLKTSKTRKNIFSETKTNECEEAKKQVRENKHSFVSEMGPNDSDPLDSSITDQKPFGNGSEAVSEAVLPSSATGWSPLTLSGLNGTQMDKTPLLHISSCDQNNSEKDLVGTGKECTNFVTLENSLPCISSVPKTETLLSEETVVNKRADRQCLESPTRAVKHALAETSLMASPLRGVEKSVLGIRELPEETSSTVFSNNMTDPDFKGELEASEGRSEIHTVCSQKDSSLCSSYVDGSWPATIIHTPVALKNTGLISTLRKKTRKFIYAVNDETSHQGLKMQKCQESGLNNHSAQFEADTFEVPSTVTNASSGLLHSSVKKNCLQNDSEELTLSSTSSLGTIPRKCSNSESNSCNNKIISQDLEYKEAKIYKEKLQSFITTGTDCLSRVQEKHCEDGPKSLRVSDIKETFLPTVCHPAVPQSEVQCSGIHFQSQESFLRDHDDTSILTPSSRDPPSNPAVISKEKESYEVSEKLQYKNCEAGFDLTKNILVEKNQEICVLNENSKKAELLSPEKTTTIASPSVTVQFNQNTNLTLIQKEQEETTSVSKITANSNSKKLFQDSENDFVFEITTEKNMPVLENFKELHEADLGCVRGPVLKSALVVDHKQASKGSVIKGFDSSNKIHDLTEKDRNNVTQQLKMTLSEDSKSDISLDIDEKSSRNDDCMDKWARLSDPISNHNFGNGFRTASNKEIRLSEHNIKKSKVLFKDIEENFCTDLAYVEVVNISSLENQKKLSKPHALNSQSTDIGSGCVQSRAFVSNSEYSHTTPPTLSLKRDFTSDHNLTPSQKAEITELSAILEESGSQFEFTQFRKPSHMIQNNPFEMPESLMPVLNAACEEWKDVDLHLTINAPSIGQAESSREFESKQKFACSLKTNCNKSTSGYLTDKNEAMFRGFYSAHGTKLNVSSEALQKAKKLFSDIENISRETDAEIDPRNLFSNKCDHSVVWMFDLENYNDKSPNEKNNKCQLIQQNNTETTTGVFVEENTVGHKKNTENEDNRCADASRNICNLGESDSSDSSKDGTVYVHEDENGWPRVDQHKVHVKPPSQYTREGNTQVKDSVSDLTCLEAVKAEETRHVNMSAKEQLTANTTGQNIKYLDVLDISFQTASGKKISVSKDSLNKVVNFFDQKCAEELNNFSDALNSELLSGINVNNMDISSHEETDMVKEKTLKESDPVCVNNELPALLPGPKCEIEKIKEPTMLDFHTANGKRVKIAKESLDKVENLFDEKRYNSEATHFSHQGTKMLKDIEECKEGLKVAHETVEITAAPKCKEMQNSLEEKKFVSNKTTMLPGLLSDNLYRQNENLKTSTSTSLKIKVHETIEKETAKSSTTHYVNPSVCSATENSVLAFYTGHGRKISVRQTSLLEARKWLREGEWDDHPEKTNAAYCVENLSCGNHSNSVITKNDKNASDKQDSAYLSNSSMSNSSSYHSDFCHSDEIYNKSESLSKHKMGNSGIEPVVTNVADGKTTGFSEVKSTVIEAHTYPQTVNEDICVQKFVTNSSPRKNKDAATGEAGSNSNDFQIGSPAFSTAGGQVVLASRGMKARERFTDACTKVIKQDSECESGPGQTQTEAGDDSEDIIFPNSPDTVPSYKVFADIQSKRSLQHSQRMLGSEEVPEMSPRWLDSKTSGVCKLNTGPPAKSVSSMQACGVFSTAGGKLVQVSGAALQKARQIFSRLEDSAEQLGARIAFEHDEDHSENATRKDDTVIRTPQMSSLTFSGFSTASGKQVSVSESAFIKVKGMLADFDFNRAECALQRPPSPRQDGSQMPPRSWIDKGAREHSTDSEMEKAYSEEFKLPNNSPTETGPSERIHSTGVSTNPSQLQEDEQRLILRGKASLVEVGHLLGKEQVLPKNMKVEIGKTETCPILPMKNIEISSYSKDPENYFETEAVEIARAFMEDGELTDSELRSRPARALACQNSGETSSLNSRTGKRRGEALFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTINDRRLFMHHVSLEPITCAPFCTSKERRETHTPHFTAPGQEFLSKSHFYEHLTVEKSSSNVSVSRQAFCKVPATRNEKRHSITTGKQMKVFVPPFKTKSHVHEDEQCVSSCTTLEECKQKQKHIGKHNSGVSENNIDDSEICQPNKDNASQAATIMSTKCEEPPLDLIPSLQNARDMQDMRIKKKHGQRVCPQPGSLSLARASGMPRVPLRAAVGGCPPSACPPEQLYMYGVSKHCVKINSKNAESFQFHVQDYFGKESLRAGKGIQLADGGWLVPSDDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFASRCLNPETVLLQLKHRYDIEIDRSRRSAIKKIMERDDTAAKTLVLCVSEVILSSTHLSETHSGKTSGAEASKAAVVELTDGWYAIRAQLDPPLSALLQTGRLGVGQKVVTHGAELLGPPEACSPLEASETLMLKISANSTRPACWDAKLGFCTDPRPFPVPLSSLFSDGGNTACVDVVIQRAYPVQWVEKTSSGLYIFRNEREEEKEAAKYAETQQRKLEALFTKIQAEFEEQEENISRQCLPSRALTRQQVRALQDGAELYEAVRAAPDPAYLESYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAVESAEQGDQVSSRDVTTMWKLRIISYEKKGKDSILSIWRPSSDLYSLLREGQRYRIYHLATSKPKNKSGRANLQLTATKRTQYQQLPASDGILVQVYQPRRPLPFPQLSNPDFQPPCAEVDLIGFVISVVRKIGLAPLVYLSDECHNLLAVKFWIDLNEEIIKPHVLIAASNLQWRPDSKSGIPTLFAGDFSMFSASPKEGHFQETFHKMRNAIENVDIFCNEAENKLMQILHANNHQWSTPTKRCTSESHAAQTALGLGSRLLMSSPTNEMNSQSPSALCKAKGKSVPTPPSAQKASKSCCKGEKEVDDPKTCKKRRALDLLGRLPLPPPVSPICTFVSPAAQKAFQPPRSCGPKYETPMKKKELNSPQTTPLKKFNDNSLLESDSIADEELALINTQALLSGSAGENRLAPPGDPTGAANCSKGDLGPPGSPPPCVGRERPHSRASAQELGPHMQDASMITNLPR</mol_seq> | |
432 </sequence> | |
433 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pteropus_vampyrus</property> | |
434 </clade> | |
435 <clade branch_length="0.064576"> | |
436 <name>ENSMLUG00000013741</name> | |
437 <taxonomy> | |
438 <id>59463</id> | |
439 <scientific_name>Myotis lucifugus</scientific_name> | |
440 </taxonomy> | |
441 <sequence> | |
442 <accession source="Ensembl">ENSMLUP00000012516</accession> | |
443 <name>BRCA2-201</name> | |
444 <location>GL429786:4166192-4250116</location> | |
445 <mol_seq is_aligned="0">MPIGCKERPTFFEIFETRCSQADLGPISINWFEELSSEAPPYNSETAEESEYKSSSYEPNPFKTPQRKPYHQLASTPVIFKEHGLTLPLYQSPLKELDMDRLDLGKHVTNSKYKSCCTMKAKMDQANDVIIPPLNSCLSESPGILRCTHVTPQREKSVLCGSLFHTPKLMKGQTRKHISESLGAEVDPDMSWSSSLATPPTLSATVLIVRDEEESSAVFPNDTTDILKSYFSDHDEGLKENDRFIPSGPNNEIKSQREAKSYGLGNPLGKVSGCKDHFGKSVPNVPEDEVHEKVGDISEEDSFSLCVSKYKKRNLQKIKNGKTRKNIFSETKNDECEETTKKQIKDNKQSFISKMEPNDSDPLDSKLRIQKHLGNGSGRISEEAVQSPVFEWSQLTLSGINGTQIGKILQNSSCDQNNSEKDLIGTEKECTNFITLENSLPRISSVPKTEKILSETSLIASPLQGIKKSRVRIRESPEETPSAVFSNNMTDLNFKEDPEASEGRLEISTIFSQKESSLCTSSINNGSHPVTIKHTSVALKNTGLISTLRKKTKKFIYTINDETSYQGLKMQKDQESGLTNYSAQFEENTFEAPSTVLNADSECIHSASVGKNCLQNDSEEPTLSLTSSFGRILRKCSNNESSSSNNEIISQDLDYKEAKINKEKLQSFITTETDHLSCLQEKYCEEDPEHQILDIKEKVLPVIFHPAMPHSEMKCSGIHFQSQESILYDLDNTSILTSGSKDPPSNPVVISRGKESYEASEKVKFKNCEPGFNLTKNIPMDNQEICVLNENSEKVELLSPEKYTILASPSLKVQLNQTTNLTVTQNVQEKTTSISKITVNSNSEELFQDNKKDFAFEIIDEWNIPLLENNEELQEADISCVREPILKHSIMVVDTGTDDKQVAKASITKDFDSSNVVHDLTENRKRVMQKMILGEDSKADMSLDIDKKSNQNNDYMDTWSELSDPISNHNFGHGFRTASNKDIKLSEYNIKKSKEFFKDIEEHFTTTLACIEIVNPSLLENQKKLSKPHPLDGQSTDTASGCEHSSALASDSENSHTTPPTSSLKRDFNSNHNLTPSQTAEITELSTILEESGSQFEFTQFRKPSHMMQNNPLEIPENQISALHTTSEEWEGVDPLMDSSRKLEDKQKSACSLQTSCNKNAAGYSTDKNEVEFRGFYSARGTKLNVSSEALQRAVKLFSDIENISEETSAEVDPRSFSSSKCNDTIVSVFQMENCNHKNFNEKNNKYQLVQQNNIEMAAGIFVEENSEDQKKNTASEDKSIGARRNICNLGESDSHDLNKNDTVCVHKDENGLPCVIDQHSIHLKSSGQFMNGGNTQVKEGVSDLTCLEVVKAEEICHVHTSNKQQLTASKMEQNIKDYDIFDISFKTASGKNVRVSKDSLNKAMNFFYQKCAEEELNNFSDALNSELLSGINVNKIDISSYEATDMVKDKTLKESDSVGIENQLLTLQTEPECEIEKIKEPTMLGFHTASGKKVKIVKEYLDKVKNLFDEKKQDSETTNYSHQRVKMLKDREECKVGFPLACETVEITTAPKCEEMQNSLMEKKLVSNEFAMLPGLLSDNLYRQTGNFKMSNSVALKIGNVEKETAKSPTTCYRNQFTCSASKNSAVAFCTGHGRKFSVNQASLLEGELDDQPEEINAAKVTCLKDNPEDYVENPSCGNHSNSIIIENDKNHLSEKQDSTYLSNSSMSNSNSDHSDFCHSNEIHDKLESLSKKGDNFGIEPIVKNVKEKKHTNFSEVIATIREANTYPQTKNEDTCVQKFVTNSSPYKNKKTDMEVAVSNSNNFEIQSPAFSTASGQMVSVSHGMKVRERFADNCTKVIRINTENKSGTGHTKTLTGYHEVVGDSEDFIFPNSLDSEEHSMHSYKVFTGIQSEQILQHSQRMSRSETVSEMLPCQSNLKASATCKFNTVSNACGIFSTASGKCVQVSDAALQKTRCIFSKLEESAEQLFSKVSFESNEEHSDRLTREENTMIHIPPNLPSPAFSGFSTASGKQVPVSESSLNKVKGMLEDFDSLRTEYGLQNSPTSGQVVSKLPLSCIDKRTPKYSASCKMEKACNKEFKLSNNCNIRSGFSENTPSLETLPCLSQFKQDEQPLVLGNKVSLVGSSHILGQEQALPKNIKIDMKPETYPNLPMTTNTEICSTYSKDPENYFETEAVEIAKAFMEDGDLTDSELLSHPEHFLTCQNKEMALLNSRTGKRRGDALFLIGEPPIKRNLLNEFNGIIENQEKSLKASKSTPDGTIKDRRLFMHHISLEPITCGPLCTTKERQKIQTPNFTEPGQEFLSKSHFYEQPTLEKSSSNLSISGQPFYKVPATQNKKRRYSITTGKPVKVFVPPFKTKSHFHRDNQCLGSNTDLEENKQKKENIGEHGSGHSKNNINNSEIHQPNKDNSNQVATIISTKCEEEPLDCIANLQNARDVQDMRIKKKHGQQIFPQPGSLYLAKTSTVPRISLKVAVEGQVPSACSHKQLYMYGVSKHCLTINSKNAESFQFHTQDYFGKEASWAGKGTQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRGWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEILSPTTSLTETSNSKTSGVDTSKTAIVELTDGWYAVKAQLDPPLSALVQKGRLAVGQKIITHGAELVGSPDACAPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVIQRAYPMQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQRKLEALFTKIQAEFEEHEENITKQCTPSHALTRQQVCALQDGAELYEAVRTVPDPSYLEGYISDEQLRALNNHRQMLNDKKQAQIQLEFRKAVESAEKGEQMLSRDVTTVWKLRIISYEKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKTKSGRANIQLTATKNTQFQQIPASDEILFKVYQPRDPLPFGQLLNPGFQPHCSEVDLVGLVVSVVKKIGLAPLVYLSDECHNLLAIKFWIDLNEDLIKPHMLIAASNLQWRPESKSEIPTLYAGDFSMFSANPKESHFQETFHKMKNTIENIDRFCNDAENKLMHMLNAKDPKCSTPTKDYTSEPHTVQTVHGRGNTFLMSSPKSEMNYQSSLSLCKPKGKSVPTPVSAQMTSKSCKGEKEVDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELSSPQITPLKKFNDISVLESDSIADEELALINTQTLLSCSAGKKQLVSMGESTGTAPTCSRYDLERKRHHFTPMVTEQNSHISTGETGDSIQDTSTIQDTSKGLQRQQNRK</mol_seq> | |
446 </sequence> | |
447 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">myotis_lucifugus</property> | |
448 </clade> | |
449 </clade> | |
450 <clade branch_length="0.000302"> | |
451 <confidence type="bootstrap">5</confidence> | |
452 <taxonomy> | |
453 <id>314145</id> | |
454 <scientific_name>Laurasiatheria</scientific_name> | |
455 </taxonomy> | |
456 <clade branch_length="0.027617"> | |
457 <confidence type="bootstrap">100</confidence> | |
458 <taxonomy> | |
459 <id>33554</id> | |
460 <scientific_name>Carnivora</scientific_name> | |
461 </taxonomy> | |
462 <clade branch_length="0.010565"> | |
463 <confidence type="bootstrap">100</confidence> | |
464 <taxonomy> | |
465 <id>379584</id> | |
466 <scientific_name>Caniformia</scientific_name> | |
467 </taxonomy> | |
468 <clade branch_length="0.043063"> | |
469 <name>ENSCAFG00000006383</name> | |
470 <taxonomy> | |
471 <id>9615</id> | |
472 <scientific_name>Canis lupus familiaris</scientific_name> | |
473 </taxonomy> | |
474 <sequence> | |
475 <accession source="Ensembl">ENSCAFP00000009557</accession> | |
476 <name>BRCA2-201</name> | |
477 <location>25:7734450-7797815</location> | |
478 <mol_seq is_aligned="0">MPVGCKERPTFFEIFKTRCNQADLGPISLNWFEELSLEAPPYNSEPTEESGYKISYEPNLFKTPQRKPYNQLASTPIVFREPIYQQSPLKELDKYRLVSGKDITDSKHKSCCTMKSKMDRANDVTSPPLNSYLSESPVLRCTHVTPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLIVRDEEVSAAVFPNDTTAIFKSCFSNHDESLKKNDRFIPCGPGKENKNQREAKSQSLGNSFGKVNSTKDHFVKSTPNVLEDEVHEKVLDVSEEEDSFSLCVPKYKTRNLQKIKTSKTRKNIFNETKTSECEEAKKQMKENKHSLVSEMEPNDSHPLDWNVTHEKPFGNGTDKISKEIVLSSASGCSDLTLSSLNGAQMEKTPLLHTSYDQNNSEKDLIITDKECTNFITLENSWPQISNVPKYSEKTLNEEIVVNKINEGQCLESHEDSVVSVKQAIYETTLIASPLQGIRKSIFRIRESPEGMSNAMFSNNMTNPNFKEPEASESGLEKHTICSQKEDSLCTSSIDDGSWPATIKHTSVALKNLGLISSLKKKTKKFIYVINDETSNQGLKTQKDQESRLINLSTQFEANAFEGPLTFTNADSGLLHSSSIKKNCLQNDSEKPALSLTSSFGTILRKVSSNGASSPNNKIISQDPDYKEAKINKKKLESFITTETDCLSSLQEKHWEDDAKKPRVSDIKEKVLPTASHPPVPHSEVEGNDIHFQSPESFSFDCDNTSLLTPSSRDSPSSLVVMSRGKESYKISEKLKCKNHETGFELTKNIPMEKNQDIHVLNADSKNAKLLSTEKHITVASSSVKVQFNQNANLTTIQKDQKETTLISKITVNPNSEELFPDDENNFVLKITNESNTPVLGNTKELHDSNLCCVRDSVPKNSTMVVCTDLDDKQTAKVSIMKDCYSSSIDDLTERNRSTIKQQLKMTLDQDSKSDITSDIVRKSNGNSDYMDNWARLSDPISNHSFENGFKTASNKEIKLSENNIRKSKMLFKDIEEHYPTNLACLEIVNTSSLESQKKPSKSHALDPQSINIISGFVQNSTYVSDSESGHTAPPTLSLKQDFDSNRNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIIQKNPFEMPENQLTILNSTSKEWKDDDLHLTTNAPSISQVDSKKSEGIIGGKQKFACLSRTSCNRSASGYSTDKNEVEFRGFYSARGTKLNVGSEALQKAKKLFSDLENINEETSVEVDRSFSSSKYNDSVSMIQIEDCNDKNLNEKNNKCRLILQNNIEMTTDIFVEEYTESYRRNTENEGNQCTDAGRNTCNSESDGSDSSKNDTVYIHEEENGLPCIDQHNIDLKLFSQFMKEGNTQIKEGLSDLTCLEVMKAEETSHVTMSNKQQLTANTGQNIKDFDTFYLSFQTASRKNIRVSKESLNKARSLLNQKWTEEELNNFSDSLNSELLPGIDIKKTDISNHEVIENTERKDKITKESDLIGTENILLILQQRPESKIKKIKESAVLGFHTASGKKIEITKESLDKVKNLFEEKEQDNSEITNFSHRGAKMSKDREECKDGRELACGTTEITTTPEYEETHSSLEKKKLVSNEIAALRPRLLSDNLYKQTENLKISDHASQKVDVHENTEKETAKKPTMYTNQSTYSAIENSPLTFYTGHGRKISVSEASLFEAKKWLREGEWDDQSERINAAKVNCLKEYPDDYVENPSCGNSSNSAITENDKNHLSEKQGSTYLSNSTMSNSYSYHPGFCHSSEVYNKSEYLSRSKIDNSGIEPVIKNIRERKNIGFSEIMSPGREADTDPQSVNEDICVEKLATNSSCKNKNTAIKVAISDSNNFNTIQKLNSDSNNSVPAYSTVNSKRVFVAHQTKVTEGFTDNCSMVTKQNTKSKSDTCHAEIVADYPKALDDSEAIFPNSLGAIECSPSHKVFADIQSEQTSQLNQSMSGLEKVSETPPCQINSKTSDRCELPRGKLPKSVSYTNACGIFSTASGKSVQVSDAAIQKAREVFSKLEDSAKQLFPEVSLKDNEEHSEKFTNEENTVIYTSQNLLSSAFSGFRTASGKQVPVSESALCKVKGMLEEFNLIRTESCLQHSSTSRQDVSKMPPPSCIGKRTPEHSRNSKLDKACNKEFRLSSNCNNQSGSSENHHSIKVSPCPSQLKRDKPQLLVGSKGSLVENIHPLGKEQALPKNIKTEIGKAETFPNLPVKTNIEFCSTYSKDPENYFETETVEIAKAFMEDGELTDSELLSHAKHFVFTCQNTKEMVLLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIKNQETSLKASKSTPDGILKDRSLFMHHISLEPISCGPFRTTEERQEIQNPNFTAPGQEFLPKSHFYEHLASEKSSSNLSVSRQPFCMVPATGNEKRRHLIAPGKPVKVFVPPFKTKSHFHRDEQCISKNTKLEKNKQNSKDIDELGSGDSEKNINDSGIHQLKKNNSNQAATIIFTKNEKEPLDLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTLPRISLREAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHAQDYFGKEGLWSGEGIQLADGGWLIPSNDGKIGKEEFYRALCDTPGVDPNCISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDKSRRSAIKKIMERDDTAAKTLVLCISEIISSSADISETSSSKTSSVGTKKVGIIELTDGWYAIKAQLDPPLLALVKNGRLTVGQKITIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEIQQKKLEVLFNKIQAEFEKNDENITKQCIPSCALTRQQICALQDGAELYEAVTNAPDPSDLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFKKAMESAEQGEQILPRDVTTVWKLRIISYRKKEKDSVTLSIWRPSPDLYSLLIEGKRYRIYHLAASQSKSKSGKANTQLTATKKTQYQQLPASDEILSQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPVVYLSDECHNLLAIKFWTDFNEDIIKPYTLIAASNLQWRPEAKSGIPTLFAGDFSRFSASPKEEHFQETFHKMKNTVENIGMFYNDAENKLVHILNANDPKLSTPTKDYASEPHTAQIVLGIGNKFLMSSPNNEMNYQSPLSLCKPKEKSVPIPGSTQMTSKSYCKEEKEMDDPKTCKKRRALDFLSRVPLPPSVSPICTFVSPAAQKAFQPPRSCGTKYETLMKKELNSPQMTPRKFNDLSLLESDSIADEELAMINTQALLLGSPGEHQLVSVSDSTRTAPTSSKDYLGLKRHSTAPGVRGPESPQACTRKREPRVQNTSDLKRTSLRLQRQQTQK</mol_seq> | |
479 </sequence> | |
480 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">canis_familiaris</property> | |
481 </clade> | |
482 <clade branch_length="0.008616"> | |
483 <confidence type="bootstrap">100</confidence> | |
484 <taxonomy> | |
485 <id>379584</id> | |
486 <scientific_name>Caniformia</scientific_name> | |
487 </taxonomy> | |
488 <clade branch_length="0.028288"> | |
489 <name>ENSAMEG00000009390</name> | |
490 <taxonomy> | |
491 <id>9646</id> | |
492 <scientific_name>Ailuropoda melanoleuca</scientific_name> | |
493 </taxonomy> | |
494 <sequence> | |
495 <accession source="Ensembl">ENSAMEP00000009909</accession> | |
496 <name>BRCA2-201</name> | |
497 <location>GL192584.1:1852747-1917315</location> | |
498 <mol_seq is_aligned="0">MPIGCKERPTFFEIFKTRCNEADLGPISLNWFEELSLEAPPSNSEPTEESGYKINYEPNLFKTPQRKPYHQLASTPIIFRDQGLIVPTYQQSPLKELDKYRLDSGKDITNSKHKSCCTMKSKMDQTNDVTSPPLNSCLSESPVLRCAHITPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVVRDEEASAAVFPNDTTAIFKSCFSNHDESRKKNDRFIPSGPDKENKNQREAKSQGLGKMLGNAFGKVNSCRDHFGKSTPSVLEDEVHETVADVSEEDSFSLCVPKYKTNLPKIKTSKTRKNIFNETKTSEYGEAKKQMKENKHSFLSEMEPNDSDPLDWNVTNQKPFGNGSNKISKKVVPSSASEWSHLTLSGLSGTQMEKTPLLHISSCDQNNSEKDFTITEKESTNFITLENSLPQISSVPEYSEMTLNEERVVNKIDEEQCLGTHEDSILSLKQAVTETTLIASPLQGIRKSIFRIRESLEETSSAVFSNNMTDPNSKEELEVPESGLEKHNICSQKEDSLGSVDNGSWSATIKHTSVALKNSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQESGLTNHSAQFEANAFEGQLTFTNADPGLLHSSPVKKNCLQNDSEEPTVSLTSSFGTVLRKVSNNGTSSPNGKTVPQDVDYKEAKTNNEKLQSFIITETDCLSSLQEKHCEDDAKSQRVSNIKQKVLPAVSHPPVPHSEVEGSGIHFHSPESSSSDHDNTSLLTPSSREPPSNPVVISRVKESHKMSEKLKCKNCEAGFELTKSIPMEKNQEIHVLNANSKNAKLLSSEEYVTVASPSMKVQFNQNANLTTIQKDQKETTLISKIAVNPNSEELFPDDENNFILEVTNESNIPVLGNIKELHDADLCCVREPVLKNSTMMMYTDMEDKQTAKVSIMKDFDSSNIDDLTEENRNGIKQQLKMTLDQDSKSDITLDIVRKSNGNNGYMNNWARLSDPISNHSFRNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTNLACIEIIDTSSLESQKKLSKPLALDPQSINSVPGFVKSSTYVSDSKSGHAAPPTLSLKRDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFKKPSHIIQKNPFEMPESQLTILNSTSEERRDTDLHLTINAPSITQVDSSKKFEGILGGKQKFACLSRTNCNRSASGYLADKNEVQFRGFYSARGIKLNVGSEALQKAKKLFSDLENISEETSVEVDTRIFYPSKCNDSAVSMIQIEDCNNDKNLNEKNNKSQLILQNNIEMTAGIFVEETTESYKRKTENEDNQCTDASRNTHNLESVGSDSSKNDTVYIHEEENSFPCIDQRSIDLKLSSQFMKEGNTQIKEGLSDLTCLEVAKAEETFHVNTSNKQQFTANTMGQSIKDLDIFDVSFHTASGKNIRVSKESLNKVINLLDQKWTEEELNNFSDSLNSELLSGTDINKTDISSHEKTENTERKDKIMKESDLTCTKNKLPTLQQRPESEIKKITAPTMLGFHTASGKKIEIAKESLDKVKNLFDEKEQDYSGITNFSHQEAKMSKDREECKDGLELACETIELTTAPKYEEMQNSLEEKKLVCNEIAVGPMLLSDNLYKQTENLKTDCSSLKVKVHEDTEKKTGRKPTIYTNQSTYSAIENSPLAFYTGHGRKISVSEASLFEAKKWLREGEVDDQPEKINAAKVICLKEYVDDYVENPSCGNSSSSTITENDKNHLSEKQGSTYLSNSTVSNRYSCHSDFSYSSEVYNKSEYLLKNKVDTPGFEPVMNNVRERENTSFSEIMSTVREVDTDPQSVNEDICVQRLVTSSSCKNENTAIKVAISDSNNFNSIPKLNLDSNNAVPAYGTASSKRIFVAHQTKVTERFTDNCSMVIKQKTKSKSDTYHVKIVAGYPNALGDSEDIVFPNSLDNAEHSLSSHKAFADIQSEQTLQLNQSISGLEKVSEIPSCQNNSKIPNICKFSTGNLPKSVPCTNACGIFSTASGKSVQVSDTALQKARQVFSKIEDSAIQLFPKVSFKNNEQSDKFTNEENTMLHTSQNLLSSAFSGFSTASGKQVPVSESALCKVKGMLEEFDLIRTDCGLQHSSTSRQDVSKIPPPSCIDKRALEHCGNSKLEKAYNKEFKLSSNCNTESASSENHFSIKLSPCPSPLKQDNQQLLLGSRVSLIENIDLLGKEQALAKNIKTEIGKTETFPNLPVKTNTEICSTYSKDPENYLETETVEIAKAFMEDGELTDSELLSHAKHSLFTRQNTKETALFSSRIGKRRGDALVSLGEPPIKRNLLNEFDRIIKSQEKSLKASKSTPDGTLKDRSLFMHHISLEPITCGPFRTTKERQEMQNPNFTAPGQEFLSQSHFCEHGALEKSSSNLSVSGQPFCTVPATRNEKRRHLNTPGKPVKVFVPPFKTKSHFHRGEQCISKNTNLEENKQNLKNIDEHGPGDSETNINDSGIHQLKKNNSNQAAATIIFTKGEKEPLDLITNLQNARDTQDMRIKKKQRQHIFPEPGSLYLAKTSTVPRISLRGAVEGQVPSACSHKKLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEGLWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDRSRRSAIRKIMERDDTAAKTLVLCVSEIISSSTDISETSSSKTSSVGAKKGGVVELTDGWYAVKSQLDPPLSALVKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKHDENTTKRYVPSCALTRQQVCALQDGAELYEAVTNAPDPNYLEDYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSRNVTTVWKLRIISYGKKEKDSVSLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKANIQLTATKKTQYQQLPASDEILFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPLVYLSDESHNLLAIKFWTDLNEDIIKPYTLIAASNLQWRPEAKSGIPTLFAGDSSRFSASPKEGHFQERFLKMKNTIENIGMFCNEAENKLMHILNANDPKLSTPTKDYASELHAAQTVLGMGNKFLMSSPSSEMNHQSPLSFCKLEETSVPTPGSAQMTSKSYCKGEKEMDDPKNCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRTCGTKHETPIKKKELNSPQMTPHKFNDLSLLESDSIADEELALINTQALLSGLAGENQLMSLSDSARTAPESSKDYVRPKRHCTASGLSGCRSPQARTEERETDGQDASTAKRASMRLQRRQKQK</mol_seq> | |
499 </sequence> | |
500 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ailuropoda_melanoleuca</property> | |
501 </clade> | |
502 <clade branch_length="0.031962"> | |
503 <name>ENSMPUG00000001945</name> | |
504 <taxonomy> | |
505 <id>9669</id> | |
506 <scientific_name>Mustela putorius furo</scientific_name> | |
507 </taxonomy> | |
508 <sequence> | |
509 <accession source="Ensembl">ENSMPUP00000001928</accession> | |
510 <name>BRCA2-201</name> | |
511 <location>GL897055.1:4516525-4575778</location> | |
512 <mol_seq is_aligned="0">MPIGCKERPTFFEIFKTRCNEADLGPISLNWFEELSLEAPSYNSEPTEESGYKISYEPNLFKTPQRKPYHQLASTPIIFQEQGLIVPMYQQSPLKELGRNRLDSGKDITNSKHKSFCTMKSKMDQTNDVTSPPLNSCLSESPFLRCTHVTPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASAAVFPNDTTAICKSCSPKHDDSLKKNDRCIPSGPDKENKNQREAKSQGLGKMLGNSFGKVNSCKDHFGKSTPNVLEDEVCETVADVSEEDSFSLCVPKYKTRNLPKIKTSKTRKNIFNETKTNECEETKKQMKENKHSFLSEMEPNDSDPLDWCVTKPKPFGNGNEKISKEFIPSSASEWSHLTLSGLSGTQMEKTPLLHSSSCDQSNSEKDFTITEKESTNFITLGNSSPQISSVPKYSEITLNKETVVNKIDEEQCLGSHEDSVLSGKRTISETTIIHSPLHGIRKSIFRIRESPEEMSSAMFSNHMTDLNSKGEIDTPESTLEKYTICSQKEDSLGSIDNGSWPATIRRTSGALKTSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQELGLTNHSDQSEANAFEAPLTFTNADSGLLHSSSVKKNCSQNDSEEPALSLISSFGTILRKVSNNGTSSVNNKTVPQDLDYKETKINKEKLQSFITTETDCLSSLQEKHCEDDAKSQRVSDTKEKVLTAVSYPPVPHSEVEGCGIHFQSPESFSSEHDNTSLTPSSRDPPSNPVMTCRGKESYKISEKLKCKNHEGGFELIKNIPMEKNQEMHVLNANSKNTEVLSTEKYVIVASPSMKVQFNQNTNLATIQKDQKETTLISKIAVNPNSEELFPNDENNFVLEITNESHIPVLGNIKELHDADLCCVREPVLKNSTMMVYTDMDDKQAAKLSIMKDFDSSNIDDLTEKNGNSIKQQLKMTLDQDSKSDITLDVVRKSNGNNDYMNNWARLSDPVSNHSFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTNLACIEIVNTSSLESQKKLSKPLTLDPQSINSVSVFVQSSAYVSDSESGHIAPPTSSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYIIEKNPFEMPENQLTILNRTSEECRNTDLHLTINAPSIIQVDSSKKFEGILGGNQRSACLSRTNCNRSACGSLADKNEVKFRGFYSARGTKLNVGSEALQKAKQLFRDLENIIEEPSVEVDTRSFSSGKCNDSAVSMIQIEDCNNDKNFNEKNNKNQLILQNNIEMTAGIFVEENTEGYKGNTENEDNQRTDASGNTHNLESVSSDSNKNDIVYIHEENSLPCIDQHNIDQKLSSQLMKEGNTQIKECLSDLTCLEVAKAEETFHVNTSNKQQFTANTMGQNIKDFDIFDLSFQTASGKNIRVSKESLNKVINLFDQKWTEEELNNFSDSLNSELLSGVDINKIDISSYEKTENSERKNKIMKESDLIGTENKLLTLQQRPESEIKKIKEPTMLGFHTASGKKIEIAKESLDKVKNLFDEKEQGDSGVTNFSHQGAKMSKDREKCEDGLELACETIELTAPKYEEMQNSIKEKKLVSSEIVVAPRLLSGNLYKQTENLKISDQDSLKVKVHENTEKETAKNHMIYTNQFTYSAIENSPLAFYTGHGRKISVSETSLFEAKKRLREGELDDKPEKINTATVICLKEYPDDCVENPSCGNSSSSTISENDKNPPSEKQGLTYLSNSTVSNRYSYHLDFCHSSEVYKKSEYLSKNKGDNSVIEPVVKNVRENTIFSEITSTVREADTDPQIINEDICAQKLVTNSLCKNENTAIKVAICDSNNFNSIQKLNSDSNNAIPAYSTASSKRVFVAHQTKATEGFTNNCSMIIKQNPKSKSDTCHMRIVAGYPNTLDDSEDIIFPDSLDDAEHQSSSQKVLADIQSEHTLQLNQSISGLEKVSEIPTCQNNSKTSDTCKLNTGKLPKSVSCTNACGIFSTASGKSVQVSDAALQKARQVFSKIEDSAKELFPKVFKNSEHSDKFTNEENAMLQTSQNLLSSTFSGFSTASGKQVPVSESALCKVKGMLEEFDLIRTECGLQHSSTSRQDVSKIPPPSCIDKRTPEQCGNSKLEKAYNKEFKLSSHCNIERESSENHHSIKVSPCQSQLKQDKQQLLLGSKVSLVENIHLLGKEQDLPKNIKTEIGKTETFPNLPVKRNIEICSTYSRDPENYLETETVEIAKAFMEDGELTDSELLSHAKHSLFTCQSTEEMVLLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIKNQEKSLKASKSTPDGILKDRSLFMHHISLEPITSGPLRTSKERHEMQNPNFTISGQEFLSKSRFYEHLALEKSSSNLSVSGQPFCTVPATRNEKRRHLNTPAKPVKVFVPPFKTKSHFHRDEQCISKNTNLEENKQNPEKIDEHGPGESETNINDGGIHQLKKNNSSQAATIIFTKCEKEPLDLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTVPRISLRGAVEGRVPSPCSHKQLYMYGVSEHCVKINSKNAESFQFHTEDYFGKEELWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDRSRRSALKKIMERDDTAAKTLVLCISEIISSSVDISETSSSKTNSMGTKKVGIIELTDGWYAVKAQLDPPLSALVKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKIAANSTRRARWYAKLGFSPDPRPFPLSLSSLFSDGGNVGCIDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKHDENITKQCRPSCALTRQQVCALQDGAELYEAVANAPDPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSRNVTTVWKLRIISYGKKEKDSVTLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKVNIQLTATKKTQYQQLQASDEILCQIYQPREPLNFNKLLSPDFQPPCSEVDLVGFVISVVKKIGPSLLHPKDFEPGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHTLIAASNLQWRPEAKSRIPTLFAGDFSRFSASPKEGHFQEIFHKMKNTIENIGMFCNDAENKLMHILDTNGPMLSTPTKDYASEPYTAQTVLGMGNKFLMSSPSGEMNYQSPLSLSKPKEKSVPTTGSAQMTSKSYHKGEKEMDDPKNCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRACGTKYETPIRKKEFNSPQMTPLKFNDLSLLESDSIADEELALINTQALLSGSAGENQLMSLSDSTKTAPENLKDYFRPKRHSLASGATGCWSPQAHTEERETNVQDASSMKRASVRLQRRQKQK</mol_seq> | |
513 </sequence> | |
514 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">mustela_putorius_furo</property> | |
515 </clade> | |
516 </clade> | |
517 </clade> | |
518 <clade branch_length="0.056037"> | |
519 <name>ENSFCAG00000025587</name> | |
520 <taxonomy> | |
521 <id>9685</id> | |
522 <scientific_name>Felis catus</scientific_name> | |
523 </taxonomy> | |
524 <sequence> | |
525 <accession source="Ensembl">ENSFCAP00000019777</accession> | |
526 <name>BRCA2-201</name> | |
527 <location>A1:11398212-11455078</location> | |
528 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELCLEAPPYNSEPTEESGYKISYEPNLFKTPQRKPCHQLASTPIIFKEQGLIPPIYQQSPLKELGKDITNSKHRSCCTMKSKMDQTNDVTSPPLNSCLSESPLLRSTHVTPQREKSVVCGSLFHTPKLTKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASAAVFPNDTTAIFKSYFCNHDESLKKNDRFIPSGPDSENKSQREAKSQGLGKMVGNSCDKVNSCKDPFGNSTLNVLEDGVRERVADVSEEDSFPLCVPKCKTRNLQKIKTSKTRKNIFNETTDECEEAKKQMKENKHSFVSEMEANASDPLDSNVTNQKPFGNGSDKISKEVVLSSASESCHLTLSGLNGTHMEKLPLLCISSCDQNNSEKDLITTEKECTNFIILEDSLPQISGVPKCTEKILNEEIVVNKIDEGQCLESHEDSILAVKQAVFETSLIASPLQGIRKSIFRIRESPEETFSAVFSNNITDPNFKEEHEASESVLEKHSICSQKEDSLSTSSLDNGSWPATIKHTSVALKNSGLISTLKKKTKFIYVVNDETSYQGLKTQKDQQSGLMNYSAQFEANVLEGPLTFANADSGLLHSSVKKTCLQNDSKEPILSLTNSFGTLLRKVSNNGSSSPNNKIISQDLDYKEAKIKKEKLQSFISTETNCLSSLQEKHCEDDTKSQRVADRKEEILPAVSQPSVPYSEVEDSGIHFQTLKSFSSDPDKSSQLTPHPRDPPSNPVGLSRGRESYEVSETLKCKNHEAGFELTKTMENNQEIHVLNEHAKKAKLLSTEKYVTEASPSMKVPFNQNAHLTIIQKDQKETTLISKITMNPNSEELFPDGDNFVFKITKERNVPVLGSIKELQDSDLCCVKEPVLENSTMVVYTDMDDKQAAKVSITKGFDSSNIDDLTEKDRNSIKQQLRMTLDQDSKSDITLDSDMKSNGNNDYMDNWARLSDPILNHNFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEERYPTNLACIEIVNTPLESQEKLSKPHILDPQSINTVSGCVQSSAYVSDSENRHTTPPTLSLKRDFDSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHLKQKNPCEMPEKHLTISNTTPEEQKDGHLRLTINALSISQGDSSKKFEGIIGGKQKLACLSKTSCNKSASGHLTGKNEVEFRGFYSARGTKLNVCSEALQKAKKLFSDLENISEETSVEVGIRSFSSSKCNGSVSMFKKENCNNEKKLNEKNNKYRLILQNNIEMTTGIFVAEDTEGYKRNIENKANKYTDASRNVYNFREADGSDSSKNDTVYIHKEENGLPYIDQHDIDLKLSSQFIKEGNTQIKEGLSDLTCLEVVKAEETLHVNTSNKEHLTANTMGRITKDFDIFDVSFQTASGKNIRVSRASLNKVTNLLDQKCTEEELNNFADSLNSELLSGIDINKADISHHEKMENTERKDKMKESDLTGTENKSLTLQQRPEYEIKKIKEPTILGFHTASGKRIEIAKESLDKVKNLFDEQEQDKSEMTNFSHRGTKMSKGREECEGGLRLACKTIEITPASKEEEMQKPLEKNLVSNEIVVVPRLLSDNLYKQTENLKIPNRASLKVKVHENTGKETAKKPTTCTNQSTYSATENSALSFYTGHGRKISVSQSSILEVKKWLRGGELDDQPEKTVYNISEYLPKSKVDNSGIEPVVRNVGERENTSVSEIMFTVREADTDPQSVNEDICVQRLVTNFSCKKENTAIKVTVSDSNNFDSTQKLNSDSNDAVPVYTTASSERVLVAHETKVTEGFTENCSMAIKQTTKSKPGKIVAGYRKAPDDSEDTICPNSLDGAECSSPSHKDFAETQSEQTLQLNQSISGFKKRSEIPPHQINLKTSDICKLSTGKCLQSISYTNACGIFSTASGKCVQVSDAALQKARQVFSKVEDSAKQPFSKVSFKHNEDHSDKFTREENTMIHTPQNLLSSAFSGFSTASGKQVPVSESALCKVKGILEEFDVMRTECGPQRSPTSRQDVSKMPPPSCVDNRTPEHSVNSKLEKAYNKEFKLSSNSKIENGSSENHSVQVSPYPSQFKQDKQLIQGNKASLVENIHLLEKEQALPKNIKMEIGKTEAFPNLPLKTDTAIHSTDSKDPENYFETETVEIAKAFMEDGELTDADLLSHARHFLPTCQHSEETLVSNSRRGKRRGVLVSVGEPPIKRNLLNEFDRIIKNQEKSLKASKSTPDGIIKDRSLFMHHISLEPVTCGPFSTTKKRQEIQNPNFTAPGQKFLSKSHFYEHLALEKSSSNVSISGQPFCTVPATRSEKRGHSITPSKPVKVFVPPFKTKSHFLQDEQHISKNTHVEENKQKPNNIDERSSGDSKNNINNSEIHQLNKNNSSQAATMVFTKCEKEPLDLIASLQNARDIQDMRIREKRKQRIFPQPGSLYLAKTSTVPRISLRVAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEVQWAKEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYYDMEIDRSKRSAIKKIMERDDTAAKTLVLCISETISSSTDLSETSGSKTSGVGTKNVGIVELTDGWYAIKAQLDPPLLALVKKGRLTVGHKIIIHGAELAGSPDACTPLEAPESLILKISANSTRPACWYAKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVVIQRTYPIQWMEKTPSGLCIFRNEREEEREATKYAEAQQKKLEVLFNKIQAEFEKHDGKMGFCALQDGAELYEAVKNAPDPASLEAYFSEEQIRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQMLPRDVTTVWKMRIISYGKKEKDSVTLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSERAHIQLTATKKTQYQQLPASDELLFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGFAPLVYLSDECHNLLAIKVWTDLNEDIVKPHTLIAASNLQWRPESKSGIPTLFAGDFSRFSASPKEGHFQETFHKMKNTIENVDTFCNDAENKLVHILNANSPKVSTPTKDYASEPHTIQTVLGLGNKLSMSSPNSEMNYQSPLSLCKPKAKSVPTPGSAQMTSKSCYKGERELDDPKTCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKRELNSPQMTPLKFNDTSLVESDSIADEELALINTQALLSGLAGEDQLMSLNDSPRTAPTSSKDYVRPKSYPTAPGIRDCENPQASTEGGEPDVQDTDTVKRSSMRLQRRQQQT</mol_seq> | |
529 </sequence> | |
530 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">felis_catus</property> | |
531 </clade> | |
532 </clade> | |
533 <clade branch_length="0.000353"> | |
534 <confidence type="bootstrap">7</confidence> | |
535 <taxonomy> | |
536 <id>314145</id> | |
537 <scientific_name>Laurasiatheria</scientific_name> | |
538 </taxonomy> | |
539 <clade branch_length="0.048224"> | |
540 <name>ENSECAG00000014890</name> | |
541 <taxonomy> | |
542 <id>9796</id> | |
543 <scientific_name>Equus caballus</scientific_name> | |
544 </taxonomy> | |
545 <sequence> | |
546 <accession source="Ensembl">ENSECAP00000013146</accession> | |
547 <name>BRCA2-201</name> | |
548 <location>17:11512132-11574407</location> | |
549 <mol_seq is_aligned="0">MPIGCKERPSFFDIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEYKINSYEPNLFKTPQRKPYHHLASTPIIFKEQSLTLPLYQSPLKESDKYRLDLGKNIVFSKSKSCCTMKAKMDQANDVTSPPLNSCLSESPVVLRCTHVTPQREKLVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIARDEEASATVFPNDTTSILKSYFSNHDGSLNKNDRVNPSGPDKENKNQREAKSHELREMLRNSFGKVNSCKDHFGESTPNVLQDKVHETVADISEEDSFSLCVSKYKTRNLQKRKIGKSRKNIFNETETDEFEEVEKQMKENKHSFVFEMEPNDSDPLDASVTNQKPFGNVSHKISKEVVPSSASGWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDIIGTEKECTNLITLENSVPRISCVPKTEKKLNEETVINKRDEGQCLESHEDSILVVKQAISETSLIASSLQDIKKSIFRVREIPEETFSAVFSNNMTDPNFKEKPEASESGLEINTLYSQKEDSLCTSSVDHGSWPATIKHTSIALKNAGLISTLKKKPKKFIYAISDEISYQGLKIQKDQESGPTNCSTQLEANTFETPVTFINSDSGLLHSSVKKNCLQNDSEEPTLSLTSFSGTVLRRCSNNESSSSNNKIISQDLDCKEAKINKEKLQSFITTETDCLSCLQEKHCEDDSKGQRVSDTKEKVLPAVCHPGMPHSEVECSDTCFQFQESFLYDHDNTSILTPSSKDPPSNLVVISGIKESYKMSEKLKFKNCETDFEFTKSIPMEKNQEIGVLNENSEKAELLSPEKYITVASSSMKAQVSQNTNLTIIKKKQEETTLISKITVNPNSEELFPDNENNFVFQIANERNIPALENTKELHEADLSCVEEPIIKNSTMVVCTNIDDKQAAEVSITKDLDSLDTVRDLTETNRNSVKQQLEMTVGQDSKSDISLDIDMKSNRNDDCMDKWTGLSDPISNHSFGHGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTSLACVEIVNTLSLENQEKLSKPHSINIVPRYKHSSAFVSDSENSHTTPPILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPRHIIQNNPFEMPENQVTVLNTTSEEWKDVDHPTVNTPSVSQVDSSKKYESIVRGKQKFACLLKTNCNKNASGYLADKNDLEFRGFYSARGTKLNVSSGALQKAMKLFSDVETISEEPSAEVDPRSISLSKCNDSVVSMFKIENYNDKDLNEKNNKCQPILKNSIEVTTGIFVENTEDYKRNAENEDNKCTETSRNICNLGEFDGDESSKNDTVYIHEDESGLPCIDQHNIYLKLPGQFMKEERTQIKEGLSDLTCLEVVKAEETFHVNTSNKEQLTANKMGQNIKDFDIFDLSFQTASGKNIRVSKESLNKVVNFFDQKYTEKELYNFSDSLNSELLSGININKIDVSSCEETDMVKDKILKERNPVDTENQLLTLQQGSECEIEKIKELAMLGFHTASGKKVKIAKESLDKVRNLFDEQNQNSNSEITNFSHRGAKPLKDREECKGLELGCETVEITAPKYEEMQNSLEEEKLVSSEIALSPRLLSDDLYKQTENLKTSNNISLKVKVHENLGKETAKSPTTCYTNQSTCLDVENSALTFYTGCGRKISVSQTSLFEAKKWLREGELDDESEKIRYLQDYVGNPSCRNHSNGIITGNYKNHLSEKEDSTYLSNSSMSNSCLYHSDFCHSNEVYNKSESLSKSKTDNSGIEPVVKNVKDRKNTSFSEVISTIREANSYPQTVNEDICVQKLVPNSSPCKNKNTAIKVTTSDSNNFETGVPAFSTASGKIVFASHETKVRGRFTDNGSKIIKQNTESKSGTCQTKIVASSHKALDDSEVVIFSNSPDTEEHSMCSNKVFAEIQSEQILQHNQNISGLEKVSEISPCQINLKTSNICKFDMGKLPKSIASVNACGIFSTASGKSVQVSDAALQKARQVFSKIEDGDNQLFSKVSLKNNKEHSDKFTREENTMIHSPQNLLSSAFSGFSTASGKQVPVSESALCKVKGMLEEFDIIRTECSHQHSPTCEQDKLKILPLSCIDKRTPEHSVNSKTEKAYSKEFKLSSKYIIESGSSENSCSVKVSPYLPQFKQDKQQLGLGAKVSLVENIHLLGKEQALPKNVKMEIGETNLPVKTNTEVCSTYSKDPENCFETEAVEIAKAFMEDGELTDSELLSNTKHSLFTCQNNEEMISLNSRTGKRRGDALVSVGEPPIKRDLLNEFDRIMENQEKSLTASKSTPDGTIKDRRLFMHHISLEPVTCGPFCTTKERQEIQKPNFTAPGQEFLYNSHFYEHLTLEKSSSNLSVSGQPFYKAPATRNEKRRHSLTTGKPRKIFVPPFKTKSHFHRDECCVSRNTQLEENKLNQKNIDEHGSGDRENNINDGETCQLNKSSSNQAATMIFTKWEEEPLDLITNLQNARDTQDMRIKKKQKQHIFPQPGSLYLAKTSSVPRISLKAAVGGHVPSAYSHKQLYMFGVSKHCVKINSKNAGSFQFLTQDYFGKEALLAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIVWKLAAMEFAFPKEFANRCLTPERVLLQLNQLYDIEIDRSRRSAIKKIMERDDTAAKRLVLCVSEIISSSTDISETSSSKTRSVDTKKADIIELTDGWYAIKAHLDPPLLALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFFPDPRPFPLPLSSLFSDGGSVGCVDVIIQRAYPIQWVEKTSAGSYIFRNEREEEKEAIKYAEAQQKKLEALFTKIQVEFEEHEESIAKQCTPSRALTRQQVRALQDGAELYEAVKSAPDPSYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAVESSGQGEQILSRDVTTVWKLRIISYEKKQKDSVLLSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSRSERANIHLTATKKTRYQQLPASDEILFQVYQPREPLHFNKLLNPDFQPPCSEVDVIGFVVSVVKKIGLSPLVYLSDECHNFLAIKFWIDLNEDFIKPHMLIVASNLQWRPESNSGIPTLFAGDFSTFSASPKEGHFQETFHKMKNTMENIDIFCNDAENKLMHVLNANDAKWSTPTKDYTSEPHTAQTVLGMGNKFLMSSPNSEMNYQSPLSLCKPKGKSVSTPLSAPMTLKSCKEEMEIDDPKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKGLNSPEMTPLKKVNDISLLEGDSIADEELALINTQALLSGSAGENQLMSISESTRTTPTCSQDCLGLKRHCSTSVVKEQEKSQVSTKERETNTQDTRTVK</mol_seq> | |
550 </sequence> | |
551 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">equus_caballus</property> | |
552 </clade> | |
553 <clade branch_length="0.015307"> | |
554 <confidence type="bootstrap">9</confidence> | |
555 <taxonomy> | |
556 <id>91561</id> | |
557 <scientific_name>Cetartiodactyla</scientific_name> | |
558 </taxonomy> | |
559 <clade branch_length="0.052959"> | |
560 <name>ENSVPAG00000000886</name> | |
561 <taxonomy> | |
562 <id>30538</id> | |
563 <scientific_name>Vicugna pacos</scientific_name> | |
564 </taxonomy> | |
565 <sequence> | |
566 <accession source="Ensembl">ENSVPAP00000000821</accession> | |
567 <name>BRCA2-201</name> | |
568 <location>GeneScaffold_1422:28074-80684</location> | |
569 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELSSEAPPYNSEPSEESEYKISSYEPNLFKTPQRKPYHHLASTPIIFKEQGPTLPLYQSPLKEQGKFRLDLGKDVTNSKHKSFCTMKAKVDQANDVTSPPPNSCLSESPVLQYTHETPQREKSVICTLFHTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEEASAATFPSDTTAILKGCFSNHDQSLKKNDRFIPSGPDNENQRKAKSHELEKILEESFGNGNSCKDHFEKSMPNVLEDEVHETAADISEEDSFPVCVSKYKRRNIRKVKTGKTRKNIFNKTKTNEYEEAEKQMTENKHSFVSEMGPNDSDPLDSNVTNQKLFGNGADKISQEVIPSSASEWSQLTLSGLNGTQMEKTSLLHISSCDQNNSEEDCIGTEKEFINFITSENYLPHISSLSKTVKILNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFKEEEASKSGLEIQTICSHKEDSLCTSSVDNGSWPATTKNTSVALKNAGLISTLKKKTKRFIYAINDKTSYQGLKMQRDQESELTHSSAQLEADHFETPLTFTNIDSGLLHSSIQKHCLQNDSEDPPLSLTSSFGTILRKCNNKIVSQDLDYKEAKFSKEKLESFPTETDYMSCQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEDCSDTHFQSQELLHDNDNTTVLTTVFNDLSNPVVISRGKESYKMSEKIKPKNSEAGSELTKNISLENSQEACILKEDSRKPELFSPEQYVTAASPLTKIQFNENTNLTVFQKKQETTLISKITVNSNSEELFPDNENNFVFQITSEKSIPILENTKELHEADIICLREPVLKNSATAARTDLGDKQAAKVSITNNFVSSNTVHDLTEKSRNSVKQQPKMTLSQDSKSDVSLDINMKSNRNNDCMDKWARLSDSISSHSFGNGFRTASNKEIKLSEHNIKKSKMFFKDIEEHFPTSLACIETVNTLSLKSQKKPSRPHAVDSQSMNTISGCVQNSAFICDSENSHTAPILSLKEDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSDIIQNNPFEMPENQMSVLKTTSEEWKDVDLPLTVNVPSSSQVDSSKEFEDRVGDKQKFACLSTTNCNKSTSGNSTDKNEVEFRGFYSARGTKLSISSEALQKAMKLFSDIENVGGTPAEVDPRIFSLSKCNNSDVSEFKEEDYSNDKNLSEKNNKCQLVVQNNIEMTAGIFVEENTEDYKRNTENEDNECIGFVCNLRESDGGSSSKNDTVSIHKDEDVLPCTDQHNMYLKSSRQYMMEGNSQNKEDLSDLTCLEVVKAEETFHVNMSNKSQSTANKMRQNIKNFDTFGLSFQTASGKNISISKESLNKVVNFFDEKCTEEEMNNFSDSSNSELLSGINTNKIDISSHEELDKVKDKILKESDSIGIENQLLTLQQGQEYEIKKIKEPTMLGFHTASGKKVKIVKESLDKVKNLFDEKKQDNSEVTNFSHQGAKTLMDREVCKEGFELACETVDVTAQKHEEMQNSLEEKKLVSEESAVPPWLLSDHLYRQTENLSITNSISLKVKVHENIEETAKSPMTCYTNQPTCSAIENSALAFYTGHGRKISVSQASLFEAKKWLREGELDDQTEKKNSADYVGNLSCGNHSNRITTENDKNFSEEQDPTYLSNSMSNSYSCHSDFCHSSEVFNKSEYLSKNKMGNSGIEPVVQNVKDRKNISFSEVMSTVREANTYPQAVDESTCVQKLVTNSSPCRNKNTATEMVISDSNNFEIEPPAFGTASDKTKVRERLTDNGGKVIKQNTESKSDTCQTKIVTGSHKALEDSEDITFPDSPESEEHRMRSHDVSPDIQSEPILCHDPGMSGLEKVSEIPPFHINLKTSDICKLNVEKHPRSVSSMNACGVFSTASGKSVHISDAAFQKAKQVFSKIEDDAKQLLSKVSFKSNEEQSDKFSGENTKIHTPQNLLSSAFSGFSTASGKQVPVSESSLCKVKGMFEEFDLIRTERSLQHSPTSRQNESKILPLSCIDKRTPEHSVSSKAEKDYSKEFKLSNNRNVESDSSENNHSIKVFPSLIQCKQDKQQLVLGTKVLLVENFDLLGKEQILPKNIKMEIGKAETFPNLPVKTNTEICSTNSKDLENYFETEAVDIARAFMEDGELTDSELLSHAKHSLFTCQKNEEAVLLNSGIGKRRGGALATVGEPPTKRNLLNEFDRIIENQEKSLKPSKSTPDGTVKDRRLFMHHTSLEPVTCGPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQKNIDERSSGDSENNGSEIHQLNKSNSNQTAAVMFTKGDKEPLDLITNLQNARDIQDKQIKKKQKQRIFPQPGSLYLAKTSTMPRISLKVAVEGRVPSACSHKQYMYGVSKHCVKINSKSAESFQFHTQDYFGKEGLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPQLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLFQLKYRYDVEIDRSRRSAIKKIMEKDDTAAKTLVLCVSEIASLSTDTSETPSSKTSGVDTTKAAVVELTDGWYAIKAQTDPPLSALIKNGRLTVGQKVIIHGAELVGSPDACTPLEAPESLMLKISTNSTRPARWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDIIVQRAYPIQWMEKTPSGLYIFRNEREEEKEATKHAEAQQKKLEALFTKLQAEFEEHEDNVTERYIPPRALTRQQVRALQDGAELYEAVKNAADPGYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQGEQILPRDVTTVWKLRIISYKKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLAASKSKSKSERANIQLTATKKTQYQQLPASDEILFQVYQPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPEYKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSPSEMKYQSPLSLSKPKGKSISTPVSAQMTSKSCCKGEKEIDDPKSCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTRYETPIKKKELNSPQMTLLKKFNDISLLEDDSIADEELALINTQALLSGSSGEDQRMSINESTRTAPTSAEDHLTLKRHYTTRGIKERENSQARTEEHETNMQDTSTKKYLQ</mol_seq> | |
570 </sequence> | |
571 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">vicugna_pacos</property> | |
572 </clade> | |
573 <clade branch_length="0.007047"> | |
574 <confidence type="bootstrap">2</confidence> | |
575 <taxonomy> | |
576 <id>91561</id> | |
577 <scientific_name>Cetartiodactyla</scientific_name> | |
578 </taxonomy> | |
579 <clade branch_length="0.034189"> | |
580 <name>ENSTTRG00000010541</name> | |
581 <taxonomy> | |
582 <id>9739</id> | |
583 <scientific_name>Tursiops truncatus</scientific_name> | |
584 </taxonomy> | |
585 <sequence> | |
586 <accession source="Ensembl">ENSTTRP00000010004</accession> | |
587 <name>BRCA2-201</name> | |
588 <location>GeneScaffold_3256:41151-92800</location> | |
589 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELSSEAPPYNSEPLEESEYKISSYETNPFKTPQRKPYHQLASTPIIFKERGLTLPLYQSPLNELDKFRLDSGKDIASGKHKSCCTTKVKMNQVNDVTSPPPNSSLSESPVILRCTHVTPQREKSVICGSLFHTPKLMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTLSSTVLIVRDEEASATVFPNDSTASKSYSSHDESKKNITISGPDSENKNQTEAKTHGLEKMLEDSFGKVNSCKDHFEKSMPYVLEDEVCETVADISEEDSFPVCVSKYKTRNLQKIKTGKTRKNIFNETKTDEYEEAKIQMTENKHSFVPEMEPNDSDPLDSNVINQKPPGNGTDKISREIVPSSASEWSHLTLSGLNGTQMEKTSLLHISSSDQNNSEDIIGTEKERTNFITLENSLLHISSISETVKILNEETVVKKRDEGQCLESREDSTVVGKQALSDSSLIASPLQGIKKSVFRIRESPEKTFRADFSNNMTDANFKKEPEASKSGSEVQTVCSQKEDSLHTSSVDNGSWPATTKHTSVALKNAGLISSLKKKTKKFIYAICDETSYQGLKMQKDQESELTNSSVQFEAKPLEAPHTFTNVDSGLLHSSVKKNCLQNDSEEPALSVTSSFGTIMRKCSNNESSSNNNKTISQDLDYKEAKINKEKLQSFITTETGYVSCLQEKHCEDDPKSQRVSDIKEKVLPAVFQPALPHSEECNDILFQSQESFLHGHDNTTILTRSSKDLLSNPVVISRGKESYKMSEKIKSENCEAGFELTKSISMEKNQETCVVNENSKKAELLSPEKYITEASPSMKVQFNQNTNLTVIQKDQEETTLISKLTVPPNSEELFPDKENNFVFQTTTERNIPVLGNIKEVHEADLSCLREAVPENSAIVACTDIDDGQAAKVSITKDFGSSDVVCDLAEKNRNSVKQPPIMTLGQDSKSDVSLDIDMKSNRNNDCMGKWAGLSDSISSHNFGRGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTSLACVEIVNTVSLENQKKGSRPHELDSQSVNTVSGYVQSSAVVSDSGNSHTTPLVLSLKGDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHMLQSNPFEMPENQITVLNTTSEEWKDVDLHLTINAPSLSQVGSSKKCKGIVGGKQKLACFSTTNCNKSASGYLTDKNEVEFRGFYSARGAKLNVSSEMQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXCNDSDVSMFNVENYNDTNLSEKNNECQLTLQNNIEMTTGIFVKEYTEDYRRNTENEDNKYTGFVCNLESDGNASSKNDTVYIRKDENGLPCIDQQNIHLKLSSQFMKEGNIQIKGLSDLTCLEVVKAEETFNVNMSNKKESATNKMRQNIKDFDVFDLSFQTASGKNIRVSKESLNKVVNFFDEKSAEELTNFSDSSNSELLSGININKIDISSHEETDMVKNKILKGGDPVGIKNQVLTLQQRPECEIKKIIEPAMLGFHTASGKKVKIAKESLDKVKNLFDEKKQNNSEITNFSHQGAKTLKDRELCKEGLELACETVEITAPKHEEMQYSLEEKRLVSETGMPPRFLSDHLYRQSENLKISNSISLRKVHENIEEETRKSPITCYTDQSTCSAIENSALAFYTGRGRKISVSQASLFEAKKWIREGELNNQLEKINSADCVGNPSCGNSSNSIITENDKNLSEKQDSTSLSNSMSNSYSYHSDFSHSNELFNKSEYLSKNKSHNSDIESVVRNVKDRKNTSFSEIISTVREANINPQAVDKDSCVQKLVTDSSPCKNTNTAVEVAISDSNNFETEQPALSIASDKIAFVSHETKVRERFTDNCRKVTKQNTESESGTGRKKIVTHSHKALGDSEDIIFPNSPDSEEHSMHSHEVFPDIQSEHLLQHDQSISGLEKVSKTPLCHINLKTSDKCKFNMGKCPKSVSSVNVCGIFSTASGKSVQVSDAALQKARQVFSKTEDSGKQLFPQVSFKSNEEHSNKFAREENTVIHTPQNLLSSAFSGFSTASGKQVPVSESAFCKVTGMFEEFDLIGTECSLQHSPPSRQDLSKILTLSCIDKRTSEHSVSSKTGKAYNEEFKLSNNYNIESGSSENNHAIKASPYLSQFKQDKQQLMSGTNVSHIDNIRLLGKEQALPKNIKMEIGKTETFPDFPMKTNTEVCSPNSKDPEKYFETEAVEIAKAFMEDDELTDSELLSHAKHSHFTCQKNKETVLINSGIGKRRGDALVTVGEPPIKRNLLNEFDRIIENQGKYLKASKSTPDGTMKDRRLFMHHISLEPVTCGPSCTSTERREMQNPNFTASGQEFLSKSHFSEHPTLEKSSSSLSVSGQPLCKVPAPRNEKRRHSTTTGKPMKVFVPPFKTKSHVHRDEQCVNRNTNFEENKQKQKNIDEHGSGDRENNVNDSEIHQTTAMLFTKGEEEPLDLITNLQTARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTMPRISLKVAVESRVPTACSHKQLYRYGVSKHCVKINSKNAESFQFHTQDYFGKESLWAGKGIQLADGGWLIPSNDGMAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLILCVSEIISLSTNISETSSSKINSMDTTKVAVVELTDGWYAIKAQVDPPLLALLKNSRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISANSTRPACWYAKLGFFSNPRPFPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSSGLYIFRNEREEEKEATKYAEAQQKKLEALFTKIQAEFEEHEENITERCIPSRVLTRQQVRALQDGAELYEAVKDSPDPSYLEGYFSEEQLRALNNHRQTLNDKKQAQIHVELRKAMESAEQGEQILPRDVTPVWKLRITSCKRKEKDSGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWLPESKSGIPTLFAGDFSMFSASPKEGHFRETFHKMKNTIENIDIFCNDAENKLIRILNTNNPKWSTPTKDYTSAPHTAQTVLGTGNKFLMSSPSSEMDYQSPLSLCKLKGKSVSTPAAAQMTSKSCCKGEKETDDPKTCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPMKKKELNSPQMTPLKKFNDISLLEGDSIADEELALINTQALLSGSAGENQLKSISESTRTTPTGPKDYLRLKRPYTASVVKEQGNSPAGTEEQKANMQDTSTENYIQ</mol_seq> | |
590 </sequence> | |
591 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tursiops_truncatus</property> | |
592 </clade> | |
593 <clade branch_length="0.001255"> | |
594 <confidence type="duplication_confidence_score">0.3333</confidence> | |
595 <taxonomy> | |
596 <id>91561</id> | |
597 <scientific_name>Cetartiodactyla</scientific_name> | |
598 </taxonomy> | |
599 <events> | |
600 <type>speciation_or_duplication</type> | |
601 <duplications>1</duplications> | |
602 </events> | |
603 <clade branch_length="0"> | |
604 <confidence type="bootstrap">8</confidence> | |
605 <taxonomy> | |
606 <id>91561</id> | |
607 <scientific_name>Cetartiodactyla</scientific_name> | |
608 </taxonomy> | |
609 <clade branch_length="0.123054"> | |
610 <name>ENSSSCG00000020961</name> | |
611 <taxonomy> | |
612 <id>9823</id> | |
613 <scientific_name>Sus scrofa</scientific_name> | |
614 </taxonomy> | |
615 <sequence> | |
616 <accession source="Ensembl">ENSSSCP00000022872</accession> | |
617 <location>GL894428.1:2554-22348</location> | |
618 <mol_seq is_aligned="0">IDLITNLQIARDIQDMRIKKKKRQRIFPQPGSLYXAKTSTLPRISLKEAVEGRVPSACSHKQLYMYGVSKHCIKINSKNAESFEFHTQDYFGTEGLCAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIALGTNITETRSNKTNSVDTTKVAMVELTDGWYAIKAQLDPPLSALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKVNSITAHSCFKKKKTKKTVTDSKNYIFLCVLFGGGGKSEIIIERYYILKVTIIQFLYLFPNLPTREHSSFRFSWSMFSSVLKFIVQLLSHAFFPLENAAERCLPSRALTRQQVRALQDGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQLLNDKKQAQIQLEFRKAMQSAEQGEQILPRDVTPVWKLRIISYNKKEKDSVILSIWRPSSDLCSLLTEGKRYRIYHLTAAKSKSKSERANIQLTATKSTQYQQLPASDEILFQLYRPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKTGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLVAASNLQWRPESKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIENIDIFCNEAENKRIHILNAYNAKWFTPTKDCTLEPQTPQTVLGTGNKFLMSSPSTEMNYQSPLSLYKPKGKSVSTPVSAQMTSKSCCKGEKEIEDPKNCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKHEIPIKKKQLNSPQMTPLKKFNDISLLEGDSIADEELALINTQALLSGSAEENQLTSISESTRTVSTSPKDYPRLKRHHTTS</mol_seq> | |
619 </sequence> | |
620 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sus_scrofa</property> | |
621 </clade> | |
622 <clade branch_length="0.045414"> | |
623 <confidence type="bootstrap">100</confidence> | |
624 <taxonomy> | |
625 <id>9895</id> | |
626 <scientific_name>Bovidae</scientific_name> | |
627 </taxonomy> | |
628 <clade branch_length="0.017264"> | |
629 <name>ENSOARG00000011179</name> | |
630 <taxonomy> | |
631 <id>9940</id> | |
632 <scientific_name>Ovis aries</scientific_name> | |
633 </taxonomy> | |
634 <sequence> | |
635 <accession source="Ensembl">ENSOARP00000011988</accession> | |
636 <name>BRCA2-201</name> | |
637 <location>10:28872321-28924433</location> | |
638 <mol_seq is_aligned="0">MPIGCKERPTFFDIFKTRCNKADLGPISLNWFEELSSEAPPCNSELSEELEYKISSYETNPFKTPQRKPYHQLASTPVIFKEQSLTLPLYQSPLKELHKFRSDSGKDIANSKHKSCCRVKAKINQANDVISPPPNSSLSESPVVLRCTYVTPQREKSVVCGSLFHTPKLIKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVQDEEASAAVFPSDTTTILKTYFSNHDESLKNSKFIPSGPDSDNKNQTEAESHGLEKILEDSFGKVSSCKDHFEKSLPNVLEDEVHETVAGISEEDSLPVCVSKYKTKKLQKTKTGKTRKNIFHETKTDDCEGAKKEMTESKHSFVCETEPNDSDPLDSNVINQKPAGNGTDIISREVVPSSVSEWSQLTLSSLNGTQVEKTSLLHISCDQTNSEEDFIGTEKDCTNFITLENSLPHISSISKIVKILNKETVVNKTDEGRCLESHEDPTTMGQQTLTDSSPLQGIKKSTFRIRESPEKILREDFSNNVTDTNLKEEPEDSKSESEIQTIYSQKEDFVCSSSGDNESWPATTKHTSEALKSTGLISTLKKKTKKFIYVINDKTTYQELKIQKDQESELTNSSAQFEAKPLEAPHTFTNVDSGSLHSSVQKNCSQNDSEEPSLSLTSSFGTVLRKCFNNESSSSNNQKISQDLYCKETNINKEKWQSFITTETDYVSCLQDKHCEDNPKSQGVSDIKEKVLPVVCRPELPHSEECSDTVFQFQESFLHDHENTTILTPSSKDLLSNPVVISRGKQSYKMSEKIKSKNCEAGFELTKYISMEKNQETCVLNENSKKPEMLSPEKYITGASPSVKVQCYQNMNLTVIHKDQEETTLISKRTVNPNSEELFPDNENNYIFQTTSERNIPILGNIKEIHEADLSCLKEPVLKNSVIVTSTDMDGGQAAKVSITKDSVSSNIVHDLIEKNRNSIKQQPKMTLGQDSKPDVSLDTDTRSNRNNFCGDKWAGLSDLTSGHSFGNGFRTASNKEIKLSEHNIKKSKTLFKDIEEHYPASLAWVESVKSLENQKKEGQPHDHDSQSIDTVCGYVQNGAVVSDGENSHTTPPVLSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHRLQSNPFEMPETQMPVSNTTSEEQKDVDLHLTASVPSLSHVDNSKKCGLVGHEQKLICLSTTKCNKSVSGSLTDKSEEEFKGFYSARGTKLNFSNEALQKAMKLFSDIEKVSEETPAEVDPGSFSSDQCNDSDVSMFKVENYSNDKNLSEENNKCQLILQSNFEMTTSIFVKENTEDFKRNTENKDNKCTDFVCNLGESDGCASSKNDTVYVHKDESGLPYTDQYNIHLKLSHHFMKEENIPIKEGLSDLTCLEVMKAEETFNKSDKKEPIANKMRQNIKDFGVFDLSFWTASRKNIRVSKESLNKVVNFFDEKCTEKEFNHFSDSSNSELLSGIHINKKDISSHEETSMFKNKMLKESSPAGIENQILTLQQREKCELKKIREPTMLGFHTASGKKVKIAKESLDKVKNLFDETKQDNSEVTGFIHQEAKMLKNKEVCKEGLDLACEIVKVTAPQHEEMQNSLEEKKLVSEETAMPPRFLSDHLHRQTENLHTSHSISLKVKVHENMEEETAKSPLSCYTNHSTFSAIDNSALAFYTGHGRKISVSQASLLEAQKWLREGELNDQPEKTNSSEIICLKEYTGDYVQNPSCGNSSNSIITENDKSLSQKQDSTSLNNNMPNSYSYHSDFCHSSEGFNKSEYLSKNKIDNSGIEPVVKNVKDRKNTSFSEVIPTIRETNINPQALDKDSCVLKLMTKFSPCKNKKTAVEVALSNSNNFETEPPAYSTASDQIAFVSGETTVRERFTDNCRNIYIKQNTETKSGTDQTKTVTESHKALGDSEDVIFPNSPDNEEHNMHSQDVSHDIQGEPILQHDQSTSGLEKVSEIPLRHVDLKTSDRCKFNMGNHPRSVSSMNACGIFNTASGKSVQVSDSALRKARQVFSKSEDSAKQLFSTVSFESNEHSDIFRRKDNIMAHNPPNLLSSAFSGFSTASGKHVPVSESALRKVKGMFEEFNLIETEYSLQHSPTSTQDISKILPVSCTDKRTPEHSLSSKMEKAYNKEFKLSNNYNTESGSSENNHSIKVSSYLSEFKQDQQQSVLGTRVSHIDNIHLTGKKQTLPKNIKKEIGKTETFPDLVKTNTEICSTDSKDPENYFETEAVEIAKAFMEDGELTDSEFPSHAKHSPLTCHKNEETVLSNSRIEKRKGDALITVGEPPIKRNLLNEFDRIIENQGKSLKASKSTPDGTMKDRRLFMHHFSLEPVTCGPSCVTTERQEIQNPNFTAPGQEFLSKSQFYEYLTLGKSSSNLSISGQPLCKVPDPRNEKRRHSITVGKPMKVFVPPFKTKSHIHRDEQFVGKNTNLENKQKQKNVDEHGSGDSENNVNNCETHQTTTIHFTKGEEEPLGSITNLQNARDIQDMRIRKKQRQRIFPQPGSLYLAKTSTMPRISLREAVEGRIPSVCSHKRLYMYGVSKHCVKINSKNAEAFQFHTQDYFGKEGLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPRLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDISEPSSNKTSSVDATKVAIIQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSTGLYIFRNEREEEKEATKYAEVQQKKLEALFTKIQAEFEDHEENVTEQCIPSRALTRQQVRALQDGAELYEAVKNAPDPSYFEGYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPRDVTPVWKLRIMSYKRKEKDSVILNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFSKLLDSDFQPPCSEVDLIGFVVSVVKKIGIAPLVYLSDECHNLLAIKFWIDLNEDIIKPHILIAASNLQWRPECKLGIPTLFAGDFSMFSASPKEGHFQEAFHKMKNTVENIDMFCEDAKNKLIRLLNASNPKWSTPTKDCTSAPPTAQTVLGSGNKFPLSSPSSEMNYQSPLSLCKLKEKSVCTPVSAQVTSKSCCKGEKETDDRKSCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPMKKKELTYPQMTPLENLNNISLLESDSIADEELALINTQALLSGSAGGNQLTSTSKSNRTVPTSPKDYVGLKRPYTTSVIKERENSPARTEEQETNMQDTSAIKNISKRLQRRLKPK</mol_seq> | |
639 </sequence> | |
640 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ovis_aries</property> | |
641 </clade> | |
642 <clade branch_length="0.011479"> | |
643 <name>ENSBTAG00000000988</name> | |
644 <taxonomy> | |
645 <id>9913</id> | |
646 <scientific_name>Bos taurus</scientific_name> | |
647 </taxonomy> | |
648 <sequence> | |
649 <accession source="Ensembl">ENSBTAP00000001311</accession> | |
650 <name>BRCA2-201</name> | |
651 <location>12:28637213-28688200</location> | |
652 <mol_seq is_aligned="0">MPIGCKERPTFFDIFKARCNKADLGPISLNWFEELSSEAPLCNSEPLEESEYKISSNETNPFKTPQRKPYHQLASTPVIFKEQSLTLPLYQSPLKELRKDIANSKHKSCCRVKAKINQANDVISPPPNSSLSESPVVLRCTHVTPQREKSVVCGSLFHTPKLIKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVQDEEASAAVFPRDTTAILKTYFSNHDESLKNNKFIPSGPDSDNKNQTKAESHGLEKMLEDSFGKVNSCKDRFEKSMPNVLEHEVHETVAGISEEDSLPVCVSKYKTKKLQKRKTGKSRKNIFHETKTDECEEAKKEMTESKHSFVSETEPNDSDPLDSNVIKQKPVGNGTDIISREVLPSSVSEWSQLTLSGLNGTQVQKTSLLHISSCDQTNSEEDLIGTEKECTNFITLENSLPHISSISKTVKILTDSSPLQDTKKSIFRIRESPEKIFREDFSNNVTDSNLKEEPEDSKSESEIQTIYSQKEDSVCSSSGDNESWPATTKYTSEALKNTGLISTLKKKTKKFIYVINDKTAYQGLKIQKDQESELTNSSAQFEAKPLEAPHTFTNVDSGSLPSSIQKKCSQNDSEEPTLSLTSSFGTVLRKCFNNESSSSTNKTISQDLYCKETNINKEKWQSFITTETDYVSCLQDKHCEDNPKSQGVSDIKEKVLPVVCRPELPHSEECSDTVFQFQESFLHDHDNTTILTPSSKDLLSNPVVIPRGKQSYKMSEKIKSKNCEAGFELTKYISMEDNQETCVLNENSKKAEMLSPEKYITGALPSVKVQCHQNMNLTVIHKDQEETTLISKRTVNPNSEELSPDSENNYIFQTTSERNIPILGNIKEVHEADLSCLREPVLKNSVRVTSTDMDGGQAAKVSITKDSVSSNTVHGLIEKNRNSVKQQSKMTLGQDSKPDVSLDTDTKSNRNNFCKDKWAGLSDLTSSHSFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPASLPWVEIVKSLENQRKGGQPRDRDSQSVDTVCGYVQSGAVVSDGENSHTTPPVLSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHILQSNPFEMPETQMTVLNTTSEEQKDVDLHLTASAPSLSHIDSSKKCEGLAGREQKMICLSTTNCNKSVSGSLTDKGEEEFRGFYSARGTKLNVSTEALQKAMKLFSDIEKVSEKTPAEVDPGSFSSNQCNNSDVSMFKVENYSNDKNLSEENNKCQLILQSNFEMTTSIFVKENTEDFKRNTENKDNKCVGFVCNLGESDGCASSKNDTVYVHKDESGLPYTDQYNIHLKLSHHFMKEENIPIKESLSDLTCLEVMKAEETFNKSNKKEPIANKMRQNIKDFGVFDLSFWTANGKNIRVSKESLNKVVNFFDEKCTEKELNNFSDSSNSELLSGININKIDISSHEETSMFKNKMLQESSPAGIENQILTLQQREKCEFKKIKEPTTLGFHTASGKKAKIAKESLDKVKNLFDETKQDNSEVTDFIHQGAKMLMDREVCKEGLDLACEIVKGTAPKHEEMQNSLEEKKLVSEETAMPPRFLSDHLQGQTENLHTSHSVSLKVKVHENMEEETAKSPITCYTNHSTCSAIENSALAFYTGHGRKISVSQASLLEAKKWLREGELNDQPEKINSSKIICLKEYTRDYVGNPSCGNSSNSITENDKSLSEKQDSTSLNNSMPNSYSYHSDFCHSSEGFNKSENLSKNKIDNSGIEPVVKNVKGRKNTSFSKVIPTIREANINPQAVDKDSCVLKLVTKFSPCKNKKTAAEVALSNSNNFETEPPAYSTASDQIAFVSRETTVRERFTDNCRNIYTKQNTEPKSGTDQTKTVTDSHKALGNSEDVIFPNSPDNEEHNMHSHDVSPDIQSEPILHDQSISGLEKVSEIPLRHVDLKTSDRCKFNMGKHPRSVSSMNACGIFNTASGKSVQVSDSALQKARQVFSKSEDSAKQFFSRVSFKSNEEHSDIFTRKENTMTHNPPNLLSSAFSGFSTASGKHVPVSESALCKVKGMFEEFDLIGTEYSLQHSPTSRQDVSKILPVSCTDKRTPEHSVSSKMEKAYNKEFKLSNNYNIESGSSENNHSIKVSSYLSEFKQDQQQSVLGTRVSHTDNIHLLGEKQTLPKYIKKEIGKTETFPDLVKTNTEICSTDSKDPENYFETEAVEIAKAFMEDGELTDSEFPSHAKHSPFTCQKNEETVLSNSRIEKRRGDALVTVGEPPIKRNLLNEFDRTIENQGKSLKASKSTPDGAMKDRRLFMHHISLEPVTCGPSCITTERQEIQTPNFTAPGQEFLSKSHFYEHLTLGKSSSNLSISGQPLCKVPDPRNEKRRHSITIGKPMKVFVPPFKTKSHIHRDEQFVGKNTNLEENKQQKNIDEHGSGDSENNVNNYSITNLQNARDIQDMRIRKKQRQCIFPQPGSLYLAKTSTMPRIPLREAVEGRIPSACSHKQLYMYGVSKHCVKINSKNAEAFQFHTQDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKKFANRCLNPERVLLQLKYRYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDISEPSSNKTSSVDTTKVAVVQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSTGLYIFRNEREEEKEATKYAEAQQKKLEALFTKIQAEFEDHEENVTEQCIPSRALTRQQVRALQDGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPRDVTPVWKLRIMSYKRKEKDSVILNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFNKLLDSDFQPPCSEVDLIGFVVSVVKKIGIVPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPGCKLGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTVENIDTFCEDAKNKLIRLLNASNPKWSTPTKDCTSAPPTAQTVLGSGNKFPLSSPSSEMNYQSPLSLCKLNEKSVCTPVSAQVTSKSCCKGEKETDDPKSCKKRRALDFLSRLPVPPPVSPICTFVSQAAQKAFQPPRSCGTKYETPMKKNELNSPQMTPRKKFNDISLLESDSIADEELALINTQALLSGSAGGNQLTSISKSTRTVPTSPKDYVGLKRPYTTSVIKERENSPARTEEQETNIPDTS</mol_seq> | |
653 </sequence> | |
654 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">bos_taurus</property> | |
655 </clade> | |
656 </clade> | |
657 </clade> | |
658 <clade branch_length="0.069764"> | |
659 <name>ENSSSCG00000029039</name> | |
660 <taxonomy> | |
661 <id>9823</id> | |
662 <scientific_name>Sus scrofa</scientific_name> | |
663 </taxonomy> | |
664 <sequence> | |
665 <accession source="Ensembl">ENSSSCP00000028073</accession> | |
666 <location>GL894447.1:46-18025</location> | |
667 <mol_seq is_aligned="0">LKSYFSNHDESLKKNNRFIPSGRDNENKNQREAKSHGLEKMLEDSFDKVDNCKDHLGKDELHETVADISEEDSFSLCVSKYKTRSLQKMKTGRTRKNIFNETNTYEYEEAKKQMTENKHSFVSETEPNDGDSLDSNVTSQTPFGNGTDNISKEFVPSSASEWSQLTLSGLNETQMEKTSLLHISSCDQNNAEEDCIGTDKECTNIITVENSLPHIASMSKTRTILNEVTVVNKRDEGQCVESPDDSTGVENQVISDSSLIASPLQGIKKSLFRMRESPEKTANADFPSNMTDPNLKEEPEASRSGLEIHTLCSQKEGSLCMHSADNGSWPATTKYTSVALKNTGLISTLKKKTKKFIYAINDRTSYQGLKAQKDQESELMNSSAQFEAKPFEAPHTFTNTDSVGLLHSSVQKNRLQDDSEERILSSASSLGTILRKCSNNESHSDNKTVSQDLDYKEAKIDKEKLPSFITTETDNVSCMQKKHCEDDPKSQRVLDIKEKVLPAGRHPAVPHSEEGRDTYFQSQENFLHDLDNTTILTPSSKDLLSNPVVTSGGKESYKMSEKIKSRNCKADFELTRNISMEKNQETCVLNDSSQKAELLAPEKYLTVVSPSMKVQLNQNINLTGIQKDQEETTLISKITVSPNSEELFPDNETNFVFQTPTKRNIPVLGNIMEVHEVDLSCLREPVLKNSALVTCTDIDDEQTAKGSMTKDFVSSTNRAHDLIEKNRTSVQQQPKIIQGQESKSHTSLDIDVXNRSNDCMDSWAGLSDLIASHSFGNGFRTASNKEIKLSEHNIKKSKLLFRDLEEHYPPSLACVETVNTLSLASQKKESKPHALDLPSVNTVSGCVQSSAILSDSENRHTTPPILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFKKPGHITQNSLCEMPANQMTVLNTPSEEWKDPALHLTSNAPSVSQAESSSKSEGIDGGKQKFACLSSSNCSRSASGYLADKNEVEFRGFYSARGTKLNVSRKALQKAMNLFSDIENVSEETSAAVGPGCFSSSKCNDSDVSIFKVENYSSDKSLSEKYNKCQLILKNNIERTADIFVEENTDGYKRNTENKDNKCTGLASNLGEADDSASSKTDTVYMHEDETGLPFIDHNIHLKLPNHFXTQIKEGLSDLTCLEVMRAEETFHINTSNKQSTVNKRSQKIKDFDVFDLSFQSASGKNIRVSKESLNKAVNFFDEKCTEEELNNFSDSSNSEILSGININKINISSHKETDSDKNKLLKESDPVGIENQLLTLQQRSECEIKKIEEPTMLGFHTASGKKVKIAKESLDKVKNLFDETKQDSSETTNSSHQGVKTQKDREVCKEELELTFETVEITASKHEEIRNFLEEKKLVSKEITMPPRLLRHHLHRQTENLSMSNSIPLKGKVHENMEEETSCHTDQSTCSAIENSALTFYTGHGRKISVNQASVFEAKKWLREGELDDQPENVDSAKEYARDYVGNPLCGSSSNSIITENDKNLPEKQNSTYLSNSVSNNYSYHSDFCHSNEVLSKSESLSENKIGNSDTEPAVKNVKDRKDTCFSEEISTVREANTHPQAVDEDSWVRKLVINSTPCKNKNTPGEVSRSNSNNFEKEPPAFSTSGNIAFVSHETDVRERFADNNRKAIKQNTESMSGSCQMKIMTGAHKALGDSEDVIFPNSPDSEEHITRSQEVFPEIQSEQILQHDPSVSGLEKVSEMPPCHINLKTFDIHKFDMKRHPMSVSSMNDCGVFSTASGKSVQVSDTALQKARQVFSKTEDVAKPFFSRAVKSDEEHSDKYTREENAMMHPPPNFLSTAFSGFSTASGKQVPVSESALCKVKGMFEEFDLMGTECRLQHSPTSRQDVSKILPLSEIDERTPEHSVSSQTEKAYNEQFKLPDSCNTESSSSENNHSVKVSPDLSRFKQDKQLVSGAKVSLVENIHHLGKEQALPKNITMEIGKTETFPNLPLKTNTEICSTKSKDPENSFETEAVEIARAFMEDGELTDSELPSHAKHSLSRQKNEETVLLTLGIGKRRGDALATVGEPPIKRNLLNEFDRIIENQEKFLKASKSTPDGTMKDRRLFMHHISLEPVTCGPACTTTERPKVRNPHFTAPGQGFLAESRLDEHLTLEKASSNLSVSGQPLCKAPAPRNEKRRHSLSTGKPMKVFVPPFKTKSHVHRDEQCVTGNTELEENKQKQKNVDEHGFGNSENNVNSGEIPQTTTVIFTKNEEEPLGIV</mol_seq> | |
668 </sequence> | |
669 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sus_scrofa</property> | |
670 </clade> | |
671 </clade> | |
672 </clade> | |
673 </clade> | |
674 </clade> | |
675 </clade> | |
676 </clade> | |
677 <clade branch_length="0.016812"> | |
678 <confidence type="bootstrap">20</confidence> | |
679 <taxonomy> | |
680 <id>9362</id> | |
681 <scientific_name>Insectivora</scientific_name> | |
682 </taxonomy> | |
683 <clade branch_length="0.120512"> | |
684 <name>ENSEEUG00000009739</name> | |
685 <taxonomy> | |
686 <id>9365</id> | |
687 <scientific_name>Erinaceus europaeus</scientific_name> | |
688 </taxonomy> | |
689 <sequence> | |
690 <accession source="Ensembl">ENSEEUP00000008968</accession> | |
691 <name>BRCA2-201</name> | |
692 <location>GeneScaffold_4361:961-62824</location> | |
693 <mol_seq is_aligned="0">MPVGCKERPTFFEIFKRRCNEADLGPISLNWFKELSSEAQPYNFEPAEESEYKAVSYEPTLFKTPQRKPQMVSTPVIFKEQNQPLCTSPSKELDKYRLNLGKDITNSKHKSYCTTKTKMDQACEIASPSLNSYLSESPVLRYTHGTPQREKSMICGSLFHTPRFMKGQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLIERDEEASAAVYPNDTTAILKSCFFNYDESLQKNGRFVHSGLENESKNLGESESHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLHSSVNNSEETTLFSANSLGMNLRKCSSNKTFSGNKIVSQDLDSKGEKIKKEKLHSYIATATDVSNLQQRHCADNPKNRVSDAEEKVLPSASHPAMPHSKVEYKDDHFQSQERLLYDHGSFSTLVPTAMVPPSSPAVNFRANESYKISKKLQNKEREAGVEVTTNTPMKKNEKKCVLNENFKKAEQLPPEQYRPLSPSVKVQVTQSSSLTLIQNDQEETLISNVIVNSNPEELFPESENSFHITGERSVPVLENIEELYVADLSSIKEPISENDTMVAFTDIVNKQEAKVLITKDFESSDVVHDVTEKRNSVKQKLNMTTSQDSKLDIFLDTNVNSDGSSEHMDRQTGLSNVISNHSFGNGFRTASNKKIKLSENNIKKSKMLFKDIEEQYPPNLACTEIVNNLGIQEKLSKPHGLDSQSTNTVSGCVQNGILVSTSENTHAVPPILSLKQDPNLNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHTQRNNQFEKPEKQMTVVNTSSEEWKDTGHLTVNAPSTNQVNSKKLESAAEGKQMFPCLLKTSYNKSPNSNYSTDKNKTEFRGFYSALGTKLNVSTTALQKAMKLFSDIDNISEEASAELDPGILFSDKYKDSVVSASKIENYNDENLNKQLTFQNSTGMTTGIFAIDNTDRCKRDKESEDNKHTCASRNICNIGEPDGNDSSTNDRVYIHKGENDLPHSDQHNAVLKLPSLLMMEDNTQIEGLSDLTCLEVVKAEETFCVNSSNKEQLTSKMGQNTKDPGIFHLSFHTASGKNIRVSKESLSKVVHFFDEKYTEEELNSFSENMDADFISDINMNKTDILSHVETDMVKDKILIGHDPNNTKNHLLTLQQQPECEKRMINEPTILGFHTASGKEVKVAKDSSEKVKNLFDEKKKGSTSEISNIKCPAAAAVGERDDCKERLELACEAAGITVTKYKHVQKSLEEKKVISHEISDNLHTQAENLRTPNNISPKVKQCETIEMDTVRTSTCSTIENSTIAFYTGHGRKISVTQVSLLKAKKWLHEGESNDEPEEENAVNYVGNPLSRNSSKSILTENQLSEKQDSTYLSNRKMYNRYLYHSDFCHSNEAHSKSEYLSENEIGNSDIEPVLENVKARENSSSSEIITVREGSTYPQTVNEDMCVLKLNSSSPCINKSTANQLTVSDLKTFEIGPPSGKTDFAAHEKERLTDSCSKVINQNIDNKPGSYQTNFVADYHKALGDVNDISPKECSVHSLKVFADSQDKQVLQHNQSMPELEKVPEIPPCKFNLKLYMCKFNMVKFSKSVSSTNTGGIFSTASGKSVQVSDAALQKARKVFSKLEEDSADQLLSKESLKNSEHSDNLTRDKSTVVHTPQSKSSTICGFSTASGKQVSISKSALNKVKGMLEEFDLIGAECSLRHSPTSGQDILKISLSCNDKSTPEHSVNSKTEKACNKEFKLSSNCNIRSDSSEDTHFTDVSPYLSPFKQDKQQLELGTTISVIEKNSHPLEKEQALPQNTKIELSKTETYLPQKANTEVCSAYSKDPENYFETEAVEIAKAFMEDGELTDSELLSHDKHSSFTCNEHEEAGTQNSGSGKRKRDALVSVGEPPIKRNLLNEFDRIIENERKSLKASKSTPQXXXXXXXXXXXXXXXXXXXXXXXXTPDGEKQSPNFTAPTQEFPSKSHFCELLTVEKSSSNLGISEQPFHNAPARNERRHSITTSKLMKVFVPPFKTKAHFHRTEESDLEENKNEPKSTNEHRSGDSENNINESEIHQLNKNDSSQTTTLIFTKCEEPLDLITALENARDMQDIRIKEKQKQHIYPQPGSLYLTKTSTMPRISLKTAVGGQVPSVHSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVNPNLISRLWVYNHYRWIIWKLAALEFAFPKEFANRCLTPERVLLQLKYRYDVEIDKSRRSAIRKIMERDDTAAKTLVLCVSQIISSSTNISETSSSKTSSIGAKNVTTIELTDGWYAIKAQLDLPLLALIKNGRLTVGQKIIVHGAELVGSPDACTPLEAPDSLMLKISANSTRPACWYAKLGFFLDPRPFPLPMYSLFSDGGNVGCVDVIIQRVYPIQWVEKTSSGLYIFRSEREEEKEAAKFAEAQQKKLEAIFTKIQAEFEAHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSEEQFRALNNHRQMLNDKKYTQMQLEFRKAMESAEQDKQILSRDVKMVWKLRIVTYGKKEDSVILSIWHPLSDLYSSLTEGKRYRIYYLATSHSKSKSERASVQLTATKKTQYQQLPASDEFLFQVYQPRESLHFNKLLDPDFQPPCSEVDLVGFVVSIVKKKGLAPLIYLSDECHNLLAIKFWIDLNEDIIKPHTLITASNLQWRAEAPSRMPTLLAGDFSIFSASPKEGHFQEAFHKMNTIEDIDTFCSEAENKLMYILNANDLKWSTPTKDYTSERHTTQTILDTGNKFLLSPANSGMNHQSPLPLCKSKGKSVSIPMSAQRTPQKETDDPKHCRKRKALDFLSRLPLPPPVSPVCTFVSPAAQKAFQPPRRCGTKYEMPVRKKESNSLQVNPLKNLNISLSESDSIADEELALINTQALLSDSGGENQLLSISERTKTIATSSKGNRLKRHYTSPVSKKQENSQASEEEQKTSVQDTSIKKHI</mol_seq> | |
694 </sequence> | |
695 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">erinaceus_europaeus</property> | |
696 </clade> | |
697 <clade branch_length="0.129791"> | |
698 <name>ENSSARG00000002755</name> | |
699 <taxonomy> | |
700 <id>42254</id> | |
701 <scientific_name>Sorex araneus</scientific_name> | |
702 </taxonomy> | |
703 <sequence> | |
704 <accession source="Ensembl">ENSSARP00000002541</accession> | |
705 <name>BRCA2-201</name> | |
706 <location>GeneScaffold_591:245736-329655</location> | |
707 <mol_seq is_aligned="0">MPVGCKERPSFWEIFQTRCNQADLGPISLNWFEELSLEAPPYNSEIIFPVEESEYKTNSHEPSLFKTPQRKPYQLASTPIIFKEQGLNLPLNQSPSRELHKYRLLLGKDNKHQGYCTVKTKLNHTNEVTSPLPNTCLNESPVGLHCTHVTPQREKSVVCGSLFHTPKLIKGQTPRRISESLGAEVDSDMSWSSSLATPPTLSSTVLIVKEEESRTAVFPNDTAAVLKSYFSNYDECLRKNNRIISSGPINESSQKETTSQELGEIQDNSSWKVNNHKDQFGKSVPNVLKDEIHETVSDVSEEDSFSLYVSKYKTRNLRKIKIGKSRKNIFSESNMNEYEEPKQQLEKNKHLFVSEVEPNYNIPSNTSVTTQKLFGNGSDEISKETVLSSGSQRVQLTPSGENGIQMKKMPTLYTSSCGQSNSAKDCIDTEKDCTSFIILENLLPEILDTSKTENVVDEETVVNKGDVGHCLISHEDSTPVTKPTVANTSLVESPHEGIKKSVFRIRESTEEPLSEVFSNNITDPNFKEETKDSEKELEVNAICLQKEDSLCPNLVDNGSQPASIEHTSAALKSEGLISTLKKKKKKFIYAINDETTCQGEKLLKDRASQLSNYSTQFEANTFEVPLTVTNTDSGLMPFSSKKITEEPAFSLNSSYEVNLRKCSSNESSSSKTKRLPQVLDDKKLQSCIITEAAYFSSLQEQHCMDNPKSHSVSDIKEDFPITYHPGAPNSEVDCSSMLFPSQERFLYDHGNTSILTPNPRAIPSKPAMVSIVKKSNKMPEKLKSKNCEADFELTNNIPMEMSRLCVFSENSQKTELLISKNDITASSIEIQVNENPDSTVIQKDQEETTLISNITINSNSEELFPEYGNNFVFQMTNERKIPALENIEEPYEADLSCVEESILKNSTLIAYGDLDDKQTAKVLIAEDFSSSVIHDFTENINSIKQQVSRTLGQDSESDILNIEVKSNRNNEYVDKQTVSSAPVLDQNFGKGFRTASNKEIKLSEHNVQKSKMLFRDIEEQYPTSFACAEITNTLSSDVEKKQSKPLVLDSQSNNNVSRYVQNSAFASSSKNSHKIPPVLSLKLCLSSNNNLTPSQKAEVNELSTILEESGSQFEFTQFRDPDHIEQNYPLEASENHMILSSTTCEECKDSHHDALNSPSTSQVNSKKYKDTFGDKQNFAHLLKTSCTKNASGCLTDKEVEFKGFYSALGSKLTVSNKALQKAMKLFSDIEKISEETSAELDSESLFSSKYGSIRTENYTSDNINTENKCQLILQNNVEMTTDIFVENTKDYKREKENEDRYIGASINICNIGKSHCSDTSKNDTDSNKNDFPCNNQRNKCLKLSGPCMKEGSIQIKEGLSDLTCLEVVKTEELFYINTSSKEQLTVKKMVPNTKDFYSCDVYFQTASGKNITVSKESLSKVVNLFDEKCTEEESDNLPSSLNSELFSTKHMKKSISSHEETAKIEDKILKEKEPVGNKNQLTLQEQAERETEKSKEPFILGFHTASGKKVKVAKESLDKVKNLFDEEKQCIGEIINTNHEGLKTLKDREEPEVTCETIEIIVPKCEEREKSPEEKRLIPNETAVPPGLLSDHLHTQRENLKISNSISLKVKAHEDTEKQQAEVPITCSTNQSTCSVTGNSTLAFYTGHGRKISVSQASLFEAKKCLREGKLDDQPEAINAAGYVGSPLSENSSSCILTGKSHLSGRKDSAYLSKRSMSNSSSYSESSHSNEVYSKSELLSKNKVDHSGIEPVMKDAKDEKDSSFPEVVSTLREANIYPQTVNGDIYAKKLSNCSPCNNKDAANKLAFSDYFETESPSADGEKDFVSHDTEEIRERLVDSYSKVIKQNSASTSGTCQTKIVAGCHEVLDDLKDPLFSKSLDEECNMHSHKVFTDDQSEQSLQQNQNKSELEKVSKKSPCQLNWKTSDICKLNVGNFSSSVSFKNACGIFSTASGKAVQVSDASLQKARQVFSKVEDNADQPFSEVFKNNREHSDKYTKEKSTVIHSASKSLPAFSGFSTASGRKVSISESALNKVKGMLEEFDSIRTECGLQHSPPSRPDASEILPFSYVAKNTSEDLVNTTMESAYRNKFNHSDNYSIESDSSENSHLTTVLPSLSEFKQDKQQLILGIKASVVENIHCLGEKAIPESTERKIDKTETFSNLPVKTTTELRSTYSGDPGNYLETEAVAIADAFMEDGELTDSELLCHAKHEETISLNSSIGKRRGDASVSVGEPPIKRNLLNEFDRVMEKQEKSLKALKSTPEGTMKDRRLCMHHVSLEPITCGPPCATKKLQEKQSPNFTAPGQEFMSKSQFYEFNLTLEKSSNLSVSEKLFYEVPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYMFGISKHCLKINIKNAESFQFHIQDYFGKKDLWAEKGIQLADGGYLIPSNDGKAGKEEFYRALCDTPGVDPKLISRLWVYNHYKWIIWKLAAMEFAFPEEFANRCLSPERVLLQLKYRYDMEIDRNRRSAIKKIMEKDDTAAKTLILCVSGITSSGTNIPEASTSKNNSVDTKTVTLIELTDGWYAIKAQLDPPLLALLKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARKRCIPSHALTRQQIHALQDGAELYEAVKNAPDPGDLEGYFTEEQLKALNNHRQILNDKKQAQIQLEFKKAMESTEQEEQILSRDVKTVWKLRIISYEKKEKDSVLLSIWRPSSDLYSLLTEGKRYRIYQLITSKSKSKSERTKMQLTATKKTQYQQLMTSDELLFQVYQPRTSVPFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLLPLVYLSDECHNLLAVKFWIDVNEDIIKPRMLIAASNLQWRPESKSRIPTLFAGDFSMFSANPREEHFQETFHKVKNSVENIDVFCSDAENKLMHMLNADDPKWSTPTKDYTSEPHTVQPVLDTGSKCLMSPISYQSPLLLCKTKGKSVSTPVSAQMTSKFCCQKETDDPKTCKKRRALDFLSRLPLPPPVSPMCTFVSPAAQKAFQPPRRCGIKLNETPIKKLSLNSPQMTPLKKFNDSSFLESDSIADEELALINTQALVSGPAENQLMSTKSARTAPSCSKESLRLKRHHTATAVKDQEDSCDSMEERDISAKKYF</mol_seq> | |
708 </sequence> | |
709 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sorex_araneus</property> | |
710 </clade> | |
711 </clade> | |
712 </clade> | |
713 <clade branch_length="0.008989"> | |
714 <confidence type="bootstrap">2</confidence> | |
715 <taxonomy> | |
716 <id>314146</id> | |
717 <scientific_name>Euarchontoglires</scientific_name> | |
718 </taxonomy> | |
719 <clade branch_length="0.004454"> | |
720 <confidence type="bootstrap">8</confidence> | |
721 <taxonomy> | |
722 <id>314147</id> | |
723 <scientific_name>Glires</scientific_name> | |
724 </taxonomy> | |
725 <clade branch_length="0.05329"> | |
726 <confidence type="bootstrap">100</confidence> | |
727 <taxonomy> | |
728 <id>9975</id> | |
729 <scientific_name>Lagomorpha</scientific_name> | |
730 </taxonomy> | |
731 <clade branch_length="0.050845"> | |
732 <name>ENSOCUG00000016878</name> | |
733 <taxonomy> | |
734 <id>9986</id> | |
735 <scientific_name>Oryctolagus cuniculus</scientific_name> | |
736 </taxonomy> | |
737 <sequence> | |
738 <accession source="Ensembl">ENSOCUP00000014514</accession> | |
739 <name>BRCA2-201</name> | |
740 <location>GL018702:3042658-3113023</location> | |
741 <mol_seq is_aligned="0">MPIGSKERPTLFDIFKMRCNTTVDLGPISLNWFEELSSEAPLYNSEPAEESECKINNCEPNLFKTPQRKLSYHQLASTPIIFKDQGPSLQLYQSPLKELDKYRSDSGKDTANNARKSCCTMKSKIDQANDVASPLINSYLSESPVLQYTNVTPQRKKSVVCGSLFHTPKLMKGQTQKHISESLGAEMDSDMSWSSSLATPPTLSSTVLIVRDEEASETVDTNAILKNHFSNDESMNKNGRFIPSVTESENKNQREARSQRLRKVLGNSFGKVNSCKDHFGKSMPNVLEDEVCESVANISEEDSFSFCFSEYKMENLKELKSEKTTEKNIYETKTDTYDEAEEQMKENKHSFAFEIEAKNSDPLDSNLTIQKPLESGNDKVSKELVQSEWSQLSVSGLNEIQIEKISMVHVSSCDQHNSEKDLIDTEKSCINFITPENSLSHISGLPKLEKILNEETVVHKRDERQHVESHDSILGAKPTTSEISPVVSPFQGIKKSLFKIRESAEETLGTVFLGDMSNSDLNETAEIPEREMETHAFYSQKENSLCESFVDDGSRPATVTHSSVTLKNASLISTLKKKTKKFIYAVKDEGKKIQEDQNSELTNCSAQFEANTLDVPLVFTNADSGLLHSSVRRNCLQVDSEEQTLSKTNSFGTILRKYSNDENSSNNAVTSQDLNYKEAKLNKEKLPSLITPETDYLSCLQERQREDNLKGQQVSNIRAKIVSSAYHPAIQHLEMECNSTYSQSQNGFLDNHDNTNTCILTPSSKDLASNSAVISGEKESYKMSEETKYRNCESDVELTKNSPIEKNQEMWGLSENFKKAELLPLEKHVIITSPPMKVQFNKITNLTVIQQDQEETTLISEITVNSNSEELFPDNENSFVFQRTNERNNPVSGNTEERNEIDLNYMEESNLQNSTMVVHEDIDDKQTTQVLIAKDSDSSNMVHDLIEENRNTVTQHLKMTLGQDLKSGIPLDIHMKSNGNNDYMDRWSGLLDPISNHSFGGSFRTASNKEIKLSEHKINKSKMLFKDIEEQYPTSLACVETLNTVSLDNQKKLRKPDIFDSQSNNAISAYMQNSAFVSDCENNHTATQVLSLKQDLNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHITQGDTFEVPENQMTILNTTSEECKDGNHHLSINVSSLGQVERSKKFEDAVGTEHKFACSLKNNCNKSATYLTDENEVVFRGFYSALGTRLNVSSEALQKAVKLFSDIESISQETSAEVYPRSFPSDKCHDSIASVIKVENHNNDQNLSEKNNKCQLISQNDSEVTPDVFGNENTENYKRNTEDEDNDRNKLRESDVSDSRKNYTVDIHTNENDLQCINQHAQFVKEENTQIKESLSDLTCLEVVKAEEIRHINTSNEEELTTDTTEQNVKAVGIFDISFQTAAGRNIKVSKESLNKVVNFFDKETEEELNNFSNCLKSKLLCDMNKNKVDFSSHEEPDIVKNKIFKESIPVSTENQLLIVQQQPECGIEKIKEPTLLGFHTASGKKVKITKESFDKVKNLFDEKQDSEIASFIHQGANTLKDMENCKEGLELALDAIEITVPKCEEIQNYLDCNDKNFAFSDTRLLPRLSDNLHRQTKSLRTNSISLKIKIHENTEKEALGNATGCFPNQSLTIENSDLAFYTGHGKEVSVSQASLFEAKKWLREGELEDQSEKNAAKKYPDSYVGNPSYENSSNSIITQSDKNPLSGKQDSPYLSNSVSNSYSCHSDEIHNHSEYPSKNKIASGLEPLVKNVDQNTKVIPSVREEATCPQTINEDTCDPKCVTDSSSCRNKEKAIRLTVSHSDNSKVGPPIFSTASGKTVCVSHEAIKKVKEILIDDYSEVIKPNTESKSDTSQTKTLTLLEDSKDIFPNSIENGGYNMYSHKVFADIENEQILQHNQSMSGLEKVSDMSPCHVSLKTSDVCNFNLGEHPQSVSYTNSGVFSTASGKSVHVSDASLQKAKEMFSETEDSAEQLFSKVSFKSKECSDQFTREENSMTDIPKNLLSSQKDFSNNVINSFAFSGFSTASGKQVSISESALQKVKGMLEEFDLIRTECSLQDSPTCKQSVSKVTPPPCVDKRTPEYSVNFKRGNTCSEKFELSGNSNSKSGSSENQCIKVSPYISEFKENEQQLVLGTRVPLVENTCPLRKKRASPKNVKMETGKTEIFSSPVRTNREVCFAYSKDPEKYFETEAVEIAKAFMEDGELTDSEALNCDKRSRFTYQKSEGMILLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIENQDKSLKASKSTPDGTMKDRRLFMHQISLEPITCGPFRTTKERQEMQHPHVTVPGQEFLSKSHFYEHLTLKKSSSSSSVSEQPFSKVPTTTNEKMRHSVTADKATKVFIPPFKTKSHFHRDEQCVSMDNNSEENKQNQKNIGEHGSDDNENKINDSEIHEFNKNNSKLAAAIIFAKYEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKTAVGSQIPSACSHKQLYMYGVSKHCIKINSKNAESFQFHAQDYFGKEDLWARKGIRLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISGVWVYNHYRWIIWKLAAMEFAFPKEFANRCLTPERVLLQLKYRYDIEIDRCRRSAIKKIMERDDTAAKTLVLCVSDITSSNTDTSENSSSKTSCVENKKVAIIELTDGWYPIKAQLDPPLFALLKSGRLTVGQKIIVHGAELVGPPEACSPLEAPDSLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGSVGCADVIIQRTYPIQWMEKTSSGFYIFRNEREEEKEAAKHAEVQQKKLEALFTKIQAEFEEHEESTAKQCTPSRALTRQQIRALQDGAELYEAVKSALDPGCLESYFSEEQLKALNHHRQMLNDKKQAQIQLEFRKAMESAGQGDQGLSRDVTAVWKLRIISYEKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKYERANIQLASTKKTQYQQLLASDEILLQVYQPREPLHFSRLLDPDFQPPYSEVDLMGFVVSVVKKIGGCAPLVYLSDENHNLLAIKFWIDINEDIIKPHMLIAASNLQWRPESKSGIPTLFARDVSVFSASPKEGHFQETFNKMKNSVANIVMFCNEAEKKLMHILNVNIPKCSTPTKEYTSEPYAAQTMLGIGSKFLMSSPVSDIIYPSPSSLCTPKGKSIPTSVSAQMTSKSCCKGEKEADDPKTCKKRRALDFLGRLPLPPHVSPICTFVSPAAQKAFQPPRSCGTKYETPVKKKELSSPQMTPLKKFSETSLLESDSIADEELALINTQALWSGSAGESQLVSESTRTVPTGSKGNPGPKRPSATALNKEREDHQAGTEECETTRKDTRTVKSLS</mol_seq> | |
742 </sequence> | |
743 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">oryctolagus_cuniculus</property> | |
744 </clade> | |
745 <clade branch_length="0.126167"> | |
746 <name>ENSOPRG00000015365</name> | |
747 <taxonomy> | |
748 <id>9978</id> | |
749 <scientific_name>Ochotona princeps</scientific_name> | |
750 </taxonomy> | |
751 <sequence> | |
752 <accession source="Ensembl">ENSOPRP00000014082</accession> | |
753 <name>BRCA2-201</name> | |
754 <location>GeneScaffold_410:590036-664083</location> | |
755 <mol_seq is_aligned="0">MPTGTKERPTLFEIFKMRCNVTDLGPISLNWFEELSSEAPPYNSEPTEESGYKSSNYEPHLFKTPQRKLPYHQLASTPIIFKDRGLSLALYQSALQELSEYRSALGRILPSNEHKSCCKMKAKTERVNAINSPLLNPSESPVIQYTHVTPQRKKSVVCGSLFHTPKLLKGQTQKHISESLAAEVDSDMSWSSSLATPPTLASTVIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSFGEVNSCEDHFEKIPSVLDDEVCEAVTDVLEEDSFFSQHKMGSVQNKSEKTREEIFSEKETDKCDEAEKQTKGDKHSFPREMETKNCDPLDSNVTNQEPSESGNDEITKAFIPSESSQLSLSNLKELKMEKIPLAHVSSWDQSGLEEDPMDTESMQPLTPQDSSPPTSDLPKLETTLNEEPVVHNGDEAQHLGSPDSLLEVKPVISQICSVVSPFEGIKKSIFKITESPEETFDTFFSSDVTNSDFQEKTEISERGMGMHTSYSQKEKSLCQSLAASGSSPAAVTLSSANSKNSSLISTLKKKTKKFIYAVKNESYQGKRIQKDQNVELTNCSAHFEANALDPPLAFANADSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCNNITDLTVQKDQEETTLISEMANPKAEESFLDNENSFVFHVTNERNSLVWESSRELYEAALSPVKDSLLQTSNVVVCEGISDKQVAHASTTKDFDLSLMVHDLAEENKNHVKHHLKVTLGQDLKSDTSSDIYRKSNGNNDMDKWAGLSDPISNHSLGSSFRTASNKEIKLSEHKITKSKMLFKDIEEQYPMSLACVEIMNAMPSDNQKKLTNPDLFDSQPVTAISAYVQSSAFDSDCENNHRAPQVSSLRDDINNLTPSQKAEITELSAILEESGSQFEFTQFRKPSHIMEGNTLEVPGIQMTILNTTTDEREDAHLGCTVNASSSSHIDGNKKFEKAVGIQQNFGCSLKSCTSTNVADNEVEFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQGLREGELDQSEKNAANYIEKPSCENSSNSTVTESDKHHLSGKLDSVYLNNNVSHNSPCHSDNIHNDSGYLSKDKIDSGHEPAVKNVDPTTSGFSNVMSSVREENRCSETMKEDGCDLKCVTKSSPCRNKERATNLAVPHGRDFKVGPPAFSTASGKTVCVSHEAILKVKERFASDCSKMIKPNTGSKSDSSQTKIMAGYFKSSGNPKDDVIFPNPVSNNGKSVYSHKGFADLQNEQMLQYNQRLSALGQVSELSPCRVSMKTLDVCNFNEGMVPKPVFSANSGIFSTANGKPVHVSDAALQKAKQMFSETEGSAEQLFSKVSFKGKERSDQFTGDESAVTDGPENTLFQKDVPYNVINVSAFSGFSTASGKHVSVSESALQEVKGMLEEFDSIRAEHSLQDSPTYRQSVLKVTPPPCVTKRTPEHSVNSKRGSVCSKENESPSDCNNERCSSDYHCREVSPCISHFKKDKQLLLKNKIPLAENTCLLGKKQALPKRTNMETGKTETFSSDPVRTKKEICSAYSGNYSEMEAIEIAEAFMEDGELTDSEVSDFGKHSYQKNKGMAFFNSRMGKRRGDAFVSVGEPPMKRNLLNEFDRIVENEDKSLKPSKSTPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEKSSSSSISEQTFSEVPTTANEKMRHSVATDNPSKVFIPPFKVKSHFQKDEQCVGMDIHLEENKQNHKNISEHGPDDSETQIGAGETHEFNKSGSDQATTVIFTKCEEEPLDLIASFQHGRDMQDMRIRKKKRQRIFPQPGSLYLTKTSTLPKISLKTAVGGQIPSAYSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISREWVYHYRWIIWKAAMEFAFGFANRCLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISANSTRPASWHTKLGFFRDPRPFPPPLSSLFSDGGSVACVDVVIQRTYPVQWMEKTSSGLYVFRNEREEEKEAAKYAEVQQKKMEALLTKIQAEFEEHEESTTKQCVAARALTRQEVRALQDGAELYEAVESAADPRDLESYFSEEQIRALSRHRQILNDKKQAQIQLEFRKAMESAGQGECGLSRDVTAVWKLRIITYDKKEKNSVLLSIWRPSSDLYSLLTEGKRYKIYHLTASKSKSRYEKANVQLAATKKTQYQQLSASDEILLHVYQPRELLHFSRLLDPDFQPACSEVDLIGLVVSVVKKTGRAPLVYLSDEYHNLLAIKFWIDINEDVIKPCVLIAASNLQWQPESKPGIPTLFAREMSVFSASPKEAHFQETFNKMKNTIENIDIFCTEAEEKLVHILNVNDPKCSTPAKEPYAAQTVLSTRSKPL</mol_seq> | |
756 </sequence> | |
757 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ochotona_princeps</property> | |
758 </clade> | |
759 </clade> | |
760 <clade branch_length="0.012286"> | |
761 <confidence type="bootstrap">3</confidence> | |
762 <taxonomy> | |
763 <id>9989</id> | |
764 <scientific_name>Rodentia</scientific_name> | |
765 </taxonomy> | |
766 <clade branch_length="0.001026"> | |
767 <confidence type="bootstrap">4</confidence> | |
768 <taxonomy> | |
769 <id>33553</id> | |
770 <scientific_name>Sciurognathi</scientific_name> | |
771 </taxonomy> | |
772 <clade branch_length="0.081466"> | |
773 <name>ENSSTOG00000005517</name> | |
774 <taxonomy> | |
775 <id>43179</id> | |
776 <scientific_name>Ictidomys tridecemlineatus</scientific_name> | |
777 </taxonomy> | |
778 <sequence> | |
779 <accession source="Ensembl">ENSSTOP00000004979</accession> | |
780 <name>BRCA2-201</name> | |
781 <location>JH393282.1:26945680-27015735</location> | |
782 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCSGADLGPISLNWFEELSSEASLYNSEPAEESEYKTHSYEPNLFKTPQRKLSYHQLASTPIIFKDQGQIQSPLQELGKYRSDLGKNITNSERKSRHTMKAKVGQENDVTSPPLNSCLSESPLALQCTRVTPQREKPVVCGSLFHTPKLVKGQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVKDEEAPETVFPNDTTTILKSYFFNHDESVMKNYRFSPSVSDNENKNERETSHHGLGKMLGNSFGKENSYKKHVGKSMPTALEDEVHEIVADISEEDSFSLHSSKYKTGILQRIRMGKTRKKIFSETRTDEFNEEAEKQMKENKHLFASVIEPSGSGPLDSNITNQKPIGNESDKISNEVVPSSGCEQSKLTFSGLNGTQMERIHLLHISYDQNNTEKDLKDTRKECSSCIISENPLPHTSSLPNSKKILNEKTLVDRRVEGQHLKSHEDSFLAATHAPSEISPVVSPFQGIKKSIFQTFCPSSVDNGSWPATISHTSKHTGLISTLKKKTKKFIYTINDETFHQGKEIQKDQKLELTYSAAQLEASAFEAPLTFTNPDSGLLHSSVKRNYLQNDAEEPTLSLINSSGTILRKCSNNQDSHVNTIVSQDLQEGEVHKEKPKSFIAPETDFLSCLQERQCEDNAESQKVSEKKEKVLVAACHPVVQHLEVESGGIHFPSQKVLLDDDNTNTLLLTPSSRDPGMISRGKESYKMSEKLKCKNCEGSIESSKNSPMEKCQEMCFLNENSKKPELLSKKYVTEVSPSMNMQFNQNINITVIQKGQEKTPLISEITVNPNSKELFPDIENNCVFQITSERNNRVLGNTKELHEADLSCVRKTFPKNSTMVVDTDMAEKQVAHVSVSDSIDSSGIVHDLTEENRNRVKQQLKIISGQDLKANTSLSLKSNRSKGFMDKWAGPLDPVSYHNVGGSFRTASNKEIKLSDHDIKKSKMLFKDIEEQYPASLGCIEIVNTLSFDNQKKLNKPCVSDSQSVNTVSAYVKSSTFLSDFENNHTTPQVLPLRGDFNSNHTLTPSQKAEIKELSTILEESGSQFEFTQFRKTSQIIQNNTFEVPRNQTGLKTSSEEWKDDVHQTIDTSSVAQVESSKKFEGAVGVKQKFAHLLKNNCNKSASNYLTDENKDFRGFYSARGTKLSISSEALQKAVKLFSDIENISEETKAEVDPGSFSSSKCPDSIVSIFKMESHSDDNNLNKKNNECQLTLQNKFEMATHILDEENTENYMKNTENEDNKCTNDNRNTCKLEESDQGDSSKNDTVSGHKDENDLPCTDQHNIDLKLPSQFVKEGSTQFKESLSDLTCLEVVKAEETCHVNFFNKEQLTADKMEQNIKDCGIFDISFQTASGKNINVSKESLNKVVNFFDQKTEELSNFSDSLNSKLLSGINKKKMDISRHGTIDMVKNKILKEGIPVDIDSQLLTLQQQPEYEIEKNKESNLLSFHTASGKKVQIAKESLDKVKNIFDEKKQDVSKITSFTQQGTKTLKDRKDCKGFELACEMITVPKCEEMQDSLINNEKKIVYNEPGVLPRLSDDLYGQTKHLDTLNISLKVKMHEHIEKETTNSPTACRTNQFSYSATGDSALAFYTGHGKKISVNQASLLEAKQWLRKEELDGQGERNTAKAESIKEYGGNPLYENSSDSIMTEKDKIHFSEKQDSAYLSNNSMSNSYSAFCHSSDVCDDSGYLSKNKSNSDIELVMKDKKNTSFRKADIYPQIVNEDTSVQKFVTNFSPCKSKDRTTNMAIPDFKSFEIGPPAFSTASGKIVCISRDAVRKVKKIFTEDHSNVIKENTENKSDICQGKIVKAYSEALDNLEDVIFPNSIGDEECMPSHKVFTDIQSEQIVQHNQKLSGLGKVSEISPCVNLETSDMCEFNRGELPKSFSSTNACGIFSTASGKSVQVSDTSLQKARQIFSEIEDNANQLFSKVSLKSNEEHSNPFTREKSTMAHAPPNVLSPGKSFLCNINSSFSGFSTASGKKVAVSESALHKVKGMLEEFDLMGTEQTLQYSPTSRQDISRMLPPPRIEKRIVEHSVSSKMEKAYNNEFNDNVENASSGNNHCVKVSPYVSQLKQGRQHLVLGTKLSLVENTHLLGKEQTLSKNIIEIGQTETFSSVSVKTNVEVCSTYSKDPENCFETEAVEIAKAFMEDGELTDSEPPTHAKHSFFMCQKNEEMILLNSRTGKRRGNALVSVGEPPIKRSLLNEFDRIIENEEKSLKTLKSTPDGTINDRRLFTHHISLEPIICGPVRTIKKQQETQKPNFTVPGQKFLSKSHLYEHLTSEKSSSNLPVSEQPLYKDPATRKEKMRYSITTGKSNKVFVPPFKTKSHLYRDEHCVSKNINLCENKQKQRNINECGSCNKENNINDSDIHQFDKNSTSQVTTTIVPNCEEESLDLIISLQNARDKQDMRIKKKQGQHIFPQPGSLYLAKTSTLPRISMKAAVGGQAPSACSHKQLYMYGVSKHCIKINSKNAGSFQFHTQDYFSKEDLWSGKGVQLADGGWLIPSNDGKTGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDRSRRSAIKKILERDDTAAKTLVLCVSDIISSITDISETSSSKTSGVDAKKVAIIELTDGWYAVKALLDPPLLALLKNGRLAVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVVVQRVYPMQWMEKTSSGLYIFRSEREEEKEAARHADAHQKKLETLFAKVQAEFEEHEEHTTKQCVPSRALTRQQVHALQDGAELYEAVKNAPDPDYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQEEQGLSRDVTAVWKLRIVSYRKKEKDSAMLSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERAHIQLSATKKTRYQQLPASDEVLLQVYHPREPLHFNRLLDPDFQPPYSEVDLIGFVVSVVKKIGLAPLVYLTDECHNLLAIKFWIDLNEDIIKPHVLIAASNLQWRPESKSGIPTLFAGDFSTFSGSPREGHFQQRLNKMKNTIENIDIFCNDVEKKLMHLLNANDPKCSTPNKEYTSEPHTTQTVLSTGNKFLMTSPNSEINYQSPLSLCTPKGKSVSTPVSTRMTSKSCSKGEKEIDDPKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGSKYETPIKKKELNSPQMTPLKKFNEISLLESDSIPDEELALINTQAILSGSARKSQLSLSDSMRTAPSGSRDSLRQKRHMTSLVRDEENSQNSTEECETSIQDTSAINLPKYL</mol_seq> | |
783 </sequence> | |
784 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ictidomys_tridecemlineatus</property> | |
785 </clade> | |
786 <clade branch_length="0.013586"> | |
787 <confidence type="bootstrap">44</confidence> | |
788 <taxonomy> | |
789 <id>33553</id> | |
790 <scientific_name>Sciurognathi</scientific_name> | |
791 </taxonomy> | |
792 <clade branch_length="0.117166"> | |
793 <name>ENSDORG00000007049</name> | |
794 <taxonomy> | |
795 <id>10020</id> | |
796 <scientific_name>Dipodomys ordii</scientific_name> | |
797 </taxonomy> | |
798 <sequence> | |
799 <accession source="Ensembl">ENSDORP00000006609</accession> | |
800 <name>Brca2-201</name> | |
801 <location>GeneScaffold_1038:358641-411759</location> | |
802 <mol_seq is_aligned="0">MPIESPGRPTFFEIFKTQCSKADLGPISLNWFEELSSEAPPYNSEYADESEYKINSYEPNSFKTPQRKPFYQLASTPIAFKEQGQTLRVQPSPLKELGKYLDLGKDIANNEHKNCHTKVEHIIDVTSPSLNSCLTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKPKHISESLGVEVDPDMSWSSSLATPPTLSSTVLIVRDEETSGTIFPNDPTVILKNYFSKHKESLKKNYHFIPSVTNSENKNQREASSHGFGKVLENSFGKVNSDKDDFRTSMTDTQEDEVHETVADFSEEDSFSLCFSKKRTGNLHKTRLDKTRKKIFCETSTDEFSEKDKQVKEDKYSFASEVEPSDDDPLDTNLGNQNPFGHESNKASKEAVPSSDWEWSQLNLSGLNETQMEKMPLLPISSYDQGNSENNLIDTEKECMTSINTKNSLLPISSLPQSEEILQEETLIDKRDEEQQLESHEDSFLVAKQIVPGTSPTVSPFPSIKKSLFRIRQPSEETSDEVFSGNLTKTNFKEESGTFESGMEIRAICSQKADSLFPSSLDSEKHPATSTHTSVTLKIEGLISSLKKKKKKFIYAIDDETSCQVKKSQKLQKSEPTNHSSQCEAPLIFTDAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSPVLGTTEELYEADHSCVKEPIFKNCMMVIDTDIDDKQAAHVLITEGLIYDLTEENKNSAKQNLKRTLSQELKSNSFLDIKDIKSNRNNYYEDKLSGLLNPLTDHSFRGGFRTASNKEIKLSEHNIKKSKVLFKDIEEKYPTSLPCVEIANTNTLTLDHQKKLNKLNISNSKLVNTVSPSVQSGTFIPDCENNHTSPLKQDISANHNLTPSQRAEVTELSTILEESGSQFEFTQFRKLCHRAQNLTSEVPKNQMADSNHTSDLHLGQVDRSEKLKEVARIKQTSACLLKNYNKSTGESEKEFQGFYSALGTKLSISTEALQKALKLFSDIDIIHEETSVEAEPRFSSSNSHDSFVSAHKIESHTNNKNLHEKNSKCQLILQNNIEMTPGIICEENTENYMRNTGSKCNRCTDMSRSICKLQESDGTDSSRNDDKVYIHKDESNLQCTDRHNIYIKSASQFTKEGNIQTKECLSDLTCLEVMKAEETCLTNSSNKEQLTVGKKEQNVKDFDITSPTASGKNNRVPEESSNFFDKHMGEISNFSNSFNSELLSGIIKSKVDISCHGETDMTENKISEEGIPVGNRKQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKERQEMQNPNVTAPDKGFLSKPHLDKHLEKSSSNLPDSGQLVHKIPNTRNETMRQSVTIGKLAKVFVPPFKVKSHLHKDEHHVSKQTNFEEEKQKQRKIEECGSSDCENINSEIHQFSKDSSCQEATMIFTKCKEPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRAWAYNHYRWLIWKLAAMEFSFPKEFANRCLNPERVLLQLKYRYDMEIDRSKRSAIKKIMERDDTPAKTLVLCVSDIISSTSETCSNKTDGADTKNVAMLELTDGWYAVKAQLDPPLLALLKNGRLAVGQKIITHGAELIGSPDACAPLEAPDSLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCADVIVQRVYPIQWMEKTPSGLYIFRNEKEEEREAAKFAEAQQKKLEALFTKIQTEFEKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSEEQLRALNNHKQMLNDKKQAQIQLEFQKAMESAEKVEERLSRDVTPVWKLCIVSYGKKGRDAVTLSIWRPSSAVLSLLTEGNRYRIYHLATSKSKCKSERANIQLTATKRTQYQQLPASDEILFQVYQPREPLQFSRLLDPDFQSPCSEVDLIGFVVSVVKKIGLAPLVYLSDEYHNLLAIKFWIDLNEDVIKPHTLIAASNLQWRPESKSGIPTLFAGDHSMFSASPRENHFQERFHKMKNTVENIDVLCNDAKKKLMSLLNANYPKWSNPTKDYKSEPCPAYSALGVDNEVLSSPSSKQNYQSHLSLCTPKEKCLPNPVSAQMISESSHKEEKEIDDPTCKKRKALEFLTRLPLPPPVSPICTFVPAAQKAFQPPRSCGTKHRTTKRKELNFPPVTPFKKVNEISLLERDSIADEELALLNTQSLVSDSMGESHLLIRESKRTTPSSTQDHLGQKKQQESLMGGQGNPQAGTKECEK</mol_seq> | |
803 </sequence> | |
804 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">dipodomys_ordii</property> | |
805 </clade> | |
806 <clade branch_length="0.156559"> | |
807 <confidence type="bootstrap">100</confidence> | |
808 <taxonomy> | |
809 <id>39107</id> | |
810 <scientific_name>Murinae</scientific_name> | |
811 </taxonomy> | |
812 <clade branch_length="0.044347"> | |
813 <name>ENSRNOG00000001111</name> | |
814 <taxonomy> | |
815 <id>10116</id> | |
816 <scientific_name>Rattus norvegicus</scientific_name> | |
817 </taxonomy> | |
818 <sequence> | |
819 <accession source="Ensembl">ENSRNOP00000001475</accession> | |
820 <name>Brca2-001</name> | |
821 <location>12:504007-544748</location> | |
822 <mol_seq is_aligned="0">MTVEYKRRPTFWEIFKARCSTADLGPISLNWFEELSSEAPPYNTEPPEESEYKPQGHEPQLFKTPQRNPSYHQFASTPIMFKEQSQTLPLDQSPFKELGNVVANSKRKHHSKKKARKDPVVDVASLPLKACPSESPCTPRCTQVAPQRRKPVVSGSLFYTPKLEETPKHISESLGVEVDPDMSWTSSLATPPTLSSTVLIARDEEAHRNAFPADSPASLKSYFSNHNESLKKNDRFIPSVSDSENKSQQEAFSQGLEKMLGDSSSKINRFRDCLRKPIPNVLEDGETAVDTSGEDSFSLCFPKRRTRNLQKTRMGKMKKKIFSETRTDGLSEEARGQADDKNSFALEIEPRDSEPLDPSVTNQKPLYSQSGDISSEAGQCSDSIWSQPDPSGLNGTQTRKIPLLHISSHKQSILEDFIDMKKEGTGSITFPHISSLPEPEKMFSEETLVDKEHEGQHLESLEDSISGKQMVSGTSQTACLSPSIRKSIVKMREPLEETLDTVFSDSMTSSAFTEELDASAGGLEIHTACSQREDSLCPSSVDTGSWPTTLTDTSATVKNAGLITTLKNKRRKFIYSVSDDASHQGKKLQTQRQSELTNLSAPFEASAFEVPFPFTNVDSGIPDSSIKRSNLPNDPEEPSLSLTNSFVTAASKEISYIHALISQDLNDKEAILSEEKPQPYTALEADFLSCLPERSCENDQKSPKVSDRKEKVLVSACRPSGRLAAAVQLSSISFDSQENPLGSHNVTSTLKLTPSPKTPLSKPVVVSRGKMCKMPEKLQCKSCKDNIELSKNIPLGVNEMCVLSENSETPELLPPLEYITEVSSSVKSQFNQNTKIAVVQKDQKDSTFISEVTVHMNSEELFPEKENNFAFQVTNESNKPNIGSTVEFQEEDLSHTKGHSLKNSPMTVDRDLDDEQAGQVLITEDSDSLAVVHDCTKKSRNTIEQHQKGTADKDFKSNSSLYLKSDGNNDYLDKWSEFLDPLMNHKFGGSFRTASNKEIKLSEDNVKKSKMFFKDIEEQYPTSLDCIDTVSTLQLANKKRLSEPHTFDLKSGTTVSTQCHSQSSVSHEDTHTAPQMLSSKQDFHSSHNLTPSQKAEITELSTILEESGSQFEFTQFKNPSHIAQNNTSAVLGNQMAVVRTASEEWKDVDLHLPLNPSSVGQIDHNKKFECLVGVKQSSSHLLEDTCNQNTSCFLPIKEMEFGGFCSALGTKLSVSNEALRKAMKLFSDIENISEEPSTKVGPRGFSSCAHHDSVASVFKIKKQNTDKSFDEKSSKCQVTVQNNKEMTTCILVDENPENYVKNIKQDNNYTGSQRNAYKLENSDVSKSSTSGTVYINKGDSDLPFAAEKGNKYPESCTQYVREENAQIKESVSDLTCLEVMKAEETCHMKSSDKEQLPSDKMEQNMKEFNISFQTASGKNIRVSKESLNKSVNILDQETEDLTVTSDSLNSKILCGINKDKMHISCHKKSINIKKVFEEHFPIGTVSQLPALQQYPEYEIESIKEPTLLSFHTASGKKVKIMQESLDKVKNLFDETQYVRKTTNFGHQESKPLKDREDYKERLTLAYEKIEVTASKCEEMQNFVSKQTEMLPQQNDHMYRQTENLTSNGSSPKVHGNIENKIEKNPRICCICQSSYFVTEDSALACYTGDSRKTCVGESSLSKGKKWLREQSDKLGTRNTIEIQCVKEHTEDFAGNALYEHSLVIIRTEIDTSHVSENQASTLFSDPNVCHSYLSHSSFCHHDDMHNDSGYFLKDKIDSDVQPDMKNTEGNAIFPKISATKEIKLHPQTVNEECVQKLETNASPYANKNIAIDSAMLDLRNCKVGSPVFITTHSQETVRMKEIFTDNCSKIVEQNRESKPDTCQTSCHKALDNSEDFICPSSSGDVCINSPMAIFYPQSEQILQHNQSVSGLKKAATPPVSLETWDTCKSIRGSPQEVHPSRTYGIFSTASGKAVQVSDASLEKARQVFSEIDGDAKQLASMVSLEGNEKSHHSVKRESSVVHNTHGVLSLRKTLPGNVSSSVFSGFSTAGGKLVTVSESALHKVKGMLEEFDLIRTEHTLQHSPTPEDVSKIPPQPCLESRTPEYSVSSKLQKTYNDKSRSPSNYKESGSSGNTQSLEVSPQLSQMERKQETQSVLGTKVSQRKTNILEKKQNLPQNIKIESNKMETFSDVSMKTNVGEYYSKEPENYFETEAVEIAKAFMEDDELTDSEQTHAKCSLFACPQNEALLNSRTRKRGGMAGVAVGQPPIKRSLLNEFDRIIESKGKSLTPSKSTPDGTIKDRRLFTHHMSLEPVTCGPFCSSKERQETQSPHVTSPAQGLQSKGHPSRHSAVGKSSSNPTVSALRSERTRHSVSDKSTKVFVPPFKVKSRFHRDEHFDSKNVNLEGKNQKSADGVSEDGNDSDFPQFNKDLMSSLQNARDLQDIRIKNKERHHLCPQPGSLYLTKSSTLPRISLQAAVGDSVPSACSPKQLYMYGVSKACISVNSKNAEYFQFAIEDHFGKEALCAGKGFRLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISSVWVSNHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSSRSALKKILERDDTAAKTLVLCVSDIISLSTNVSETSGSKASSEDSNKVDTIELTDGWYAVKAQLDPPLLALVKSGRLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSKLGFFHDPRPFPLPLSSLFSDGGNVGCVDVIVQRVYPLQWVEKTVSGSYIFRNEREEEKEALRFAEAQQKKLEALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAELYAAVQDASDPEHLETCFSEEQLRALNNYRQMLSDKKQARIQSEFRKALEAAEKEEGLSRDVSTVWKLRVTSYKKREKSALLSIWRPSSDLPSLLTEGQRYRIYHLSVSKSKNKFEWPSIQLTATKRTQYQQLPVSSETLLQLYQPRELLPFSKLSDPAFQPPCSEVDVVGVVVSVVKPIGLAPLVYLSDECLHLLVVKFGIDLNEDIKPRVLIAASNLQWRPESTSRVPTLFAGNFSVFSASPKEAHFQERVTNMKHAIENIDTFYKEAEKKLIQVLKGDSPKWSTPNKDPTREPYPASTCSASDLASGGQLPRSSPTDQQSYRSPLSCCTPTGKSTPLAHSAWMAAKSCSGENEIEDPKTCRKKRALDLLSRLPLPPPLSPVCTFVSPAAQKAFQPPRSCGTKYPTPLKKEGPSSPWSRAPFQKASGVSLLDCDSVADEELALLSTQALVPHSVGGSEQVFPSDSTRTEGPSASTEARPANRSKRESLRDCRDDSDGKLAAETVPDYS</mol_seq> | |
823 </sequence> | |
824 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">rattus_norvegicus</property> | |
825 </clade> | |
826 <clade branch_length="0.034382"> | |
827 <name>ENSMUSG00000041147</name> | |
828 <taxonomy> | |
829 <id>10090</id> | |
830 <scientific_name>Mus musculus</scientific_name> | |
831 </taxonomy> | |
832 <sequence> | |
833 <accession source="Ensembl">ENSMUSP00000038576</accession> | |
834 <name>Brca2-201</name> | |
835 <location>5:150522630-150570329</location> | |
836 <mol_seq is_aligned="0">MPVEYKRRPTFWEIFKARCSTADLGPISLNWFEELSSEAPPYNSEPPEESEYKPHGYEPQLFKTPQRNPPYHQFASTPIMFKERSQTLPLDQSPFRELGKVVASSKHKTHSKKKTKVDPVVDVASPPLKSCLSESPLTLRCTQAVLQREKPVVSGSLFYTPKLKEGQTPKPISESLGVEVDPDMSWTSSLATPPTLSSTVLIARDEEARSSVTPADSPATLKSCFSNHNESPQKNDRSVPSVIDSENKNQQEAFSQGLGKMLGDSSGKRNSFKDCLRKPIPNILEDGETAVDTSEEDSFSLCFPKRRTRNLQKMRMGKTRKKIFSETRTDELSEEARRQTDDKNSFVFEMELRESDPLDPGVTSQKPFYSQNEEICNEAVQCSDSRWSQSNLSGLNETQTGKITLPHISSHSQNISEDFIDMKKEGTGSITSEKSLPHISSLPEPEKMFSEETVVDKEHEGQHFESLEDSIAGKQMVSRTSQAACLSPSIRKSIFKMREPLDETLGTVFSDSMTNSTFTEEHEASACGLGILTACSQREDSICPSSVDTGSWPTTLTDTSATVKNAGLISTLKNKKRKFIYSVSDDASLQGKKLQTHRQLELTNLSAQLEASAFEVPLTFTNVNSGIPDSSDKKRCLPNDPEEPSLTNSFGTATSKEISYIHALISQDLNDKEAIVIEEKPQPYTAREADFLLCLPERTCENDQKSPKVSNGKEKVLVSACLPSAVQLSSISFESQENPLGDHNGTSTLKLTPSSKLPLSKADMVSREKMCKMPEKLQCESCKVNIELSKNILEVNEICILSENSKTPGLLPPGENIIEVASSMKSQFNQNAKIVIQKDQKGSPFISEVAVNMNSEELFPDSGNNFAFQVTNKCNKPDLGSSVELQEEDLSHTQGPSLKNSPMAVDEDVDDAHAAQVLITKDSDSLAVVHDYTEKSRNNIEQHQKGTEDKDFKSNSSLNMKSDGNSDCSDKWSEFLDPVLNHNFGGSFRTASNKEIKLSEHNVKKSKMFFKDIEEQYPTRLACIDIVNTLPLANQKKLSEPHIFDLKSVTTVSTQSHNQSSVSHEDTDTAPQMLSSKQDFHSNNLTTSQKAEITELSTILEESGSQFEFTQFRKPSHIAQNTSEVPGNQMVVLSTASKEWKDTDLHLPVDPSVGQTDHSKQFEGSAGVKQSFPHLLEDTCNKNTSCFLPNINEMEFGGFCSALGTKLSVSNEALRKAMKLFSDIENSEEPSAKVGPRGFSSSAHHDSVASVFKIKKQNTEKSFDEKSSKCQVTLQNNIEMTTCIFVGRNPEKYIKNTKHEDSYTSSQRNNLENSDGSMSSTSGPVYIHKGDSDLPADQGSKCPESCTQYAREENTQIKENISDLTCLEIMKAEETCMKSSDKKQLPSDKMEQNIKEFNISFQTASGKNTRVSKESLNKSVNIFNRETDELTVISDSLNSKILHGINKDKMHTSCHKKAISIKKVFEDHFPIVTVSQLPAQQHPEYEIESTKEPTLLSFHTASGKKVKIMQESLDKVKNLFDETQYVRKTASFSQGSKPLKDSKKELTLAYEKIEVTASKCEEMQNFVSKETEMLPQQNYHMYRQTENLKTSNGTSSKVQENIENNVEKNPRICCICQSSYPVTEDSALAYYTEDSRKTCVRESSLSKGRKWLREQGDKLGTRNTIKIECVKEHTEDFAGNASYEHSLVIIRTEIDTNHVSENQVSTLLSDPNVCHSYLSQSSFCHCDDMHNDSGYFLKNKIDSDVPPDMKNAEGNTISPRVSATKERNLHPQTINEYCVQKLETNTSPHANKDVAIDPSLLDSRNCKVGSLVFITAHSQETERTKEIVTDNCYKIVEQNRQSKPDTCQTSCHKVLDDSKDFICPSSSGDVCINSRKDSFCPHNEQILQHNQSMSGLKKAATPPVGLETWDTSKSIREPPQAAHPSRTYGIFSTASGKAIQVSDASLEKARQVFSEMDGDAKQLSSMVSLEGNEKPHHSVKRENSVVHSTQGVLSLPKPLPGNVNSSVFSGFSTAGGKLVTVSESALHKVKGMLEEFDLIRTEHTLQHSPIPEDVSKILPQPCAEIRTPEYPVNSKLQKTYNDKSSLPSNYKESGSSGNTQSIEVSLQLSQMERNQDTQLVLGTKVSHSKANLLGKEQTLPQNIKVKTDEMKTFSDVPVKTNVGEYYSKESENYFETEAVESAKAFMEDDELTDSEQTHAKCSLFTCPQNETLFNSRTRKRGGVTVDAVGQPPIKRSLLNEFDRIIESKGKSLTPSKSTPDGTVKDRSLFTHHMSLEPVTCGPFCSSKERQGAQRPHLTSPAQELLSKGHPWRHSALEKSPSSPIVSILPAHDVSATRTERTRHSGKSTKVFVPPFKMKSQFHGDEHFNSKNVNLEGKNQKSTDGDREDGNDSHVRQFNKDLMSSLQSARDLQDMRIKNKERRHLRLQPGSLYLTKSSTLPRISLQAAVGDRAPSACSPKQLYIYGVSKECINVNSKNAEYFQFDIQDHFGKEDLCAGKGFQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISSIWVANHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSRRSALKKILERDDTAAKTLVLCISDIISPSTKVSETSGGKTSGEDANKVDTIELTDGWYAVRAQLDPPLMALVKSGKLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSRLGFFRDPRPFPLPLSSLFSDGGNVGCVDIIVQRVYPLQWVEKTVSGLYIFRSEREEEKEALRFAEAQQKKLEALFTKVHTEFKDHEEDTTQRCVLSRTLTRQQVHALQDGAELYAAVQYASDPDHLEACFSEEQLRALNNYRQMLNDKKQARIQSEFRKALESAEKEEGLSRDVTTVWKLRVTSYKKKEKSALLSIWRPSSDLSSLLTEGKRYRIYHLAVSKSKSKFERPSIQLTATKRTQYQQLPVSSETLLQVYQPRESLHFSRLSDPAFQPPCSEVDVVGVVVSVVKPIGLAPLVYLSDECLNLLVVKFGIDLNEDIKPRVLIAASNLQCQPESTSGVPTLFAGHFSIFSASPKEAYFQEKVNNLKHAIENIDTFYKEAEKKLIHVLEGDSPKWSTPNKDPTREPHAASTCCASDLLGSGGQFLRISPTGQQSYQSPLSHCTLKGKSMPLAHSAQMAAKSWSGENEIDDPKTCRKRRALDFLSRLPLPSPVSPICTFVSPAAQKAFQPPRSCGTKYATPIKKEPSSPRRRTPFQKTSGVSLPDCDSVADEELALLSTQALTPDSVGGNEQAFPGDSTRNPQPAQRPDQQVGPRSRKESLRDCRGDSSEKLAVES</mol_seq> | |
837 </sequence> | |
838 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">mus_musculus</property> | |
839 </clade> | |
840 </clade> | |
841 </clade> | |
842 </clade> | |
843 <clade branch_length="0.137701"> | |
844 <name>ENSCPOG00000005153</name> | |
845 <taxonomy> | |
846 <id>10141</id> | |
847 <scientific_name>Cavia porcellus</scientific_name> | |
848 </taxonomy> | |
849 <sequence> | |
850 <accession source="Ensembl">ENSCPOP00000004635</accession> | |
851 <name>BRCA2-201</name> | |
852 <location>scaffold_6:33778275-33853154</location> | |
853 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKRRCDKADLGPISLNWFEELSSEAPPFNSEPAEESEYKVNTYEPNPFKTPQRKPCYQLASTPIIFKEQGQTLPLYQSPLNELGTDIADTELKNCHTVKANVDRISDVTSPPLNSCFSESPLVLRCTQKTPQRKMPVICGSLFHTPRLVKGQTPKHIPESLGAEVDPDMSWSSSLATPPTLGSTVLLVRDEVSETIFPNDTTVILKHSLSSHDENLKKNDSFIPPVMENENKNQREASHSGLGEVVGNSFGKTCSSKDHFGKLMPNPLENEVHETVTDIFDEDSFSLCFPKYRTGNLQKTSKTRKKIFHEARTDDFKEQMKENKHSLTSEMEPNDGDPLDSDVASQKPLGPESDRISKEAAPSSSCEWSQLTFPGPNATQRKEMPVLPVSSYDQDNSGKDSIESEKESSNHNTSENSLPHTSSLSEKISNGEKPVDERDGRQHPESHEDSIRAVKGTVSWTSPVSPLFQGAKRPIFKIGEPSEDTFNTVLSDIVMKPNFKETETSKSGLEMYTDCSQKEDSLCLSSVDNRSLPAAIPHSSVTLKNTGLISSLKKKTKKFIYAINDKACYQRENLQENQKTELTSHSAQFEADTFKASLTFTNADAGLSHSSVKRNCFQNDPKESTFLTNSSGTSPRKHSNNESSYANKIISQDLNYNETKLNKEKSQSLTSPETDFLSCLQKRRWDDDPKSQKVSDIKENVLVVTCQPEARHSEAEHSGILFQSQKSFFDGHDNTSPLTLTPSSKDPLLNPVMISKGKKSYKISEKLKRENCETGIELAQNISIENNQEICVLNLNSKKTELLPPEKYVSAASPSVTMPFSHNTNLTATQEDQEETSLISEMPGNPNSEELFAGNKNNFVFQITDESSPVLGKTKEVHGSDCSFMKESILQNSAMVVDTDIDDKQVVQMPITEDFGPSNTIHDLKENRTDVKQHLASGQDLKSDLSLDRKPNRNDYTHKMTVILGPVSSHSFGGGFRTASNKEIKVSQHYIKKGKMLFKDIEEQYPTSSAPVEIVNALLNNEKKLNKPHAFDLQSVNTVSTYVQRSASISDHENHTASQRLSVKQDFNSNLNLTPSQKAEITELSSILEESGSQFEFTQLRKPNHLIKSNTLQVPGNQMTALSTTSKESKDVNLQAIIDASSICQVGSSKKFGGAAGEKQKSACLLKNNPNKSAAGFLTNENEVAYRGFYSGLGTKKLSVSSEAPQKPLKLFSDIENISEETSDKVDPSFSASKCYDSVASVFKIENHNNNKNVNVKNSCQAVLQSNAEMTTGNFAEENTENCMRNSENEDNKYIGTSTNNCKLGKPGGTDSSKNDTGYIQKDNDLPCKDQHNMHLKLSSQFMSEVSTELKETLSDLTCLEVVKAEETCYINSNEQLTTDEMEQYTNNFGISFQTASGKNISVTKESLNKAVNLFDQETEEWNDFSDSLNCKLLPGIKNKMDISSHEETNVMKNKILEKSTPAGTAAQLCVLQQPECKIENEPNLLGFYTASGKKVNIAKESLNKVKNLFDENRQDVSKITKWGHQVAKILSDRQDCEERLELARETVAITDIPQCEEMPSVSGGLHRQTKNLKASNSISLKVKVPENVEKGIANPPTTSCTDQFSYSAIKDLPVAFYTGHGKKIPVNPALLFKATKWLKDLNDEHEEDCVGNPSRYLSKNQVDSGTELVMNVKDKNNTDFSEVVPTIKVSTHPQAINEDVCVQQPVTISSPFKSKNPAVNVAVSDSGNYEVGPPAFSTASSKMVFVSQDSTEKQVFIENCNKTINQNTESKSDTCQRETVTGSKALDNSEDAIFPDSPDDEECVRSCKSFADTQSEESLQHNKSMSGLETIFERPSYVSLKAPDKCKFSDTEKLPKTMSSNIYGIFSTASGKSVQVSNGSLQKAKQMFSKTEDSAKQLFSKVFKSSEHSDQFTKEEITVMRTPSKHSARSTAFSGFSTASGKQVSVSESALHKVKGMLEEFDLIQTAYTLGHSTSSRQDVSKIPLCIDESTPQHSIDFKMQKNCNNEYKVSSNYNTESSSSEGNHSVTLSPCLSQFKQDKQHLVLGTRGSLFENAHILREEQAFPQNSMEISKTETFSNDSVRTSAEVCSPNPEEPETYFETEAVEIAKAFMEDDELTDSEPPGHPGHSLSTCQKKEGVLLNSRAGKRRGGALVSVGESQIKRSLLNEFDRIKENEEKSLKASKCTPDGTVKDRKRFTHHISLEPVTCGPSCTTSNRQEIQNLNCTAPDQEFLSTSHLYEHLTLEKSSTSLPVSRQPFYKVPAVRSENTRYSTTASKPVKVFVPPFKTKSHFHRDECFVSRDINLEENKQKQQNIDDCGSDDSENNVDGSEIHQFNKNCSNQGTVKIFPKCKEEPLADLMTSLQNARKIQDIRIKEKEKQHIFPQPGSLYLAKTSSLPRISLKAAVGGRVPSACSHKQLYMYGVSIHCMKINSKNAESFKFHIQDYFGKEDLQAGKGIQVADGGWLIPDNDGKAGKEEFYRALCDTPGVDPKLISRVWVCNHYRWIIWKLAAMEVAFPQEFASRCLNPERVLLQLKYRYDVEIDRSRRSAIKKILERDDIAAKTLVLCVSDIVSSNTNTSEGSGDKASADIKKAAVVELTDGWYAVRAQLDPPLTTLLKSGRLAVGQKVVTHGAELVGSPDACAPLEAPESLMLKISANSTRPARWDARLGFLPDPRPFPLCLSSLFSDGGAVGCADVVVQRVYPVQWVEKTSSGLYIFRNEREEEKEAAKHAEAQQKKLEALFSRIQAQFEEREANPAKRCTSSHALTRQQVRALQDGAELYEAVRSAPEPGYLEGCFSEEQLRALNKHRQMLDAKRQAQMQLEFRKAVEHAEQGERGLARDVAALWRLRVVSHERKEDCSVILSIWRPSSDLHSLLTEGKRYRIYHLAASKSKSKSERANIQLTTQYQQLTASDEILLQAYRPRQALCFSRLLEPDFQPPYSEVDLIGFVVSVVKKIGLAPLVYLTDECYNFLAVKFWIDLNEDIIRPHMLVAASNLQWRPESNSGIPTLFAGDFSVFSASPKEGHFQERFNKMKTVVENVDTFCNDAAEKLTHFLGVSDPKRAPPSTDCTSELHTAQTGLGTRNKCLMSSPSDEINYQSALSLCCPKGKSVSTPIAAQITSKSCAEQKAVNDPKNSKKRRALDFLSRVPLPPPVSPICTFVSPAAQKAFQPPRICDTKYETPKLDFPQMTPLKKASAVSLLESNSIADEELAMINTQALLSGSAGENQLPSARESRRTAPSSSGDYLGQKGHCAVPLVTGQENSQASTGECKSNLQDTSRIKNLSKRLQRRQKHK</mol_seq> | |
854 </sequence> | |
855 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">cavia_porcellus</property> | |
856 </clade> | |
857 </clade> | |
858 </clade> | |
859 <clade branch_length="0.00151"> | |
860 <confidence type="bootstrap">47</confidence> | |
861 <taxonomy> | |
862 <id>314146</id> | |
863 <scientific_name>Euarchontoglires</scientific_name> | |
864 </taxonomy> | |
865 <clade branch_length="0.096277"> | |
866 <name>ENSTBEG00000015907</name> | |
867 <taxonomy> | |
868 <id>37347</id> | |
869 <scientific_name>Tupaia belangeri</scientific_name> | |
870 </taxonomy> | |
871 <sequence> | |
872 <accession source="Ensembl">ENSTBEP00000013856</accession> | |
873 <name>BRCA2-201</name> | |
874 <location>GeneScaffold_2732:1286-173851</location> | |
875 <mol_seq is_aligned="0">RDEETSETVFPNDTSAILKSYFSNHDESLKKNDRFIPSVKDNENKSQRETGSHGLEKILDNSFSEVNYSKDHFEESMTKILEDEVHDTVADISEEDSFSLCFSKYRTGNLQKVRTSKTRKKILPETKTHECEEAKKQRNENIYSFTSKMKPTDSAPLDANVTNQKPLGCGSDKISKEVLLSSASEWSQLKISELNRTQIEKISLLHSSSCDQNNSEKDLINIEKECINFSTSENSLPHISSLPKSEKILNEETVANKKDTRQYLESHGDSLLAVGQARSGTVITSPLQGIKKSIFRIRESPEETFSTVFTDDTTNSNFKETEASESGLQKYTVCSQKEDSLCPSSINGSWPVTATHTSVSLKSTGLISTLKKKTKKFIYAIKDEASYQGKIIQKDQQSELTNSPTHYEANAFETSLKIADSGLLPSVKRNCLQDDSEEPTLSVVNSFGTMLMKFSINKTSSNNPIIFQDLDCKKAKNNKEKLQSFIAPEADYLSCLLERQSKDDPKSQEVSDIKEKVLATTCHPTVYHSEVEHSGTHFQFQKSFLYDHDNTNPLTLTPSSEDPLSNTVVISREKESCKMSEKLKYKKCEASFELTKNMPVAKTEEMCALNENSEEAELLPPKKYIPIVPPSVKMQFNQNIILTIGKAQKETILRSEITGSLNSEELFPDNENSVFQVTKGRNNPVLGNTEELHEVDLSYIKEPILQNSAMVTCTDTDDKQPAQILITKDLDSSDTVCGLIGENNVKQNQKMTLGEDLKSDILDVDLKSNRKNDYMDKWSGLLDPVSNHSFGGSFRTASNKEIKLSEHNVTKSKMLFKDIEEQYPTSLACVEIVSTLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNFVEENTENYKRNTENKDSKYTGANRNTCNLGESDSSDSDKNNTVHKDKNDVASADQHNICLKLSNQVIKEGNSQSKESLSDLTCLEVVKAKETCHVNTSNIGQLTASKMEQNIKGFEIFDISFQTASGKNIRVSKESQNKVVNFFDQKPEEELNSCSLNSKLISGINKNKMDISNHEEIDLVKNETLKKGILVDTRNPLLTLQQQPKCETEMIKEPTLLSFLTASGKKVKIAKESLDKVKNLFDEKELDNSEIISFCHERAKTLKDKDVYKEGPEITCETAETTVPKHEGIQNSLDDDEKNLVFNETAVLPRLLSDHLYGQTENCKTANTSSLEVKVHETVEKETVNIPTTCYTKQPPYSTMENSALAFYTGHGRKISVSQMSLNEAKKWLREGELVDQPEKISTADYVGKLSHENSSNNIIAESEKKHLSKRQGLTYLYNSMSNSYSYRSDFCHSDELYNDSGYLSKSNIGSGIEAVMKDVKDKINTSISEVMSTVRETNTYSQTVNEDTCVQKLTDSSLCKNKNATTKLAISDSNNFEVGPPAFSTASGKIVCVSHEMIKKVKEIFSDNCSKILKQNTENDSGSCQACGDSENIFPNAIDDESSMCSHKIFVDIQSEVLQPNESKSGLEKVSEMSSCHVGLKTSDKCKFNIEKLPESVPFTNACGIFSTASGKSIHVSDVSLQKARQVFSEIEDNAKNNEHLDQFTREENTMTHTPECLSPKKGFSYNKINSSAFCGFSTASGKRVAVSESALHKVKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKDQENCFETEAVEIGAFMEDGELMDFSTDHAKRSFFTCQKYEEIDLLNSRIRKRRGTLVTVGEPPIKRNLLNEFDRIIENQEKYLKASKSTPDGTIKDRRLFMHHISLEPVTCGPFCASKEQKEIQKPNFTIPGQTFLSKSHFYEHLTLEGSSSNLSVSGQPLNKVSATRNEKIRHSITTDKPTKVFVPPFKPKSFHREEQCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTSLQNARDIQDTRIKKKQSQCVFPQPGSLYLTKTSTLPRISLKTAVGGRTPFARSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRIWVYNHYRWIVWKLAAMEFSFPKEFANRCLSPERVLVQLKYRYDIEIDGSRRSAIKKIMERDDTAAKTLVLCVCDIISSSTNISEISSSKTSSVDTKKVATIELTDGWYAVKAQLDPPLLALVKNGKLTIGQKIITHGAELVGSSVACTPLEAPESLMLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYAEAQQKKLEDLLTKIQADFEAHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESSEQGIQGLSRDVTAVWKLRVTSYGQKEKDSVILSIWRPSSDLYSLLTEGKRFRIYHLATSKSKSKSERASIQLAATRKTQYQQLSASDEILLQVYQPRELLHFDRLLDPDFQPPCSEVDLIGFVVSVVKKIGLTSLVYVSDECHNLLAIKFWVDLNEDIIKPHLLIAASNLQWRPQLKSGIPTLFAGDFSMFSSSPKENHFKERFNKMKNTVENIDTFCSEAENKLMCILNANDPKWSTPTKGYTSEPIIATGNKFMMSSPNSEINYRSPLSHCTPVEKSVLTPGSAHMTSKSCKGEKEIEDPKDCKKRRALDFLSRLPLPPPISPICTFVSPAAKKAFQPPRSCSTKYETPIKKKEFNSPEMTPVKKYNEICLLESNSIADEELALINTQGLLSGSAGENHLTSPGESSQTAPTSSEDYLRLKRQDTTSLTKGQENSQTSTQKNEAKMEDISTKKYI</mol_seq> | |
876 </sequence> | |
877 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tupaia_belangeri</property> | |
878 </clade> | |
879 <clade branch_length="0.005621"> | |
880 <confidence type="bootstrap">63</confidence> | |
881 <taxonomy> | |
882 <id>9443</id> | |
883 <scientific_name>Primates</scientific_name> | |
884 </taxonomy> | |
885 <clade branch_length="0.018724"> | |
886 <confidence type="bootstrap">100</confidence> | |
887 <taxonomy> | |
888 <id>376911</id> | |
889 <scientific_name>Strepsirrhini</scientific_name> | |
890 </taxonomy> | |
891 <clade branch_length="0.07109"> | |
892 <name>ENSOGAG00000010588</name> | |
893 <taxonomy> | |
894 <id>30611</id> | |
895 <scientific_name>Otolemur garnettii</scientific_name> | |
896 </taxonomy> | |
897 <sequence> | |
898 <accession source="Ensembl">ENSOGAP00000009477</accession> | |
899 <name>BRCA2-201</name> | |
900 <location>GL873639.1:315573-415772</location> | |
901 <mol_seq is_aligned="0">MSVGSKERPTFFEIFKTRCNEADLGPISLNWFEELSSEATPFSSEPVEESEYKIISYESHVFKTPQRKPFYRQLASTPLIFKEQGPTLPLFQSPVKELDKCKLDLGNNIANSKHKSHHTGNAKMDQAGDVTSPLLSSRLSESPVLQYTHVTPQREKSVVCGSLFHTPKFVKGQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRSEDASEIVFPNDTTAILKSYFSNRDESLKENDRLISSVTDHENKNEREARSCGLGKILGNSFDEVNSCKEYFGKSVPNILEDKVRKAIADTSEEDSFSLCFKYKTRNLRKVRKDNTRKKVFHETKTGEYEEAKKQIKEKHSIISEMEPNDSDLLDSNEAKQKPFGNESDKISKEIVESCASEWSHLTLSGLSGTQMEKISPLHISCNQNNSEKDLVDTEKECTDFITSENSLPCISNIPKPEKILNEKTVVNKGGEPQHLESYEDSILAVKPAISGIPRTASLFQDINKPIFKIRESSEETSSAVFMGSMTDPNVKEETETSESNLEIYTICSQKEDSLCPSSIDDESRLATIAHTSVPLKNTGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNCSAQFESNVFQAPLSFTNDNSGLLNSSVKRNCLQNDSEEPALSLTSSCGTLLRKCCHNKSNSPNNPVISQDFDYKEAKINEEKLQPFITSEMDYLSCQQERQCENDPKSENVSAIKEKVLATACYPVVHHSEVECSGMHIQSQKSLLYNHDNTSTLTLSSKDPWSESVVISSKKESYKMSEKERRKSCKVGFELTKNIFAEKNQEVCSLNENSKNAEPLLPENYITASPSVKVQFNQNKNLSMIQKEETTLISKILDNPNSEELFQDNENFVCQVTNGRNNLILGNSKELPEADLSCVKEPFLENSTMVVHADVGDRQAVQVLITKELDSSDTVYDFPEENRNSVKQHLKVTLDQDLKPDTSLVIDKKSNKNDCMDKQAGLLNPISNHNFGGGFRTASNKEIKFSEHNIKKSKMLFKDIEEQYPASLICVESINALELRNQKKLSKPHMLVSESINTVSSYVQSSPFVSNSENNQTPPQMLFSKQNFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPNLIMQSNTFDVPANQMSLLNTTSEERKDVDLNVSSVGQVETSKKFEGAVQVKQKFTCLSENNCNKSASGYLTCENEVEFRGFYSARGKKLNVSSEALQKAVKLFGDIENISEETSTEVDPRSFSSSKCNDSIVSAFKIESHNNTNLNEKNNKCQLVLQNIEMTTDAFVDKSTENCKRNIIENDNKCVAANRKTCNLGESDSSDSGKNDTIYIHKDANDLPCTDQHNVYFKLPSQFVKEGNTQMKASLSDLTCLEIVKEEETCYVDTSNKEQLNASHMDQNRKDFEVFDISFQTASGKNIKVSKESLNKVVNFFDPKTEEELNNFFLNSKLLSGISKNKVDILSHEEIDMFKNEILKESISIDTQNQLSTLQQQPECENKKIKQATLLSFHTASGKKVKVAKESLEKVRNLFDEEKQAISKISLNSQRAKIQKDRGERTCKEGLVLACKTVEITTVPKCEEMNSLGDNVENHVSNPTAVLPKPLSDHFYRQSENISTPNVSLKVKVCENVEKETAKSPATCYTNQSPYSAVENSALAFYTGHGRKISVSQASLFKAKKWLREELGDQPEEINSDKNYVGNPSHGSGSNSIITENGKNHLPEKQDSAYLSFSSMSNYSYHSDFYCSHDSGYLSKNTTDSSIEPVVKNIEDERNINFSEVTSTVREANAYPQTVHKDTCIQKLVTNSSLCTNENTAFKLSVSNSDNFEVETPAFSTASGKIVHVSRETIKKVKEIFTDNCSKVIQMDTKSKSSTCQTRIVSDYYKTLDDSEDSLPNSTDEESSMHSHKIFADIQNVHILRDQSMLGLDKVSTLSPCDVSLKTSSLCNTGKFPELVSSTNPEIFSTASGKSIQVSESSLQQARQVFSEIEEHAKQHFSKVSFKNNEEYSDQFTREEKVIHVPQKLISQKGFSCNVVNSPAFSGFSTASGKQVSVSESALHKVKGMLEEFDLIKTDCTLQHPPTSRPGISKFPSLPCVDKRTAEYSMNSEMKKAYSTEFKLLNNFNIESNTSENNHSIKVPPYMSQFKQDKQQLVLGTKVSLVENIHILGKEQALPKNIKMGIGKTETFPDVPMKTNIEVSSTYYKDSENYFETEAVEIAKAFMEDGELTDSEPLSHAEHTRFTCQENEETVWLNSRIGKRRGDNHVSFGEPSIKRNLLNEFDRILENQEKSLKVSKSTPDGTMKDRRLFMQHVYLEPITCGPFCTTKKRQGIQNPNFTAPGQEFLSKSHFYEHLTSENSSSNLSVLGQPFYKVPATRSKEMRHSISTGKSTKIFVPPFKTKSHFHRDKQCASNTVVEENKQKQNTDEHDSGDSENNNSEIHQLNKNNSNQACEEEPLDLITSLQNARDTQDMRIKKKQRHHISPQPGSLYLAKTSSLPRISLKAAVGGRVPSACSHKQLYMYGVSKHCIKINSKNAESFQFHIQDYFGKEYLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDLEIDRSRRSALKKIMEKDDTAAKTLVLCVSDIISLSANICETSNSKTNSEDTKKVSVIELTDGWYAVKALLDPPLLALLKNGRLSVGQKIIIHGAELLGSPEACTPLEAPQSLMLKISANSTRPARWYTKLGFFPDPRPFPLRLSSLFSDGGNVGCADIIIQRTYPIQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQKRLEALFTKIQAEFEEREDNNNNNFLPFSNVATWTVPVRRYRDVCFLFQYVKWSQCYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQGLSRDVTTVWKLRIISCAKEETDSVTLSIWCPSTELYSLLTEGKRYRIYHLAASKSKIKSEKANIQLAATKKTQYQELPASDEILFQVYQPREPLHFNRLLDPDFQPPCCEVDLIGVVVSVVKKTVLGLAPLVYLSDECHNLLAIKFWIDLNEDIIKLHALIAASNLLWRPESKSGIPTLFAGDFSMFSASPKESHFQETFNKMRNTIENIDIFCKDAENKLIHMLNASDPKWCTPTKDSTSELHTAQTVLGTGNKFLISSPNSEINYQSPSSLCTPKVKLVSTPISAQMTSKSCCKGEKAIDDPKSCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSIVTKYETPIKKKELNSPQMPSPKKFIEISPLESNLIADEELALINTQALLSSSAGEDQCVSISEPPGTTTTNSKDYLRLKRHCTTSLNKEPKNPQVSTEDCATNMQDTSIIKDIS</mol_seq> | |
902 </sequence> | |
903 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">otolemur_garnettii</property> | |
904 </clade> | |
905 <clade branch_length="0.039893"> | |
906 <name>ENSMICG00000011994</name> | |
907 <taxonomy> | |
908 <id>30608</id> | |
909 <scientific_name>Microcebus murinus</scientific_name> | |
910 </taxonomy> | |
911 <sequence> | |
912 <accession source="Ensembl">ENSMICP00000010933</accession> | |
913 <name>BRCA2-201</name> | |
914 <location>GeneScaffold_1468:1090539-1158098</location> | |
915 <mol_seq is_aligned="0">LGPISLNWFDELSSEAPPYNSEPAEESEYKISSYEPHLFKTPQRKPSYRQLASTPIIFKEQGPTLSLYQSPVKELDKCRLDLGNNVANSKHKSRHTVKAKMDQADAVTSPLLNSCLSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRGEDASEIVPNDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKMLGNSFDKANSCKDHFGKSIPNALEDEVHEAVADISEEDSFSLCYSKYRTENLKKVRTGKTRKKVFHETKTGEYEEPKKQLKEKHSFASEMKPKDSDPLDSNVAKQKPFGNGSDKISKEVLESSACEWSQLTLSDNLSRTQMEKIPLLHISSCDQNNSEKDLVDSEKEYTNFITSENSLPHISSLPKPEKMLNVETVVNKGDESHEDSILVVKQISRIPSIASPFQGIKKSIFRIRESPEKTFSAVFSGNMTDPNLKEKSGTSESQLELYAICSQKEDSLCPSSIDKSWQATITDTSVPLKNAGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNYSAQFEANVFQAPRTFTNVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANKNDYMDEWVGPLYPVSNHTFGGSFRTASNKEIKFSEHNIKKSKLLFKDIEEQYPTSLNCVEIINTLALDNQKKLSKGHEFVSQSVNTVSACAQSSPFVSNCENSDIPPQMLDFNSNNNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIIPNNTFEVPANKMTVLNTTEEWKDVDLNVTINASSIGQVDNSKKFEGVVGVKQKFTYLLENNCNKSVSGYLTGENEVEFRGFYSALGKKLNVSSEAMQKAVKVFSDIENINEEPSIEVDPRSFSSSNYNDSVVSMFKIENHNNDKNLNEKNKCQLILQNNIEMTTGTFVEENIENYKRNTESENNKCTATSRNTCNIESDGHDSNKNDIVYIHEDANDLPGTDQHNLKLSSQFMKEGNTEIKENLSDLTCLEIVKAGEACHVDTSHKQLTASKIEQNIKDLGIFDISFQTASGKNISISKESLNKVNFFDQKTEEELNNFSLNSKLLSGISKNEVDILRNKETDMFENKILKESIPVGTGIQLATLQQQPECEIEKIKEAMLLSFHTASGKKVNIAKESLEKVKNLFDEKKQYIDEITSFSQGLKIQKDRGDCKEGLILACETVEITTVPKCEEMQNSLDDNEKNQVSNTVLPGPFSDHLHRQSENLKTSNDISLKVKVHENVEKETAKSPTICYTNQSPYSAIENSALAFYTGHGRRISVSEASLFEAKKWLREGELGDQLEKINTANYGGNPSQESASNSIITENDKNHLSEEQDSTYLGNSNLSNNYSCHSNSCYSHEVYNDSGYLSKNIIDSGIEPVVKNIEDKENSSFSEIISIVKEANAYPQTVHEDTCVQTLVTNSSLCKDENTSTKLSVSNSNNFEVGPPAFSTASGKIVCVSHETIKKVKELFTDNGSKVIQPNTESKSGACQTKIGAGHYKALNDSEDIIFSNSDKVVDEECCMHSHKVFADIQSEQLLHDQSMSGLEKVSKKAPCNSSLKTSSICKFNTGELPKSVSSTNACGIFSTASGKSIQVSDASLQKARQVFSEIDDSAKQLFSKISFKSNKYLDQFREKNMHIPLISPKGFSYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVEIAKAFMEDGELTDSEPSHAEHSLFTCQKNEETVCLNSRSGKRRGDDLVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKDRRLFMHHISLEPVTCGPFGTTKERQEIQSPNFTAPGQEFLSKSHFHERLALEKSSSILSISRQPFYKVPATRNEEMKRPVTTGKPTKIFVPPFKTKSHFHRDEQCVSKNINLEENKQKQNIDKHGSGDSENNINDSEIHQLNKNNSNQAATVNVTKREEEPLDLITGLKNARDIQDMRIKKKQKQHIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLTSRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLEAPESLMLKISANSTRPTCWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCADVIIQRAYPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTKQYIPSRALTRQQVHALQDGAELYEAVKNASDPGYLEGYFSEEQLRALSNHRQMLNDKKQAQIQSEFRKAMESAEQDKQGLSRDVTTVWKLRVVSYAKKEKDSVILSVWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSKKANIQLAATKKTQYQQLPASDEILFQVYQPREPLHFNRLLDPDFQPPCSEVDLIGFIVSVVKKTGLAPLVYLSDECHNLLAIRFWIDVNEDIIKPHVLIAASNLQWRPESKSGIPTLFAGDFSVFSASPKESHFQETFNKMKNTVKNIDIFCNDAENKLMHMLSNNPKWSTPTKDYTSEPYTAQ</mol_seq> | |
916 </sequence> | |
917 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">microcebus_murinus</property> | |
918 </clade> | |
919 </clade> | |
920 <clade branch_length="0.004582"> | |
921 <confidence type="bootstrap">63</confidence> | |
922 <taxonomy> | |
923 <id>376913</id> | |
924 <scientific_name>Haplorrhini</scientific_name> | |
925 </taxonomy> | |
926 <clade branch_length="0.06932"> | |
927 <name>ENSTSYG00000000478</name> | |
928 <taxonomy> | |
929 <id>9478</id> | |
930 <scientific_name>Tarsius syrichta</scientific_name> | |
931 </taxonomy> | |
932 <sequence> | |
933 <accession source="Ensembl">ENSTSYP00000000441</accession> | |
934 <name>BRCA2-201</name> | |
935 <location>GeneScaffold_7779:11488-76077</location> | |
936 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPLYNSEPTEEPEYKISSYEPNLFKTPQRKPSFHQLASTPIIFKEQGLTLPLYQSPVKELSKYSLELGRNIANSKHKSHHTVKIKRDEADDVTSPLLNSCLRESSDVLQCTHVSSQKDKSVVCGSLFHTPKFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPTLSSTVLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKMLGNSFGKVNSCKDHFGESMPSVLEDEVHETVVDTSEEDSFLLCFPKCRTGNLQKNRTEKTRKTNLYEAKTEECEEVKKQMEEQHLLGSEMELNVSDPLDSVIADQKPFGNGSGRISKEFVPSSACEWSQLTLSGLNGTQVEKIPLLCSSCDQNNSEKDLIHTEKECIDFITSENSLPHISSLPQSEKKLSKETVVNKRDEEQHIETHEDSILAVKRAGSGTSPTAFPYQGIKKSIFRIRESPEETFSTIFSGNMSNRCFKEGTEASESELEIHSVCSQKEDSLCTCPVDNGIWPTTIIHSCVTSKNTGLISTLKKKTNKFIYAISGEASYQKKIQKDQKSDTDRSSQLAASTFNASLXXXXXXXXLLHSSVKRNSLQNDSEEPTLSLTNSFGTISRKCPNKETSSNNTVISQDLDYKEAKINKEKLHSFIIPEPDYLLCFQEGKCENNPKSRKIFDTKEKNLAATGHPAVQHAKVDCSGIFRSQESLLYDHDSASTLILTPTSKNSSSNLVVISKGKESFKMSDKLQCKNCETDFELTKNIPMEKNQEIPALSEHSKNVELLPPRKHLTVQVNQNTNLTITQKEQQTTLISKITVNSNSEELFSDNENNFVFQVTNERGNPVLENTKELHEVDLSCVKEPILENSTMVAFAGINDKQTAQVSIKKDLDSSDIDYGFIEDRNSVKQHLKLTRGQDLESEISLDINKISNKNNDYMDKWAELLDPISNHSFGGSFRTASNKEIKLSECNIKSKILFDIEEQYPTSLACVEIVIVELDSQKKLSKTHAFVSQSVNTVSVHAQSSTIVSDCKNGHPTPQMLFLKGDFNSNHNLTPSQKAEITELSSILEESGSQFEFTQFRKPSHIILNNTFEALENQMTDLNTTSEKWKDVDLHRTINAPSISQVHSSRKFEGAVGVKQKFACLLENNCNKSASGYSTDENEVEFRGFYSARGKKLNVSNEALQKAVELFSDIENINEKTFTEVDPRSSSSGKYHDSIVSMFKIENHNNDRNFDEKNNKCQLTSPNNTEVTTGTSIKENIENYKRNTENENNKHTASDRRNTCNSGESNVSDSSRNETVYIHKDENDLPCTDQHNISLKLSSHFMKKGNIQIKEHLSDLTCLEVVKAEETCQVNTSNKEQLTTCKMEQNIKDFETFDISFHTASGKKIRVFKESLNRVVSFFDEKPEEELNNFSLNSKLLSGIKKNKVDILSHEETDLAKNKILKESIPVGTGNQFGTLQQQPDCDLGKVKEATLWSFHTASGRKVKITKESLYKVKNLFDEKQDISEIISFSHQEAKTLNDRQDCKEELKLACETSEVTTVPKCEEIQNSLDDGRNLVSNETAVLPRLLSDNLRRQSENLKASNSKSLKVKVHENVEKETARSPTPCYTDQSPYSAIENSALGFHTGHGRKISVSQASLLKAKKWLREGELDDQPEKINTAGYIENPPCENNLSSSMTENDKNHLSEKQNSTYLSNSSLSNSNSYLSDFCYSEEIYNDSGYLSKNKMDSGFELVVKNVEAKRNSSCPEVMSTMREANMNPKTVNEDTCVQNLVTNSLPCKNKNATIKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPIKRNLLNEFDRIIENQEKSLQASKSTPDGTIKDRRLFMHHISLEAVTCGPSCTTNKRQEKQNPNFTAPGQEFLSKSHFYEHRTLEKSSSNVSVSGQPFFKVPGTRNEKMAPSITAGKLTKVFVPPFKTKSHFHRDEEGTNLEENKQKQDIDKYGSGDSDNNINDSEIHPSNTNNSNQAANVIFTKCEEEPLDLTTSLQTARDIQDMRIKKKQRQRVFPLPGSLYLAKTSTLPRISLKAAVGGQVPSACSHNQLYMYGISKHCVKINSKNAESFRFHTQDYFGKESLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAKKIMERDDTAKTLLCVSDVISSINVSETSDSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTPLEAPESLMLKISANSTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTKRHIPSRALTRQQVRALQDGAELYEAVKNAPDPGYLEGYFSEEQLRALNNHMQMLNDKKQAQIQSEFRKAVESAEQGERSLSRDVTAVWKLRIASYANREKDSVILSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKSERAGIQLAATKKTQYQQLPASDELLFHVYQPREPLHFSRLLDPDFQPPCSEVDLIGFVVSIVKKTGLAPLVYLSDECQNLLAVKFWTDLNEDIIKPHMLIAASNLQWRPESKSRIPTLFAGDFSVLSASPKESHFQDTFNKMKNTIENIDIFCSEAENKLMHMLNVNDPRWSTPIKGCTSELHTAQTVLVTGNKLLMSSPNNEINHQNLLSLSTPKGKFVSIPVSVQMTSKSCCKGEKEVDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCDSKYEIPLKKALSSPQMTPLKKFNKLSLLESNSIADEELALINTQALLSGSTGGNQLVSISEASRTAPTNAKDDLGLKRHCVASLIKEQNDSQAGTEERESNGQDTRTEKHI</mol_seq> | |
937 </sequence> | |
938 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tarsius_syrichta</property> | |
939 </clade> | |
940 <clade branch_length="0.032464"> | |
941 <confidence type="bootstrap">100</confidence> | |
942 <taxonomy> | |
943 <id>314293</id> | |
944 <scientific_name>Simiiformes</scientific_name> | |
945 </taxonomy> | |
946 <clade branch_length="0.008398"> | |
947 <confidence type="bootstrap">74</confidence> | |
948 <taxonomy> | |
949 <id>9526</id> | |
950 <scientific_name>Catarrhini</scientific_name> | |
951 </taxonomy> | |
952 <clade branch_length="0.011844"> | |
953 <confidence type="bootstrap">99</confidence> | |
954 <taxonomy> | |
955 <id>9528</id> | |
956 <scientific_name>Cercopithecinae</scientific_name> | |
957 </taxonomy> | |
958 <clade branch_length="0.004946"> | |
959 <name>ENSCSAG00000017920</name> | |
960 <taxonomy> | |
961 <id>60711</id> | |
962 <scientific_name>Chlorocebus sabaeus</scientific_name> | |
963 </taxonomy> | |
964 <sequence> | |
965 <accession source="Ensembl">ENSCSAP00000013938</accession> | |
966 <name>BRCA2-201</name> | |
967 <location>3:11071682-11155213</location> | |
968 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKDQGLTLPLYQSPVKELDTFRLDLGRNVPSSRHKSLRIVKAEMHQADDVTCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEESSETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVCETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLSTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESQRDYILAVKQAVSETSPIASSFQGIKKSIFRIRESPKETFSASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTKFIYAIHDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVKRSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEKLQLFITPEADSLSFLQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSPLYDHENASTLILTPTSKDVLSNLLMISRGKESYKMSDEIKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRGASPSRKVQFSQNTNLRVIQKDQEETTLIPKITVHPDSEELFSDNENNFLFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNIVYDLAEENKNSVKQHLKMTLGQDLQPDILNIDKIPDKIDDCMDKWAGPLDPISNHSFGGSFRTASNKEIKVSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSEENRDAGLVIMNAPSIGQVNSSKQFEGTVGIKQKFAGLLKSDCNKSASGYLTDENEVEFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSVFKIENHNDKTVSEKNKCQLMLQNNIEMTTGTFVEEITENYKINTENEDNKYTAASRNSRNLEFVSSDSSKNDTVCIHKDEKDLPFTDQRNICLKLSGQLMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFGISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEEIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSSSHQWAKTLKYREACQDLELACETVEMTTAPKCKEMQNSLNNDKNLVCIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPTTCYTNQSPYSVIENSALAFYTSCSRKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSYSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKNTSFSKVISSVKDANTYPQTVNEGICVEELVTSSSPCKNKNAAIKLSISNCNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFGKVIKENNENKSNICQTKIVAGCYEALDDSEDIFHNSLDSDECSMHSHKVFADIQSDEILQRNQNMSGLEQVSKMSPCDVSLETSDICKCSIGKLPKSVPSTNTCGIFSTASGKSVQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTTIHTPKHLISSQKDFSYNVVNSSAFSGFSTASGKQVSISESSLHKVKGMLEEFDIIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKACSKEFNLSNNFNVEGGSSENNHSIKVSPSLSQFKQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDGELTDSELPSHATHSLFTCPQNEEMVLSNSRIGKRRGEALISAGEPPIKRNLLNEFDRIIENQEKSLKPSKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNVAVSGHPFYQVSATRNEKMRHLITTGKPTKVFIPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAATVIFTMCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKISSKNAESFQFYTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLIALLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEEDTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGNFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAVTKKTQYQQLPVSDEILFQVYQPREPLHFSKFLEPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPIKDCTSESYTAQIIPGTGNKLLISSPNCELYYQSPLSLCMAKRKSVSTPVSAQITSKSCKGEKEIDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVNESTRTTPTSSKDYLRLKRRCTTSLIKEQESSHSGKEECENNKQDTIITKKY</mol_seq> | |
969 </sequence> | |
970 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">chlorocebus_sabaeus</property> | |
971 </clade> | |
972 <clade branch_length="0.000661"> | |
973 <confidence type="bootstrap">99</confidence> | |
974 <taxonomy> | |
975 <id>9528</id> | |
976 <scientific_name>Cercopithecinae</scientific_name> | |
977 </taxonomy> | |
978 <clade branch_length="0.001779"> | |
979 <name>ENSMMUG00000007197</name> | |
980 <taxonomy> | |
981 <id>9544</id> | |
982 <scientific_name>Macaca mulatta</scientific_name> | |
983 </taxonomy> | |
984 <sequence> | |
985 <accession source="Ensembl">ENSMMUP00000009432</accession> | |
986 <name>BRCA2-201</name> | |
987 <location>17:11687584-11777925</location> | |
988 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKDQGLTLPLYQSPVKELDTFRLDLGRNVPSSKHKSLRTVKAEMHQADDVTCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLNTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHRDYILAVKQAVSETSPMASSFQGIKKSIFRIRESPKETFSASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTNKFIYAIRDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVKRSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEKLQLFITPEAHSLSFPQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSPLYDHENASTLILTPTSKDVLSNLVKISRGKESYKMSDELKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLIPKITVNPDSEELFSDNENNFVFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNTVYDLAEENKNSVKQHLKMTLDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSEENIEAGLVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVEFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSMFKIENHNDKTVSGKNKCQLILQNNIEMTTGTFVEEITENYKINTENEDNKYTAASRNSRNLEFVGSDSSKNDTVCIHKDEKDLPFTDQHNICLKLSGQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFDISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEKIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETVEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDHLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSCSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKNTSFSKVISSVKDANTYPQTVNEGICVEELVTSSSPCKNKNAAIKLSISNCNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFGKVIKENNENKSNICQTKIVAGCYEALDDSEDIFHNSLDSDECSMHSHKVFADIQSEEILQHNQNMSGLEQVSKMSPFDVSLETSDICKCSIGKLPKSVPSTNTCGIFSTASGKSVQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTTIHTPKHLISSQKDFSHNVVNSSAFSGFSTASGKQVSISESSLHKVKGMLEEFDIIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKACSKEFNLSNNFNVEGGSSENNHSIKVSPSLSQFKQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDGELTDSELPSHATHSLFTCPQNEEMVLSNSRIGKRRGEALISAGEPPIKRNLLNEFDRIIENQEKSLKPSKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGKPTKVFIPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAATVIFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKINSKNAESFQFYTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAIKAQLDPPLLAILKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAVTKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNIVENIDILCNEAENKLMHILHANDPKWSTPIKDWTSESYTAQIIPSTGNKLLISSPNCELYYQSPLSLCMAKRKSVSTPISAQITSKSCKGEKEIDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKNETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTTPTSSKDYLRLKRRCTTSLIKEQESSHSDKEECENNKQDTITTKKYE</mol_seq> | |
989 </sequence> | |
990 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">macaca_mulatta</property> | |
991 </clade> | |
992 <clade branch_length="0.00613"> | |
993 <name>ENSPANG00000013323</name> | |
994 <taxonomy> | |
995 <id>9555</id> | |
996 <scientific_name>Papio anubis</scientific_name> | |
997 </taxonomy> | |
998 <sequence> | |
999 <accession source="Ensembl">ENSPANP00000002726</accession> | |
1000 <name>BRCA2-201</name> | |
1001 <location>17:11280025-11304342</location> | |
1002 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPVSLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKERGLTLPPYQSPVKELDTFRLDLGRNVPSSRHKSLRTVKAEMHQADDVTGPLLNSCLSESPVVLQCTHVTPQRNKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLNTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHKDYILAVKQAVSETSPMASSFQGIKKSIFRIRESPKETFNASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVERSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEELQLFITPEADSLLFLQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSSLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDELKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLIPKITVNPNSEELFSDNENNFVFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNIVYDLAEENKNSVKQHLKITLGQDLQPDILNIDKIPDKNNDCMDKWAGPLDPISNHSFGGSFRTASNKEIKVSEHNIKKSKMFFKDIEEQYPASLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSVENRDAGLVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVAFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSMFKIENHNDKTVSGKNKCHLMLQNNIEMTTGTFVEEITENYKINTENEDNRYTAASRNSRNLEFVGSDSSKNDTVCIHKDEKDLPFTDQHNICLKLSGQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFDISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEKIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETVEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDHLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSTKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSYSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKTLVFPK</mol_seq> | |
1003 </sequence> | |
1004 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">papio_anubis</property> | |
1005 </clade> | |
1006 </clade> | |
1007 </clade> | |
1008 <clade branch_length="0.003225"> | |
1009 <confidence type="bootstrap">74</confidence> | |
1010 <taxonomy> | |
1011 <id>314295</id> | |
1012 <scientific_name>Hominoidea</scientific_name> | |
1013 </taxonomy> | |
1014 <clade branch_length="0.011887"> | |
1015 <name>ENSNLEG00000001048</name> | |
1016 <taxonomy> | |
1017 <id>61853</id> | |
1018 <scientific_name>Nomascus leucogenys</scientific_name> | |
1019 </taxonomy> | |
1020 <sequence> | |
1021 <accession source="Ensembl">ENSNLEP00000001277</accession> | |
1022 <name>BRCA2-201</name> | |
1023 <location>GL397329.1:5273331-5357426</location> | |
1024 <mol_seq is_aligned="0">MPIGSKERQTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYRSPVNELDKFRLDLGRNVPNSRHKSLHTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVRGSLFHTPKFVKGRQTPKHISESLGAEVDSDMSWSSSLATPPSLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIPSVTDSENTNQREATSHGFGKTLGNSFKVNSCKDHIGKSMPNVLEDELYETVVDTSEEDSFSLCFPKYRTRNLQKVRTSKTRKKIFREANADECEKSKNQVKEEYSFVSEVQSNDTDPLDSNVANQKTFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNISEKDLLDTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEKHLESHRDCILAVKQAISATSPVASSFQGIKKSIFRIRESPKETFNASFSDHMTDPNFKKETEASESGLEIHTVGSRKEDSLCPNSIDNGSWPATTTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYQGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTVLRKCSRNETCCSNNTIISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEILATACHPVQHSKVEYSDTDFQSRKSLLYDHENASILILTPTSKDVLSNLVMISRGKESYKMSDKVKGNNYETEVELTKNIPMEKNQDVCALNENSKNVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLISKITVNPDSEEHFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTVVLYADIGDKQATQVSTKKDLVYDFAEENENSVKQHLKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHNFGGSFRTASNKEIKLSERNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVSDCKNSHINPRMLFSKQDFNSNHNLTPSQKAEITELSTMLEESGSQFEFTQFRKPSYILQKNTFEVPENQMTILNTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVEFRGFYSAHGSKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKCHDSVVSMFKIENHSDKTVSEKNNKSQLILQNNIEMTIGTFVEEITENYKRNTENEDNKYTVASRNSHNLEFDGSDSGKNYTVCIHKDETDLPFTDQHNICLKLSDQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETSDKSFQTASGKNISVTKQSFNKIVNFFNQKPEELHNFSLNSELHSDIRKNKMDILSHEETDIVKNKILKESVPGGTGNQLVTFQEQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTIEITSFSHQRAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNDKNLVSIETVVPPKLLSDNLCSQTENLKTSKSIFLKVKVHENVEKETAKSPAACYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDSQPERINTADYVGNSLYENNSNNTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYISKNKLDSGIEPVLKNVEDQKNTSFSEVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFSKVIKENNENKSKICQTKIVAGCYDDCMDDSEDIFHNSLDNDECSMHSHKVFADIQSEEILQHNQNMSELEKVSKISPCDVSLETSDICKCSIGKLPKSVSSTNTCGMFSTGSGKSIQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIHTPKHLISSQKGFSYNVVNSSAFSGFSTASGRQVSISESSLRKVKGMLEEFDLIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFKQDKQQLVSGAKVSLVENIHVLGKEQASPENVKMEIGKTETFSDVPVKTNTEVYSTYSKDPENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPKNEEMVLSNSRIGKRRGEALISVGEPPIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTTPGQEFLSKSHLYEHLTLEKSSSSLAVSGHPFYQVSAARNEKMRHLITTGKPAKVFVPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAAAVIFTKCEEEPLDVITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGCQVPSACSHKQLYTYGVSKHCVKINSKNAESFQFHTQDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSADTSETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPTQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHVLIAASNLQWRPESKSSLPTLFAGDFSMFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSEPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSASTPVSAQMTSKSCKGEKEIDDQKKCKKKRALDFLSRLPLPPAVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQITPFKNFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSKDYLRLKRQCTTSLIKEQESSQAGTEECEQNKQDTITTKKYI</mol_seq> | |
1025 </sequence> | |
1026 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">nomascus_leucogenys</property> | |
1027 </clade> | |
1028 <clade branch_length="0.002773"> | |
1029 <confidence type="bootstrap">100</confidence> | |
1030 <taxonomy> | |
1031 <id>9604</id> | |
1032 <scientific_name>Hominidae</scientific_name> | |
1033 </taxonomy> | |
1034 <clade branch_length="0.007654"> | |
1035 <name>ENSPPYG00000005264</name> | |
1036 <taxonomy> | |
1037 <id>9601</id> | |
1038 <scientific_name>Pongo abelii</scientific_name> | |
1039 </taxonomy> | |
1040 <sequence> | |
1041 <accession source="Ensembl">ENSPPYP00000005997</accession> | |
1042 <name>BRCA2-201</name> | |
1043 <location>13:31850770-31940736</location> | |
1044 <mol_seq is_aligned="0">MPVGSKERPTFFEIFKTRCNKADLGPISLHWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFRLDLGRNVPNSRHKSLRTVKTKMDQADDVSCPLLSSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKYVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDENLKKNDRFIPSVTDSENTDQREATSHGFDKTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVADTSEEVSFSLCFSKYRTRNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHRDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNSIDNGSWPATTTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYKGKKMPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNEEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQDSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDICASNENDKNVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFLDIENDFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDIGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDVLNIDKIPDKNNDYMDKSAGLLGPISNHSFGGGFRTASNKEIKLSEHNIKKSKMFFRDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLPSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQMTILNTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSAAGYLTDENEVGFRGFYSAHGAKLNVSTEALQKAVKLFSDIENIGEETSAEVDPISLSSSKCHDSVVSMFKTENHDKTVSEKNNICQLILQNNIEMTSGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKGFETFDTSFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSHEETDIVKNKILKESVPVGTGNQLVTFQEQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTCEITSFSHQWAKTLKYRDARKDLELARETIEITTAPKCKEMQNSRNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLTEAKKWLREGIFDGQPERVNTADYVGNSLYESNSNTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVHNDSGYLSKNKLDSGIEPVLKDVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCENKNAAIKLSISNSNNFAVGPPAFRIASGKIICVSHETIKKVKDIFTDSFSKVIKENNENKSKICQKKIVAGCYEALDDSEDILHNSLDNDECSMHSHKVFADIQSEEVLQHNQNMSGLEKVSKISACDVSLETSDICKCSIGKLPKSVSSTNTCGIFSTASGKSVQISDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTRQENTAIHTPENLTSQKGFSYNVVNSSAFSGFSTASGKQVSILEGSLHEVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPCVDKRNPEHSVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQTSPENVKMEMGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPKNEEMFLSNSRIGKRRGEPLISVGEPPIKRNLLNEFDRIIANQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSRLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMKHLITTGKPTKVFVPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDTEIHQFIKNNSNQAAAVIFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKENLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKFQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENVDILCNEAENKLMHILHANDPKWSTPSKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSFCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSKDYLRLKRRCTTSLIKEQESSQAGTEECEKNKQDTVTTKKYI</mol_seq> | |
1045 </sequence> | |
1046 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pongo_abelii</property> | |
1047 </clade> | |
1048 <clade branch_length="0.004997"> | |
1049 <confidence type="bootstrap">100</confidence> | |
1050 <taxonomy> | |
1051 <id>207598</id> | |
1052 <scientific_name>Homininae</scientific_name> | |
1053 </taxonomy> | |
1054 <clade branch_length="0.019894"> | |
1055 <name>ENSGGOG00000015808</name> | |
1056 <taxonomy> | |
1057 <id>9595</id> | |
1058 <scientific_name>Gorilla gorilla gorilla</scientific_name> | |
1059 </taxonomy> | |
1060 <sequence> | |
1061 <accession source="Ensembl">ENSGGOP00000015446</accession> | |
1062 <name>BRCA2-202</name> | |
1063 <location>13:14169243-14261094</location> | |
1064 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKAVDLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREATSHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKISHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLNISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFGASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQTSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRNETCSNDTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNPTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQLDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGAKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLREAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASDETIKKVKDMFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSTNTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPENEEMVLSNSRTGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKEHQEIQNPNFTAPGQEFLSESHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSSDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKVKQLKFLCSFWEVQRSFLSLNNAFPIKKSLFYSGLENYILVLFKLLRTSSLQWLSFSCFLLIGFIYQKEQQQLGLSFLLILFLAASAQYSRVHDIYINHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPANLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEVRKAMESAEQKEKGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVISVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTR</mol_seq> | |
1065 </sequence> | |
1066 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gorilla_gorilla</property> | |
1067 </clade> | |
1068 <clade branch_length="0.000207"> | |
1069 <confidence type="bootstrap">100</confidence> | |
1070 <taxonomy> | |
1071 <id>207598</id> | |
1072 <scientific_name>Homininae</scientific_name> | |
1073 </taxonomy> | |
1074 <clade branch_length="0.003163"> | |
1075 <name>ENSPTRG00000005766</name> | |
1076 <taxonomy> | |
1077 <id>9598</id> | |
1078 <scientific_name>Pan troglodytes</scientific_name> | |
1079 </taxonomy> | |
1080 <sequence> | |
1081 <accession source="Ensembl">ENSPTRP00000009812</accession> | |
1082 <name>BRCA2-201</name> | |
1083 <location>13:31957353-32040817</location> | |
1084 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLCTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREATSHGFGKTSGNSFKVNSCKDHTGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQTSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQNNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTISEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTSVEEITENYKRNTENEDNKYTASSRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNNLSAKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTINEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSTNTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLVTTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQAAAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAFPWGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAEKKLMHILHANDPKWSTPTKDCPSGPYAAQIISDTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESAQASTEECEKNKQDTITTKKYI</mol_seq> | |
1085 </sequence> | |
1086 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pan_troglodytes</property> | |
1087 </clade> | |
1088 <clade branch_length="0.001811"> | |
1089 <name>ENSG00000139618</name> | |
1090 <taxonomy> | |
1091 <id>9606</id> | |
1092 <scientific_name>Homo sapiens</scientific_name> | |
1093 </taxonomy> | |
1094 <sequence> | |
1095 <accession source="Ensembl">ENSP00000369497</accession> | |
1096 <name>BRCA2-001</name> | |
1097 <location>13:32315474-32400266</location> | |
1098 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQNSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPEKNNDYMNKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVAKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITAAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSANTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPKNVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSKLPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQAVAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESSQASTEECEKNKQDTITTKKYI</mol_seq> | |
1099 </sequence> | |
1100 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">homo_sapiens</property> | |
1101 </clade> | |
1102 </clade> | |
1103 </clade> | |
1104 </clade> | |
1105 </clade> | |
1106 </clade> | |
1107 <clade branch_length="0.036115"> | |
1108 <name>ENSCJAG00000018462</name> | |
1109 <taxonomy> | |
1110 <id>9483</id> | |
1111 <scientific_name>Callithrix jacchus</scientific_name> | |
1112 </taxonomy> | |
1113 <sequence> | |
1114 <accession source="Ensembl">ENSCJAP00000034250</accession> | |
1115 <name>BRCA2-201</name> | |
1116 <location>5:145430371-145527428</location> | |
1117 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKAVDIGPISLNWFEELSSEASPCNSEPTEESEHKISVYEPNIFKTPQRKPSYNQLASTPIIFKEQGLTLPPYQSPVKELDKFRLDLGRKVPNGRHKSPRTVKAKMDQTDDVTCPLLNSCLSESPVLQCTHVTPQRDKSVVCGSLFHTPKFVKGHQTPKHISESLGAEVDPDMSWSSSLATPPSLSSTVLIVRNEEASETVFPHDTTAIVKCCFSNHDESLKKNSRFIPSVTDSENTNQREATCHGFGKTLGNSFGKVNSCKDYIGKSMPNVLEDEVYETIVDTSEEDSFSLCFSKCRKRNLQKVRTEKTRKKIYEANTDECEKSKSQVKEKYSFVSELEPNDTDPLDSNVANQKLFESASDKISKEVVPSLAYERSQLTLSGLHGTQMEIIPLLHISSCDQSNSEKNLLDAENERKKDFLTSENSLSDISSLPKSEKPLNEERMVNKKDEEQHLESDGDHILAVKQATSGNPLVASSFQGIKKSIFRIRESPKETLSASFSGSMSDPNVKKETEASESRLEIHTVCSWKEDTLCPDSIDNGSWPASITQTSVVLKNAGLISTLKKKTNKFIYAIHDETSYQGKKIQKDQKSEVINSSSQFEANAFEAPLTFANTDSGLLHPSVQRNCSQIDSGEPTLSLTSSSGTILRKCTRNETCCNNIIISQDLDYKEAKCNKEKTQLFITPEADSLSCLQEGQCKNYPKSKEVSDIKEEVLATACHLAQHSEVEYCDTDFQSQKTILHDHENASSLILTPAFKDVLSGKESYRISDELKCNNCEADFELIKNISMENNQDVHALNENSKNIELLPPEKYIIVASPSRYVQFNQNTNLRVIQKDQEETTLISKMTVSPDSEELLSDNENNFVFQVASERNNFALESTEELHEADLTCVNKPNFENSTMVLHADIVDKQATQVSIKKDLDSSNKVYYLAEEKKNSVKQHLEMTLGQDIKSDISLNIDKIPNKNNDYKDKWAGLLHPISNHSFGGSFRTASNKEIKLSEHNIKKSKMLFRDIEEQYPTSSACVEIVNTLALDNQKKLSKPQSIKTVSAHVQSSVVGFDCKNSLTTPQMLFSKEDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQYRKPSYILQNNMFEVPENQMTILNSTSEEYRDADLHLVMNAPSIGQVDSRKQFEGTVGIKQKFAVLLKNDCNKSASGYLTDADEVELRGFYSAHGVKLNVSTEALQKAVKLFSDIESISEETSAAVDPISLSSSKCHDSVVSVFKIENHDEKNNECQLILQNNIEMTTGTFVEEITENYKKNIENEDKHTATSRNTHNLEFDGSDSSKNDTVHIHKDENDLPLTNQHNIYLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQETCHGNTSNKEQLTATKMEQNIKDVGTFDLSFQTASGKNISISKESFNKVVNFFDQKPEELHNFSLNSKLHSDIRKNKMDILSYEETDIVKNKTLKESIPVGTGNQLVTIQEQPKSNIKKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKGQDTGEITSFSHQGAKTLKYREAYKDLELVRETVEIATTRKHEEMQNSLSNDKNLVSIETVVPPKPLSDNLYRHTESLKTSEGNFLKVKEHENVEKETAESPATCYRNQSPYSVIENSALAFYTYCSRKTSVSQASSLEAKQWLREGEFDDQPENINTVDFVGNSLYENNSNNTITEGNKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYRSKNNLDSGIEPVVKNVEDQKNTRSSKVTFNVKDANAYPQTVNEDTCVEELVTSSSSCKNKNAAIRLSTSNCNNSEVGPHAFSTASGKIVCVSHETIKKVKEKFTDSCSKVIKENTENKSNNCQTKILAGCYKALNESEDIFHNSSGNDECSMHSHKVFADIQSEEILQHNQKMFGVEKVSEIPPCDVSLETSGIYKFSMGKLPKSVLSTNTCGIFSTASGKSVQVSNASLQKARQVFSEIDDSTKQLSSEVLFTNNEHSDQLTREENTATQIAEHLIPSQKGFSYNVNSSAFSGFNTASGKQVSISESALHKVKGMLEEFDLIRTEHSLHHSPISRQNVSKILPCVVKRNPEHCVNSEMEKTCSKEFKLSNNFNIEGGSSEHNQSIKVSPYLSQLKQDKQQLVLGTKVSLVENIDVLGKEQASLENIKMEIGKTETFSDVSVKTNTEVCSTYSKDSENCFETEAVEIAKAFMEDDELIDSELPSHASHTLITCPKNDEMVLSNSRIGKRRGEAIISVGEPPIKRSLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFTHHVSLEPITCVPFCTTKERQKIQNLNFTAPGQESLSKSHLYEHLTLEKSSSSLAVSGQPFYQVPATRHEKMRRLIATGKPTKVFVPPFKTKSHLHRDEQCVRNINLEENKPKQNIDGHGSGGGKNKINDSEIHQLNKNNSNQAATVIFTKREEEPLDLITSLQNARDIQDMRIKKKQRQCIFPQPGSLYLTKTSTLPRISLKAAVGSQFPSACSHKQLYMYGVSKHYVKINSKNAESFQFHTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDKSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQNVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKHAEAQQKRLEALFTKIQEEFEEHEENKTKPYLPSRALTRQQVHALQDGAELYEAVKNAADPAYIEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRNVTTVWKLRIVSYSKKAKDSVILSIWRPSSDLYSLLTEGMRYRIYHLATSKSKSKSERANIQLVATKKTQYQQLPASDEILFQVYQPRESLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKQGHFQETFNNLKNTVENIDIFCNEAENKLMHILQANDPKWSTPTKDYNSEPHTAQIILPAGNKLLMSSPNCDINYQSPLSLRMPKSKSVSTPVPAQMTSKSCKGEKEIDDQKSCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQVTPFKKFNEISLLESNSIADEELALINTQALLSGSIGEKQFISVSEFTRTAPTSSKDCLRLKRCSTTSLIKEQESSRAGTEECENDMQDTSTTEK</mol_seq> | |
1118 </sequence> | |
1119 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">callithrix_jacchus</property> | |
1120 </clade> | |
1121 </clade> | |
1122 </clade> | |
1123 </clade> | |
1124 </clade> | |
1125 </clade> | |
1126 </clade> | |
1127 </clade> | |
1128 <clade branch_length="0.047366"> | |
1129 <confidence type="bootstrap">65</confidence> | |
1130 <taxonomy> | |
1131 <id>311790</id> | |
1132 <scientific_name>Afrotheria</scientific_name> | |
1133 </taxonomy> | |
1134 <clade branch_length="0.017597"> | |
1135 <confidence type="bootstrap">65</confidence> | |
1136 <taxonomy> | |
1137 <id>311790</id> | |
1138 <scientific_name>Afrotheria</scientific_name> | |
1139 </taxonomy> | |
1140 <clade branch_length="0.07083"> | |
1141 <name>ENSLAFG00000002670</name> | |
1142 <taxonomy> | |
1143 <id>9785</id> | |
1144 <scientific_name>Loxodonta africana</scientific_name> | |
1145 </taxonomy> | |
1146 <sequence> | |
1147 <accession source="Ensembl">ENSLAFP00000002234</accession> | |
1148 <name>BRCA2-202</name> | |
1149 <location>scaffold_11:4649923-4713848</location> | |
1150 <mol_seq is_aligned="0">MPVGFKERPTFFEIFKAQCSKADLGPVSLNWFEELSSEAPPYKSERAEEAEYKISSYGSNPFKTPQRKPYYNQLASTPIIFKDQGITPALYQSPLNISGKDIASSKQSRFSVRAEMSQAKDVTSPPLNPCLSESPVLRCMHVTPQREKSVLCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEAPETVFPDDSAISKNHFSNHNKSLKKNDQFIPSVPDSENENQGEVISRELGNFLGEVNSCEDHPEGGAPSALEEEGHETVAHISEEDSFSLCVSKYKTGNLQKVKTDKTRKKYFNKTKAGECEEAKKLEESRHLFAFEMEPNDSDPLGSSAPGEEPTGNIGHTVSKELVASSASEWPQLTLSGLNGTQMERIPLLPTSCDQNNSEKDLIGTEEECANFTTSENSLSRISRLPKTEKLLNEERVVNKSEEEQSPLSHKDSILAVKQTASGTSPVASLSQGITKSIFKIRESPDVAFGVVFSDNMTDSNLKEKPEAPESGLEIGANCSQRWGSLCPSLVGNGSCPVTTKHASVTLKNAGLISTLKKKTKKFIYSVNDKTSYPGEKMQKDQESEPTHCSAQFEAPLTFLNSGSGLLHSSVKKNSSQNDTEGPTLSLTSSFKTILRKSSNNESSCNNKVISQDLDYKATEVNTEEPLSPVTTGPDCPSCLQESHGDGDPTGQRASDVKRKVLAAAHRPAVRHSEVELSGVHFQLQKSFLYDHHNASSLGLTPRSKDPLSNSVVISRDKESYKMSEELKHKNREATFELTKNIPLEKNQEMFVLNENSKKAELSPPEKYMKVASHFVKVQFNQNIDVTVISKEQEETALISKITIDPNSKELFPENEDNCVFQMTNKRNTAILEDIKGLPKASFGCVKEPVLKSPTMVVYSDIGDERAAQLLLTEGDDSSDVVRDLTEENRNREKQHLKMTLSQHVKSDVSLEVDRKSSRNNSYVGRRAGLLDPVSNYSFGGGFRTASDKEIKLSEHNIKKSKALFKDIEDQYPESLACVEIVNPLSLDDQKKLNRPHALDWQTLKTASGDEWNSVFVSDNRSGRTAPQILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSRILENNTCERSENQITVLNNSSEGWKDVARGVTTNAPPTSQVDNSKKWDGAVGDKQKVAGLLKSNSDESASGCLTHKNKEKFTGFCSALGTKISVSGEALQSALKLFRDIEDVREDASAEVDRGGSSRSQCASVVSVSELKNFNSDENLSEKHSKCHVILQNNIDITTGMFVEWNTDSCKRNTDEEDKCTGTSRNACNLGESNGNESSRNDTVCIYEDENALPCMTDQHDVYLEVPRQFIKEGNNEIKEGVSDLTCLEVVKAEETFHVDSSDKQSASNKMGQNVKNFDICDLPIQAANRKNIRVSKESLNKVVSLFDKKYAEEELSNFSDSLSSELLSDLNNKMDSSSNEERNTVKNKIWEGSNPVGTENKLLTVHRQPKCEIEKTREPTMLGFHTASGKKVKIAKQSLDKVKNLFDENEQDNSSEVFSFPHQGAKTVKEIEECKEGLELACETVETTTFSKSEDMVNSLGDNKRGVFSDETMELVNDHLCSHTENLKTSSSVSSEVEVHENVEKETAKSPTTCFRNRSTCSASENTALAFYTGRGRQISVSQTSLSEAKKWVREGELEDQPGKINAAKVACLKEHPQGCVGNPSYGNSSDSIITENDKNHLSEKQDLSYLSNNCLHNSDLCHSDEVHNESGYLSKNKMDNGGIERVVKNVKDRKSTSVSEVTSTVRKANTNPQTGNEDICAQKLVTGTSPCKNENVATEFVISDLNNFEVGPPVFSTASGETIKRVSEIFADSSSKVVQQNTESKSDADKTKPVADCSAELDGPEGDAFPNPLGGEECSMHSREALDDIHSAQILPHNQSMSELDKVCEIRPCQVNLKTSDVCKLNTGMLPKSLSSTNACGIFSTASGKSVQVSDASLQKTRQVFSEIEESTKYLFSKLSFKSNEDSNKFTKEKNTVIHTKNKLLPPQEGFSSSVNALHKAKEMLEEFDRITTECSHHLPTSRQDVSKTPPPIGKRIPKHPVNAKMEKTYYKEFRFSNNSNVENGSSETDHPIKASPHLCQSKQEVSLVENVHLLAKEQTLPRNIKMEISKIKTFSNLPVKTNMEVCSTYSKDPENRFETEAVEIARAFMEDGELTDSEPPSHAKHPQLTCPKSEEPAVRIGKRRNALVSAAREPPIKRSLLNEFDRIVENQEKSLQASKSTPDGTIKDRRLFMHRISLTPISCAPICSNKKKRGRMSASLGKEVRSLVEVGGPDAAPTLHRLSSITHVTSFPPRDLKSEHSVTTGTPTKVFVPPFKTKSRAQRNEQCAAGNVNLEENKQTQKSAVKLGSGDSENNINEGGIHPFSKNLITNLQNARDRQDTRIKMKQRQRVCPQPGSLYLAKTSTVPRLSLKMAVGGRAPSTCSPKQLYMYGVPEHCIKINSKTAESFRFHAQDYFGKEALWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWILWKLAAMEFSFPKEFANRCLTPERVLLQLKYRYDVEVDRSRRSAIKKITERDDTAAKTLVLCVSAIISSNTNVHETSSSTTSSVGSRSVAILELTDGWYAIRAQLDAPLSVLLKKGRLAVGQKIITHGAELVGSPDACTPLEAPESLLLKISANSTRPACWYAKLGFFPDPRPFSLPLSSLFSDGGHVGCVDVIIQRAYPIQWVEKTPSGLYIFRDERAEEKEAAKYAETQQKKLEALLAKIQAEFEEQEETAAKQCIPSRALTRQQIRALQDGAELYEAVKNAPDPGHLEGYFSEEQLRALSNHRRVLNDKKQAQIQSEFRRAVGSAEPGGPGLSRDVAAVWKLRVVTYEKKGKDSVILSVWCPSSDLCSLLTEGRRYRIYHLATSKSKSKSERANIQLTATKKTQYQQLPASDEILLQVYQPREPLHFSKLLDPDFHPPCSEVDLIGFVVSVVKKPGFAPLVYLSDECHNLLAVKFWTDINEDIVKPPTLIAASNLQWRPESASGIPTLFAGDVSTFSASPKEGHFQEAFSRAKNAIENTDVFCNDAEDKLQHILTAHDPKWCTPNKDCTSEPHSAPAGLGADSKFLLSFPNHEINYQSSLSLHSKGKSLSIPVSAQKTSKSCCKGEKDSDDQKTVRKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKHETPIKKAGWTSPQMAPLRRASETSVLESDSIPDEELALINTQALLSGSAG</mol_seq> | |
1151 </sequence> | |
1152 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">loxodonta_africana</property> | |
1153 </clade> | |
1154 <clade branch_length="0.210145"> | |
1155 <name>ENSPCAG00000000379</name> | |
1156 <taxonomy> | |
1157 <id>9813</id> | |
1158 <scientific_name>Procavia capensis</scientific_name> | |
1159 </taxonomy> | |
1160 <sequence> | |
1161 <accession source="Ensembl">ENSPCAP00000000440</accession> | |
1162 <name>BRCA2-201</name> | |
1163 <location>GeneScaffold_3650:343-54585</location> | |
1164 <mol_seq is_aligned="0">MPVGFKERPTFFEIFKARCSKADLGPISLNWFEELSSKAPLYQSEPAEESEYKVGSYEPNFFKTPQRKPCYNQLASTPVIFKEQGVTLPLYWSPLNLCRYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLQDTHVTPQREKSVVCGNLFHTPKLAKGRQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASETVFPYDSTPISKNYFSKHKKSQKENDWRVSSVPENENKNQGAVLSPESGEVPRGLFGDVNRCEGCGGSSVPCGPGEDTQETVADISKADSVSLCITKYKTGNTQKMKTGKTRETIPKIAKAGECEDVEKELEENRHSCAREMEASDSSLLDFHEPDEETAGSRSHTVSGGVVASSASPWSPLTPSGLSGTQMEKRPSLSMSCSHSHLEKDLIGPENDLMTSESSLPHISGVPETEKRWPEERVASKSHKGQKLAPQKTSVPAVQQVAAAASQSATEAVVGVRPLAGETCAVRSDDVTPSHFQEKPEASNSGWEIEAACSQKDGSLCPSSVGDGSCSATPKHASVALKNVSLIATLRKKTKKFIYSISDKKSSPEGNTWRNPDSGPTQHSQFEANCVFADADSGLLRFSVQKNHLQNEGEEPARPLTSSLGTILRESSSNKSSSTDKELSQGLYCKEARVNSEEVQSSGSTETHGQSCLQGHHGDKFPTTQGASDVKEEAWAVSVHPVTQHSEAEDSSVCLDSPRSSPCGRGGTASACPSPPDPRGTMSGRLMIAREREPCEMSEELSHKGCVTTFELIKNIPPEKNQEMCALNENCREGEWSLTQDYVTTASPSVKVWLGQNTDSTVVHANQEDTAFISKVTVSPNLEEFFQENEENSAPQVMNERNMAALEGMEELPEEHFRCVREPILKTTTRVMCSDRGYKQAAHVLMTEVCDSSAAICGLTEENRHGEEQRLTGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEHGIQKSKVLFRDIEDQYPRSLACAEIVGVSLLDSQQMLSRLDTLASKTPNPTSGEVWSKAFVSDSGSSHTAPQTLSLKQDFNSSRKLTPSEKAEITELSTILEESGSQFEFTQFRKRSMQNTLERSENQLTVLHDLSEDWKDVNLDLTTPGPSASQTGDSQRWVSTAATRQTAPNHVKQRASGCPEHKEKFVGFCSAGGTQVHGSSTTLQGALRLFSDTESLSEDASTGVASGRFSLSPSASVVSVSEIESSNERSLNKKHDKCQLTLPNSPDTTAGMSVKGNPERGKRSREDQCAGPHGNTRKLSETDGSDSAEKAPVCVCEGGTGLLWDEPSVGLRASSQSTMAGNGDITEGLSDLTCLEVVKPEETFHVDTSEKEEPTCNKMEQSGKDLDLCDLPVHTASRKAISISKESFSKVVNLFGTKYTEENSINLSDSVNSKLLSGISKNKKDCLRYKERNTVQNKVWKEKNLTDTENKLTVHPQAKHEMGKTGEPPMLGFHTASGKKVTVTKASLDKVRNLFDENKQGSTSEISNFYHRGTKRLQERGEHEEGLAVACEAVGTTPVPESGEVEDSLGDSDRNCVSNETLGFSRDCLCSHTENLRASNDSCVNDEVHENTERETAECPVTCDQPSDRHQALEFYTGHGGRIGGCQTSLLEAGKWLREGELGDERGKRNAADCVGNPSRGGSSGSITTENGNKNLSEKQDLSYLSNSCSYRSGFCHLDELHHKSWHLSKIKKDNSGIEPLVKDAQDRKSSSICEVTSPVGNADTHPPTIKEDTCVQKCVADTSLCRNNTATELTMSDSNSFAVGPPAFSVASGRVVSVSPETMNQVSRLFADTSSKVVTHTDCKSDTYQAKAVGGCHTALGDSEGNIFHNTLDGEGCVSPSCKALGDIHSEQVLPHTQRMSELDQVSKRPSCQVSLKTSDVCKSYTEKLPKSISTNTCGIFSTAGGKSVQVSDAALRKTRQVFSEMEDSAQQLVYTESCHSNKGHSNKVTKESKAVIHTKDKLPSPLAGFSSRAVNSSASSGFSTASGKRVLISENALQKVKGMLEEFDVIMADCSYDSPTSEDVSKILHCNDERVPKHCVSSKVQTCYRGFELSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSIKRSLLSEFDRAVENQEKPLQAAKSTPDXXXXXXXXXXXXXXXXXXXXXXXXTTEKRQEIQNPNLTAPGREFLPKSHCFERLALEKPSSSFSISRQPQCQVPAPSTGKASHLVTTGKPTKVFVPPLKTKSRFQRSERCATRNVNSEENKHTPRSVVKLGSGDSDNTVSEGRCHPLSKSSSSQAAAVTVTGAGDEPSDLIAGLQSARGLQETRIKGKQQQHVCPQPGSLYLAKTSGLPRLSLRTAVGGRAPAASSREQLYVHGVPEHCVKVNSRNAESFQFRAQDYFGKEASWAGKGVQLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWIIWKLAAMEFCFPEKFAYRCLSPERVLLQLKYRYDIEIDRSSRSALKKIMERDDAAAKTLVLCVSAIVSSSTKAHEMPSGNCSRVDSQPTAILELTDGWYAVRAQLDGPLSALVKAGRLTVGQKIITHGAELVGSQDACTPLEAPDCLMLKLSANSTRTARWHAKLGFFRDPRPFSLPLSSLFGDGGGVGCVDVVVQRAYPLQWAEKTPSGLYVFRDERGEEKAAARHEESQREKLEALLARVQAEFEEQEENAAKQCTPSRALTRQQVCALRDGAELYKAVKDAPDPGCLEDYFSDEQLRALRDHRQLLHEKKQAQVQLEFQKAVESAERGEQGLSRAVSAVWRLRLVSYKSRERGSVLLSVWRPSADVSSLLAEGRRYRICHLAASESKRTSGSTRVQLTATRRTWYQQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAPLVYLVDETHRLLVVKFWTDLNEGIIKPLALIAASNLQWRPEPNPGTEPGIPVLFAGDVAVFSGSPKEGHFQEAFNRMRSAIENTDVFCSDAENKLMHVLNTHGPSWSPPNEDWTSESCCAQAVLGAHSRFPLSLTSHEIKYWNYSLCPKGKPLSTPVSAQKTWRSCRGEEGGDDRRAIRKRRALDLLGRLPAPPPVSPACTFVSPAAQRAFQPPRSRAARHEPPGKEQEMTLLKKEASLVESESIADEELALINTALQGCAGQCPGVPVGDPAGMAPPPSPGPLGPQRAAGPAAGGQEQPQSSTG</mol_seq> | |
1165 </sequence> | |
1166 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">procavia_capensis</property> | |
1167 </clade> | |
1168 </clade> | |
1169 <clade branch_length="0.202287"> | |
1170 <name>ENSETEG00000003989</name> | |
1171 <taxonomy> | |
1172 <id>9371</id> | |
1173 <scientific_name>Echinops telfairi</scientific_name> | |
1174 </taxonomy> | |
1175 <sequence> | |
1176 <accession source="Ensembl">ENSETEP00000003277</accession> | |
1177 <name>BRCA2-201</name> | |
1178 <location>GeneScaffold_4230:2259-131183</location> | |
1179 <mol_seq is_aligned="0">LVGTKERPTFFEIFKARCSKADLGPISLNWFEELSLEAPPYRSEPAEESEYKVSSYEPNHFKTPQRKPYDPLASTPVIFKDQGIMPWLYQSPLKLYEFTIKETANSKQRSRLSKRARMDPAKDATSPPPNPCLSGSPLLRAAHVTPQRAKSAVCGNLFHTPKLLKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIAREQEVSELVFPNDATVASNDCFSNHNESLKKNDWLIPSGSDAENKNQREVISYEFGETLGNLFGDVHSHQDHSGRAVSNVIDEEVQERVADISEEDSFSLCVHKYKTGKLQKLKTRKTREKVLNKTKAGDREEAEPQLQGRKHLLSFGMEPSDSDPCDLAGLAQEPTGGTSEARSQELRASPALEWSQLMLSGLNGTQMTKMLFLPDPSFDQNDLGKDLIGTQKGCVTLVTTENSPPHLSSLRNTEAVLSEDPVLKESNEEKCVESNQDFILPAKPAVSGTSPITSPLQSTKKLVCKIRESPKETSGVDSSGYMTDPSFKEKPEASAGGLEADCHCSQREGLFCASSAANRSCPTSFRPASATLKGAGLISTLKQKTRKFVYSVSDETSYPEEQIQRDEDPEPPHCPAQVGVHAAPGAHSDSLHSPVKRSNLQSRPEEPTLSSCVGPILRKSSNHESSLNKIISQDLSDKEIELNTEELESFITTESDSLSCLQESYCEEDPKNDRRISDVREMVLAASHRPAIECGSVHLHSQESFLHDHNTSTLILTPSPKEPVSNPAMISRKADNIFEATFILTKNILVGKNQEISILNDNSQIAQLSPPEKYLKVTSPSLKVQFDQNTNGMAIPKDQEEITFTSEVTVCSNSEELFPENKDNFVFQTTSEKKNMAVLEDAKEHHETSVSCVKEPAPKHPTVVAYSDMDAKQAVQVLAPQDSNSSNISLNLSEEARKSKKQYLKMTLSQDLKTNLSLELARKSSRNDDVDSCVGLSCPISNCDFGGGFRTASNKEIKLSEHHIKKSKALFKDIEEQYPKSLACVEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKVACLLKNDCNKSTSGYLNHKVEFTGFCSALGTRINVSSEALQSVRSLFSAIEDTSEDTSVEGDPQSFSPGKHTSVPLSKRTYLNNDENVNMKCHIILQNNMEITTGIFIEGNTRDWKKNIENEEKCTDARRNTYSSGKSDSDSSKANTPGIHKDENGSPSNVGQHNMYLKLSGQLIKEGNNEKEDLSDLTCLEVVKTGEIVCVDTQTKHQSTNTKMRQNVKDFDMCNVPFQTASGKNIRVSKESLKKVANLFKTEESNTFSDLFDSELPSGINTDKSDSENRKMVKNNIQKGSNPIGIENKLLVLHQQPKCGIEKTREPAMLGFHTASGKKVKIAKESLDKVKCLFDAEKQDDDTSKIFSFHSQGTKTLKETREYTEGLQLETVEVTTLPKSEEKNLLHDHERNFISNETTGLLNEPFNRHTKSLKTSNSISLKVEVHQNLEKETAKSPTMCAASENPAFICTGRGRKISVSQASLFEAKKWLREGESEDQPVDISTADWVGNPPYGSSSNPVITESDKKIYLSNNSYSSDFCHSNEVRNKSGSLSKIDCSGIEPVMKNIRNRECTTSISEVTATAKKARTPPQTVNENVCVQKLRTDAPCTSENAAIGFAMSGSSNFEVGPPAFSTASGKRVSISRKAIERAREILVDNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSAAAGFSTASAMQVLISESALYKVKGMLEEFDLITAEYNPQSPPFISAASNILPLPSVENIPKNTNSKEVRKTCKTEFQLLNIERGSSESPLETKASLVEKSRPLGKEQTLLRQVKMKIDNAPTFSNIPMKKPVEVTSACSKDPEGYFETEAVEIAKAFMEDDELTDLELPSHAKHSQFTCTEPKETVVLNSRTGKRRNTLVSAGEPPTKRSLLNEFDRIAEKQEKSRQASKSTPDXXXXXXXXXXXXXXXXXXXXXXXXTTKEQPEIRTPSFTAPGQQFLPRSHVLGHSALEKPSSSVSVSGEPLHRAPVSGRDGARAAVSAGRPVKVFVPPFKTKAHFQKKEQCAAGNVDVDENEHPQKNLAVPGAGASMSGGGIHPLDQKDSSQAAAVTFSTHEGEPLDVLASLQIARDAQEARIRMKQQQRVCPQPGSLYLAKTSSVPRVSLRAAVEGRAPAACSPEQLYVCGVPTHCAQISSRNAAAFRFRAQDYFGKEAWAGKGIQLADGGWLIPSNSGHAGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHADARGRAVLELTDGWYALRAQLDPPLSALLKTGRLAVGHKIITHGAELVGAQDACPPLEAPASLLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRCVPSRALTRQQVHSLQDGAELYEAVRTTPDPGHLEGHLSDEQRRALSAHRQLLSNKRQAQVQLEFQRAVESVEAEVQDLSRDVTTMWKLRVTNYQKKEKDSVVLSVWRPSSELFSMLTEGTRCRIFHLTVAAAKRKAGKGTVQLTATKKTQYQPLPASEEILSQVYQPREPLDFHRLLDPNFQPPCSEVDLMGFVVSVVKTTGLAPMVYVSDEHHNLLAIKFWVDLNEDTIKPPILIAASNLQWRPESKLRIPTLFAGEFSTFSANPKESHFQEASHRMQAAVEDASAWCGEAKQKLLLLLEARGPEWSTPSKGXXXXXXXXXXXXXXXXXXXLPCAHGDCPNFLSLCSKETSLPMPVSAQKTATSCGGVEDGGSDPKTARKRRALDFLSRLPAPPPVSPVCTSVSRAAQKAFRPPRRCGTAHGARLGTRASASHQKTTPLGKAKDTLLVESDSIADEELALINTQALLCGPAGNPLVCVSQSARTTPLWPEASPGLQQPGPMPELPGNASQRGTRQEPHLQETSGTKFME</mol_seq> | |
1180 </sequence> | |
1181 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">echinops_telfairi</property> | |
1182 </clade> | |
1183 </clade> | |
1184 </clade> | |
1185 </clade> | |
1186 </clade> | |
1187 <clade branch_length="0.088637"> | |
1188 <confidence type="bootstrap">61</confidence> | |
1189 <taxonomy> | |
1190 <id>32561</id> | |
1191 <scientific_name>Sauria</scientific_name> | |
1192 </taxonomy> | |
1193 <clade branch_length="0.039526"> | |
1194 <confidence type="bootstrap">61</confidence> | |
1195 <taxonomy> | |
1196 <id>1329799</id> | |
1197 <scientific_name>Archelosauria</scientific_name> | |
1198 </taxonomy> | |
1199 <clade branch_length="0.197004"> | |
1200 <name>ENSPSIG00000011574</name> | |
1201 <taxonomy> | |
1202 <id>13735</id> | |
1203 <scientific_name>Pelodiscus sinensis</scientific_name> | |
1204 </taxonomy> | |
1205 <sequence> | |
1206 <accession source="Ensembl">ENSPSIP00000012858</accession> | |
1207 <name>BRCA2-201</name> | |
1208 <location>JH209329.1:1531099-1613422</location> | |
1209 <mol_seq is_aligned="0">MENKMADKPVARPTFFEIFKARCSESDLGPISLNWFEELSTEALPYESETSERPEYRAVCLEQSASKTPRGKPFTCSQLASTPVIFKEQSITLPLLSSPIKELGQKKTETGKDSLVNKDHRSSPHFMKTKLDQISPLNTSLSISSAALRGIYRTPQRNNIPVARGSLFCTPKLLEVKTPTCISEGLGAEVDPDMSWSSSLATPPTLSATVIIARGNDSISGAKQHDERIAMVLHSFFSSHGKRPEKNDVNVLSIPEIVNINAGLDGKDHELEKILDGSFGEMNSLENRSGRNQITQNSLEDGERNEMRIDMPDAGEHVLSVCHTSGEHLQDVTMTNWTKKTHFDKMATILLQETNEIRGNFKDASSVCERELDSPRCEIFTTNMSNNRIPKLLENRKFTKEDMPSTFTSEWSQLNLSGLDVTQLEKNSTSDKYSPSSFCNKKRSENKLHANLSTFETSLLNTSSLIKAEKLLNINWSEHMEDETKNYEKHSTSETSIMHSVDLSVQDPSLVKVCAAEKVSEVHFLDCSSFLMENTNFTGYTEVCTSCFHKELKELSKSSITDVTSHPVLCNDSIPSNPDGTKWSTNNESTPVRSCLKNTSLLSSLKKRSKRFIYTINNASPRQEEKVKKEIKAGPSIHSASSRLEFESCPFKSPDMVSNDDQDLLVSSAERKSLKSNSEESFMLLSKYATRADRIDNSPNSSLKNKMIHLDILKSNRREHQPASSLDCSETSNTLKECLVVSSNSNNVLSVEHKVIATACLRATKHSEMDFVRTEHVVQWPKKDEMEMYGNVNPHNDTVILQTFKNQLGEPSSDNEQLVEIEQEQVSMKNRYFNDTSINCDIHKHNSVCCNRTKSEDENDATGLLPTDEWKTVTLPPLIIQSNKNSSTTTLIRESKKDTVQFSKVIVADQETESIENGDNNLQTPSNNNMVTIESSEKLFDHNNCGSLQAVISDKSTLPQLALKIGPEQIVSDFVTKAPEPNVEDKDFVKKVITFPSKRVTSDKYLYSKNHLCLDIKSKENPEDKEKWSGDTNFNGQCLNKCFGGFQTASNKQIKVSEKSITKGKMLFKDMEDECLKDFSGEGIKNISNQITKKNINIVNNKLDTNYSHGLDSQASLIESKNAQSIVPESTDSSLQSLHRNQPHQLNQTLTASQEAEITELSNILEETNSQFEFTQFRKQSNMVQNNSSQLSGCVDKNETTNLKDISAMWQDTDLDYISETEAQRVNDKSSSKHTDINEESTEMGNVNEEREIFQKNNCVEFTSTNLCRNANKIPLVSSFSVSTQDNFSNFAGFSSAGGKKINISNEALIRAAKLFSNLDAAAADDDDMFKPTEINSRSHYSDRYKTSRRDVSRCVAEGDSYCGESVKDANIEYQNTLKNNEENINTFMKIYGENQGENTTNISENDRVSSSTKISNLGVIKYSVYKMENGLSSSENNNPSLNISKKLHESDTQSQYSLQEGLSDLTCLAEVSKTEEILTLNISDDPSKSEQKIKNVDFRTASSSNRSVSQAPLDKFHLFETCTEKELNNISSNSNSQMTHSINKKERNATSRKRNINVNQNKSRIGSGHQQISIQQDTDFERKNIEENNGFHTANGKKIIITDESLSKAKQFFAEENVCPENMDNIGNFEDSEFHPCNKDFIKDCEEFAENTPNYDQEMLTLTVGDQGVKFVGPGSTSALRKSEVVISQKRDPKPELISKTTFGFNTASGKRVLVSENAFQKVKQVFNNSKYHFADRLSSRQDPVIALKSSINYAGANKATDTVCLKPKIQDTHNEELDLTNSYPVEIKALQNICNIEIPVCVPRSEKDEHLTLINSFTFAEDTQLFKKEHHSLTRMEIEAVSCNTPTKTKLDVFHLKCSQSSEEYLETEAVESAKAFMEDKFTNSGIENDTKKSLFICRKIDKNCPLNIRTGKRHMEERASLGEPPIKRQLLPEFDRTENPHKSLKASKSTPDGMIKDRRKFMYHIPLKPETCVPFSATKERQEIKNPNITVLDQDFKGYKPKSDVFQHHLLRQSLSGSSGFFTPFKKISTEESEKRKNLPLLSKTAKTFVPPFKVKSAISTHQHHVSKRLDSLINTTMNRDKELKDITMQQSTSETEVQSQEKDYTKQVAPCNLRNNVDGDSDLMEMIANLHYVRNLQEMRIRKKQRQNIHPQPGNLYLMKTSAAKRISLKAAVEEKTPSTYSMEQLYMYGVSKDCIKVNSINAESFQFLILDFFSKEYLVAERGIQLADGGWLIPTDKGMAGKEEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPQEFANRCLTPERVLFQLKYRYDLEIDKSQRSAIKKIVERDDTPAKTLILCVSKIILLNANMPDVCSNKTIVENKKEAAIIEVTDGWYCIRALLDPPLQALLHGRRLTVGQKIIVHGAELVGSQDACTPLEIPDSLMLKISANSTRRARWHAKLGFHQDPRPFPLPLSSLFGEGGTVGCIDIVIQRTYPIQWVEKMPTGSYVFRNGRAEEREAAKHAENRQKHLEALFSQIQMEFEQHEDKPHKRALRSHTLTREQIRILEDGAELYEVIQNASDPSYVEGYLSEEQLKALNTHRQILNDKKQSEIQAEFKKAIESAEREERGCSKRDVSTVWKLRVIDYRKRETDKAIILSIWRPLSDICSLLKEGGRYRIYQLTASRSKGKPDAVNCTLTATKKTQYLQLQASQEVLLEIYIPRKALQFSMLLDPSFRPSCAEVDLVGFIISVSKKTGFTTLVYLSDEDHNLVAIKFWTDLKQLAIEDIINPFTLISASNLQWRSEFKSDIPTLFAGDLSIFSASPKDSYLQERLNKLKNTTENLSCFCSDAEHKLMKFLQKNSPQQYNLPKECGLDPLSPSWKSGLDTGNKPLISSPSSEIKCQSSLSTSKHDLKLVLRSSAKMTPHISYSKESPKNCKKRRKALDLLSQIPSPPPVTPINSFVSPSLKKAFQPPRSSGVQYDASLKRTNHNSDHINSFKGVNETDSLPNNDLVADEELAMINTQVLLYNFQEGKKTDCVGESTNPSDHLLLKNNCLMSLMETKTSQNSTDGAAALEKDTRETEGSLPVQKKLQRQRKRKCY</mol_seq> | |
1210 </sequence> | |
1211 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pelodiscus_sinensis</property> | |
1212 </clade> | |
1213 <clade branch_length="0.300747"> | |
1214 <confidence type="bootstrap">100</confidence> | |
1215 <taxonomy> | |
1216 <id>8825</id> | |
1217 <scientific_name>Neognathae</scientific_name> | |
1218 </taxonomy> | |
1219 <clade branch_length="0.028469"> | |
1220 <confidence type="bootstrap">100</confidence> | |
1221 <taxonomy> | |
1222 <id>1549675</id> | |
1223 <scientific_name>Galloanserae</scientific_name> | |
1224 </taxonomy> | |
1225 <clade branch_length="0.115288"> | |
1226 <name>ENSAPLG00000007774</name> | |
1227 <taxonomy> | |
1228 <id>8839</id> | |
1229 <scientific_name>Anas platyrhynchos</scientific_name> | |
1230 </taxonomy> | |
1231 <sequence> | |
1232 <accession source="Ensembl">ENSAPLP00000007411</accession> | |
1233 <name>BRCA2-201</name> | |
1234 <location>KB742680.1:477155-513214</location> | |
1235 <mol_seq is_aligned="0">MACRSGERPTFFEIFKTRCSDSADLGPISLNWFEELSSEAPPYEPKLLELDAPIDQTSFKTPKAKPFTYSQLTSTPPIFKEQNTIMPPFSSPGIELDQKKIGTSRENFTSPSIIGRKRDQENEMLASPLGTCHNFLAASPAILRNAFRTPQRSNIPGPYGSLFCTPKFLEVRTPKRISESLGAEVDPDMSWSSSLATPPTLGATVIIARETSSISGPKQQDERAEIVLHSFSSDHDECPGKNDSSLLSIPETVKLNGEDVTKEFESEMLDGFFGEMDSFENTLTVPAESSGTLLLLPHALDAIDKCETKRDEAQGEEDVPSEQPVRRKTGISQEVEMGNGAEKSHPIEMKDYLSQNADEDTGDSKDACLIGHEKELDLLRITGNMQDNGMEKSCENEKLVKDDVLSSSSQWSQLNLSGLDVTHLEMSTCSSPSIDLCTDKDLKEKTALMAKDDAVGTSLLNTLGLKNAQQLLNASLSDMHEEMQKTGNNPTAEVTPVRSVHLNPELVKGHAAEKVSKMSFINCNSFLIKSTNVMEYSVVYNSSFSKCVKATSKSVVTDVLSHPLVCSTSSPDNCSDLHFTSSENTLTKSGFKSLNMLSRLKNKSKRFIYTINNTLLYQEEKIQKEVTSELPADLMLPQLETDSHEFQGCHVAADGDPDSLLSAERQLNIKEDNLSTCVKKDLEDNSSFDSRLKQQELRNLGKDTREYQPATSLKCLEVSNHQKEDTTDSLNSERISNIKRKVLSASCLMARKRSRLFPEDCCLEKGEEDTSMSHNVNNGATVPQSLKRQPAQAFPSNNDCLLDVCHDITSVTNRDVNKTLSQINFDINRVSSDSCSKISADEKHATDPLALVEHRQVLAPVGMNCSGDDRIRLKQCGKKDVAAFSGDVADNQETRLVKSDESPEAAACNKVAVEIVEELLDCIDDNSLIEVISEEDKQVPPIYSHKEPNENLEHEGKSSGIVNVCRSNLSFGGFQTASNKQIKFSEDSIAKGKMLFKDIENECFEASYVERGRNFSNQVQKENVFSSNLESKLGSALSGSQTRRTQFTPHKVDLCKNFPRSLHSLQELNQTLTASQEAEIAEISSILEETGSQFEFTQFRRQSNMVQSVEKQDIVTVEMHGAANVENNSEPWKDTDPCSTFKSENQVRNDKYCSTWKDTDEECKMVEYEKENKVLFHKSSEEVTFSDRDESGVSDGESFPVPVQASVSNFVGFTSAGGKKINISKAALTRSAELFKDLDDNYLLKSSETNTGCGNSKGSRGMSSNWNSFRCLTKENKGVSNINSVGAISHAHSISHHSENVGTPEKENKENWTERLISDDERVDFSHANARHSAYGMRNSPTSIQEQNQNHKIPKQVLNPGDCQAEDSLQEDSLYVTCLGDATATAEHCDLSISDEMENLFPAEKGEDSRQKDEHLPQKFQTSDGAISVSGGPLDNSLHGLSVNCGERDVDVSENSDKQKTTGINIEGEDTTDESLFVNESRIKMGSYQHHQVPFEQEVDVEPSEVKGSFLTGFQTASGKKITIADGFLAKAEQFFSEEDVDLGKEHNDNFEDHIKNRKRSVNCVKGCDLRIDNVAQCDAEKLISEEPGIRFKQTRGSSPTKQAVILDSVKVDAFANIGEDSDRNLVAAYEKADVQHGKSELESLSEWESKALSRTCLSEDGKLFAEMDVECSAKKKDKSESTHGFPVQSAISLPSMKVSSNPVDNSMPCDVKNTLFVEDSSKSDQSVLKAYSSVSQSHCPQLNSDSKEFDVQHLNQPCSNTSCFADAALTAHQKQSEVGLPEGGTNLACLQETSLNFNDGNPKGGLKQTVFSTAKGKAVFVSESALARVRQMFQEDYGESVKHEIKTKSRTNQTEIPVNSSFVVPAECPNSTKFLDATKREGNSAASHFTDGNVNASEDSQQDANPFEDEISVPNSQVQGFGQNTALLGHVPVPNKQMKQSDSSTSNLGFFSTASGKPVQLSEESLKKARQLFSEMESSHSSGLQEFQVEGDVEKSEKLAEEVFPRKMQLEERENASTKMISGPAFGFSTASGKQVTVSENAYQKAKAILKESDDFLSNELCIIDQLHAIKESGHRTKSRTGNVISESKTDKSCDELDFKSIHPEEMKSSSSTHHLKMPEYVPHSKKNSQLALVKNSFKQEETGPVRKGLNLGMKTESEAVSCSATAKAEINDELFQTPKSHFKVGTVGNEKASVGDHLSDPGAKTNSAQSFCGKTSDKSFQNKTFGKRHFEEKNALGEPPIKRQLLLEFDKTKMPPRSLKASKSTPEGIFKDRRKFLYHVPLKPVTCQPFGASKERQEVRNPTLTLPDQDFKGFKSKPAIFQHCALRQSSNDASRLSTPHKASAQESEEKRNLNKSGKTAKTFVPPFKTKLTFSTSEQGSSKRCDSPISKNMTEEREINQIRIEKDTAETRDHPSCILHAADTDLENGNLVMNKMMANLRCARDLQEMRIKKKFRQNISSQPGSLYVIKTSARNRISLKTAVEEKSPSFYSTEELYRYGVSKHCVQVNSTNAESFQFLIKDFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVAFPHEFATRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKIISLNAVVSPSNNNMESKKGAAIIEVTDGWYGIRALLDPPIKAFLHRRRLTVGQKIIVHGAELVGSQNGCTPLEAPDSLMLKISANSTRCARWHAKLGFHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRAYPIQWMEKTSAGSYVFRNSRAEEREAARHAEDQQKKLEALFAKIQAEFEKHEGHQDSCHTDRGFRVLSCSDLLLTNYPLGAVYNVIRRQLSTRSFRLQGYLSEDQLKALNAHRQLMNDKKQTRIQEEFKKAVESAEKEKYGCSKRDVSTVWKLCVVDYRKQEKHKGVILSIWRPPLDVCSLLKEGSRYRIYQLSASQSKGRAESTNIQLTATKKTQYLQLSVSKKMLLQIFFPRKALKFTSLLDPSFQPPCAEVDLVGVVISVSKTGFATMVYLSDESYNLVAIKVWADLRHFAIEDIVVRSSFISASNLQWQSDFRSEIPMLVAGDLSVFSASPKETYLQEKFNELRSLVENVDSFCSDAESKLMNLLQRSQSLTPTLPKRCGSECFSPSCNSGLYAADKSLISSSKMEIKYLSPLSTSTPNMKLVPQGSAKTPSFDEDHPKNSKKRKAMDFLSCIPAPPPLTPICSTISPSLKKAFQPPRSLGLQRSKSGKETNPNVGFVTPSRKVREAVRVPVNDLVADEELAMINTQALINTLPEEKKTEGVNETSTIATNLSDDLSSKRSSRSTEEAKNSLKSSSEGAEALQEDDAATKELGGSLSTHRMLQRRKSRKCY</mol_seq> | |
1236 </sequence> | |
1237 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">anas_platyrhynchos</property> | |
1238 </clade> | |
1239 <clade branch_length="0.083504"> | |
1240 <confidence type="bootstrap">100</confidence> | |
1241 <taxonomy> | |
1242 <id>9005</id> | |
1243 <scientific_name>Phasianidae</scientific_name> | |
1244 </taxonomy> | |
1245 <clade branch_length="0.033173"> | |
1246 <name>ENSMGAG00000015077</name> | |
1247 <taxonomy> | |
1248 <id>9103</id> | |
1249 <scientific_name>Meleagris gallopavo</scientific_name> | |
1250 </taxonomy> | |
1251 <sequence> | |
1252 <accession source="Ensembl">ENSMGAP00000015990</accession> | |
1253 <name>BRCA2-201</name> | |
1254 <location>1:182034286-182069530</location> | |
1255 <mol_seq is_aligned="0">MAYKFGKRPTFFEVFKAHCSDSDLGPISLDWFEELSSEAPPYEPKLLGEPEGPIGWFDQTFKTPKAKSSTDSQLASTPLIFKEQITMPPFSSPGKELDQKKMETSRENLQSPNMAGRKTDQENQILASPHGICHNYTAASPAIFRNTCRTPQKSNIPGPYGSLFCTPKFLEIRTPKRICESLGAEVDPEMSWTSSLATPPTLGATVIIARENDSISGAKQQDERAEIVFHNFLSKNGEYTTKNDTSLLSIPETVKLNAKDDIKDLELEMLDGIFGEMNSFEDSFNLPAESSGTLLLLPRALDAIEKCEIKIDEAQGKDDVLSEQRMRRKTAISQEVKAANLSEKSCCVEVKDSVFQNTDEDIVDSKDSSLIGHEKELEYLRIAGNLQDNRTQKSSVNEKLMKDVLSSSNQWSQLNLSDLDVTHLETSMCSSPQSDLHREKGLEEKSELMTKDDVVETSLLNTGDLKNAQELSSASLSENCSDTEISKNIPMTEITPVKPLCASPKLVKGCAHEGVCKMNFLNCSSFLIESTNVMEYSVVYNSTFSTHLKATSKSVVTDVFSHPLICSAASPDNCSDLHLTNSENALRKSSFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPANPLLTRLESDLHEFKGCQVATGVNQDCLLSAKRQSNIKENNFNTPTTEIDAMDNSSDNSVNNRLKQQELSDSGKNAREYQPATSFKCLEASHTQSEDTTDCLKSGRISDIKHKVLTSAYLMARRCSRVFPEDCCLKKGKNDPYISPNMNSQTAVPQSPIGQPPQSFPSCSDCLSDIHHGTAFVANSKFSNTLSQIKFGMNRVGGNSCNKISADKRHATDQLSAEYREIVAPLEINCLENNSTGLKQRGKEDVAENQETFSMKNSENSQAAAWNNKSVEVAEEFLDCIDNSLNEVISEEDRQLAPVCFNTKPIENLEHKGKSSGDLHTCSSSLRFGGFQTASNKQIKFSESSIAKGKMLFKDIENECFEASSMERVRHFSNQVQKENIFSSDLESKKGSTSSGLQTRCTQYIPCKVDLCKNSLRNKLSVQEPTQSLTASQEAEIAELSNILEETGSQFEFTQFRKQSNMIQSHVQQFGATNVENASEAGEDTNFYSTFKSENHVINDEYCSKLKNENECKMVEYEKENTVVFHKNKKKITSSNLDRNKSGISNHESCLVPLQASFSNFVGFTSAGGKKINISKAALTRSAELFKDLDDDSFLFKSSETNTGCCNSDGHVSSNGNFIRCQTKEDEGGILCVPNIRSIGPISHHSEYVEDISTPCKESTENWTEILSDNENVDFSCTNARYSASGMRNNPSSFKKPHQNCKNSDQFLNREDSHVEGCLQEDTSYLMCLGDNTNSTEERGLSVSDEMGNLSPNQKEDKKQEDEHLLLNCQAADTDAVSISDSSLCSSLRDLNVQCGERDTDVSENSSKQKTNSVNVEGEDSTNKNPLVSESGIKIGSYQHHQVPSEQEMDVEKNEVKGTYLTGFHTASGKKITIADGFLAKAEQFFSENNVDLGKDDNDYFEDCLRKCNKSCVKDRGLYMDGVAQRDADVLNFKDKLISEEPGDQRKQAIEGSPIKQAINHDSIKVGAFINVDEECERNLAAPCANKESYVRPGKSESLPGHGSNSLSRTLLFEDRKLLAERDVQHSAEKRDNSESKPDFRLKCATSLHFTKVSSDLADIPVPGGIIKTVSAEDSCKSSQSLLLIHGSVPKSSSPYLNCGTKEIGLKRLNEPCSNTDCFTNTADNAHQEQPEVDLPEDGTNLTWLQETSLNAESQKSDLKQMFSTAKGKAVSVSESALSSIRQMFQTGCDEHVKSEIETKSGTNQAEIAGSSSFSIHAGGPGFATFLDPTKSEMNLAASPFINGNGHLIENNRQGANTSADADSVQDFQMQCFEQKSKPLGHLSVPNKQREQSGPSGNLGFFSTASGKPVQLSEASLKKARQLFSEMEGSHSPELQDALLLEDVEKSRNSDEIFPREMQLALPRGKENASTDKISSPALGFSTASGKQVTISESAYRKAKALLKEADDLSSELGVTRELREIKESGQHAKYLTSKVISESKTGKSCSKELDLRSIHPEEMKSFPSTHRVKITEYVSHNKRNSQSAPFKNSFEQEETRLFRKGELNLRMKTEAESDLCSATTKAEINIFQTPKGYLKTEAVESTKAFMEDDLSDSRVQVQSAQSFIGKMSDNFQNKPFGKRHLEEKDSLGEPPIKRQLLLEFEKMKIPPKSFKPLKSTPDGIFKDRRKFMYHVPLKPVTCQPFGTAKERQEVRNPTLTLPDQDSKGFKSVPAVFQHCALRQSSSGASGLFTPHKAMAKESEETRSLCKSGKAVKTFVPPFKTKLMLSTAEQGSSKRCHSPVTNSVTEERELNQIPVEQNSAEAQDHQSCIPHAVVTDVENDNLVKSNMMANLCCARDLQEMRIKKKYRQNISPQPGSLYVIKTSARNRISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPHKFANRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCISKILSLNAALSPGNSNNSTECEKAAAIIEVTDGWYGIRALLDPPLKAFLRRRRLTVGQKIIVHGAELTGSPNGCTPLEAPDSLMLKIAANSTRRARWYTKLGFHRNPGPFPLPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKQEERNCRRAPGSRIVTRQQIHNLQDGAELYEAIQNAPDPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIQEEFKKAVESAEQEKHGCSKRDVSTVWKLFVVDYRKQEKHKGVILSIWRPLLDVCSLLKEGGRYRIYQLSTSQSKGRSDSTNVQLSATKKTQYLQLSVSQKMLLQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRTGFPNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSEFRSEIPVLLAGDLSAFSASPKENHLQEKFSELRRMIENVDSFCSDAERKLMNLLQRNCSLTPILPKKCGLECFSPSCNSGLYAEDESSISSKIEMKHPSPLSASTPNTKLFPQGSAITPSSALSNENHPRNSKKRKAMDFLSCIPAPPSLTPVCSIISPSVKKAFRPPRSLGSQHSKLSKETNPNAGCVTPGRKLREAVQLSDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRASNLSGDTRATNLSGDLSSKNSSRSAKEANSLLKSSSEGADALQKDTEEREGLLSIRRGLQRHKSRKCY</mol_seq> | |
1256 </sequence> | |
1257 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">meleagris_gallopavo</property> | |
1258 </clade> | |
1259 <clade branch_length="0.03556"> | |
1260 <name>ENSGALG00000017073</name> | |
1261 <taxonomy> | |
1262 <id>9031</id> | |
1263 <scientific_name>Gallus gallus</scientific_name> | |
1264 </taxonomy> | |
1265 <sequence> | |
1266 <accession source="Ensembl">ENSGALP00000027524</accession> | |
1267 <name>BRCA2-201</name> | |
1268 <location>1:173820724-173857456</location> | |
1269 <mol_seq is_aligned="0">MAYKSGKRPTFFEVFKAHCSDSDLGPVSLDWFEELSSEAPPYEPKLLGEPEGPIGWFDQTFKTPKAKSSTDSQLASTPLIFKEQNTMPPFSSPGKELDQKKMETSRENLLSPSMAGRKTDQENQILASPHGICHNYTAASPAIVRNPCRTPQGSNIPGPYGSLFCTPKFLEIPTPKRISESLGAEVDPEMSWTSSLATPPTLGVTVIIARENDSISGAKQQDERAEIVLHNFLSEDDGYTAKNDTSLLSIPETVKLNARDDIKDLESEVLDGLFGETNSFEDSFNLPAESSGILLSPRALDAIEKCEIKIDEAQEKSDVLSEQHRRRKSTISQEVKAANWTEKSCCVEVKDSIIQNTNEDIMDSKDNCLLGREKELEYLRIAGNLQDNRTQKSSVNEKLVKDVLSSSSQWSQLNLSGLDVTHLEMSICSSPQSDSCREKGLEEKSVLMTKDDAVETSLLNTSGLRNAQELSSASLSENGSDTKISKNNPMSEITPVKPVCASPKLVKGYAHEEVSGMSFLNCSSFLIESTNVMEYSVVYNSTFSTHLKATSQSVVTDVLSHPLICSAASPDNCSDLHLRNSEKTLRKSNFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPDNPVLTHLESDLHEFKDCQVATDGNQDCLLSAERQSNIKENNLNTLTIKVDIMDNSSDNSVNNRLKQELSESGKNAREYQPATSFKCLKASHTESEDTTDCLNSGRISNIKHKVLTSAYLMARRHSRLFPEDCCLRKGKNDTYTVSNVNSRAAVPRSPKGQPPQSSPSCSDCLIDMRHGTAFVTNSKFNNTLSHIKFGMNRVSSNSCNKISADKRRASDQLSVAECREIVAPLGINCLENNSTSLKQRGKEDVDENQETLSIKSSENPQAAAWNNESIEVAEEFLDCIDNSLNEVVSEEDRQVAPVYFNTKPIESLEHKGKSSGDLNACSSSLSFGGFQTASNKQIKFSESSIAKGKMLFKDIENEFFEASSMERVRNFSNRVQKENIFSSDLESKTGSTSSGLQTRCMQYIPRKVDLCKNSPRNQLSVQEPNQSLTASQEAEIAELSNILEETGSQFEFTQFRKQSNMIQSHIQQFGATNVENASEAGEDTNFYSTLKSENHVINDEYCSKLKNENECKMVEYEKEDTVVFHKNKRKVTFTNLDRNESRISSHESCPVPLRDSFSNFVGFTSAGGKKINICKAALTRSAELFKDLDDDNFLFKSSGTNTRCCNSDGHVSSNWNFLRCQTKEDEGGILCVPNIKSVGPISHHSEKKYAENISSPCKENTENWTEILSDNVDFSCTNGGYSASGMRNSPSSFKKPHQNCKNSDQFLNQGNSEVEGCLQEDTSYLICLGDNITSAEEHDLNVSDEMENLSPNQKEDRKQEDEHLLLNRQAADTDAVSISDSSFRSSLRDLNVQCGERDTDVSEKSSKQKTNSVSVEGEDSTYKNLFVSESEIKIGSNQRHQVPSEQEMDVDKNKVKGTYLTGFCTASGKKITIADGFLAKAEEFFSENNVDLGKDDNDCFEDCLRKCNKSYVKDRDLCMDSTAHCDADVLNFKDKLIPQEPGDRLKQTIEESPIIQAVNHDSIKVGAFINVDEDCERNLAAPCANKEAYVRPGKSEVESLPVHGNNSLSRTLLLEDRKQFAERDVEYSATKRDNSESKPDSSLKCATSLHLTKVSSHLADNSVPGGIIQTVSAEDSCKSNQSFLLPRGSVPRSTSPYLNCGNKEIDLKRLNEPCSNTDSFTNTVDNAHQEQSEFDLPEDETNLTCLQETSLNAESQKSDLKQVFSTAKGKAVSVSESALASIRQMFQTDCDASVKSEIETKSGTNQTAIAGSSSFSIHAGGPGFATFLDTRKSEMNVAAPHFINGNGNLIENNHQGANMFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSGPSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHSSGLQDAHLLEDVEKSTNHGEVFPREMQLLLPRGKENASTDKISSPALGFSTASGKQVTISESAYQKAKAILKEADGFLSSELGVTNELCEIKESGQHAEYLTGKVISESKTEKSCSEELDLKSIHPEKMKSLPSTHRVKITEYVPHSKRNSQSAPFKNSFEQEETRFFRKGELNLGIKAESESDLCSATSKAEINIFQTPKDYLKTEAVESAKAFMEDDLSDSGVQVKSAQSFGKMSDNFQNKPFGKRHLDEKDSHGEPPIKRQLLLEFEKMKIPPKSVKPLKSTPDGIFKDRRKFMYHVPLKPVTCRPLGTTKERQEVRNPTLTLPDQDLKGFKSIPAVFQHCALRQSSSGASGLFTPHKAVAKDSEETRSLCKSGKAVKTFVPPFKTKLTLSTGEQGGSKRCHSPIRNSVMEERELNQIPVEQNSAEARDHQSCILHAAVTDIENDNLVTSNMMANLHCARDLQEMRIKKKYRQNISPQPGSLYVTKTSARNRISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVCFPHKFANRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKVLSLNTAVSPSNSNNNTEGEKAAAIIEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELIGSPNGCTPLEAPDSLMLKIAANSTRCARWYTKLGFHRDPRPFPLPLSSLYSEGGTVGCIDVVVQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKHEERNCRRAPRSRIVTRQQIHNLQDGAELYEAIQNAADPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIREEFKKAVESAEQEKHGFSKRDVSTVWKLFVIDYRKQEKHRGVILSIWRPLLDVCSLLKEGSRYRICQLSTSQSKGRSDSTNVQLSATKKTRYLQLSVSQKMLQQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRTGFSNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSEFRSEIPVLLAGDLSAFSASPKENHLQEKFNELRRMIENVDSFCSDAESKLMNLLQRNCSLTPILPKRCGLECSSPSCNSGLYAEDRSSISSKIETKHPSPLSASTPNTKLFPQGSAITPSSAVSSENHPRNSKKRKAVDFLSCIPAPPPLTPLCSIISPSLKKAFQPPRRLGSQHSKLSKETNPNAGCVTPSRRLREAVQLPDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRATNLSGDTRATNLSRDMRAPNLSGDLSSKNSSRSAKEANSSLKSSSEGADALQKDTEEPEGSLSIRRVLQRRKSRKCY</mol_seq> | |
1270 </sequence> | |
1271 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gallus_gallus</property> | |
1272 </clade> | |
1273 </clade> | |
1274 </clade> | |
1275 <clade branch_length="0.09653"> | |
1276 <confidence type="bootstrap">100</confidence> | |
1277 <taxonomy> | |
1278 <id>9126</id> | |
1279 <scientific_name>Passeriformes</scientific_name> | |
1280 </taxonomy> | |
1281 <clade branch_length="0.042194"> | |
1282 <name>ENSFALG00000008451</name> | |
1283 <taxonomy> | |
1284 <id>59894</id> | |
1285 <scientific_name>Ficedula albicollis</scientific_name> | |
1286 </taxonomy> | |
1287 <sequence> | |
1288 <accession source="Ensembl">ENSFALP00000008821</accession> | |
1289 <name>BRCA2-201</name> | |
1290 <location>JH603207.1:3296246-3332661</location> | |
1291 <mol_seq is_aligned="0">MACKPGERPTFFEIFKAHCNESDLGPISLNWFEELSAEAPPYEPKSFGEVDGPSGWLDQTAFKTPRTKPSTYSQLASTPLLFKEQNAILPPSPEKEPDQKKIGANRENLISPSNRRRKLDQENEILASPPGTFHNCLAASPAILRNTYRTPQRNNIPGPYGSLFCTPKLSEVRTPKCISESLGAEVDPDMSWSSSLATPPTLGETVIIARENDSISEAKRQDGRADTILHNYFSKHDKCPGISDASMLSVPETVKLNAEDDIKDLESEVLDGLLGEMDSSEDTFSMPAESSRTLLLMPHALDAVEKYEINPDKAQEKGDVPSQQPNGRKNGISQEVKTNSWTENSLCTQVNSSLLQNTHEDTGDGKDGSLIGHEKELESLRKAGDVHDCRPHKSFENERPVKEGVQSPPSQWSQLNSDLDGTHREMSVCSSLPSDLRREENLEEKSLLMAKDDVAETSLLNSSGLIKAQKLFNVDLSEKSREMKDTESNPTSEITPVKSVSLGVQDPELAKECAAEVSKMSFSNCNSFLIEHANVTEYSLVYGGNFSKHLKAASKSVITDVLPHPLVCSATSPDNCDDLHLINSENTPTKSGFKNLKMLPSLRKRSKKFIYRINNTLLYQEEKIQKEVTSESPIHSVLPHLESDSYEFRGCLVASDVKQDHFLPAERKHLESNTSAKNFSTSTSKIDIMDNSSGNSFSDTLEQDLRDLGENAREDQPATSIKCLEVSNTLKEGITNSLNSEIISNIKRKVLTSACLMARKRSKLLPETTCALEKGKEDNMSAKVNDGAAAPQSLEELGSSQRDREVLVDIQGDSTSVTNSSSHNTLCQINLGITGVSSGCCNKLSPHKRHATDQRSGVDCREVHRPLGINCSEYDSTGLKQGEKTDDPANNEDPKPTENSKSPQAAAFSNVAVDISKELLDCIDNNSLNEVISAEDKQIAPMCSSKKPNKNLKCKRESSVNLNACSLNLGFSGFQTASNKQIKFSEASIAKGRLLFKDIENECFEASSMERVSNFPHKVKKENILFSGSKNKLGSNSSDSSDSQASFLEPRHAEFIPHKVGLCKSFPGTPQALQEANQTLTASQEAEIAELSSILEETGSQFEFTQFRKQNNTTQSRSLQKLGTVETRRIKNVENISETRKDMGVCSTLKSENQVKNDKFCTQEEDTNEDSELVENEKENAVFFHKNDKKVTFTNLDINESRRSDESFPIPKQDSFSNFIGFTSAGGKKINISKAALSRSAELFRDLDDDNYLFKSSETGTRCHNSNGSMSSNSNSSRCLTKESKEKTVSDFKSVSHTGSVSYHAQNKNEENTSTGFKEDMENKTKISVNNIENVSFGSISILNCLLSTKNRKQNFKTSKQILNPGDDEGNLQDHSLDVTCLEDAITTAEEHSLNTSCEMENHSPKQKGEDRKEDECLSPKFQTPAAGDISIPDAILDHSLPLFSVQCGEGDVHVLENFDKEKINCKNIEDTAHGKDLLVNESRIEIGSYHHCQIPLEQEVNVGENKVEGSYLTGFHTASGKKIAIADGFLAKAEQFFADVDVGMEHDNFENLIKKRKFGKNCVKDCDLGIESIAQCDSEKPNFNEKLVPEELGDQFNQAIERSPIKHAVILDPGEVDTFVDLGEACEGGLVPSHAHKKADVKPGKSALESHIGQKSDALSRTHLSEDRNFLAEKKVPYSPRKRDDSENTDDFPVHSAASLHLMKVPHDLEDNCVPGDTKNALFVKESNNKADQSLLLDSKSSCSYMNGDSKEFDLEHLNEPAADKNSFTGTIANACQNQSLMSLPEEETNFSRLKETTLKVEKQRGHLKQTVFSTAKGRAVSVSESALARVRQIFQDCSEAVKYEIEPNSKTNQTEIARNSSVVLHTEYPNSAELFNARTSEEVNSAASQFIKVNASADEDSHQEGNTSADAKSVSNSQKQSFEQNIKLLGHFVPNKQIKPSDASTSNFGFFNTASGKPVQLSEESLRKARQLFSEMEGNHSQHVQEAFLVEEDVEKSKMHTEVLPRRMQVVSSKGVENTSPELISDSAFGFSTASGKQVKVSKDAYQKAKAILEESDCILDSGLCTTDHLSSIKDSGQHVKSLTDKVISEFKTEKGCNQNSDFKSTCPQEIKYFPSTYYVKMPEHTPYKKENKQLTSFENNLQQEETESFGKGQLNLGSKPESEAISCSAAAKAEIDTNLLQSPKNYLEVEAAESARAFMEDSFSSSGVQINAAQTFSGRLDKNFQNKSFGKRRFEENNSLGEPPIKRQLLLEFNRTKDSPRSLKASKSTPDGIFKDRRKFMYHVPLKPITCQPFGSTKERQEVKNPTLTLPDQDFRGFQSKPAIFQHCALRHSSDSAAEASTPCKASTKESEEMRSLYKPGKAAKTFIPPFKTKLTFSTCEQGSSKRSDSPISKSMTKEMELNQIRTEQNTADPQDHQSDIQQAADTDLENGNLAVTWMVTNLRCARDLQEMRIKKKCRQNIRSQPGTLYVIKTSASNRISLKTAVEEKSPSFYSTEELYTLGVSKQCVQVNSTNAESFQFLIKDFFSKEYLLAGNGMQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIIWKLAAMEVSFPHEFANRCLTPEMVLLQLKYSRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLDAVASPGNSNKNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRRLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLGFHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRTYPVQWMEKTTAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKHEERSSRRTPRSRIVTRQQIRNLQDGAELYEAIQNASDPGYMEGYLSDDQLKALKAYRQLMNDKKHTQMQEQLKKALESAEQEENGCYKRDVSAVWRLYVTDYRKQEKHKGAVLSIWRPLPDVCSLLKEGTRYRIFQLSASQPRGRADSTNIQLTATKKTQYLQLPVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVSRTGFTTVVYLSDESYNLVAIKIWTDLRHLAIEDVLVRCSLISASNLQWQSEFRSEIPVLLAGDLSLFSASPKEFYLQEKVNELRSVIENVASFCSDAESKLMNLLRRNLLLTPSLTKRCGLESPSPSCSFAEDKSLMSSRTEMKYPSPLSTSTPSMKVVTPGSAKAPSSATVDEDHLKTSKKRKAMDFLSCIPAPPPLTPICSVISPSVKRAFQPPRSLGLQHSKSPKVTDQNSGYVTPCRKVRETVHLPENDLVADEELAMINTQALVNNLPEEKKMDVNENSTATATTLSDDLSSRNSSRSTGEANNSSKSVLK</mol_seq> | |
1292 </sequence> | |
1293 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ficedula_albicollis</property> | |
1294 </clade> | |
1295 <clade branch_length="0.064837"> | |
1296 <name>ENSTGUG00000011763</name> | |
1297 <taxonomy> | |
1298 <id>59729</id> | |
1299 <scientific_name>Taeniopygia guttata</scientific_name> | |
1300 </taxonomy> | |
1301 <sequence> | |
1302 <accession source="Ensembl">ENSTGUP00000012130</accession> | |
1303 <name>BRCA2-201</name> | |
1304 <location>1:50805062-50838975</location> | |
1305 <mol_seq is_aligned="0">MACKPVERPTFFEIFKAHCSESDLGPISLNWFEELSAEAPPYEPKSFAELDGPSGWLDQTAFKTPRTKPSTYSHLASTPLLFKEQNSILPPCSSPEKEPDQKKIGANRENLISPSNTRRKIDQENEILASPPGTCHNCLAASPAVLRSTYRTPQRNNIPGPYGSLFYTPKLSEVRTPKCISESLGAEVDPDMSWSSSLATPPTCVETVIIARQNDSISEAKQQDGRADTILHNYFYKHDKCPGISDASMLSVPETVKLNPEDDIKDFKSEVLDGLLGEMDSFEDTVSMPAESSGTLLLIPHALDAVEKYEINPEKTEEKGDVPSQQPDGKKNGISQEVKTNGWKLENSHCTQVNSSLLQNTSEDGCLIGHKKELESLRNAGDVNDYRPHESFENERPVKESVNSPSSQWSQLNLSGLDKAHMEMSVCSSAPSDLRGGENLEEKSLLMAKDDPVETSLLNSSCLIKAQKLLSVDLSEKCCEMKNTENNSTSEITPVKSVSLSVQDPELVKGCAAEVSKMSFLNCNSFLIEHGNDTECSVVYSEKFPKHLKATSKSVVTDVLSHPLVSSAKSPDNCDDLYLINSENTLTKSGFKNLKMLPSLRKRSKKFIYRINNTLLYQDEKIQKEVTSESPIHTALPHLESDSYEFRDCLVASDVEQDCTFGKYLESNMRTKNFSTSTLKIDLMDNSSDNSFSDGLKQQDLEDLGENAREDQPAASIKCLEVSNTLKEDTTNSLNSEIVSNIKRKVLTSACLMARKRSRFLPKSCALGKGEEGKDISAKVNNGAAVPQSLKELGSSHRDKELLIDIHSDSMSLCQINFGITGVSSDCCNKLSPNKRHSADQRSGVDCGEVQRPLGINCSENDSTVLKQGEKTDAAAFSEDVANTENSKSPQAAAFSNVPVDISKELLGCGDNSLNEVISLEDKQVAPTYSSKMPNKNLKCKGESSVNLNACSLNLGFSGFQTASNKQIKFSEASIAKGRMLFKDIENECFGASSMERVRNFSHQVKKENMLFSDSKSKLGNSQASFLEPRHTQFTPHKVGSCKSFPRTPQALQESNHTLTASQEAEIAELSSILEETGSQFEFTQFRKQSNAIQKTAETHGTKNVENISDTRKDVEVCSTFDSENQVKNDKYCAQEEDTNEDTELVKNEKENAVFFHENDKKVTLTDLDINESRRSDESFPIAKQDSFSNFIGFTSAGGKKINISKAALSRSAELFRDLDDDNYLFKSSETATRCHNSNGSMSSNSNFSRCLTKESKEKTVHVSDFKSVNAVSHTGSNKNEEHTSTVFKENMENKTKISVNNTENVSFDSINIINSLLSTKNHNQNYKTSKEILNQGDDEGNLQDHSLDVTCLEDAITTVEEHRLSTSYGMENQSPKQREDRKENECLSPKLQTPAGGDIFIPDAALDYSLPLFSVQCGEGDVNVLENSDKEKTDCKNMEEDTSHNKNLLVNESRIKIGSYHHSQIPLEQEVNMGGNEVEGSYLTGFRTASGKKIAIADGFLAKAEQFFADVDIGNDNFETLTEKRKCGKNCVKDCDLCIESVAQCDSEKLNLNEKLVAEELGDQAVDSSPIKHAMILDPACEGSLVTSHTHKKADVRPGKSELESLKGQKIDVLSRTHLSEDGKFLAEKMVDYLSRKRDDLGNTHDFPVHSAASLHLIKVPHDVKDNSVPGGTKNTLFVEESNNKGDQSLLLDSKSSCSYINGDSKEFNLKHLNEPAADKNCFTDTIDSACQNQTLVSLLEEETNFNRLKETTLKVEKQRGDLKQTVFSTAKGKAVSVSESALASVRQMFKDCSEAVKYDIEPNSRRNQTEIARNSSVVLHTECPNSANFFNATTSREVNSATSQFIKVNASADENNHQERSTSADAKSVSNSPKQSFEQNSKLLVHFVPNKQIKPSDASTSHFGFFSTASGKPVQLSEESLRKARQLFSEMEDSHSPHVQEAFLVEEDVEKSKMHIEVLPREMQVVSSKGEENTSPELISDSAFGFSTASGKQVKVSKDAYQKAKAILEESDYILSSGLCTTDQLNSIKDSGQHVKSLTDKVISEFKTEKSCNQDSDFKGICPQEIKYFPSTHHVKMPEHTPYNQKKKHLASFKNNFQQAKTESFGQGQLNLWSKTDSEAISCSATAKAEINTNLLQSPKNYLEVEAAESARAFMEDSFSSSGVQINAAQTFSGRPDKNFQTKTFGKRHFEENNSLGEPPIKRQLLLEFNRTKNSPRSLKASKSTPDGIFKDRRKFMYHVPLKPITCQPFGSTEERQEVKNPTLTLPDQDLRGFQSKPAIFQHCALRHSSDSAAGVSTPCKASAKESEETRSLYKSGKAAKTFIPPFKTKLTFSTSEQGSSSRCDSPISKSMTKEMELNQIRTEQNTADPQDQQPCIQHAADTDLENGNLAMARMVTNLRCARDLQEMRIKKKCRQNIRSQPGSLYVIKTSASNRISLKNAVEEKSPSFYSTEELYTYGVSKQCIQVNSTNAESFQFLIKDFFSKEYLLAGNGMHLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIVWKLAAMEVSFPREFANRCLTPEMVLLQLKYRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLNTVVSPSSSNKNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRQLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLGFHRDPRPFPVPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKHEERTSRRTPRSRIVTRQQIHNLQDGAELYEAIQNSSDPGYMEGYLSDDQLKALKAYRQLMNDKKQTQLQEQFKKALESAEQEENGCYKRDVSAVWRLYVVDYRKQEKHKGAVVSIWRPLPDVCSLLKEGARYRIFQLSASQSRGKADSTSIQLTATKKTQYLQLSVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVRRAGFTTVVYLSDESYNLVAVKIWTDLRHLAIEDVVVRCSLISASNLQWQSEFRSEIPMLLAGDLSLFSASPKECYLQEKVNELRSVIENVASFCSNAESKLMNLLQRNLLLTPSLTRRCGLESSSPSCSYTDNRSLISSRIEMKHPSPLSTSTPNMELVTPGSAKTPSPATVNEGHLKTSKKRKAMDFLSCIPAPPPLTPICSVISPSVKRAFQPPRSLGLQHSKSPKETDQNIGLVTPCRKVRETVHLPDDDLVADEELAMINTQALMNNLPEKKKMDYINEISKATATTLSDDVSSRNSSRST</mol_seq> | |
1306 </sequence> | |
1307 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">taeniopygia_guttata</property> | |
1308 </clade> | |
1309 </clade> | |
1310 </clade> | |
1311 </clade> | |
1312 <clade branch_length="0.35271"> | |
1313 <name>ENSACAG00000004541</name> | |
1314 <taxonomy> | |
1315 <id>28377</id> | |
1316 <scientific_name>Anolis carolinensis</scientific_name> | |
1317 </taxonomy> | |
1318 <sequence> | |
1319 <accession source="Ensembl">ENSACAP00000004459</accession> | |
1320 <name>BRCA2-201</name> | |
1321 <location>3:183721796-183749387</location> | |
1322 <mol_seq is_aligned="0">MEDTIVTQSKPQHRCNALSLATKNLEKRSSQNLLSTKILTCVCDSEKSRNTETKHSTPCNIPRKGNLYSHCHTYSQTPENYLETEASESARAFMEDDDLTDSEAERNKKAFASNSEINNSYSYARAGKRCMEKENTFGEPPIKRKLLPEFDQSERSSLKASRSSLDGTMNDRKTNIYGILLKPVNCDSLSFTKEVKKPNFTTPGRDLKGFKSDGPQQHVSKHSSSTSSCVFKQFSNTSVREESKKTDNPTAKTTIKVFVPPFKTKPSASEDEINSKESYFQNNNSVHGELSNTKVHETFLQPEKEKYEKISAVDSEIREIDLGLTNIASLHCARNLQEMRILKKQKQVIGPQPGTLYLMKICATSCRIPLKTAVDEKCPGSYFSEQLYAFGVSKQCLNVNSSNAEHFQFHIQDFFGRECFLDGNGIQLADGGYLIPTDDGKAGKEEFYRALCDTPGVDPKLISKAWVYNHYKWIIWKLAAMEVAFPQEFASKCLTPERVLLQLKYRYDVEVDKSCRSAIKRITERDDVAAKTLVLCISRIISLSSNVSCISGNKSTTEENKKDVAVVEVTDGWYGIKAVLDPSLQSLLHKQKLTVGQKIVVHGAELMGPQDACSPLDVPESLMLKISGNSTRRARWYSTLGYYRDPRPFTLPLSSLFSDGGIVGCIDVVVQRIYPTQWMEKTSTGSYMFRNCRAEEREAAKHAENKQKTLEALLANIQAEFEKNEETGEGKRVLRSRTLTRQQIRSLQDGAELYEAVLNAADPAYMEGYFSEEQLKALNSHRQMVNDKKRAQIEAEFKKAVESAEQDKSSSCSRDVTPVIKVRIVDYRKEEKEVILTIWRPSSHVCTLLKEGCPYRVFHVAASPSKGRAEPTNLQLTATKKTQYLQLPVSQEVLSQVYRPRECLMFSELLLESFRPACSEVDLVGYVVSLRKGTGFSTLVYLSDKDHNLIAVHICTDLRQFAVEDIIIPSMLISATNLQWRPKFYSNIPSLFAGDLSTFSSKPKETRLQEIFNDLRNTVESDSCFQKDAERKLATLLQTNVPQVMNLPKEHDFDPFPSPWRSDAGNKHLISTPNTELRLPSPLSIKRPNTKAPGSLCSTKVKADLQETPKNLEKRKAMDLLSQVPSPPPVKPICTFISPSLKRAFQPPRSSDPHHERFLKKTESTVREPGVKRPNETNFQLENYFVADEELAMINTQAFLSNSTEEKEAGFTEKIAHTSHNDSSNSFSLRNNSCPSGKDKT</mol_seq> | |
1323 </sequence> | |
1324 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">anolis_carolinensis</property> | |
1325 </clade> | |
1326 </clade> | |
1327 </clade> | |
1328 <clade branch_length="0.774548"> | |
1329 <name>ENSXETG00000017011</name> | |
1330 <taxonomy> | |
1331 <id>8364</id> | |
1332 <scientific_name>Xenopus tropicalis</scientific_name> | |
1333 </taxonomy> | |
1334 <sequence> | |
1335 <accession source="Ensembl">ENSXETP00000060681</accession> | |
1336 <name>brca2-201</name> | |
1337 <location>GL172716.1:1071058-1096238</location> | |
1338 <mol_seq is_aligned="0">MAAPQLGKSVFYDLFSTHCSHSDLGPISLNWFEELTAEALPYKSRTCEDHECSLDDLHENNIKTPKLKSSIYSQLDSTPVIFKERLLSPLFASSLTELDKRQNATDNGNNVRLEKSNCTQMQHQASEVFSPSSRCLNESPAVIKEIFKTPLRNKYLHKTPQCDWKPDICSSLFCTPKLMKNQTGCIKESLGAEVDPEMSWSSSLATPPSPTVIIAHANDQPSGNKHAAIVQSLFPNCENMEANNLPPPETGTQNEDRQICAGLEKPGSCSASKTVPEASAISSRAAWKKTVANTVKDEEVSRTVENALEGMEDVLSIFFASEKTPGLRKLKNSTQARRKVESIKSQKCQVSLFKAEEGESILVPLDEHHKCDHEMLMKPEQDYKMNAVNQKIAKETTPYEWSQLNICELDITQSQDSTLHAANLCCEDITVNKSDTCNITEAEKQEEVNEPSTDNVLSNKVGKESTLNVNCINADLNNMASSSNNSVHSLNLSQCEKMDSSEISNSEVGCITKLTTHPAKITTGELSSVDDCAKKPQERVTISTSFSTLKKQSKFMYSVNTVLTGHIASNTSIATRRSLNSHLSSDEPKPHIKENQNEPESNAKYYSNGLQKPVFLEKENDNKGISLCKTISDGQNTSEGARAPDYFEERVPETKDRCKATLSIREKVVATANCFARKQLETDYPEDASAQHEALQFHAKQYVSCSMLNSNVSNDMQIKPQVLTQACDFRSSAENLVEKTKNQLRRNEDQSFSSTGIGKKPASGEKLVGDCNEGSFLHVKQEISAAQALVGNGYETRDTPDVTSDHTRSVISNHGKSLWEEETALTELPVPEILSKTFKGFKTASNKKIHISDKNIVKGCDLFKEIEFGIGDAKPCNEENKEPLKKTPFDVPGYETNLKGFKTASNKEINVSENKFAKGRLLFKDIEEESGQTTAIMAKDNELFIKPASSNKPDIFKSTCIKGMNPSENLDSMPPKKGDVQQSAGLKHSDQIDVFGFDDPPAKGNVQTLGYFNMSASETDFKGFKTASNKDIIISESTLAKGKLIFEDIEDTRYSETGRTIDCKAKGGALSTSNLVMHNTMCKNEPSTSENTNDKAPKRAKVQTPMAENSHLKEPSSDKNAMDAANHQMTLKASAYSPKAASSALPRYKKKPISTTKTSFQLNEHLTESQQAEISELSSILENADSQFDFTQFRKVPSVTEKQNSTEGGSESQNLNNSDVWKDVDFNDSFAAGRDHSEGMEAIPSSPGIKELPSAGECCSKETHDSMPDFVTLAPKQGFLVKQNERLFAGFNLASGKQVNIDNDVLKKAAELFNDIDNDKELLSHAKEESRKSNIKHSSKLINNENCGKTEHTSEHLVCQSNVSLPFIKTLGKNATILVSGNEKSQNQELQLDCLKCESTDVKHTPQKETINDNSKCNESSLSELSMKGFQTASGRNIMMSESSIQKARNIFAEEHEDSFTLRCNIQNTIQIPQPVNEPTQFPYVNLGPKPTTTSGWQEKNILRRSTEKGFMPGFCTAGGKKVSVSDNSLAKAHKLFQEECTFSKEGKLDEVKQNKLMNSEPLSLLTCESVLKQSDGFIEDISTSRNALEIRPELYPEGMCSNRASNGSGNNSEFTAGEGISININQSSLLTTGNVLKNLPSESSGHDVYSVTEHLSTVVKVKRYNDSGHFVNQNLAECNDNHVLSTQKNTANISNRNEDCTSLAPLSFSTASGKSVTVSHDSLQKARLMLSEAANDVTVDTSKQEAAYITPAIRKTEAEKEQNTVDDSDRVNANTFSFSTASGKKVNISGNSLKQVRAVCLSSDPKETSAALFNVEKSVFNEDVKDVSLLQPNVTMPKAVSFSTASGKTVQLSDESLKKARVIFSEIDTCPLMQQQTNESTVEEIVIGGGMTKSKQMPLTTEKVETTRKNNGTFGFNTASGKQVSVSESALQKVKDIFQEFDDPDNYEQNKSLVRLPVSSKIKESTPGTKRLVQTAGSSYKNDNLQCKAGNLRTFQDKQAGKKSLTYSEAAISPIESSVPIYEMQVMLKHTNNQACKYQPRVEVPLQDQRWQNILEIELPATCAPAFRETHNILFFGDLQHSTHFDICSLYSGKNPAVKHQLASHSKMQTLVISGRDSSGTLTLQFTLRIVILHTVNNQYSLNKQLFTFSSALRQVTCIPTQAHLHSKVKIFHQSLPIKSPDVASDSTSKSYSPTAAKETINCSSASKIPAKKFVPPFKKTVATLADNQSNSVQNGSSDGLIESIVYPKEDKVETICSSKDQFDDSDILQMTSNLRCSKDLQEMRIRKKLRQKIKPHPGSLYRLKMSHVKRISLQSAVAERCPTLYSREQLYRYGIVKNHIGVSSENALSFQFHCSNYFTKELLLSGNGVQLADGGWLIPTEQGNAGKEEIYRAFCDTPGVDPKLISAEWVHNHYRWIVWKLAAMEVRFPKTFACRCLTPERVLLQLKYRYDVEIDKSQRSAIKKIMERDDSPAKTLVLCIAKIISQGTRLPNACSNKTEPADSKESSAVIEVTDSWYGIKVLLDPCLTALLHKGRLFIGQKLIVHGAELIGSDDACSPLEAPESLMLKIAANSTRPVRWHTKLGYFKDPRPFCLHLSSLLSEGGVVGCVDVVIQRIYPMQWMEKMANGLYVFRNDRAEEREAEKHSANQQKKLEMLFSKIQAEFEQREVTCNRRKGLRRRSLNAQQMQTLQDGAEIYEAIQNESDPGYLESYLSAEQLKALNHHRQLLNDKKQALIQAEFRKAIECSEQDANGCTRRDVTPVWKLRIADYRNYETDAAYILNIWRPLPDVLSLLKEGCRYKMYHLAASTSKGKSLAADLQLTATKKTRFQQLQLSESILEQIYSPREVTDFSRFQEPLFSAPYAEVDLVGLIISIYKKTGAAPVVYISDESHNIVALKFWTDLGQLGLEEITKPRTYISASNLRWRSDCIEGIPTLYVGDLANISSNPKESHLQRAIQKLKLSVQNVQDFWNSSQTALMKTLQINSTDTTECSKNPTTPTWKSDVSARSGYLTPLHHSGKRLLNSVHTSDPQTENPGCSKEIQLKTCKKRKALDFLNRIPSPPPVTPVRPFVSPSLQKAFRPPRSCSVQKLGPETKGNTENVQGTTPECTKDLAKLEGEFVADEELAMINTQALLLGLEEEKKKTEQKTSRTAGKMTAHESPIENASPVPAQEQQTEEALNIPVGNSEKSYLCLRKRKRK</mol_seq> | |
1339 </sequence> | |
1340 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">xenopus_tropicalis</property> | |
1341 </clade> | |
1342 </clade> | |
1343 </clade> | |
1344 </clade> | |
1345 <property datatype="xsd:string" ref="Compara:gene_tree_stable_id" applies_to="phylogeny">ENSGT00390000003602</property> | |
1346 </phylogeny> | |
1347 </phyloxml> |