Mercurial > repos > earlhaminst > ensembl_get_genetree
comparison test-data/genetree.phyloxml @ 1:98aba0efe77a draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/Ensembl-REST commit aaf8d501c3a92ed415fdf9293a65468c72aae984-dirty
author | earlhaminst |
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date | Mon, 12 Dec 2016 07:47:26 -0500 |
parents | f0018341e9f6 |
children | 950d9d11b6fb |
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0:f0018341e9f6 | 1:98aba0efe77a |
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2 | 2 |
3 <phyloxml xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://www.phyloxml.org"> | 3 <phyloxml xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://www.phyloxml.org"> |
4 <phylogeny rooted="true" type="gene tree"> | 4 <phylogeny rooted="true" type="gene tree"> |
5 <clade branch_length="0"> | 5 <clade branch_length="0"> |
6 <taxonomy> | 6 <taxonomy> |
7 <scientific_name>Euteleostomi</scientific_name> | |
7 <id>117571</id> | 8 <id>117571</id> |
8 <scientific_name>Euteleostomi</scientific_name> | 9 <common_name>Bony vertebrates</common_name> |
9 </taxonomy> | 10 </taxonomy> |
10 <clade branch_length="0.153275"> | 11 <clade branch_length="0.149761"> |
11 <confidence type="bootstrap">95</confidence> | 12 <confidence type="bootstrap">92</confidence> |
12 <taxonomy> | 13 <taxonomy> |
14 <scientific_name>Neopterygii</scientific_name> | |
13 <id>41665</id> | 15 <id>41665</id> |
14 <scientific_name>Neopterygii</scientific_name> | 16 <common_name>Ray-finned fishes</common_name> |
15 </taxonomy> | 17 </taxonomy> |
16 <clade branch_length="0.155187"> | 18 <clade branch_length="0.148891"> |
17 <confidence type="bootstrap">19</confidence> | 19 <confidence type="bootstrap">33</confidence> |
18 <taxonomy> | 20 <taxonomy> |
21 <scientific_name>Clupeocephala</scientific_name> | |
19 <id>186625</id> | 22 <id>186625</id> |
20 <scientific_name>Clupeocephala</scientific_name> | 23 <common_name>Teleost fishes</common_name> |
21 </taxonomy> | 24 </taxonomy> |
22 <clade branch_length="0.133192"> | 25 <clade branch_length="0.181209"> |
23 <confidence type="bootstrap">18</confidence> | 26 <confidence type="bootstrap">46</confidence> |
24 <taxonomy> | 27 <taxonomy> |
25 <id>123368</id> | 28 <scientific_name>Otophysi</scientific_name> |
26 <scientific_name>Acanthomorphata</scientific_name> | 29 <id>186626</id> |
30 <common_name>Teleost fishes</common_name> | |
27 </taxonomy> | 31 </taxonomy> |
28 <clade branch_length="0.374304"> | 32 <clade branch_length="0.421267"> |
29 <name>ENSGMOG00000009699</name> | 33 <name>ENSAMXG00000013027</name> |
30 <taxonomy> | 34 <taxonomy> |
31 <id>8049</id> | 35 <id>7994</id> |
32 <scientific_name>Gadus morhua</scientific_name> | 36 <scientific_name>Astyanax mexicanus</scientific_name> |
37 <common_name>Cave fish</common_name> | |
33 </taxonomy> | 38 </taxonomy> |
34 <sequence> | 39 <sequence> |
35 <accession source="Ensembl">ENSGMOP00000010385</accession> | 40 <accession source="Ensembl">ENSAMXP00000013440</accession> |
36 <name>brca2-201</name> | 41 <name>brca2-201</name> |
37 <location>GeneScaffold_2233:16156-29802</location> | 42 <location>KB882257.1:1212119-1232402</location> |
38 <mol_seq is_aligned="0">LARDLQDMRLRKKKRQTVRPLPGSLFLAKASGGARIPLRAALRQLYQHGVHQPVWTVTAENAESFRLSFRRFFRWGSSVSRGVQLADGGWLVPRDDWTLGKEEFYRALCDSPGVDVKLLSQEWAYNHYRWVVWKLASMERSFPLTMASLWLNPEQILLQLKYRYDVEVDHSRRPALRKITERDDAAAKTLVLCVCGVVPGADQQPQGSHAPPPGVVWLTDGWYAIKAQLDAPLTAMLRRGGAGGKLVVYGAELVGSQDGCSPLEAPEGLMLKIGANSCRRARWDAKLGFQRDPRPFLLRLSSLFSTGGAVGCVDLLILRSYPVLWMEKKQDGVFVFRSGRAEEREARRFDDHNNKTMEALYAKIQADIQREDKGSARERNSGEELYEAFENDPAYLEACLNDQQLEVLQSYRRSVLEKRQAGLQERCRRALEQAQESQGGCPRRDVTPVWKLCVVDARAPPGYMLNVWRPPADLQAQLKEGARYRVYNLSVTAGKKRNPGASVQLTATSKTHFQEVQVGQDWLSDHFQARQAVHFQELQRPEVQSACGEVDLVGYVVTTADTHGTSPVVYLVDGDLNLVKVRCFSSLLQWGLEELVKPATLLALSNLQLSARRATTLPVLYASDLTAFSSNPREAHLQSSHSNADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRALDYLSRMPSPPPLGPLGSLASPACVKKTFNPPRRSTTPAAVATTRQTPAHGPRVGPWQEEEWENDEGLAQIDTQVL</mol_seq> | 43 <mol_seq is_aligned="0">MIEDFFHQIETEELGPLSSDWFKELTAKASKDESFPGAVEHEASSRTEDGTFRAPQETPALESQMSSTPRLFRVRGPLSPDSVLGRSPNPAFQQQGMQTPLSTLPWTDSSPCLFGSAKESQRFEEDSEPLKKHDYFGLLDTPKSSLVQDSSAKRISESLGAQLHPDLSWSSNFNTPGAMSPTVILTKKDAQPSPVSFLKDKEVIIVRKLFPSLSKGTESTSEITSTAHNNASLTEENAQTKGPDESFDNVEGLWRQTVPDAINDSDVRDTVESVLDGAEDVLSIFFSNSSSALRRVKSKERTKKRVNGVSKDVKPAALATQHYTDRTGTATEAKSPPKNKDFSQWSPLSLSQVSDAKAKQDCTSDLANKHLNFESVNSDSGEDALKDSITQLGQFNTCEVEKQKSSPDSYPEKSQLRSSLLAASPALTFSRKPRKFVYQVQSPFPPTKENDLTGKHYREPFLTAENKKHIKDDPQTSDTVGDCLVHPKEPPVKQGNPGALNVDHGLDMTQLCNAFAEDFTQEIRSDAIKIDEVQTKAESVLHSDDGAEHLEFPANHKEASALAEESINLTSRSRMENTLSESLKHENGYPAVFNDVSGLSSSCNDGADKYLYSGFKTANNKLIHVPPEAVMKAKATFEDFVDLEEIRSDGLNTGSGTALNSSVVSTWSSERYSHALNKPEREPTGNLLHGSLDVASGCTSTSYLPKTNDSGFKTASNRSITISSVNLEKAKDIFKELEVENLYKTDICPSSNSAELEIQVMKNAKVPKLDIKRNVDGNYVLTASQKADVTELCSMLEDADSQYEFTQFRQAKPCSKSMESSRSEREWDPEILSGIDFDDSFNCDTERQLPRKWPVRPDLPTQNGPVSNSMKNGKETPKAELSLNDYRLSLRSDGREMAKTPAVQTNTSEGNEPVCVGFKTARGNSVRISEKNLTKARSLFADLEDCVGKIGLKSDHNSVTAQVTTKQTKHNQNSHNKDDVCKQICSTENPEDQDNPQGTKQNEKPDLLVDTRHCGFSTAGGKELKVSESSLLKAKKLLNKVSDQCEAVPSIKAPPNRVTTLKVANINLQPSVCSNSKVSENVFPHNLKMSCKSLTGNSKDQMFRNSESHHRLSEIEQQTTAKYQSTKSIQSSGFKMASGKGVSFSSSAIEKSRAIFRDLDSLIAEDGSNETKSMDENAKLHDEAERSQCKFANGFKMASGKGVSFSEGAFLKSKAFFKDCDADYPDHSQGKGDQSSVMDNCGFKALVGNTVHLPEIDSPNKEIVGLKDEATVLNKYVEKEFVPTSAPEILQFTSGCGFSTASGKMVSVSAEALQKAKAVLDDSSAASPCEIKADVSEEKNKKGVPKTDTYIPGRSLGFSTASGRKVAISDRALEKAKNLFASCEVEDLANNGITLNSAQTKPLGSEQTRCLGFSTASGKGVAVSEKTLKEAKAVFAGCEDILETADVHKPLKTGRVVEEKDKGSLNQSLTNREFQTCESANFRLSSGKCEEINNANKSNVKVEQFGFSTASGKGVSVSKSALKVAFEMFRDCDVQPITEEQHPVAQIDCPSSSDETRRHTTDTTTLSLSTQAIRDDSSLLNSHALSLNGCTMTQQKYLEQEAMACTKALLEDDFNEHSRSEPVEETVIRKCPTLAEQRSYEVIIGERKRTSDADLTGKALSNSSQPPLKRRLISEFDQISDGTRVCVPVKSSPNGTLTDRRVFKGNVHLKPNITHPSSIGSVSKKSKNIMDQNASKALDGEKRRPSNPKAVIFIPPFQKNIKPTRKVPTNYVSRDNAKVPTMFIPPVKKNPMSNVLQGNSIQSCTDSDCEKLEKEDTLEVKPNTAGNHDSEPEKKEKEVEEDQYGSFEESLELARDMQDMRIRKKKRQTIRPLPGSIYLAKTSGVTRISLREAVNNKCPLLHSQEKLYQYGVHCQVSQITAENAELFRFNFDDFFKREMFIDNTGVQLADGGWLIPDNRGTVGKEEFYKAMCDTPGVDPKLMSEAWVFNHYRWVVWKRACMERTFPEVMGGRCLTPEQVLLQLKLRYDTEVDNSRRSALKKIMERDDTPAKTLVLAVCGFAKSSSSPVNSEKAVGTPDSKTSESTAAIIWLTDGWYSIKALLDPPLSSMLQKGRLSIGGKVMIHGAELIGSQDACLPLEAPDSLMLKISANSTRRARWDSKLGFYKDPRPFSLPLSSLYSNGGVVGCVDVIVLRSYPTQWMEKRTGGVFVFRNERAEDREARRHSSAKQKTMELLFTRIQAQFEKEEEEKKKTRRRKRFRRCDIHSMQDGEELYEAMENDPAYVEAHLSAQQMEAVSSYRRVMADRRQVQLQERMQKSVQEAQESEGLCPNRDVTPVWKLTIADFSDLHSNCTYTLNIWRPSLELRSLLKEGCRYKAYYLSTSETKKRSGTANVQFTATKKTQFQDIEVCPEWLMANFPARQFTIFRDLQNSAFSSPCGEVDVVGYGISILDRQGASPVLYLVDDKFDFVSVRSFSSLVQLALENLVKPLTLLAISNLQLRELSGPVPRLYAGEQALFSVNPKEAHLQEAMAHLKTFVQSYENFFSVAEEKLSNLLPSGSVKPAQSPRTLGVSSVPKLNSRINVTPQPPKVHSPFTPVSRRAPTPTDQTTEPKDPKSLKRKRGIDFLSRVPSPPPLNPLNILTSPNVKKTFNPPRRSETNRPARRDPAPSRRSASLAPSVEEQWVNDEELAMINTQTLLD</mol_seq> |
39 </sequence> | 44 </sequence> |
40 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gadus_morhua</property> | 45 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">astyanax_mexicanus</property> |
41 </clade> | 46 </clade> |
42 <clade branch_length="0.201095"> | 47 <clade branch_length="0.555104"> |
43 <taxonomy> | |
44 <id>1489872</id> | |
45 <scientific_name>Percomorphaceae</scientific_name> | |
46 </taxonomy> | |
47 <clade branch_length="0.015782"> | |
48 <confidence type="bootstrap">38</confidence> | |
49 <taxonomy> | |
50 <id>1489922</id> | |
51 <scientific_name>Eupercaria</scientific_name> | |
52 </taxonomy> | |
53 <clade branch_length="0.159219"> | |
54 <name>ENSGACG00000011490</name> | |
55 <taxonomy> | |
56 <id>69293</id> | |
57 <scientific_name>Gasterosteus aculeatus</scientific_name> | |
58 </taxonomy> | |
59 <sequence> | |
60 <accession source="Ensembl">ENSGACP00000015199</accession> | |
61 <name>brca2-201</name> | |
62 <location>groupI:13362884-13366744</location> | |
63 <mol_seq is_aligned="0">LPNVELAQDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVTRIPLKAALVFLLQLYRHGVHQHVCEISSETAESFRFNLKQFIKREALLDGGGVQLADGGWLIPSKDGTAGKEEFYRALCDTPGVDPKLISDGWVDNHYRWVVWKQASMERSFPETMGGLCLTPEQVLLQLKYRYDVEVDHSRRPALRRITERDDTAAKTLVLCVCGVVSRSFDDSKTPRGADAGGGNPSAVVWLTDGWYAIRAQLDEPLTAMLRNGRVAVGSKLIVHGAQLVGSQEACSPLEAPEALMLKICANSSRPVRWDAKLGFHKDPRPFLLPLSCLYSSGGQVGCVDMIVLRSYPIQWMERKPEGGVVFRSVRAEEKEAKRFNGLKQKAMEILFAKIQDEFEKEDKGRTCDFTTQAISRQAIAGLQAGEELCEAVGEDPAHLEALLSEQQVETLNTYRRCVMEKKQAQLHDRFQRALESAEASEGSCPKREVTPVWRLGVADSRDQRGRVYQLNLWRPSSDLQALLKEGRRYKVYNLTTSDGKKHNGSSNVQLTGTKKTQFQDLQASREWLSTRFQPRVSACFVDLQNPEFQSLCGEVDLTGFVIQIVDGQGFSPAFYLADGELNFVKVRCFSSFAQSGLEDLVKPRVLLSLSNLQLRGQSASPTPVVYAGDLTVFSANPKDAHLQESLSQNKNLRQSQENFFLIAEETLSRLVQSDGRRPLSSPALHTRTPALATSMIQDTTASVKCVLLMQGASQQLVRSRGTFTPVSRKPPAANCSTEKDAGSVKRRRALNYLSHIPSPPPLLNLGSVASPCVNKTFNPPRRSGTPSTLKTVQTPAHKAQKVDSLVEDEWVNDEELAMIDTQAL</mol_seq> | |
64 </sequence> | |
65 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gasterosteus_aculeatus</property> | |
66 </clade> | |
67 <clade branch_length="0.217419"> | |
68 <confidence type="bootstrap">100</confidence> | |
69 <taxonomy> | |
70 <id>31031</id> | |
71 <scientific_name>Tetraodontidae</scientific_name> | |
72 </taxonomy> | |
73 <clade branch_length="0.113355"> | |
74 <name>ENSTNIG00000016261</name> | |
75 <taxonomy> | |
76 <id>99883</id> | |
77 <scientific_name>Tetraodon nigroviridis</scientific_name> | |
78 </taxonomy> | |
79 <sequence> | |
80 <accession source="Ensembl">ENSTNIP00000002435</accession> | |
81 <name>brca2-201</name> | |
82 <location>16:4700614-4705074</location> | |
83 <mol_seq is_aligned="0">VSFSSDTPRKPKAGSLSSEFTDRFLAQEALDCTKALLEDERLVDDPHMTGECLHRCPQFSLLVNLFVKPHTAVLIPEQPPLKRRLLEEFDRTDGSSRGSALNPEKCSPNGIMGDRRVFKCSVSFQPNITTPHRICSQKAERPVSFLSRRSGTNYVETSLPNTTPTKVSALRDSNEARLQKSNFIPPFIKNVKLDTPNSKTASTFVPPFKKSRNSSKTEEEEPKHHFIPPFTNPCATSSTKKHTAGHLHNVELARDMQGMRIRKKKRQTILPLPGSLFLKKSSGVTRIPLKSAVNGKPPARYTPKQLYGLGVPLNVLEITSETAGSFRFSLQQFVKLESLTDKGGIQLADGGWLIPRNDGTAGKEEFYRALCDTTGVDPKLISEEWVYNHYRWIVWKQASMERSFPEQLGSLCLTPEQVLLQLKYRYDIEVDQSRRPALRKIMERDDTAAKTLILCVCGVVSRGSSPQKQGLGGVAAPSSDPQVENPFAVVWLTDGWYSIKAQLDGPLTSMLNRGRLPVGGKLIIHGAQLVGSQDACSPLEAPESIMLKIFANSSRRARWDAKLGFYRDPRPFLLPVSSLYNSGGPVGCVDIIILRSYPTLWMERKPEGGTVFRSGRAEEKEARRYNVHKEKAMEILFDKIQAEFEKEERDNRKPRSRRRTIGDQDIKSLQDGEELYEAVGDDPAYLEAHLTEQQAETLQNYKRLLIEKKQAELQDRYRRAVETAEDGTGSCPKRDVAPVWRLSIADFMEKPGSVYQLNIWRPPSELQSLLKEGCRYKVYNLTTTDSKKQGGNTTVQLSGTKKTQFEDLQASEELLSTYFQPRVSATFIDLQDPEFHSLCGEVDLTGYVISIIDGQGFSPAFYLTDGKQNFVKVRCFSSFAQSGLEDVIKPSVLLALSNLQLRGQATSPTPVLYAGDLTVFSTNPKEVHLQESFSQLKTLVQ</mol_seq> | |
84 </sequence> | |
85 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tetraodon_nigroviridis</property> | |
86 </clade> | |
87 <clade branch_length="0.072273"> | |
88 <name>ENSTRUG00000006177</name> | |
89 <taxonomy> | |
90 <id>31033</id> | |
91 <scientific_name>Takifugu rubripes</scientific_name> | |
92 </taxonomy> | |
93 <sequence> | |
94 <accession source="Ensembl">ENSTRUP00000015030</accession> | |
95 <name>brca2-201</name> | |
96 <location>scaffold_19:196046-199577</location> | |
97 <mol_seq is_aligned="0">QLARDMQDMRIRKKKRQTIRPLPGSLFQKKSSGVARIPFKAAVNGKPPARYTAKPLCGLGVPLNVLEITSETAESFRFSLQHFVKLESLIDKGGIQLADGGWLIPTNDGTAGKEEFYRALCDTPGVDPKLMSEEWVYNHYRWIVWKQASMERSFPEEMGSLCLTPEQVLLQLKYRYDIEVDHSRRPALRKIMEKDDTAAKTLVLCVCGVVFRGSSPKNKSFGDISTPGADPKVENPCAVVWLTDGWYSIKAQLDGPLTSMLHRGRLPVGGKLIIHGAQLVGSENACSPLEAPVSLMLKICANSSRPARWDSKLGFHRDPRPFLLPVSSLYSSGGPVGCVDIIILRSYPILWMERKPEGGTVFRSGRAEEKEARRYNIHKEKAMEILFDKIKAEFEKEEKGNRKPQCRRTINGQNITSLQDGEELYEAVGDDPAFLEAHLTEKQVEVLQNYKRLVMEKQQAELQDRYRRAVESAEDGVGGCPKRDVAPVWRLCIADSMGHSGRVYQLSLWRPPSELQALLKEGCRYKVYNLTTLDSKKQGGNATVQLTATKKTQFEHLQGSEEWLSKHFQPRVATNFVRLQDPEFNPLCSEVDLTGYVITIIDGQGFSPAFYLADGKQNFVKVRCFSSFAQSGLEDVIKPRVLLALSNLQLRGQSTSPTPVVYAGDLTVFSTNPKEVHLQESFSQLKTLVQGQENFFVHAEEKLSQLMSDGLSAIASPAGQIQTPASTVKRRGDMTDVSSNIMVINKTSKVTCQQPGRSHRFSTPINRNSTAHSSAERNPSTIKKRKALDYLSHIPSPPPLSCLSTLSSPSVKKIFIPPRRTEIPGTLKTVKTPNQKPSNTPVDDQWVNDEELAMIDTQAL</mol_seq> | |
98 </sequence> | |
99 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">takifugu_rubripes</property> | |
100 </clade> | |
101 </clade> | |
102 </clade> | |
103 <clade branch_length="0.045551"> | |
104 <confidence type="bootstrap">3</confidence> | |
105 <taxonomy> | |
106 <id>1489908</id> | |
107 <scientific_name>Ovalentaria</scientific_name> | |
108 </taxonomy> | |
109 <clade branch_length="0.320294"> | |
110 <confidence type="bootstrap">100</confidence> | |
111 <taxonomy> | |
112 <id>586240</id> | |
113 <scientific_name>Poeciliinae</scientific_name> | |
114 </taxonomy> | |
115 <clade branch_length="0.056524"> | |
116 <name>ENSPFOG00000001640</name> | |
117 <taxonomy> | |
118 <id>48698</id> | |
119 <scientific_name>Poecilia formosa</scientific_name> | |
120 </taxonomy> | |
121 <sequence> | |
122 <accession source="Ensembl">ENSPFOP00000001575</accession> | |
123 <name>brca2-201</name> | |
124 <location>KI519684.1:85746-101164</location> | |
125 <mol_seq is_aligned="0">MDSCIKNMYDAFKGEIWKELGPLDPNWFELLTAQASLKEGSVADNDELCANQEGHFKAPLEKTATESQLFSTPKVFRHSRIVSPDTEDDPSFTAAQEKETLPWMPTQSPCLFQVPKHCVSNLKCEGVQPQSEESFDLLDSPEKSPATYANHISESLGAQINPDISWTSSLNTPPALPSTLILSKTDESPCPVSVTADRNVVFVRKLFPSLSNSSLKTSRTCQGPVFPVTETCSESPLNQSESHQQQKVADALEGEVCIADAPKTFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDASKSDSAASNEEATADLDSGGLPPTPLVKTGDTAISQWSSLSLSEISSSAVGSNMTLPGDTDSVQPTRPTSKITDSGFTQKKRKFVYTITTTKSQACGQDFELQTADLSLKISESEQENGKSFVNIPDKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFALDFSQMTDLKTAENTQRNFSPAACLSVMKQAKQNGKPANFPNDYSCISKNRRIPTSNQPCSISEVTMMDSGFQSGVVDVTHMTSSSFGLPLLENVGQNRPTLSFKTGMHNFPSANGSGKSKFDVEVPVQRSGTGQAPEHGKEIELHMASISTEELWDKEETVGQSKCSQPQKTPLSLLPAEASGFKTASNKGIHISLANLEKAKLFLEATEDKKSSLDNSTKSYHGIIYKTNSIRETTTDASSNTNPPACAGKSFGNVSSQLTASEKADVTELCALLEEADSQFEFTQFRSGKKLPNHQDNHNPPHKEDKDLDPALLADIDFDDSFSSEGGKQSTVMMNDKVASVLENRTHGEKAKAINQCTGMSDLLKRETPLILPGAEDTEARCLENNKALIHSEAFRTAGGNVLHVSTKCLNKAKALFGDLERNLTDQKPSNQNGENAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKLEGVVCSNNNVGNRNDTKSGKNNGIDTIICENGFRKASGKGISISANYMQEADVFFKDCHVMEHKEGKKSFSNFKSPQVSISKKSVTGCTKLENVNTAVVSHHIKGLHLNEVERNTKFTAALKNEDGKSFPTSKPFAMLHPSKSTDSSAFEELCTGDGFCTAAGKNISVSSAAMKKAEFLLNQIHAPEEINKETNEKEKASKTKCLGDKISNVDTGGFQAVDGKKFAISSAPLKKATLLRESEKSEDEMCISSQQPSPKIPVIPVTNLWSGGFSAASGKPVILSSVALEKAQTLFSDISLNMVKVAESAPFKKDKKHQTEPENICSGFTTAGGANDQMSQEKFDDLVLAKAVQEEEALSADGVLESNNVMWESAGSKKEDETPYADQRFRTNTPVEAVKGCFRDTDKQEKHKENLLPQASCGFKTASGKKVEVSSEALKKAENLLGDCVGVMDTVNAALPESKAIDLPVRNDGFRSASGKPVALSSEALQKAKSLFSDIGFGAEDPDASQMIKSGKNQGGSNNTEKMSCGFTTARGEKVDVLQKNLQKAKVLFKELDDQVLSKAAQEEDAFFAGHDMDINKEMLENDLKGKVHMQRSRKACLAKCYTDDEKRVSISIPECSRDANKQVEQRENILLQASCGFQTASGKRVDVSSEARKKAETLFSEFEEIQDKTNAMSSQSKPSALSLRNCGFHSASGKPMAPSTEAVQKAKSLFGDITFSTEDSDFSQTVKAYGKQDSRSKTEKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLDLTKAMQDADHFFNQEEGWSIESNSEKSSEKTNTAPVNESGSIKGNMSKLRTNTGSICEEPGNGSIKAKQNDSGFQTASGKTVAVSAEALSRAKFLLSENKADEESTCVFAASGKPFSHEALQKAKTSTGGKSLPSGADSQSDDHIEEKSHFSICNLNTKSSNQISDNMQKNKSSDPKFQSLNLAGCTETQHKFLAQEALDCTKALLEDEVLVGQSLLTTSENLQLLDYQQLSEKSAEEDKGRKRRSAEDLTAQPPSKRRLLEEFDRTANNPRGSGLHPVKSGPNGIMDRGVFRYGVFLHPNITKPNRDAKSFVDTRLQNTIQMPHSEQGDGRSAACRMPTFVPPFFKNAKRDALNKPEARDRKKVPAFVPPFKKQRVVQQESSPTQQEDNKQHHSLCLETNSKTDAPLTKTTQSCEEVVTLVNTSNTKTINQSVLKVGSVSSTEMLHVDDKLSGSQDRTENIGLARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVARIPLKAAVNGNIPGRYSAQELYECGVHKHVPEITSQNAESFRFNLLQFVKQETLAEGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTCGVDPKLVSEQWVYNHYRWIVWKQASMEKSFPGTMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTPAKTLVLCICEIISKCQLLHAQSCSDTKMSQSAETKVETPVAFVRLTDGWYAIKAQLDEPLTAMLHKGRLAVGGKLIIHGAQLMGSQDGCSPLEAPDSLMLKICANSTRRARWDAKMGFHTDPRPFLLPISSLYSNGGAVGCVDIFILRSYPMQWMERKSDGGVVFRSVRAEEKEARRFNSHKQKAVELLFAKVQAEFEKEEEGSIKRQRRRQTVGKQDIGNLQEGEDLYEAVGDDPAYLEAHLSEQQLETLQAYRRSLMEKKQAELQDRYRRALDAEDNEMSCPKRDATPVWRLCVADSMTQSSCVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKRSSVETVQLTGTKKTQFQELQVSQEWVSSHFRQRISTDFVDLQNEEFKPLCGEVDLTGLVISVVDQQGPSPAFYLVDGKKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVVYAGDLTVFSTNPKEIHLQESLDQLKNVVQGQDHFFLTAEEKLAHLIKSDGSCSSSLQPQTPVAARRQDSKTNVAFLKPIKSLGSFTPVSSNLPAATSSTEKDPKTLKRKRALDYLSRVPSPPPISPLGSVVSPCVNKTFNPPRRSGPPSTLKPVQPAAPKATDSVVEDEWVNDEELAMIDTQALHVGNLF</mol_seq> | |
126 </sequence> | |
127 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">poecilia_formosa</property> | |
128 </clade> | |
129 <clade branch_length="0.045736"> | |
130 <name>ENSXMAG00000006974</name> | |
131 <taxonomy> | |
132 <id>8083</id> | |
133 <scientific_name>Xiphophorus maculatus</scientific_name> | |
134 </taxonomy> | |
135 <sequence> | |
136 <accession source="Ensembl">ENSXMAP00000006983</accession> | |
137 <name>brca2-201</name> | |
138 <location>JH556673.1:699224-714770</location> | |
139 <mol_seq is_aligned="0">MDSCIQNMYDAFKDEIWKELGPLDPNWFEVLTAQASLNEGNVADNDELCANQEGYFKVPLEKTAVESQLFSTPKVFRHCQIVSPDTEDDTSFTAAQEKEMLPWMPTQSPCLFQPPKLCVSNLKCEGVQPQTEASFDLLHSPEKSPASYANHISESLGAQINPDISWTSSFNTPRALPSTLILSKTDESPCPESVTADRKVVFVRKLFPSLSNSSLNTSRTSLGPVFPVTDTCSKSPLNQSESHQQQKVPDALEGDVCSADAPRSFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDTSKSDNAASSEEDLESGGLPSTTLVKTGDTAISQWSPLSLSEISSSAVGSNMTLPGYTDSVQPTRPTLKITDSGFTQKKRKFVYTITTTKSQACGQDFQTTDPSLKISESEQENGKPFVNTPDKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFAQDFSQMTDLKTGENTQRNFSPAACLSAMKQTKQNGKPANFPNDYSCISKNRCIPTSNQPFSISEVTMIDSGFQSGVADVTHMTSSSFGLPLLENVGQNQPKQSFKTGMHNFPSTNGSGKPKFDVEVPVQRSGTGQAPDHAKEIELHIASISTEELWDREETVGESKSSQPQTTPVSLLPADASGFKTASNKGIHISHANLEKAKRFFEATEDKKSSLDNSTKSYHGIIYKSNSICEKTTDTSSDSSLPACAGKSFGNVSSQLTASEKADVTELCSLLEEADSQFEFTQFKSTKKLPNHQDNHNPPQKEDKDLDPALADIDFDDSFSSEGGKHSTVMMNDKVASVLENRTHGETAKAINRCTGMSDLLKTETHLNSLSGTISEEREFLKLDEPNILPRAEDTETRYLENNKALIHSEAFRTAGGNVLHVSKKCLNKAKALFADLERNLTDQKLSDKQNGKNAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKLEGVVCSNKNVGNRNDTKSVKNNEIDTIICENGFRKASGKGISISANYMQEADAFFKDCHVMEHKEGKKSFSNFKSPQVSISKKSVTRCTELENVNTAMVSHHTKERRLNEVERNSKFTAALKNEDGKSFPTSKPFAMLHPSKSTDLSAFEELCAGDGFCTAAGKNISVSAAAMKKDESLLNQIHAPEEINKETNEKENASKTKCLGDELSNLDAGGFQVVNGKKFAISSAPLKKATLLRESDKSEDAICISSQQSSPKTPVIPVTNLWSGGFSAASGKPVVLSSVALEKTQTLVSDISLNMDKVAESAPVKKDKKHQTEPEKICSGFTTAGGANDQMSQEKFDDLILAKAVQEEDALSTDGVLESNNVMLESVGSKKEDEKPHADQRFRTHTPVEAVKGCFKDADKQEKHKENLLPQASCGFKTASGKKVEVSFEALKKAENLLGDCVGVMDRVNAALPESKAIDLPVRNDGFQSASGKPVALSSEALQKAKSLFSDIGFRAEDPDTSQMRKSGKNQDGSNNTEKMSCGFTTARGEKVDVLQKNLQKAKALFKELDDQVLSKAAQEEDAFFAGCDMDINKEMLENDLKDKVHMQRSRKASLAKCYTDDEMRVSISIPECSSNANKQVEQRENILPQASRGFQTASGKRVDVSSEALKKAETLFSEFEGIQDKTNAMSSQSQSSALSLRNCGFHSASGKPMASSTEAVQKAKSLFCDITSSMEDSDFSQTVKADGKQDSRSKTQKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLALTKAMQDTDPFFNQEEGWTMDSNSEKSSEQTNTAPVNESGSIKGNMSELRTNTGSICEEPESGSIKAKQNEGGFQTASGKTVAVSAEALSRAKLLLSENKVDEESTCVCATSGKPFSHEALQKAKTYFSSGVESLPSAADSRSDDHIEEKSHLSICNLNTKSCNQRSDIIQTNKSSDPKFQLLNLTGCTETQQKFLAQEALDCTKALLEDEVLVGQSLLTTSEDLQLLDDQHLNKKSAEEDKGRKRRRAEDLIAQPPSKRRLLEEFDRTAENSRGSGLHPVKSGPNGIMDRGVFRCGAFLHPNITKPNRDAKSFVHTRLQRTIQMPHSDQGDGRSVACRMPTFVPPFFKNSKRDALNKPEARDCKKVPAFVPPFKKQRVVHEESSPKQQEDNKQHHSLCLETNSKTDAPLTKTTQNCEEVVTLVNTPNTKMINQSVPLKVGSVSSTEMLHVDDKLSRSQDRTENIGLARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVARIPLKVAVNGNIPSRYSAQELYECGVHKYVPEITGENAESFRFNLLQFVKQEMLADGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTAGVDPKLISEQWVYNHYRWIVWKQASMEKSFPETMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTPAKTLVLCVCEIISKGQLLHAQICSDTKMSQSAKTKVETPVAVVRLTDGWYAIKAQLDEPLTAMLHKGQLAVGGKLIIHGAQLMGPQDGCSPLEAPDSLMLKIWSNSTRRARWDAKLGFHTDPRPFLLPVSCLYSNGGPIGCVDIVILRSYPMQWMERKSDGGVVFRSARAEEKEARRFNSHKQKAVELLFAKVQAEFEKEEEGSIKCQRRRQMVGKQDIGNLQEGEDLYEALGDDPAYLEAHLSEQQLESLQAYRRSLMEKKQAELQDRYWRALDAEDNEMSCPKRDVTPVWRLCIADSRIQSSCVVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKPSNVETVQLTGTKKTQFQELQVSQEWVSSHFRQRISTDFVNLQNEEFKPLCGEVDLTGLVISVVDQQGSSPAFYLVDGKKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVLYAGDLTVFSTNPKEIHLQESLDQLRNVVQGQDNFFLTAEEKLAHSIKSDGSCSSSLQPEMPVAARRQDSKTNVAFLKPIKSLGSFTPVSSNLPAATSSIEKDPKSLKRKRALDYLCRIPSPPPIFPLASVVSPCVKKTFNPPRRSGPPSTLKPATIKATDSLVEDEWVNDEELAMIDTQALHVGNLF</mol_seq> | |
140 </sequence> | |
141 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">xiphophorus_maculatus</property> | |
142 </clade> | |
143 </clade> | |
144 <clade branch_length="0.283168"> | |
145 <name>ENSONIG00000005522</name> | |
146 <taxonomy> | |
147 <id>8128</id> | |
148 <scientific_name>Oreochromis niloticus</scientific_name> | |
149 </taxonomy> | |
150 <sequence> | |
151 <accession source="Ensembl">ENSONIP00000006940</accession> | |
152 <name>brca2-201</name> | |
153 <location>GL831218.1:289993-303706</location> | |
154 <mol_seq is_aligned="0">MYETFKDEIWKELGPLDHNWFDILTAQTSANEGGSGSDQDELCANQEGHFKTPLDKTAVDSQLFSTPRVFRHSRIVSPEIEDGQSFSTTQENDTSPWTETQSPYLFQMSKKGVSDTKYEEIQPQSQDSFDPLDTPHKSPMSYAKHISESLGAQINPDISWTSSLNTPPPVPSTLILSKVDESPCPVSVSVDKSVVFVRKLFPSLSNPSRIVVAPPKNALSSTDAVLPEVVSSQTLLTQNEGIWQQTLRGANGDGKICSTVASAPDEFQNASSTFLANSSSALRKVKPDRIRWKQFKLSEHDCSSTDISKTNQSNEEHKADEEHSTIPSSPLAKNGSTAISQWSPLNLSEIPPCTAENNILTELQPDFDPRQLVRPPIKITDTGFIRKKRKFVYTVETLKPKVKENETDFQKMNASSGIPDTVKIEVFLFSTVTEKFSSFLLGPELSSKQSEDAPDEASCCSNERNAEEKQEKSTLENLPSSVQEKVQDLDMSQLHKDFAQDFSQISDSGRRTEGVAEDQNHFSPSACLLAMKKAKHQTKQASLHHDYNSISNTGHMSTTNQNYSTNEGTISDSGFQSAVADITHTASSCIVPCSENTGSKTDIHRTTPFPSTHRGNEKSQLKERQTIDSERECQLDMESTLTQLPSSLKGTDDGLNWIPQNGQVHGRLLEKTGVSLPPAHASGFKTASNKGIQISLANLEKARNLFEERDGDQPTKCNSATKHKNSQSNGSMKSTVSVSNQQTSVSERFEGISCHLTASQKADVTELCTLLEEADSQFEFTQFRGAEVKQPCQKTDKDLDPDFLADIDFDDSFSSDAEKHFAITAMPDKMTRENISAGDVLSSSENIPGRSNWLISTKQKSLHRAEHGEASKMEKPNPLMLSVAFKTAGGNALRVSKTCLSKARALFADLEINVSDLNRSHKQAAETGAKSKKMCNVDSETATDTKQPVSALKQARNMQDKDTTKSFEICKKDAIVNIEFENVNSGLSRPHPDDIEMKSVGCNTVLEFKNPVSFHETPFSTSKLLPCPASKSIDSSAISELSSGYGFCTASGKTVSVSADAMKKAKCLLNDTYTLEDTSKKISQKENALRTAQLTAQNKESIPKTSGFDTATGKGVSISSTAHKKAKCPLSESDKDFEDSVLTNAMQETVDCDIDVNNGGNIVHISGSDSDLGIRPDQRVTSNISVESANKQVKQKDSLPLKSGGFGPVSGKGVSISSEALNRATSLLGQCDEVNNKINVNQSHLKTSVYSPLPTSGGFHAASGKALTLSSEALQKAKTLFSDCREPSCSTHTEHKKLCKVWKWMRSGKPSCSKTPVPENGGFLAASGKPVALSSEALQKAKTLFSDIISSAESPHAKNEMQSGFKTASGKKVHVSQKDLLNAKHLLKDLDDSVFTKAMQMAEDCDMDLQTASGKGVTIASEALRKARSLLGECDEVEDKIVHDSLPQNGGFCAASGKPVALSSEALERAKALFGDIGISAEIPHAKNSHKKYDYGENTWKMQCSSKTVGEKDSGNGCTEVTNEHMKQKNTWPQQSVGFQTASGKGVAVSSEALKRAKTLLSECEGVEDKISITAPQGKISAHGPPFRSSGFLAAGVKPVALSSEAMQKAKALFSDISQSRDTPAVAHTRKNDKKIDAHNGEEMHCGFSTAGGVKVQVSKKSLLKATSLFKEFDDGECHDSLLFSTSPQDYEINKESSTKESKILKPNESSVLNFQSLNLTGCTETQQEFLAQEALDCTKALLEDEGLADHNLLMALENMPLQHNTSADGCQESEKRRGKRSVEETEMNGQPPLKRRLLEEFDRSLIDPKASTLHPVKSCSNGLMKDRGVFKYSTSLYPNITRPHRFQKTPQIQNSTMGDPRSKSAHYKTSAFVPPFVRNAKTETHKNMVLKDSIRTPSAFVPPFKKQRTIVQPTKKTQSDADGTAVAPAQSDDMNNQSLPVDFRSDSAGGETSGVDGTCSRSQADVYWNLQNTELAQDMQDMRIRKKKRQNIRPLPGSLYLKKTSGVPRIPLKAAVNGKIPGRYTPKKLYGYGVQKYVSDITSENAESFRFNLLQFIKREAFTDEGGVQLADGGWLVPSNDGTAGKEEFYRALCDTLGVDPKLISEAWVYNHYRWIVWKQASMEKSFPEIVGSRCLTPEQVLLQLKYRYDVEVDHSCRPALRKIMEKDDTAAKTLVLCVCEIISRGHSPKTQSHNDTKTPHSADAKVETSAALIWLTDGWYAIKAQLDEPLTAMVHKGRLAVGGKLIIHGAQLVGSQDACSPLEAPESLMLKICANSCRPARWDAKLGFHKDPRPFLLPISCLYSNGGPVGCVDIVVLRSYPMQWMERKPDGSVVFRSSRAEEKEARRYNSHKQKAMEILFAKIQSQFENEEKGNIKQQRRRKTISHQEIANLQDGEELYEAVGDDPAYLETHLSAQQLEALHTYRCSLMEKKQAELQDRYHRALEAEDNEMNCPKREVTPVWRLCIADSMELPGRVLVLVYQLNLWRPSSDLHSLLKEGCRFKVYNLTTSDGKKRSSIEAVQLTGTKKTQFQELQASHEWLSTYFQPRVCTNFVNLQNPDFEPLCGEIDLAGYVITVVDGKNTGSSPAFYLADEKLNFVKVRCFSSLSQTGLEDVVKPRVILALSNLQLRGQSMHPTPVVYAGDLTSFSTNPKEVHLQESFSQLKTLVQCQENFFLTAEEKLSELVRSNGLSSSSSPALQRQTPASLTDRRQDIKSSKPGRNLGSFTPVGRKSPTPTSSGEKDPKSLKRRRAQDYLSRIPSPPPLSHLGSVASPCVNKTFNPPRRSVTPSTLKTVQTPSHKPADSLGEDEWVNDEELAMIDTQALRVNLI</mol_seq> | |
155 </sequence> | |
156 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">oreochromis_niloticus</property> | |
157 </clade> | |
158 </clade> | |
159 </clade> | |
160 </clade> | |
161 <clade branch_length="0.178712"> | |
162 <confidence type="bootstrap">22</confidence> | |
163 <taxonomy> | |
164 <id>186626</id> | |
165 <scientific_name>Otophysa</scientific_name> | |
166 </taxonomy> | |
167 <clade branch_length="0.551859"> | |
168 <name>ENSDARG00000079015</name> | 48 <name>ENSDARG00000079015</name> |
169 <taxonomy> | 49 <taxonomy> |
170 <id>7955</id> | 50 <id>7955</id> |
171 <scientific_name>Danio rerio</scientific_name> | 51 <scientific_name>Danio rerio</scientific_name> |
52 <common_name>Zebrafish</common_name> | |
172 </taxonomy> | 53 </taxonomy> |
173 <sequence> | 54 <sequence> |
174 <accession source="Ensembl">ENSDARP00000099674</accession> | 55 <accession source="Ensembl">ENSDARP00000099674</accession> |
175 <name>brca2-001</name> | 56 <name>brca2-001</name> |
176 <location>15:32054010-32070540</location> | 57 <location>15:32054010-32070540</location> |
177 <mol_seq is_aligned="0">MFENFFHQIDRELGPLNPDWFEELNERASRDEGSAESSKAGENESIKAPETSALASQLFSTPRIFKQRHFPQSPDSIPNEKSQNEGANGELSAFPWTESSPCLFGSAKDSPKFDRSSEKPRDCFGLLDTPKRSLARSAKQISESLGAQINPDLSWTSSFNTPPSMTPTVILPTTEDRVASASILKDKESIFVRKLFPSLSKDSENATTLKQDVVTKSESIEADDLGEKTVCSPNESLDISSLWKQRVPNAIEDGDVRNTVQNVLDGAEDVLSIFFSNNTSALRKIKSKERIRKRITNSSEDVKSVFLTSEPEQKLKADTETKSPSKNDDSIEWTPLSLSETILTEGCSSTSLVDNNNTVAPSETNDGAIFKFTSESSQTCPQSVRLESSPEGTQCQKILLDKSSAFMLNKKPRKFVYQVSSSEMSTTLTGSKADLPKCLDQTLKEGPSVEELSVCLNKSSFTNENPIGDQTQPQAVEQLSSEHLDHGLDMTQLSKAFAEEFTQEIMAGGLLDMPVQSNQKVQVQPKAEPESKNKDGNHTDISNLADISVNSPNKSTSITTFEISHDSGCPTTFSDLDRTTASFADIGEYFPTFKTANNKFICIPTEAIVKAKASLDEAAGDGLAKTSNQTKPKHFHVTETMCKSVSRSIPAPRPPVGQSIPSNHASGVSVSDASKTDSPKGFKMNFSNCSLPQSDESDCKTSSKTIITVSDAGLQTESLLKEKLGRSSESSKPIHQKVDFERSAERHAVFDISSTQKPTAVDSSCDDLEENGTLTASQKADVTELCSLLEEANSQYEFTQYKSTNIGSHNRTTEKEWDPDILNDIDFDDSFSCDVVKGKHPSKTNASSVNTSDLISFRSDLKEKQNGTVVLSVTEESALVDGMRSILSKSSDNSHFHTFGFKTAKGKAISVSEKSLNKAKHFFEEDYKEATFTGVINQEHFKTESSVKTCISTENNNAQTKQDVRLSCGEVNAAHNMINWQEAGNAGTEPNCLRDKTDVVCVDSNIHFGFSTARGAKLKVSEKALEQARMFLNDVDSIGESQTPKLVPRSSGKHDVSMQSTRLQKTKDLCRGETSIKISQPDSGVANQISNGADITTFNSENVFQEQKSGNAAKEVCEKISPSETSMPQPQQGYGFQTASGKGVSVLPSALKKAKAIFKDCDSNIDNLQSTNMEERKTKLDVEIVKQTNALISNSKSVTFSDVEEFKTDLINNLDQEAPQKEVCELKGLQSEFSNLISSNGNCGFSTASGKKVSVSAEALQRAKDVLFESVDGFSCANVYKKTNQVVDIQLDSSSSGKHKGFCTAGGKKVAFSATGLQKAKNLFRGCEEESLTTEQNCKGLSNVLMLACNGVSLIPEPGNSSGNNVGFSTAGGRKMDISVTALQKANNLFKDCEEESLASRSLAHQGFTTASGKNVFVSEKALSEVRAVFAGCDETSFSLELKKLSVNNVGFSTAGGKKVTISDTSLQRTMNLFQDCEEESLGSRSLKHQGCKGFTTASGKNVTVSEKALSEVRAVFAGCDEASFSHEPKNISGNKIGFSTTVEKMTTALEMPNNNNNFKDCEEESLASRNLMHQACKGFTTASGKNVTVSETALNEVKAVFAGCDEATFDLEPKKSLGSNIGFSTAGGKKVTISSTALQRAQTLFKDCEEEKEVFESEKAPLPTKSFHARSEDIVDGNLKFDQTNKKNPRLSTASGKVVSVTKVSLEETSTFFREFDNQNTATDNQLLLRDSSKHYPQHKDRQTKATLHPKAARNEPAHLDLHSLDFNSCTDTQQIYFEQEAMACTKALLEDDDLIESAGLISSEDIDNKRRPSFSDVQTIESVDQNRKRKRQVDGSSVADSGQPPLKRQLLSEFDRTLHAKTSGLTPLKSCPNGTLKDRRVFKYNVHLKPYVTSPVLFPVNQQSNNIEEHCSTESVQKRCNSDHMGGVFNPPFQKNMNPPTSNSQDASKVSSGIVLSFNVVNQEENPNSKEMDQIMAISKSHCDRGKQNCNEKNQDSKSKSSSSVQSIPLKIGNFDEKDMIALQESLQLARDMQDMRLRKKKRQTIRPVPGSLYLAKTSGVSRKSLRDAVGCTCPSQYTQDELSQHGVHHKVLEITSENAESFRFDCSDYFTCEHLMESGALQLADGGWLVPDSKGTVGKEEFFSALCDTPGVDPKLISDVWVFNHYRWIIWKRASMERTFPNLIGGLCLTPEQVLLQLKFRYDVEVDHSQRSALRRIMERDDTPAKTLVLCVCGIVQTCQNPEKTMKDDKSPSAKMESCVIWLTDGWYSIKSLLDPPLSAMLNKGRLKIGDKIVTSGAELVGSQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDPRPIRLLLSSLYASGGLVSCVNLLVLRSYPTQWMEKKPNSVFIFRNDRAEDREARKHSNSKHKSLDLLISKIQTQFEKEMEGKKKKRAQRRTFSRHEIETLQDGDELYEAMEQDAAVETRLSHKQMEAVSKYRCCREEKRQAELQERVQKAVMEAQEAEGGCPNRDVTPVWKLSVIDASDMQSNCVYTLNIWRPTRELQGLLTEGHRYRAYHLASSEGKKRSGVAHIQLTATKKTLFQDIEVSPEWLHQHFRARECVRFRELQNPHFSSPCGEVDIVGYIVSIEGKQGHCPVLHLVDENFDLVTVRTYSSLEQLAVEELVKPRALVAICNLQVRVLSGPVPSLYAGEQALFSINPKESYLQEAMAHLKTFAQNYEQFFNLAEEKVSDVVPSGVLGSFQSPRTPGVQPFPKMNGTVTPQQKSSIFSPFTPLNRRTPASTSNSEVKDSKNLKRRRGLDYLSRIPSPPPLIPLKTRASPCINKTFNPPRKSVTPKPPQNECSPASRPPAGEEKWVHDEELAMIDTQALVDGLMND</mol_seq> | 58 <mol_seq is_aligned="0">MFENFFHQIDRELGPLNPDWFEELNERASRDEGSAESSKAGENESIKAPETSALASQLFSTPRIFKQRHFPQSPDSIPNEKSQNEGANGELSAFPWTESSPCLFGSAKDSPKFDRSSEKPRDCFGLLDTPKRSLARSAKQISESLGAQINPDLSWTSSFNTPPSMTPTVILPTTEDRVASASILKDKESIFVRKLFPSLSKDSENATTLKQDVVTKSESIEADDLGEKTVCSPNESLDISSLWKQRVPNAIEDGDVRNTVQNVLDGAEDVLSIFFSNNTSALRKIKSKERIRKRITNSSEDVKSVFLTSEPEQKLKADTETKSPSKNDDSIEWTPLSLSETILTEGCSSTSLVDNNNTVAPSETNDGAIFKFTSESSQTCPQSVRLESSPEGTQCQKILLDKSSAFMLNKKPRKFVYQVSSSEMSTTLTGSKADLPKCLDQTLKEGPSVEELSVCLNKSSFTNENPIGDQTQPQAVEQLSSEHLDHGLDMTQLSKAFAEEFTQEIMAGGLLDMPVQSNQKVQVQPKAEPESKNKDGNHTDISNLADISVNSPNKSTSITTFEISHDSGCPTTFSDLDRTTASFADIGEYFPTFKTANNKFICIPTEAIVKAKASLDEAAGDGLAKTSNQTKPKHFHVTETMCKSVSRSIPAPRPPVGQSIPSNHASGVSVSDASKTDSPKGFKMNFSNCSLPQSDESDCKTSSKTIITVSDAGLQTESLLKEKLGRSSESSKPIHQKVDFERSAERHAVFDISSTQKPTAVDSSCDDLEENGTLTASQKADVTELCSLLEEANSQYEFTQYKSTNIGSHNRTTEKEWDPDILNDIDFDDSFSCDVVKGKHPSKTNASSVNTSDLISFRSDLKEKQNGTVVLSVTEESALVDGMRSILSKSSDNSHFHTFGFKTAKGKAISVSEKSLNKAKHFFEEDYKEATFTGVINQEHFKTESSVKTCISTENNNAQTKQDVRLSCGEVNAAHNMINWQEAGNAGTEPNCLRDKTDVVCVDSNIHFGFSTARGAKLKVSEKALEQARMFLNDVDSIGESQTPKLVPRSSGKHDVSMQSTRLQKTKDLCRGETSIKISQPDSGVANQISNGADITTFNSENVFQEQKSGNAAKEVCEKISPSETSMPQPQQGYGFQTASGKGVSVLPSALKKAKAIFKDCDSNIDNLQSTNMEERKTKLDVEIVKQTNALISNSKSVTFSDVEEFKTDLINNLDQEAPQKEVCELKGLQSEFSNLISSNGNCGFSTASGKKVSVSAEALQRAKDVLFESVDGFSCANVYKKTNQVVDIQLDSSSSGKHKGFCTAGGKKVAFSATGLQKAKNLFRGCEEESLTTEQNCKGLSNVLMLACNGVSLIPEPGNSSGNNVGFSTAGGRKMDISVTALQKANNLFKDCEEESLASRSLAHQGFTTASGKNVFVSEKALSEVRAVFAGCDETSFSLELKKLSVNNVGFSTAGGKKVTISDTSLQRTMNLFQDCEEESLGSRSLKHQGCKGFTTASGKNVTVSEKALSEVRAVFAGCDEASFSHEPKNISGNKIGFSTTVEKMTTALEMPNNNNNFKDCEEESLASRNLMHQACKGFTTASGKNVTVSETALNEVKAVFAGCDEATFDLEPKKSLGSNIGFSTAGGKKVTISSTALQRAQTLFKDCEEEKEVFESEKAPLPTKSFHARSEDIVDGNLKFDQTNKKNPRLSTASGKVVSVTKVSLEETSTFFREFDNQNTATDNQLLLRDSSKHYPQHKDRQTKATLHPKAARNEPAHLDLHSLDFNSCTDTQQIYFEQEAMACTKALLEDDDLIESAGLISSEDIDNKRRPSFSDVQTIESVDQNRKRKRQVDGSSVADSGQPPLKRQLLSEFDRTLHAKTSGLTPLKSCPNGTLKDRRVFKYNVHLKPYVTSPVLFPVNQQSNNIEEHCSTESVQKRCNSDHMGGVFNPPFQKNMNPPTSNSQDASKVSSGIVLSFNVVNQEENPNSKEMDQIMAISKSHCDRGKQNCNEKNQDSKSKSSSSVQSIPLKIGNFDEKDMIALQESLQLARDMQDMRLRKKKRQTIRPVPGSLYLAKTSGVSRKSLRDAVGCTCPSQYTQDELSQHGVHHKVLEITSENAESFRFDCSDYFTCEHLMESGALQLADGGWLVPDSKGTVGKEEFFSALCDTPGVDPKLISDVWVFNHYRWIIWKRASMERTFPNLIGGLCLTPEQVLLQLKFRYDVEVDHSQRSALRRIMERDDTPAKTLVLCVCGIVQTCQNPEKTMKDDKSPSAKMESCVIWLTDGWYSIKSLLDPPLSAMLNKGRLKIGDKIVTSGAELVGSQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDPRPIRLLLSSLYASGGLVSCVNLLVLRSYPTQWMEKKPNSVFIFRNDRAEDREARKHSNSKHKSLDLLISKIQTQFEKEMEGKKKKRAQRRTFSRHEIETLQDGDELYEAMEQDAAVETRLSHKQMEAVSKYRCCREEKRQAELQERVQKAVMEAQEAEGGCPNRDVTPVWKLSVIDASDMQSNCVYTLNIWRPTRELQGLLTEGHRYRAYHLASSEGKKRSGVAHIQLTATKKTLFQDIEVSPEWLHQHFRARECVRFRELQNPHFSSPCGEVDIVGYIVSIEGKQGHCPVLHLVDENFDLVTVRTYSSLEQLAVEELVKPRALVAICNLQVRVLSGPVPSLYAGEQALFSINPKESYLQEAMAHLKTFAQNYEQFFNLAEEKVSDVVPSGVLGSFQSPRTPGVQPFPKMNGTVTPQQKSSIFSPFTPLNRRTPASTSNSEVKDSKNLKRRRGLDYLSRIPSPPPLIPLKTRASPCINKTFNPPRKSVTPKPPQNECSPASRPPAGEEKWVHDEELAMIDTQALVDGLMND</mol_seq> |
178 </sequence> | 59 </sequence> |
179 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">danio_rerio</property> | 60 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">danio_rerio</property> |
180 </clade> | 61 </clade> |
181 <clade branch_length="0.462514"> | 62 </clade> |
182 <name>ENSAMXG00000013027</name> | 63 <clade branch_length="0.124852"> |
64 <confidence type="bootstrap">13</confidence> | |
65 <taxonomy> | |
66 <scientific_name>Acanthomorphata</scientific_name> | |
67 <id>123368</id> | |
68 <common_name>Teleost fishes</common_name> | |
69 </taxonomy> | |
70 <clade branch_length="0.381933"> | |
71 <name>ENSGMOG00000009699</name> | |
183 <taxonomy> | 72 <taxonomy> |
184 <id>7994</id> | 73 <id>8049</id> |
185 <scientific_name>Astyanax mexicanus</scientific_name> | 74 <scientific_name>Gadus morhua</scientific_name> |
75 <common_name>Cod</common_name> | |
186 </taxonomy> | 76 </taxonomy> |
187 <sequence> | 77 <sequence> |
188 <accession source="Ensembl">ENSAMXP00000013440</accession> | 78 <accession source="Ensembl">ENSGMOP00000010385</accession> |
189 <name>brca2-201</name> | 79 <location>GeneScaffold_2233:16156-29802</location> |
190 <location>KB882257.1:1212119-1232402</location> | 80 <mol_seq is_aligned="0">LARDLQDMRLRKKKRQTVRPLPGSLFLAKASGGARIPLRAALRQLYQHGVHQPVWTVTAENAESFRLSFRRFFRWGSSVSRGVQLADGGWLVPRDDWTLGKEEFYRALCDSPGVDVKLLSQEWAYNHYRWVVWKLASMERSFPLTMASLWLNPEQILLQLKYRYDVEVDHSRRPALRKITERDDAAAKTLVLCVCGVVPGADQQPQGSHAPPPGVVWLTDGWYAIKAQLDAPLTAMLRRGGAGGKLVVYGAELVGSQDGCSPLEAPEGLMLKIGANSCRRARWDAKLGFQRDPRPFLLRLSSLFSTGGAVGCVDLLILRSYPVLWMEKKQDGVFVFRSGRAEEREARRFDDHNNKTMEALYAKIQADIQREDKGSARERNSGEELYEAFENDPAYLEACLNDQQLEVLQSYRRSVLEKRQAGLQERCRRALEQAQESQGGCPRRDVTPVWKLCVVDARAPPGYMLNVWRPPADLQAQLKEGARYRVYNLSVTAGKKRNPGASVQLTATSKTHFQEVQVGQDWLSDHFQARQAVHFQELQRPEVQSACGEVDLVGYVVTTADTHGTSPVVYLVDGDLNLVKVRCFSSLLQWGLEELVKPATLLALSNLQLSARRATTLPVLYASDLTAFSSNPREAHLQSSHSNADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRALDYLSRMPSPPPLGPLGSLASPACVKKTFNPPRRSTTPAAVATTRQTPAHGPRVGPWQEEEWENDEGLAQIDTQVL</mol_seq> |
191 <mol_seq is_aligned="0">MIEDFFHQIETEELGPLSSDWFKELTAKASKDESFPGAVEHEASSRTEDGTFRAPQETPALESQMSSTPRLFRVRGPLSPDSVLGRSPNPAFQQQGMQTPLSTLPWTDSSPCLFGSAKESQRFEEDSEPLKKHDYFGLLDTPKSSLVQDSSAKRISESLGAQLHPDLSWSSNFNTPGAMSPTVILTKKDAQPSPVSFLKDKEVIIVRKLFPSLSKGTESTSEITSTAHNNASLTEENAQTKGPDESFDNVEGLWRQTVPDAINDSDVRDTVESVLDGAEDVLSIFFSNSSSALRRVKSKERTKKRVNGVSKDVKPAALATQHYTDRTGTATEAKSPPKNKDFSQWSPLSLSQVSDAKAKQDCTSDLANKHLNFESVNSDSGEDALKDSITQLGQFNTCEVEKQKSSPDSYPEKSQLRSSLLAASPALTFSRKPRKFVYQVQSPFPPTKENDLTGKHYREPFLTAENKKHIKDDPQTSDTVGDCLVHPKEPPVKQGNPGALNVDHGLDMTQLCNAFAEDFTQEIRSDAIKIDEVQTKAESVLHSDDGAEHLEFPANHKEASALAEESINLTSRSRMENTLSESLKHENGYPAVFNDVSGLSSSCNDGADKYLYSGFKTANNKLIHVPPEAVMKAKATFEDFVDLEEIRSDGLNTGSGTALNSSVVSTWSSERYSHALNKPEREPTGNLLHGSLDVASGCTSTSYLPKTNDSGFKTASNRSITISSVNLEKAKDIFKELEVENLYKTDICPSSNSAELEIQVMKNAKVPKLDIKRNVDGNYVLTASQKADVTELCSMLEDADSQYEFTQFRQAKPCSKSMESSRSEREWDPEILSGIDFDDSFNCDTERQLPRKWPVRPDLPTQNGPVSNSMKNGKETPKAELSLNDYRLSLRSDGREMAKTPAVQTNTSEGNEPVCVGFKTARGNSVRISEKNLTKARSLFADLEDCVGKIGLKSDHNSVTAQVTTKQTKHNQNSHNKDDVCKQICSTENPEDQDNPQGTKQNEKPDLLVDTRHCGFSTAGGKELKVSESSLLKAKKLLNKVSDQCEAVPSIKAPPNRVTTLKVANINLQPSVCSNSKVSENVFPHNLKMSCKSLTGNSKDQMFRNSESHHRLSEIEQQTTAKYQSTKSIQSSGFKMASGKGVSFSSSAIEKSRAIFRDLDSLIAEDGSNETKSMDENAKLHDEAERSQCKFANGFKMASGKGVSFSEGAFLKSKAFFKDCDADYPDHSQGKGDQSSVMDNCGFKALVGNTVHLPEIDSPNKEIVGLKDEATVLNKYVEKEFVPTSAPEILQFTSGCGFSTASGKMVSVSAEALQKAKAVLDDSSAASPCEIKADVSEEKNKKGVPKTDTYIPGRSLGFSTASGRKVAISDRALEKAKNLFASCEVEDLANNGITLNSAQTKPLGSEQTRCLGFSTASGKGVAVSEKTLKEAKAVFAGCEDILETADVHKPLKTGRVVEEKDKGSLNQSLTNREFQTCESANFRLSSGKCEEINNANKSNVKVEQFGFSTASGKGVSVSKSALKVAFEMFRDCDVQPITEEQHPVAQIDCPSSSDETRRHTTDTTTLSLSTQAIRDDSSLLNSHALSLNGCTMTQQKYLEQEAMACTKALLEDDFNEHSRSEPVEETVIRKCPTLAEQRSYEVIIGERKRTSDADLTGKALSNSSQPPLKRRLISEFDQISDGTRVCVPVKSSPNGTLTDRRVFKGNVHLKPNITHPSSIGSVSKKSKNIMDQNASKALDGEKRRPSNPKAVIFIPPFQKNIKPTRKVPTNYVSRDNAKVPTMFIPPVKKNPMSNVLQGNSIQSCTDSDCEKLEKEDTLEVKPNTAGNHDSEPEKKEKEVEEDQYGSFEESLELARDMQDMRIRKKKRQTIRPLPGSIYLAKTSGVTRISLREAVNNKCPLLHSQEKLYQYGVHCQVSQITAENAELFRFNFDDFFKREMFIDNTGVQLADGGWLIPDNRGTVGKEEFYKAMCDTPGVDPKLMSEAWVFNHYRWVVWKRACMERTFPEVMGGRCLTPEQVLLQLKLRYDTEVDNSRRSALKKIMERDDTPAKTLVLAVCGFAKSSSSPVNSEKAVGTPDSKTSESTAAIIWLTDGWYSIKALLDPPLSSMLQKGRLSIGGKVMIHGAELIGSQDACLPLEAPDSLMLKISANSTRRARWDSKLGFYKDPRPFSLPLSSLYSNGGVVGCVDVIVLRSYPTQWMEKRTGGVFVFRNERAEDREARRHSSAKQKTMELLFTRIQAQFEKEEEEKKKTRRRKRFRRCDIHSMQDGEELYEAMENDPAYVEAHLSAQQMEAVSSYRRVMADRRQVQLQERMQKSVQEAQESEGLCPNRDVTPVWKLTIADFSDLHSNCTYTLNIWRPSLELRSLLKEGCRYKAYYLSTSETKKRSGTANVQFTATKKTQFQDIEVCPEWLMANFPARQFTIFRDLQNSAFSSPCGEVDVVGYGISILDRQGASPVLYLVDDKFDFVSVRSFSSLVQLALENLVKPLTLLAISNLQLRELSGPVPRLYAGEQALFSVNPKEAHLQEAMAHLKTFVQSYENFFSVAEEKLSNLLPSGSVKPAQSPRTLGVSSVPKLNSRINVTPQPPKVHSPFTPVSRRAPTPTDQTTEPKDPKSLKRKRGIDFLSRVPSPPPLNPLNILTSPNVKKTFNPPRRSETNRPARRDPAPSRRSASLAPSVEEQWVNDEELAMINTQTLLD</mol_seq> | |
192 </sequence> | 81 </sequence> |
193 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">astyanax_mexicanus</property> | 82 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gadus_morhua</property> |
83 </clade> | |
84 <clade branch_length="0.18545"> | |
85 <taxonomy> | |
86 <scientific_name>Percomorphaceae</scientific_name> | |
87 <id>1489872</id> | |
88 <common_name>Teleost fishes</common_name> | |
89 </taxonomy> | |
90 <clade branch_length="0.048599"> | |
91 <confidence type="bootstrap">1</confidence> | |
92 <taxonomy> | |
93 <scientific_name>Ovalentaria</scientific_name> | |
94 <id>1489908</id> | |
95 <common_name>Teleost fishes</common_name> | |
96 </taxonomy> | |
97 <clade branch_length="0.307016"> | |
98 <confidence type="bootstrap">100</confidence> | |
99 <taxonomy> | |
100 <scientific_name>Poeciliinae</scientific_name> | |
101 <id>586240</id> | |
102 <common_name>Live-bearing aquarium fishes</common_name> | |
103 </taxonomy> | |
104 <clade branch_length="0.042514"> | |
105 <name>ENSXMAG00000006974</name> | |
106 <taxonomy> | |
107 <id>8083</id> | |
108 <scientific_name>Xiphophorus maculatus</scientific_name> | |
109 <common_name>Platyfish</common_name> | |
110 </taxonomy> | |
111 <sequence> | |
112 <accession source="Ensembl">ENSXMAP00000006983</accession> | |
113 <location>JH556673.1:699224-714770</location> | |
114 <mol_seq is_aligned="0">MDSCIQNMYDAFKDEIWKELGPLDPNWFEVLTAQASLNEGNVADNDELCANQEGYFKVPLEKTAVESQLFSTPKVFRHCQIVSPDTEDDTSFTAAQEKEMLPWMPTQSPCLFQPPKLCVSNLKCEGVQPQTEASFDLLHSPEKSPASYANHISESLGAQINPDISWTSSFNTPRALPSTLILSKTDESPCPESVTADRKVVFVRKLFPSLSNSSLNTSRTSLGPVFPVTDTCSKSPLNQSESHQQQKVPDALEGDVCSADAPRSFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDTSKSDNAASSEEDLESGGLPSTTLVKTGDTAISQWSPLSLSEISSSAVGSNMTLPGYTDSVQPTRPTLKITDSGFTQKKRKFVYTITTTKSQACGQDFQTTDPSLKISESEQENGKPFVNTPDKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFAQDFSQMTDLKTGENTQRNFSPAACLSAMKQTKQNGKPANFPNDYSCISKNRCIPTSNQPFSISEVTMIDSGFQSGVADVTHMTSSSFGLPLLENVGQNQPKQSFKTGMHNFPSTNGSGKPKFDVEVPVQRSGTGQAPDHAKEIELHIASISTEELWDREETVGESKSSQPQTTPVSLLPADASGFKTASNKGIHISHANLEKAKRFFEATEDKKSSLDNSTKSYHGIIYKSNSICEKTTDTSSDSSLPACAGKSFGNVSSQLTASEKADVTELCSLLEEADSQFEFTQFKSTKKLPNHQDNHNPPQKEDKDLDPALADIDFDDSFSSEGGKHSTVMMNDKVASVLENRTHGETAKAINRCTGMSDLLKTETHLNSLSGTISEEREFLKLDEPNILPRAEDTETRYLENNKALIHSEAFRTAGGNVLHVSKKCLNKAKALFADLERNLTDQKLSDKQNGKNAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKLEGVVCSNKNVGNRNDTKSVKNNEIDTIICENGFRKASGKGISISANYMQEADAFFKDCHVMEHKEGKKSFSNFKSPQVSISKKSVTRCTELENVNTAMVSHHTKERRLNEVERNSKFTAALKNEDGKSFPTSKPFAMLHPSKSTDLSAFEELCAGDGFCTAAGKNISVSAAAMKKDESLLNQIHAPEEINKETNEKENASKTKCLGDELSNLDAGGFQVVNGKKFAISSAPLKKATLLRESDKSEDAICISSQQSSPKTPVIPVTNLWSGGFSAASGKPVVLSSVALEKTQTLVSDISLNMDKVAESAPVKKDKKHQTEPEKICSGFTTAGGANDQMSQEKFDDLILAKAVQEEDALSTDGVLESNNVMLESVGSKKEDEKPHADQRFRTHTPVEAVKGCFKDADKQEKHKENLLPQASCGFKTASGKKVEVSFEALKKAENLLGDCVGVMDRVNAALPESKAIDLPVRNDGFQSASGKPVALSSEALQKAKSLFSDIGFRAEDPDTSQMRKSGKNQDGSNNTEKMSCGFTTARGEKVDVLQKNLQKAKALFKELDDQVLSKAAQEEDAFFAGCDMDINKEMLENDLKDKVHMQRSRKASLAKCYTDDEMRVSISIPECSSNANKQVEQRENILPQASRGFQTASGKRVDVSSEALKKAETLFSEFEGIQDKTNAMSSQSQSSALSLRNCGFHSASGKPMASSTEAVQKAKSLFCDITSSMEDSDFSQTVKADGKQDSRSKTQKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLALTKAMQDTDPFFNQEEGWTMDSNSEKSSEQTNTAPVNESGSIKGNMSELRTNTGSICEEPESGSIKAKQNEGGFQTASGKTVAVSAEALSRAKLLLSENKVDEESTCVCATSGKPFSHEALQKAKTYFSSGVESLPSAADSRSDDHIEEKSHLSICNLNTKSCNQRSDIIQTNKSSDPKFQLLNLTGCTETQQKFLAQEALDCTKALLEDEVLVGQSLLTTSEDLQLLDDQHLNKKSAEEDKGRKRRRAEDLIAQPPSKRRLLEEFDRTAENSRGSGLHPVKSGPNGIMDRGVFRCGAFLHPNITKPNRDAKSFVHTRLQRTIQMPHSDQGDGRSVACRMPTFVPPFFKNSKRDALNKPEARDCKKVPAFVPPFKKQRVVHEESSPKQQEDNKQHHSLCLETNSKTDAPLTKTTQNCEEVVTLVNTPNTKMINQSVPLKVGSVSSTEMLHVDDKLSRSQDRTENIGLARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVARIPLKVAVNGNIPSRYSAQELYECGVHKYVPEITGENAESFRFNLLQFVKQEMLADGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTAGVDPKLISEQWVYNHYRWIVWKQASMEKSFPETMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTPAKTLVLCVCEIISKGQLLHAQICSDTKMSQSAKTKVETPVAVVRLTDGWYAIKAQLDEPLTAMLHKGQLAVGGKLIIHGAQLMGPQDGCSPLEAPDSLMLKIWSNSTRRARWDAKLGFHTDPRPFLLPVSCLYSNGGPIGCVDIVILRSYPMQWMERKSDGGVVFRSARAEEKEARRFNSHKQKAVELLFAKVQAEFEKEEEGSIKCQRRRQMVGKQDIGNLQEGEDLYEALGDDPAYLEAHLSEQQLESLQAYRRSLMEKKQAELQDRYWRALDAEDNEMSCPKRDVTPVWRLCIADSRIQSSCVVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKPSNVETVQLTGTKKTQFQELQVSQEWVSSHFRQRISTDFVNLQNEEFKPLCGEVDLTGLVISVVDQQGSSPAFYLVDGKKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVLYAGDLTVFSTNPKEIHLQESLDQLRNVVQGQDNFFLTAEEKLAHSIKSDGSCSSSLQPEMPVAARRQDSKTNVAFLKPIKSLGSFTPVSSNLPAATSSIEKDPKSLKRKRALDYLCRIPSPPPIFPLASVVSPCVKKTFNPPRRSGPPSTLKPATIKATDSLVEDEWVNDEELAMIDTQALHVGNLF</mol_seq> | |
115 </sequence> | |
116 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">xiphophorus_maculatus</property> | |
117 </clade> | |
118 <clade branch_length="0.046413"> | |
119 <name>ENSPFOG00000001640</name> | |
120 <taxonomy> | |
121 <id>48698</id> | |
122 <scientific_name>Poecilia formosa</scientific_name> | |
123 <common_name>Amazon molly</common_name> | |
124 </taxonomy> | |
125 <sequence> | |
126 <accession source="Ensembl">ENSPFOP00000001575</accession> | |
127 <location>KI519684.1:85746-101164</location> | |
128 <mol_seq is_aligned="0">MDSCIKNMYDAFKGEIWKELGPLDPNWFELLTAQASLKEGSVADNDELCANQEGHFKAPLEKTATESQLFSTPKVFRHSRIVSPDTEDDPSFTAAQEKETLPWMPTQSPCLFQVPKHCVSNLKCEGVQPQSEESFDLLDSPEKSPATYANHISESLGAQINPDISWTSSLNTPPALPSTLILSKTDESPCPVSVTADRNVVFVRKLFPSLSNSSLKTSRTCQGPVFPVTETCSESPLNQSESHQQQKVADALEGEVCIADAPKTFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDASKSDSAASNEEATADLDSGGLPPTPLVKTGDTAISQWSSLSLSEISSSAVGSNMTLPGDTDSVQPTRPTSKITDSGFTQKKRKFVYTITTTKSQACGQDFELQTADLSLKISESEQENGKSFVNIPDKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFALDFSQMTDLKTAENTQRNFSPAACLSVMKQAKQNGKPANFPNDYSCISKNRRIPTSNQPCSISEVTMMDSGFQSGVVDVTHMTSSSFGLPLLENVGQNRPTLSFKTGMHNFPSANGSGKSKFDVEVPVQRSGTGQAPEHGKEIELHMASISTEELWDKEETVGQSKCSQPQKTPLSLLPAEASGFKTASNKGIHISLANLEKAKLFLEATEDKKSSLDNSTKSYHGIIYKTNSIRETTTDASSNTNPPACAGKSFGNVSSQLTASEKADVTELCALLEEADSQFEFTQFRSGKKLPNHQDNHNPPHKEDKDLDPALLADIDFDDSFSSEGGKQSTVMMNDKVASVLENRTHGEKAKAINQCTGMSDLLKRETPLILPGAEDTEARCLENNKALIHSEAFRTAGGNVLHVSTKCLNKAKALFGDLERNLTDQKPSNQNGENAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKLEGVVCSNNNVGNRNDTKSGKNNGIDTIICENGFRKASGKGISISANYMQEADVFFKDCHVMEHKEGKKSFSNFKSPQVSISKKSVTGCTKLENVNTAVVSHHIKGLHLNEVERNTKFTAALKNEDGKSFPTSKPFAMLHPSKSTDSSAFEELCTGDGFCTAAGKNISVSSAAMKKAEFLLNQIHAPEEINKETNEKEKASKTKCLGDKISNVDTGGFQAVDGKKFAISSAPLKKATLLRESEKSEDEMCISSQQPSPKIPVIPVTNLWSGGFSAASGKPVILSSVALEKAQTLFSDISLNMVKVAESAPFKKDKKHQTEPENICSGFTTAGGANDQMSQEKFDDLVLAKAVQEEEALSADGVLESNNVMWESAGSKKEDETPYADQRFRTNTPVEAVKGCFRDTDKQEKHKENLLPQASCGFKTASGKKVEVSSEALKKAENLLGDCVGVMDTVNAALPESKAIDLPVRNDGFRSASGKPVALSSEALQKAKSLFSDIGFGAEDPDASQMIKSGKNQGGSNNTEKMSCGFTTARGEKVDVLQKNLQKAKVLFKELDDQVLSKAAQEEDAFFAGHDMDINKEMLENDLKGKVHMQRSRKACLAKCYTDDEKRVSISIPECSRDANKQVEQRENILLQASCGFQTASGKRVDVSSEARKKAETLFSEFEEIQDKTNAMSSQSKPSALSLRNCGFHSASGKPMAPSTEAVQKAKSLFGDITFSTEDSDFSQTVKAYGKQDSRSKTEKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLDLTKAMQDADHFFNQEEGWSIESNSEKSSEKTNTAPVNESGSIKGNMSKLRTNTGSICEEPGNGSIKAKQNDSGFQTASGKTVAVSAEALSRAKFLLSENKADEESTCVFAASGKPFSHEALQKAKTSTGGKSLPSGADSQSDDHIEEKSHFSICNLNTKSSNQISDNMQKNKSSDPKFQSLNLAGCTETQHKFLAQEALDCTKALLEDEVLVGQSLLTTSENLQLLDYQQLSEKSAEEDKGRKRRSAEDLTAQPPSKRRLLEEFDRTANNPRGSGLHPVKSGPNGIMDRGVFRYGVFLHPNITKPNRDAKSFVDTRLQNTIQMPHSEQGDGRSAACRMPTFVPPFFKNAKRDALNKPEARDRKKVPAFVPPFKKQRVVQQESSPTQQEDNKQHHSLCLETNSKTDAPLTKTTQSCEEVVTLVNTSNTKTINQSVLKVGSVSSTEMLHVDDKLSGSQDRTENIGLARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVARIPLKAAVNGNIPGRYSAQELYECGVHKHVPEITSQNAESFRFNLLQFVKQETLAEGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTCGVDPKLVSEQWVYNHYRWIVWKQASMEKSFPGTMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTPAKTLVLCICEIISKCQLLHAQSCSDTKMSQSAETKVETPVAFVRLTDGWYAIKAQLDEPLTAMLHKGRLAVGGKLIIHGAQLMGSQDGCSPLEAPDSLMLKICANSTRRARWDAKMGFHTDPRPFLLPISSLYSNGGAVGCVDIFILRSYPMQWMERKSDGGVVFRSVRAEEKEARRFNSHKQKAVELLFAKVQAEFEKEEEGSIKRQRRRQTVGKQDIGNLQEGEDLYEAVGDDPAYLEAHLSEQQLETLQAYRRSLMEKKQAELQDRYRRALDAEDNEMSCPKRDATPVWRLCVADSMTQSSCVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKRSSVETVQLTGTKKTQFQELQVSQEWVSSHFRQRISTDFVDLQNEEFKPLCGEVDLTGLVISVVDQQGPSPAFYLVDGKKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVVYAGDLTVFSTNPKEIHLQESLDQLKNVVQGQDHFFLTAEEKLAHLIKSDGSCSSSLQPQTPVAARRQDSKTNVAFLKPIKSLGSFTPVSSNLPAATSSTEKDPKTLKRKRALDYLSRVPSPPPISPLGSVVSPCVNKTFNPPRRSGPPSTLKPVQPAAPKATDSVVEDEWVNDEELAMIDTQALHVGNLF</mol_seq> | |
129 </sequence> | |
130 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">poecilia_formosa</property> | |
131 </clade> | |
132 </clade> | |
133 <clade branch_length="0.279908"> | |
134 <name>ENSONIG00000005522</name> | |
135 <taxonomy> | |
136 <id>8128</id> | |
137 <scientific_name>Oreochromis niloticus</scientific_name> | |
138 <common_name>Tilapia</common_name> | |
139 </taxonomy> | |
140 <sequence> | |
141 <accession source="Ensembl">ENSONIP00000006940</accession> | |
142 <location>GL831218.1:289993-303706</location> | |
143 <mol_seq is_aligned="0">MYETFKDEIWKELGPLDHNWFDILTAQTSANEGGSGSDQDELCANQEGHFKTPLDKTAVDSQLFSTPRVFRHSRIVSPEIEDGQSFSTTQENDTSPWTETQSPYLFQMSKKGVSDTKYEEIQPQSQDSFDPLDTPHKSPMSYAKHISESLGAQINPDISWTSSLNTPPPVPSTLILSKVDESPCPVSVSVDKSVVFVRKLFPSLSNPSRIVVAPPKNALSSTDAVLPEVVSSQTLLTQNEGIWQQTLRGANGDGKICSTVASAPDEFQNASSTFLANSSSALRKVKPDRIRWKQFKLSEHDCSSTDISKTNQSNEEHKADEEHSTIPSSPLAKNGSTAISQWSPLNLSEIPPCTAENNILTELQPDFDPRQLVRPPIKITDTGFIRKKRKFVYTVETLKPKVKENETDFQKMNASSGIPDTVKIEVFLFSTVTEKFSSFLLGPELSSKQSEDAPDEASCCSNERNAEEKQEKSTLENLPSSVQEKVQDLDMSQLHKDFAQDFSQISDSGRRTEGVAEDQNHFSPSACLLAMKKAKHQTKQASLHHDYNSISNTGHMSTTNQNYSTNEGTISDSGFQSAVADITHTASSCIVPCSENTGSKTDIHRTTPFPSTHRGNEKSQLKERQTIDSERECQLDMESTLTQLPSSLKGTDDGLNWIPQNGQVHGRLLEKTGVSLPPAHASGFKTASNKGIQISLANLEKARNLFEERDGDQPTKCNSATKHKNSQSNGSMKSTVSVSNQQTSVSERFEGISCHLTASQKADVTELCTLLEEADSQFEFTQFRGAEVKQPCQKTDKDLDPDFLADIDFDDSFSSDAEKHFAITAMPDKMTRENISAGDVLSSSENIPGRSNWLISTKQKSLHRAEHGEASKMEKPNPLMLSVAFKTAGGNALRVSKTCLSKARALFADLEINVSDLNRSHKQAAETGAKSKKMCNVDSETATDTKQPVSALKQARNMQDKDTTKSFEICKKDAIVNIEFENVNSGLSRPHPDDIEMKSVGCNTVLEFKNPVSFHETPFSTSKLLPCPASKSIDSSAISELSSGYGFCTASGKTVSVSADAMKKAKCLLNDTYTLEDTSKKISQKENALRTAQLTAQNKESIPKTSGFDTATGKGVSISSTAHKKAKCPLSESDKDFEDSVLTNAMQETVDCDIDVNNGGNIVHISGSDSDLGIRPDQRVTSNISVESANKQVKQKDSLPLKSGGFGPVSGKGVSISSEALNRATSLLGQCDEVNNKINVNQSHLKTSVYSPLPTSGGFHAASGKALTLSSEALQKAKTLFSDCREPSCSTHTEHKKLCKVWKWMRSGKPSCSKTPVPENGGFLAASGKPVALSSEALQKAKTLFSDIISSAESPHAKNEMQSGFKTASGKKVHVSQKDLLNAKHLLKDLDDSVFTKAMQMAEDCDMDLQTASGKGVTIASEALRKARSLLGECDEVEDKIVHDSLPQNGGFCAASGKPVALSSEALERAKALFGDIGISAEIPHAKNSHKKYDYGENTWKMQCSSKTVGEKDSGNGCTEVTNEHMKQKNTWPQQSVGFQTASGKGVAVSSEALKRAKTLLSECEGVEDKISITAPQGKISAHGPPFRSSGFLAAGVKPVALSSEAMQKAKALFSDISQSRDTPAVAHTRKNDKKIDAHNGEEMHCGFSTAGGVKVQVSKKSLLKATSLFKEFDDGECHDSLLFSTSPQDYEINKESSTKESKILKPNESSVLNFQSLNLTGCTETQQEFLAQEALDCTKALLEDEGLADHNLLMALENMPLQHNTSADGCQESEKRRGKRSVEETEMNGQPPLKRRLLEEFDRSLIDPKASTLHPVKSCSNGLMKDRGVFKYSTSLYPNITRPHRFQKTPQIQNSTMGDPRSKSAHYKTSAFVPPFVRNAKTETHKNMVLKDSIRTPSAFVPPFKKQRTIVQPTKKTQSDADGTAVAPAQSDDMNNQSLPVDFRSDSAGGETSGVDGTCSRSQADVYWNLQNTELAQDMQDMRIRKKKRQNIRPLPGSLYLKKTSGVPRIPLKAAVNGKIPGRYTPKKLYGYGVQKYVSDITSENAESFRFNLLQFIKREAFTDEGGVQLADGGWLVPSNDGTAGKEEFYRALCDTLGVDPKLISEAWVYNHYRWIVWKQASMEKSFPEIVGSRCLTPEQVLLQLKYRYDVEVDHSCRPALRKIMEKDDTAAKTLVLCVCEIISRGHSPKTQSHNDTKTPHSADAKVETSAALIWLTDGWYAIKAQLDEPLTAMVHKGRLAVGGKLIIHGAQLVGSQDACSPLEAPESLMLKICANSCRPARWDAKLGFHKDPRPFLLPISCLYSNGGPVGCVDIVVLRSYPMQWMERKPDGSVVFRSSRAEEKEARRYNSHKQKAMEILFAKIQSQFENEEKGNIKQQRRRKTISHQEIANLQDGEELYEAVGDDPAYLETHLSAQQLEALHTYRCSLMEKKQAELQDRYHRALEAEDNEMNCPKREVTPVWRLCIADSMELPGRVLVLVYQLNLWRPSSDLHSLLKEGCRFKVYNLTTSDGKKRSSIEAVQLTGTKKTQFQELQASHEWLSTYFQPRVCTNFVNLQNPDFEPLCGEIDLAGYVITVVDGKNTGSSPAFYLADEKLNFVKVRCFSSLSQTGLEDVVKPRVILALSNLQLRGQSMHPTPVVYAGDLTSFSTNPKEVHLQESFSQLKTLVQCQENFFLTAEEKLSELVRSNGLSSSSSPALQRQTPASLTDRRQDIKSSKPGRNLGSFTPVGRKSPTPTSSGEKDPKSLKRRRAQDYLSRIPSPPPLSHLGSVASPCVNKTFNPPRRSVTPSTLKTVQTPSHKPADSLGEDEWVNDEELAMIDTQALRVNLI</mol_seq> | |
144 </sequence> | |
145 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">oreochromis_niloticus</property> | |
146 </clade> | |
147 </clade> | |
148 <clade branch_length="0.023103"> | |
149 <confidence type="bootstrap">47</confidence> | |
150 <taxonomy> | |
151 <scientific_name>Eupercaria</scientific_name> | |
152 <id>1489922</id> | |
153 <common_name>Teleost fishes</common_name> | |
154 </taxonomy> | |
155 <clade branch_length="0.171796"> | |
156 <name>ENSGACG00000011490</name> | |
157 <taxonomy> | |
158 <id>69293</id> | |
159 <scientific_name>Gasterosteus aculeatus</scientific_name> | |
160 <common_name>Stickleback</common_name> | |
161 </taxonomy> | |
162 <sequence> | |
163 <accession source="Ensembl">ENSGACP00000015199</accession> | |
164 <location>groupI:13362884-13366744</location> | |
165 <mol_seq is_aligned="0">LPNVELAQDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVTRIPLKAALVFLLQLYRHGVHQHVCEISSETAESFRFNLKQFIKREALLDGGGVQLADGGWLIPSKDGTAGKEEFYRALCDTPGVDPKLISDGWVDNHYRWVVWKQASMERSFPETMGGLCLTPEQVLLQLKYRYDVEVDHSRRPALRRITERDDTAAKTLVLCVCGVVSRSFDDSKTPRGADAGGGNPSAVVWLTDGWYAIRAQLDEPLTAMLRNGRVAVGSKLIVHGAQLVGSQEACSPLEAPEALMLKICANSSRPVRWDAKLGFHKDPRPFLLPLSCLYSSGGQVGCVDMIVLRSYPIQWMERKPEGGVVFRSVRAEEKEAKRFNGLKQKAMEILFAKIQDEFEKEDKGRTCDFTTQAISRQAIAGLQAGEELCEAVGEDPAHLEALLSEQQVETLNTYRRCVMEKKQAQLHDRFQRALESAEASEGSCPKREVTPVWRLGVADSRDQRGRVYQLNLWRPSSDLQALLKEGRRYKVYNLTTSDGKKHNGSSNVQLTGTKKTQFQDLQASREWLSTRFQPRVSACFVDLQNPEFQSLCGEVDLTGFVIQIVDGQGFSPAFYLADGELNFVKVRCFSSFAQSGLEDLVKPRVLLSLSNLQLRGQSASPTPVVYAGDLTVFSANPKDAHLQESLSQNKNLRQSQENFFLIAEETLSRLVQSDGRRPLSSPALHTRTPALATSMIQDTTASVKCVLLMQGASQQLVRSRGTFTPVSRKPPAANCSTEKDAGSVKRRRALNYLSHIPSPPPLLNLGSVASPCVNKTFNPPRRSGTPSTLKTVQTPAHKAQKVDSLVEDEWVNDEELAMIDTQAL</mol_seq> | |
166 </sequence> | |
167 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gasterosteus_aculeatus</property> | |
168 </clade> | |
169 <clade branch_length="0.202291"> | |
170 <confidence type="bootstrap">100</confidence> | |
171 <taxonomy> | |
172 <scientific_name>Tetraodontidae</scientific_name> | |
173 <id>31031</id> | |
174 <common_name>Puffers</common_name> | |
175 </taxonomy> | |
176 <clade branch_length="0.114058"> | |
177 <name>ENSTNIG00000016261</name> | |
178 <taxonomy> | |
179 <id>99883</id> | |
180 <scientific_name>Tetraodon nigroviridis</scientific_name> | |
181 <common_name>Tetraodon</common_name> | |
182 </taxonomy> | |
183 <sequence> | |
184 <accession source="Ensembl">ENSTNIP00000002435</accession> | |
185 <location>16:4700614-4705074</location> | |
186 <mol_seq is_aligned="0">VSFSSDTPRKPKAGSLSSEFTDRFLAQEALDCTKALLEDERLVDDPHMTGECLHRCPQFSLLVNLFVKPHTAVLIPEQPPLKRRLLEEFDRTDGSSRGSALNPEKCSPNGIMGDRRVFKCSVSFQPNITTPHRICSQKAERPVSFLSRRSGTNYVETSLPNTTPTKVSALRDSNEARLQKSNFIPPFIKNVKLDTPNSKTASTFVPPFKKSRNSSKTEEEEPKHHFIPPFTNPCATSSTKKHTAGHLHNVELARDMQGMRIRKKKRQTILPLPGSLFLKKSSGVTRIPLKSAVNGKPPARYTPKQLYGLGVPLNVLEITSETAGSFRFSLQQFVKLESLTDKGGIQLADGGWLIPRNDGTAGKEEFYRALCDTTGVDPKLISEEWVYNHYRWIVWKQASMERSFPEQLGSLCLTPEQVLLQLKYRYDIEVDQSRRPALRKIMERDDTAAKTLILCVCGVVSRGSSPQKQGLGGVAAPSSDPQVENPFAVVWLTDGWYSIKAQLDGPLTSMLNRGRLPVGGKLIIHGAQLVGSQDACSPLEAPESIMLKIFANSSRRARWDAKLGFYRDPRPFLLPVSSLYNSGGPVGCVDIIILRSYPTLWMERKPEGGTVFRSGRAEEKEARRYNVHKEKAMEILFDKIQAEFEKEERDNRKPRSRRRTIGDQDIKSLQDGEELYEAVGDDPAYLEAHLTEQQAETLQNYKRLLIEKKQAELQDRYRRAVETAEDGTGSCPKRDVAPVWRLSIADFMEKPGSVYQLNIWRPPSELQSLLKEGCRYKVYNLTTTDSKKQGGNTTVQLSGTKKTQFEDLQASEELLSTYFQPRVSATFIDLQDPEFHSLCGEVDLTGYVISIIDGQGFSPAFYLTDGKQNFVKVRCFSSFAQSGLEDVIKPSVLLALSNLQLRGQATSPTPVLYAGDLTVFSTNPKEVHLQESFSQLKTLVQ</mol_seq> | |
187 </sequence> | |
188 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tetraodon_nigroviridis</property> | |
189 </clade> | |
190 <clade branch_length="0.069516"> | |
191 <name>ENSTRUG00000006177</name> | |
192 <taxonomy> | |
193 <id>31033</id> | |
194 <scientific_name>Takifugu rubripes</scientific_name> | |
195 <common_name>Fugu</common_name> | |
196 </taxonomy> | |
197 <sequence> | |
198 <accession source="Ensembl">ENSTRUP00000015030</accession> | |
199 <location>scaffold_19:196046-199577</location> | |
200 <mol_seq is_aligned="0">QLARDMQDMRIRKKKRQTIRPLPGSLFQKKSSGVARIPFKAAVNGKPPARYTAKPLCGLGVPLNVLEITSETAESFRFSLQHFVKLESLIDKGGIQLADGGWLIPTNDGTAGKEEFYRALCDTPGVDPKLMSEEWVYNHYRWIVWKQASMERSFPEEMGSLCLTPEQVLLQLKYRYDIEVDHSRRPALRKIMEKDDTAAKTLVLCVCGVVFRGSSPKNKSFGDISTPGADPKVENPCAVVWLTDGWYSIKAQLDGPLTSMLHRGRLPVGGKLIIHGAQLVGSENACSPLEAPVSLMLKICANSSRPARWDSKLGFHRDPRPFLLPVSSLYSSGGPVGCVDIIILRSYPILWMERKPEGGTVFRSGRAEEKEARRYNIHKEKAMEILFDKIKAEFEKEEKGNRKPQCRRTINGQNITSLQDGEELYEAVGDDPAFLEAHLTEKQVEVLQNYKRLVMEKQQAELQDRYRRAVESAEDGVGGCPKRDVAPVWRLCIADSMGHSGRVYQLSLWRPPSELQALLKEGCRYKVYNLTTLDSKKQGGNATVQLTATKKTQFEHLQGSEEWLSKHFQPRVATNFVRLQDPEFNPLCSEVDLTGYVITIIDGQGFSPAFYLADGKQNFVKVRCFSSFAQSGLEDVIKPRVLLALSNLQLRGQSTSPTPVVYAGDLTVFSTNPKEVHLQESFSQLKTLVQGQENFFVHAEEKLSQLMSDGLSAIASPAGQIQTPASTVKRRGDMTDVSSNIMVINKTSKVTCQQPGRSHRFSTPINRNSTAHSSAERNPSTIKKRKALDYLSHIPSPPPLSCLSTLSSPSVKKIFIPPRRTEIPGTLKTVKTPNQKPSNTPVDDQWVNDEELAMIDTQAL</mol_seq> | |
201 </sequence> | |
202 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">takifugu_rubripes</property> | |
203 </clade> | |
204 </clade> | |
205 </clade> | |
194 </clade> | 206 </clade> |
195 </clade> | 207 </clade> |
196 </clade> | 208 </clade> |
197 <clade branch_length="0.210044"> | 209 <clade branch_length="0.213708"> |
198 <name>ENSLOCG00000008205</name> | 210 <name>ENSLOCG00000008205</name> |
199 <taxonomy> | 211 <taxonomy> |
200 <id>7918</id> | 212 <id>7918</id> |
201 <scientific_name>Lepisosteus oculatus</scientific_name> | 213 <scientific_name>Lepisosteus oculatus</scientific_name> |
214 <common_name>Spotted gar</common_name> | |
202 </taxonomy> | 215 </taxonomy> |
203 <sequence> | 216 <sequence> |
204 <accession source="Ensembl">ENSLOCP00000009962</accession> | 217 <accession source="Ensembl">ENSLOCP00000009962</accession> |
205 <name>brca2-201</name> | |
206 <location>LG3:13357730-13380925</location> | 218 <location>LG3:13357730-13380925</location> |
207 <mol_seq is_aligned="0">MIQNLDFARGMQEMRIRKKKRQTIRPLPGSLCLTKTSGVSRVSLRAAVGGKSPAQHTQQQLYVCGVNRCVLEISSENAESFRFSCRDHFGIEFFSAGNGVQLADGGCLIPDNKGTAGKEEFYRALCDTPGVDPKLISESWVYNHYRWIVWKRAAMERAFPLEMGSRCLTPEQVLLQLKYRYDLEIDNSQRSALRKIMERDDTPAKTLVLCVCRIVSMGSLQAHDTPGNKALPYAKAKTDGPVGVIEVTDGWYAIKALLDAPLTAILRKGRLAVGGKIVTHGADLIGCQDACSPLEAPEALMLKICANSTRLARWDTKLGFHRDPRPFHVPLSSLFSNGGRVGCVDVVVLRTYPIQWMEKKADGVFVFRGDRAEEREARRHNENKQKTMEALFAKIQSEFEKEQEGKKKSNRRQRFSHQEIQALQEGEELYEATESDPVCLEACLSEQQLMTLNNYRRALNERKQTKLQEEFQKAIRSAQDRENSCPERDVTPVWKLLVVDCKNLQNNTAYFLNIWRPSTEVCSLLKEGCRYKIYQLATSETKRRIGNAAVQLTAMKKTQFEQLQVPPELLCQLYASREAVSFRSLLSPRFQPVCGEVDLVGYVISITGKQGGAPVVYLVNENRDFVAVKCWVGLSQLALEDIVQPRALLAVSNVQARPSPAAAVPTAYAAELSVFSANPKETHLQAACTLLRSAAQGIECFFEAAEEKLSKLIKEDFPCQSLKDLSSIPKTPIMKPDVQRESSNLMISFILLLPSPQVPGRSPQQSLCAFEHLTPTCGKPPLHAGRSDDKGPKSLKRKRGLIYLSRIPSPPPLAPLRSPCVNKTFQPPRRCASPLAAARGKEECRSPGPAPEAGGEWVKDEELAQINTQDL</mol_seq> | 219 <mol_seq is_aligned="0">MIQNLDFARGMQEMRIRKKKRQTIRPLPGSLCLTKTSGVSRVSLRAAVGGKSPAQHTQQQLYVCGVNRCVLEISSENAESFRFSCRDHFGIEFFSAGNGVQLADGGCLIPDNKGTAGKEEFYRALCDTPGVDPKLISESWVYNHYRWIVWKRAAMERAFPLEMGSRCLTPEQVLLQLKYRYDLEIDNSQRSALRKIMERDDTPAKTLVLCVCRIVSMGSLQAHDTPGNKALPYAKAKTDGPVGVIEVTDGWYAIKALLDAPLTAILRKGRLAVGGKIVTHGADLIGCQDACSPLEAPEALMLKICANSTRLARWDTKLGFHRDPRPFHVPLSSLFSNGGRVGCVDVVVLRTYPIQWMEKKADGVFVFRGDRAEEREARRHNENKQKTMEALFAKIQSEFEKEQEGKKKSNRRQRFSHQEIQALQEGEELYEATESDPVCLEACLSEQQLMTLNNYRRALNERKQTKLQEEFQKAIRSAQDRENSCPERDVTPVWKLLVVDCKNLQNNTAYFLNIWRPSTEVCSLLKEGCRYKIYQLATSETKRRIGNAAVQLTAMKKTQFEQLQVPPELLCQLYASREAVSFRSLLSPRFQPVCGEVDLVGYVISITGKQGGAPVVYLVNENRDFVAVKCWVGLSQLALEDIVQPRALLAVSNVQARPSPAAAVPTAYAAELSVFSANPKETHLQAACTLLRSAAQGIECFFEAAEEKLSKLIKEDFPCQSLKDLSSIPKTPIMKPDVQRESSNLMISFILLLPSPQVPGRSPQQSLCAFEHLTPTCGKPPLHAGRSDDKGPKSLKRKRGLIYLSRIPSPPPLAPLRSPCVNKTFQPPRRCASPLAAARGKEECRSPGPAPEAGGEWVKDEELAQINTQDL</mol_seq> |
208 </sequence> | 220 </sequence> |
209 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">lepisosteus_oculatus</property> | 221 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">lepisosteus_oculatus</property> |
210 </clade> | 222 </clade> |
211 </clade> | 223 </clade> |
212 <clade branch_length="0.18077"> | 224 <clade branch_length="0.178068"> |
213 <confidence type="bootstrap">1</confidence> | 225 <confidence type="bootstrap">1</confidence> |
214 <taxonomy> | 226 <taxonomy> |
227 <scientific_name>Sarcopterygii</scientific_name> | |
215 <id>8287</id> | 228 <id>8287</id> |
216 <scientific_name>Sarcopterygii</scientific_name> | 229 <common_name>Lobe-finned fish</common_name> |
217 </taxonomy> | 230 </taxonomy> |
218 <clade branch_length="0.318609"> | 231 <clade branch_length="0.100746"> |
219 <name>ENSLACG00000007788</name> | |
220 <taxonomy> | |
221 <id>7897</id> | |
222 <scientific_name>Latimeria chalumnae</scientific_name> | |
223 </taxonomy> | |
224 <sequence> | |
225 <accession source="Ensembl">ENSLACP00000008815</accession> | |
226 <name>BRCA2-201</name> | |
227 <location>JH127744.1:299190-332700</location> | |
228 <mol_seq is_aligned="0">MEWEAVESVKALMRDDELTDAGLDASKDSLNRACRRQSGGNFRARKRMRLEQVSADEPPVKRQLLAEFDRTVENGHKSLQKPLICTPNGTLKDRRKFMYSVPLKPVVCGPWSNNSKTGQQVTKPSITLPGRGVETFQPKNHIAPSPVYDPPSNRRGPVFAPPFHGATFRGLQKPSASHTSSKTAKTFVPPFKMKASASHTVHFSSKVINTCEKILENLVYLKPSLASCNIFQSLEEMTANLQCARDLQEMRLRKKQRQNIRPQPGSLYLAKTSGVARVSLKAATGNQCPSSYSTEQLYVHGVGKSTLKVRSENAESFQFSCSDYFGKDVLLAGNGLKLADGGWLIPSDKGMVGKEEFYRALCDTPGVAPKLISESWVYNHYRWIVWKLAAMEAAFPKEFGNRCLTPERVLLQLKYRYDIEVDKCRRSTVKKIMERDDTAAKTLVLCISKLISVEDRFKQTKNKNEKGAEEARKEAVAGVIETTDGWYGIKVLLDPPLTVLVQRGRLSVGCKIITHGAEIIGSQDACTPLEAPECLMLKISANSTRPACWSAKLGFHRDPRPFPLPLASLFNDGGLVGCVDVVVVRLYPIQWMEKKSDGIFVFRNDRAEEREAQRQVENQQRKMESLFAKIQTEFEQKYEAKSKRRGQKAQKFSKQEIQALQDGAELNEAIENSMDPGYFEACLREEQLKVLHGHRQMLNEKKQAEFQAEFKKALESAEQEGKSCCKRGVTPVWKLRIVDYRKPSAAEYILNIWRPLADLHSLLKEGNRYRIYQLLASQSKGRTTTADIQLTATKKTQYQQFQSFPELISELYSPRKAVKFNMLMDPTFRPAYAEVDLVGYTISIEGKPGVAPVVYLSDESHNFVAIKVWTALNQLAVEDIVKPFSLIAASNLQWRSDSRSIIPMLYAGDLSIFSSNPKEGHLQEAFNQRRTAIQENISGTYLPPEKKNLHQESYKSCQYNTLNVLMNGNIHTQSPVLSRVHMGTSCAFLFLLPSPYPESKHTSPLITMKAGVKSMTFPGSAKLMPQASENQELDTPKNRKKKAALDYLCRIPSPPALTPIRSFVSSSLQKAFHPPRSCVKLQSGENPVVPTVGNNAVLGIQSKKDEGPAAFNEEDSVADEELAMINTQAFLVGLRRDKRPSLLDKTASLKGHVPSERFLEEKLLSVLKEQASSNSERNATSLENKSCDKSRTCVKPCEHSNDSIAEETSEIIPGCHGGESAVENQSKNSSLCHKKLQQKKRRKYY</mol_seq> | |
229 </sequence> | |
230 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">latimeria_chalumnae</property> | |
231 </clade> | |
232 <clade branch_length="0.1098"> | |
233 <confidence type="bootstrap">1</confidence> | 232 <confidence type="bootstrap">1</confidence> |
234 <taxonomy> | 233 <taxonomy> |
234 <scientific_name>Tetrapoda</scientific_name> | |
235 <id>32523</id> | 235 <id>32523</id> |
236 <scientific_name>Tetrapoda</scientific_name> | 236 <common_name>Tetrapods</common_name> |
237 </taxonomy> | 237 </taxonomy> |
238 <clade branch_length="0.110316"> | 238 <clade branch_length="0.756151"> |
239 <confidence type="bootstrap">97</confidence> | 239 <name>ENSXETG00000017011</name> |
240 <taxonomy> | 240 <taxonomy> |
241 <id>8364</id> | |
242 <scientific_name>Xenopus tropicalis</scientific_name> | |
243 <common_name>X.tropicalis</common_name> | |
244 </taxonomy> | |
245 <sequence> | |
246 <accession source="Ensembl">ENSXETP00000060681</accession> | |
247 <name>brca2-201</name> | |
248 <location>GL172716.1:1071058-1096238</location> | |
249 <mol_seq is_aligned="0">MAAPQLGKSVFYDLFSTHCSHSDLGPISLNWFEELTAEALPYKSRTCEDHECSLDDLHENNIKTPKLKSSIYSQLDSTPVIFKERLLSPLFASSLTELDKRQNATDNGNNVRLEKSNCTQMQHQASEVFSPSSRCLNESPAVIKEIFKTPLRNKYLHKTPQCDWKPDICSSLFCTPKLMKNQTGCIKESLGAEVDPEMSWSSSLATPPSPTVIIAHANDQPSGNKHAAIVQSLFPNCENMEANNLPPPETGTQNEDRQICAGLEKPGSCSASKTVPEASAISSRAAWKKTVANTVKDEEVSRTVENALEGMEDVLSIFFASEKTPGLRKLKNSTQARRKVESIKSQKCQVSLFKAEEGESILVPLDEHHKCDHEMLMKPEQDYKMNAVNQKIAKETTPYEWSQLNICELDITQSQDSTLHAANLCCEDITVNKSDTCNITEAEKQEEVNEPSTDNVLSNKVGKESTLNVNCINADLNNMASSSNNSVHSLNLSQCEKMDSSEISNSEVGCITKLTTHPAKITTGELSSVDDCAKKPQERVTISTSFSTLKKQSKFMYSVNTVLTGHIASNTSIATRRSLNSHLSSDEPKPHIKENQNEPESNAKYYSNGLQKPVFLEKENDNKGISLCKTISDGQNTSEGARAPDYFEERVPETKDRCKATLSIREKVVATANCFARKQLETDYPEDASAQHEALQFHAKQYVSCSMLNSNVSNDMQIKPQVLTQACDFRSSAENLVEKTKNQLRRNEDQSFSSTGIGKKPASGEKLVGDCNEGSFLHVKQEISAAQALVGNGYETRDTPDVTSDHTRSVISNHGKSLWEEETALTELPVPEILSKTFKGFKTASNKKIHISDKNIVKGCDLFKEIEFGIGDAKPCNEENKEPLKKTPFDVPGYETNLKGFKTASNKEINVSENKFAKGRLLFKDIEEESGQTTAIMAKDNELFIKPASSNKPDIFKSTCIKGMNPSENLDSMPPKKGDVQQSAGLKHSDQIDVFGFDDPPAKGNVQTLGYFNMSASETDFKGFKTASNKDIIISESTLAKGKLIFEDIEDTRYSETGRTIDCKAKGGALSTSNLVMHNTMCKNEPSTSENTNDKAPKRAKVQTPMAENSHLKEPSSDKNAMDAANHQMTLKASAYSPKAASSALPRYKKKPISTTKTSFQLNEHLTESQQAEISELSSILENADSQFDFTQFRKVPSVTEKQNSTEGGSESQNLNNSDVWKDVDFNDSFAAGRDHSEGMEAIPSSPGIKELPSAGECCSKETHDSMPDFVTLAPKQGFLVKQNERLFAGFNLASGKQVNIDNDVLKKAAELFNDIDNDKELLSHAKEESRKSNIKHSSKLINNENCGKTEHTSEHLVCQSNVSLPFIKTLGKNATILVSGNEKSQNQELQLDCLKCESTDVKHTPQKETINDNSKCNESSLSELSMKGFQTASGRNIMMSESSIQKARNIFAEEHEDSFTLRCNIQNTIQIPQPVNEPTQFPYVNLGPKPTTTSGWQEKNILRRSTEKGFMPGFCTAGGKKVSVSDNSLAKAHKLFQEECTFSKEGKLDEVKQNKLMNSEPLSLLTCESVLKQSDGFIEDISTSRNALEIRPELYPEGMCSNRASNGSGNNSEFTAGEGISININQSSLLTTGNVLKNLPSESSGHDVYSVTEHLSTVVKVKRYNDSGHFVNQNLAECNDNHVLSTQKNTANISNRNEDCTSLAPLSFSTASGKSVTVSHDSLQKARLMLSEAANDVTVDTSKQEAAYITPAIRKTEAEKEQNTVDDSDRVNANTFSFSTASGKKVNISGNSLKQVRAVCLSSDPKETSAALFNVEKSVFNEDVKDVSLLQPNVTMPKAVSFSTASGKTVQLSDESLKKARVIFSEIDTCPLMQQQTNESTVEEIVIGGGMTKSKQMPLTTEKVETTRKNNGTFGFNTASGKQVSVSESALQKVKDIFQEFDDPDNYEQNKSLVRLPVSSKIKESTPGTKRLVQTAGSSYKNDNLQCKAGNLRTFQDKQAGKKSLTYSEAAISPIESSVPIYEMQVMLKHTNNQACKYQPRVEVPLQDQRWQNILEIELPATCAPAFRETHNILFFGDLQHSTHFDICSLYSGKNPAVKHQLASHSKMQTLVISGRDSSGTLTLQFTLRIVILHTVNNQYSLNKQLFTFSSALRQVTCIPTQAHLHSKVKIFHQSLPIKSPDVASDSTSKSYSPTAAKETINCSSASKIPAKKFVPPFKKTVATLADNQSNSVQNGSSDGLIESIVYPKEDKVETICSSKDQFDDSDILQMTSNLRCSKDLQEMRIRKKLRQKIKPHPGSLYRLKMSHVKRISLQSAVAERCPTLYSREQLYRYGIVKNHIGVSSENALSFQFHCSNYFTKELLLSGNGVQLADGGWLIPTEQGNAGKEEIYRAFCDTPGVDPKLISAEWVHNHYRWIVWKLAAMEVRFPKTFACRCLTPERVLLQLKYRYDVEIDKSQRSAIKKIMERDDSPAKTLVLCIAKIISQGTRLPNACSNKTEPADSKESSAVIEVTDSWYGIKVLLDPCLTALLHKGRLFIGQKLIVHGAELIGSDDACSPLEAPESLMLKIAANSTRPVRWHTKLGYFKDPRPFCLHLSSLLSEGGVVGCVDVVIQRIYPMQWMEKMANGLYVFRNDRAEEREAEKHSANQQKKLEMLFSKIQAEFEQREVTCNRRKGLRRRSLNAQQMQTLQDGAEIYEAIQNESDPGYLESYLSAEQLKALNHHRQLLNDKKQALIQAEFRKAIECSEQDANGCTRRDVTPVWKLRIADYRNYETDAAYILNIWRPLPDVLSLLKEGCRYKMYHLAASTSKGKSLAADLQLTATKKTRFQQLQLSESILEQIYSPREVTDFSRFQEPLFSAPYAEVDLVGLIISIYKKTGAAPVVYISDESHNIVALKFWTDLGQLGLEEITKPRTYISASNLRWRSDCIEGIPTLYVGDLANISSNPKESHLQRAIQKLKLSVQNVQDFWNSSQTALMKTLQINSTDTTECSKNPTTPTWKSDVSARSGYLTPLHHSGKRLLNSVHTSDPQTENPGCSKEIQLKTCKKRKALDFLNRIPSPPPVTPVRPFVSPSLQKAFRPPRSCSVQKLGPETKGNTENVQGTTPECTKDLAKLEGEFVADEELAMINTQALLLGLEEEKKKTEQKTSRTAGKMTAHESPIENASPVPAQEQQTEEALNIPVGNSEKSYLCLRKRKRK</mol_seq> | |
250 </sequence> | |
251 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">xenopus_tropicalis</property> | |
252 </clade> | |
253 <clade branch_length="0.125605"> | |
254 <confidence type="bootstrap">94</confidence> | |
255 <taxonomy> | |
256 <scientific_name>Amniota</scientific_name> | |
241 <id>32524</id> | 257 <id>32524</id> |
242 <scientific_name>Amniota</scientific_name> | 258 <common_name>Amniotes</common_name> |
243 </taxonomy> | 259 </taxonomy> |
244 <clade branch_length="0.104539"> | 260 <clade branch_length="0.091784"> |
245 <confidence type="bootstrap">95</confidence> | 261 <confidence type="bootstrap">82</confidence> |
246 <taxonomy> | 262 <taxonomy> |
263 <scientific_name>Sauria</scientific_name> | |
264 <id>32561</id> | |
265 <common_name>Reptiles and birds</common_name> | |
266 </taxonomy> | |
267 <clade branch_length="0.349367"> | |
268 <name>ENSACAG00000004541</name> | |
269 <taxonomy> | |
270 <id>28377</id> | |
271 <scientific_name>Anolis carolinensis</scientific_name> | |
272 <common_name>Anole Lizard</common_name> | |
273 </taxonomy> | |
274 <sequence> | |
275 <accession source="Ensembl">ENSACAP00000004459</accession> | |
276 <location>3:183721796-183749387</location> | |
277 <mol_seq is_aligned="0">MEDTIVTQSKPQHRCNALSLATKNLEKRSSQNLLSTKILTCVCDSEKSRNTETKHSTPCNIPRKGNLYSHCHTYSQTPENYLETEASESARAFMEDDDLTDSEAERNKKAFASNSEINNSYSYARAGKRCMEKENTFGEPPIKRKLLPEFDQSERSSLKASRSSLDGTMNDRKTNIYGILLKPVNCDSLSFTKEVKKPNFTTPGRDLKGFKSDGPQQHVSKHSSSTSSCVFKQFSNTSVREESKKTDNPTAKTTIKVFVPPFKTKPSASEDEINSKESYFQNNNSVHGELSNTKVHETFLQPEKEKYEKISAVDSEIREIDLGLTNIASLHCARNLQEMRILKKQKQVIGPQPGTLYLMKICATSCRIPLKTAVDEKCPGSYFSEQLYAFGVSKQCLNVNSSNAEHFQFHIQDFFGRECFLDGNGIQLADGGYLIPTDDGKAGKEEFYRALCDTPGVDPKLISKAWVYNHYKWIIWKLAAMEVAFPQEFASKCLTPERVLLQLKYRYDVEVDKSCRSAIKRITERDDVAAKTLVLCISRIISLSSNVSCISGNKSTTEENKKDVAVVEVTDGWYGIKAVLDPSLQSLLHKQKLTVGQKIVVHGAELMGPQDACSPLDVPESLMLKISGNSTRRARWYSTLGYYRDPRPFTLPLSSLFSDGGIVGCIDVVVQRIYPTQWMEKTSTGSYMFRNCRAEEREAAKHAENKQKTLEALLANIQAEFEKNEETGEGKRVLRSRTLTRQQIRSLQDGAELYEAVLNAADPAYMEGYFSEEQLKALNSHRQMVNDKKRAQIEAEFKKAVESAEQDKSSSCSRDVTPVIKVRIVDYRKEEKEVILTIWRPSSHVCTLLKEGCPYRVFHVAASPSKGRAEPTNLQLTATKKTQYLQLPVSQEVLSQVYRPRECLMFSELLLESFRPACSEVDLVGYVVSLRKGTGFSTLVYLSDKDHNLIAVHICTDLRQFAVEDIIIPSMLISATNLQWRPKFYSNIPSLFAGDLSTFSSKPKETRLQEIFNDLRNTVESDSCFQKDAERKLATLLQTNVPQVMNLPKEHDFDPFPSPWRSDAGNKHLISTPNTELRLPSPLSIKRPNTKAPGSLCSTKVKADLQETPKNLEKRKAMDLLSQVPSPPPVKPICTFISPSLKRAFQPPRSSDPHHERFLKKTESTVREPGVKRPNETNFQLENYFVADEELAMINTQAFLSNSTEEKEAGFTEKIAHTSHNDSSNSFSLRNNSCPSGKDKT</mol_seq> | |
278 </sequence> | |
279 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">anolis_carolinensis</property> | |
280 </clade> | |
281 <clade branch_length="0.038711"> | |
282 <confidence type="bootstrap">82</confidence> | |
283 <taxonomy> | |
284 <scientific_name>Archelosauria</scientific_name> | |
285 <id>1329799</id> | |
286 <common_name>Birds and turtles</common_name> | |
287 </taxonomy> | |
288 <clade branch_length="0.294625"> | |
289 <confidence type="bootstrap">100</confidence> | |
290 <taxonomy> | |
291 <scientific_name>Neognathae</scientific_name> | |
292 <id>8825</id> | |
293 <common_name>Birds</common_name> | |
294 </taxonomy> | |
295 <clade branch_length="0.096785"> | |
296 <confidence type="bootstrap">100</confidence> | |
297 <taxonomy> | |
298 <scientific_name>Passeriformes</scientific_name> | |
299 <id>9126</id> | |
300 <common_name>Perching birds</common_name> | |
301 </taxonomy> | |
302 <clade branch_length="0.042591"> | |
303 <name>ENSFALG00000008451</name> | |
304 <taxonomy> | |
305 <id>59894</id> | |
306 <scientific_name>Ficedula albicollis</scientific_name> | |
307 <common_name>Flycatcher</common_name> | |
308 </taxonomy> | |
309 <sequence> | |
310 <accession source="Ensembl">ENSFALP00000008821</accession> | |
311 <name>BRCA2-201</name> | |
312 <location>JH603207.1:3296246-3332661</location> | |
313 <mol_seq is_aligned="0">MACKPGERPTFFEIFKAHCNESDLGPISLNWFEELSAEAPPYEPKSFGEVDGPSGWLDQTAFKTPRTKPSTYSQLASTPLLFKEQNAILPPSPEKEPDQKKIGANRENLISPSNRRRKLDQENEILASPPGTFHNCLAASPAILRNTYRTPQRNNIPGPYGSLFCTPKLSEVRTPKCISESLGAEVDPDMSWSSSLATPPTLGETVIIARENDSISEAKRQDGRADTILHNYFSKHDKCPGISDASMLSVPETVKLNAEDDIKDLESEVLDGLLGEMDSSEDTFSMPAESSRTLLLMPHALDAVEKYEINPDKAQEKGDVPSQQPNGRKNGISQEVKTNSWTENSLCTQVNSSLLQNTHEDTGDGKDGSLIGHEKELESLRKAGDVHDCRPHKSFENERPVKEGVQSPPSQWSQLNSDLDGTHREMSVCSSLPSDLRREENLEEKSLLMAKDDVAETSLLNSSGLIKAQKLFNVDLSEKSREMKDTESNPTSEITPVKSVSLGVQDPELAKECAAEVSKMSFSNCNSFLIEHANVTEYSLVYGGNFSKHLKAASKSVITDVLPHPLVCSATSPDNCDDLHLINSENTPTKSGFKNLKMLPSLRKRSKKFIYRINNTLLYQEEKIQKEVTSESPIHSVLPHLESDSYEFRGCLVASDVKQDHFLPAERKHLESNTSAKNFSTSTSKIDIMDNSSGNSFSDTLEQDLRDLGENAREDQPATSIKCLEVSNTLKEGITNSLNSEIISNIKRKVLTSACLMARKRSKLLPETTCALEKGKEDNMSAKVNDGAAAPQSLEELGSSQRDREVLVDIQGDSTSVTNSSSHNTLCQINLGITGVSSGCCNKLSPHKRHATDQRSGVDCREVHRPLGINCSEYDSTGLKQGEKTDDPANNEDPKPTENSKSPQAAAFSNVAVDISKELLDCIDNNSLNEVISAEDKQIAPMCSSKKPNKNLKCKRESSVNLNACSLNLGFSGFQTASNKQIKFSEASIAKGRLLFKDIENECFEASSMERVSNFPHKVKKENILFSGSKNKLGSNSSDSSDSQASFLEPRHAEFIPHKVGLCKSFPGTPQALQEANQTLTASQEAEIAELSSILEETGSQFEFTQFRKQNNTTQSRSLQKLGTVETRRIKNVENISETRKDMGVCSTLKSENQVKNDKFCTQEEDTNEDSELVENEKENAVFFHKNDKKVTFTNLDINESRRSDESFPIPKQDSFSNFIGFTSAGGKKINISKAALSRSAELFRDLDDDNYLFKSSETGTRCHNSNGSMSSNSNSSRCLTKESKEKTVSDFKSVSHTGSVSYHAQNKNEENTSTGFKEDMENKTKISVNNIENVSFGSISILNCLLSTKNRKQNFKTSKQILNPGDDEGNLQDHSLDVTCLEDAITTAEEHSLNTSCEMENHSPKQKGEDRKEDECLSPKFQTPAAGDISIPDAILDHSLPLFSVQCGEGDVHVLENFDKEKINCKNIEDTAHGKDLLVNESRIEIGSYHHCQIPLEQEVNVGENKVEGSYLTGFHTASGKKIAIADGFLAKAEQFFADVDVGMEHDNFENLIKKRKFGKNCVKDCDLGIESIAQCDSEKPNFNEKLVPEELGDQFNQAIERSPIKHAVILDPGEVDTFVDLGEACEGGLVPSHAHKKADVKPGKSALESHIGQKSDALSRTHLSEDRNFLAEKKVPYSPRKRDDSENTDDFPVHSAASLHLMKVPHDLEDNCVPGDTKNALFVKESNNKADQSLLLDSKSSCSYMNGDSKEFDLEHLNEPAADKNSFTGTIANACQNQSLMSLPEEETNFSRLKETTLKVEKQRGHLKQTVFSTAKGRAVSVSESALARVRQIFQDCSEAVKYEIEPNSKTNQTEIARNSSVVLHTEYPNSAELFNARTSEEVNSAASQFIKVNASADEDSHQEGNTSADAKSVSNSQKQSFEQNIKLLGHFVPNKQIKPSDASTSNFGFFNTASGKPVQLSEESLRKARQLFSEMEGNHSQHVQEAFLVEEDVEKSKMHTEVLPRRMQVVSSKGVENTSPELISDSAFGFSTASGKQVKVSKDAYQKAKAILEESDCILDSGLCTTDHLSSIKDSGQHVKSLTDKVISEFKTEKGCNQNSDFKSTCPQEIKYFPSTYYVKMPEHTPYKKENKQLTSFENNLQQEETESFGKGQLNLGSKPESEAISCSAAAKAEIDTNLLQSPKNYLEVEAAESARAFMEDSFSSSGVQINAAQTFSGRLDKNFQNKSFGKRRFEENNSLGEPPIKRQLLLEFNRTKDSPRSLKASKSTPDGIFKDRRKFMYHVPLKPITCQPFGSTKERQEVKNPTLTLPDQDFRGFQSKPAIFQHCALRHSSDSAAEASTPCKASTKESEEMRSLYKPGKAAKTFIPPFKTKLTFSTCEQGSSKRSDSPISKSMTKEMELNQIRTEQNTADPQDHQSDIQQAADTDLENGNLAVTWMVTNLRCARDLQEMRIKKKCRQNIRSQPGTLYVIKTSASNRISLKTAVEEKSPSFYSTEELYTLGVSKQCVQVNSTNAESFQFLIKDFFSKEYLLAGNGMQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIIWKLAAMEVSFPHEFANRCLTPEMVLLQLKYSRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLDAVASPGNSNKNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRRLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLGFHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRTYPVQWMEKTTAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKHEERSSRRTPRSRIVTRQQIRNLQDGAELYEAIQNASDPGYMEGYLSDDQLKALKAYRQLMNDKKHTQMQEQLKKALESAEQEENGCYKRDVSAVWRLYVTDYRKQEKHKGAVLSIWRPLPDVCSLLKEGTRYRIFQLSASQPRGRADSTNIQLTATKKTQYLQLPVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVSRTGFTTVVYLSDESYNLVAIKIWTDLRHLAIEDVLVRCSLISASNLQWQSEFRSEIPVLLAGDLSLFSASPKEFYLQEKVNELRSVIENVASFCSDAESKLMNLLRRNLLLTPSLTKRCGLESPSPSCSFAEDKSLMSSRTEMKYPSPLSTSTPSMKVVTPGSAKAPSSATVDEDHLKTSKKRKAMDFLSCIPAPPPLTPICSVISPSVKRAFQPPRSLGLQHSKSPKVTDQNSGYVTPCRKVRETVHLPENDLVADEELAMINTQALVNNLPEEKKMDVNENSTATATTLSDDLSSRNSSRSTGEANNSSKSVLK</mol_seq> | |
314 </sequence> | |
315 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ficedula_albicollis</property> | |
316 </clade> | |
317 <clade branch_length="0.059568"> | |
318 <name>ENSTGUG00000011763</name> | |
319 <taxonomy> | |
320 <id>59729</id> | |
321 <scientific_name>Taeniopygia guttata</scientific_name> | |
322 <common_name>Zebra Finch</common_name> | |
323 </taxonomy> | |
324 <sequence> | |
325 <accession source="Ensembl">ENSTGUP00000012130</accession> | |
326 <name>BRCA2-201</name> | |
327 <location>1:50805062-50838975</location> | |
328 <mol_seq is_aligned="0">MACKPVERPTFFEIFKAHCSESDLGPISLNWFEELSAEAPPYEPKSFAELDGPSGWLDQTAFKTPRTKPSTYSHLASTPLLFKEQNSILPPCSSPEKEPDQKKIGANRENLISPSNTRRKIDQENEILASPPGTCHNCLAASPAVLRSTYRTPQRNNIPGPYGSLFYTPKLSEVRTPKCISESLGAEVDPDMSWSSSLATPPTCVETVIIARQNDSISEAKQQDGRADTILHNYFYKHDKCPGISDASMLSVPETVKLNPEDDIKDFKSEVLDGLLGEMDSFEDTVSMPAESSGTLLLIPHALDAVEKYEINPEKTEEKGDVPSQQPDGKKNGISQEVKTNGWKLENSHCTQVNSSLLQNTSEDGCLIGHKKELESLRNAGDVNDYRPHESFENERPVKESVNSPSSQWSQLNLSGLDKAHMEMSVCSSAPSDLRGGENLEEKSLLMAKDDPVETSLLNSSCLIKAQKLLSVDLSEKCCEMKNTENNSTSEITPVKSVSLSVQDPELVKGCAAEVSKMSFLNCNSFLIEHGNDTECSVVYSEKFPKHLKATSKSVVTDVLSHPLVSSAKSPDNCDDLYLINSENTLTKSGFKNLKMLPSLRKRSKKFIYRINNTLLYQDEKIQKEVTSESPIHTALPHLESDSYEFRDCLVASDVEQDCTFGKYLESNMRTKNFSTSTLKIDLMDNSSDNSFSDGLKQQDLEDLGENAREDQPAASIKCLEVSNTLKEDTTNSLNSEIVSNIKRKVLTSACLMARKRSRFLPKSCALGKGEEGKDISAKVNNGAAVPQSLKELGSSHRDKELLIDIHSDSMSLCQINFGITGVSSDCCNKLSPNKRHSADQRSGVDCGEVQRPLGINCSENDSTVLKQGEKTDAAAFSEDVANTENSKSPQAAAFSNVPVDISKELLGCGDNSLNEVISLEDKQVAPTYSSKMPNKNLKCKGESSVNLNACSLNLGFSGFQTASNKQIKFSEASIAKGRMLFKDIENECFGASSMERVRNFSHQVKKENMLFSDSKSKLGNSQASFLEPRHTQFTPHKVGSCKSFPRTPQALQESNHTLTASQEAEIAELSSILEETGSQFEFTQFRKQSNAIQKTAETHGTKNVENISDTRKDVEVCSTFDSENQVKNDKYCAQEEDTNEDTELVKNEKENAVFFHENDKKVTLTDLDINESRRSDESFPIAKQDSFSNFIGFTSAGGKKINISKAALSRSAELFRDLDDDNYLFKSSETATRCHNSNGSMSSNSNFSRCLTKESKEKTVHVSDFKSVNAVSHTGSNKNEEHTSTVFKENMENKTKISVNNTENVSFDSINIINSLLSTKNHNQNYKTSKEILNQGDDEGNLQDHSLDVTCLEDAITTVEEHRLSTSYGMENQSPKQREDRKENECLSPKLQTPAGGDIFIPDAALDYSLPLFSVQCGEGDVNVLENSDKEKTDCKNMEEDTSHNKNLLVNESRIKIGSYHHSQIPLEQEVNMGGNEVEGSYLTGFRTASGKKIAIADGFLAKAEQFFADVDIGNDNFETLTEKRKCGKNCVKDCDLCIESVAQCDSEKLNLNEKLVAEELGDQAVDSSPIKHAMILDPACEGSLVTSHTHKKADVRPGKSELESLKGQKIDVLSRTHLSEDGKFLAEKMVDYLSRKRDDLGNTHDFPVHSAASLHLIKVPHDVKDNSVPGGTKNTLFVEESNNKGDQSLLLDSKSSCSYINGDSKEFNLKHLNEPAADKNCFTDTIDSACQNQTLVSLLEEETNFNRLKETTLKVEKQRGDLKQTVFSTAKGKAVSVSESALASVRQMFKDCSEAVKYDIEPNSRRNQTEIARNSSVVLHTECPNSANFFNATTSREVNSATSQFIKVNASADENNHQERSTSADAKSVSNSPKQSFEQNSKLLVHFVPNKQIKPSDASTSHFGFFSTASGKPVQLSEESLRKARQLFSEMEDSHSPHVQEAFLVEEDVEKSKMHIEVLPREMQVVSSKGEENTSPELISDSAFGFSTASGKQVKVSKDAYQKAKAILEESDYILSSGLCTTDQLNSIKDSGQHVKSLTDKVISEFKTEKSCNQDSDFKGICPQEIKYFPSTHHVKMPEHTPYNQKKKHLASFKNNFQQAKTESFGQGQLNLWSKTDSEAISCSATAKAEINTNLLQSPKNYLEVEAAESARAFMEDSFSSSGVQINAAQTFSGRPDKNFQTKTFGKRHFEENNSLGEPPIKRQLLLEFNRTKNSPRSLKASKSTPDGIFKDRRKFMYHVPLKPITCQPFGSTEERQEVKNPTLTLPDQDLRGFQSKPAIFQHCALRHSSDSAAGVSTPCKASAKESEETRSLYKSGKAAKTFIPPFKTKLTFSTSEQGSSSRCDSPISKSMTKEMELNQIRTEQNTADPQDQQPCIQHAADTDLENGNLAMARMVTNLRCARDLQEMRIKKKCRQNIRSQPGSLYVIKTSASNRISLKNAVEEKSPSFYSTEELYTYGVSKQCIQVNSTNAESFQFLIKDFFSKEYLLAGNGMHLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIVWKLAAMEVSFPREFANRCLTPEMVLLQLKYRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLNTVVSPSSSNKNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRQLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLGFHRDPRPFPVPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKHEERTSRRTPRSRIVTRQQIHNLQDGAELYEAIQNSSDPGYMEGYLSDDQLKALKAYRQLMNDKKQTQLQEQFKKALESAEQEENGCYKRDVSAVWRLYVVDYRKQEKHKGAVVSIWRPLPDVCSLLKEGARYRIFQLSASQSRGKADSTSIQLTATKKTQYLQLSVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVRRAGFTTVVYLSDESYNLVAVKIWTDLRHLAIEDVVVRCSLISASNLQWQSEFRSEIPMLLAGDLSLFSASPKECYLQEKVNELRSVIENVASFCSNAESKLMNLLQRNLLLTPSLTRRCGLESSSPSCSYTDNRSLISSRIEMKHPSPLSTSTPNMELVTPGSAKTPSPATVNEGHLKTSKKRKAMDFLSCIPAPPPLTPICSVISPSVKRAFQPPRSLGLQHSKSPKETDQNIGLVTPCRKVRETVHLPDDDLVADEELAMINTQALMNNLPEKKKMDYINEISKATATTLSDDVSSRNSSRST</mol_seq> | |
329 </sequence> | |
330 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">taeniopygia_guttata</property> | |
331 </clade> | |
332 </clade> | |
333 <clade branch_length="0.030465"> | |
334 <confidence type="bootstrap">100</confidence> | |
335 <taxonomy> | |
336 <scientific_name>Galloanserae</scientific_name> | |
337 <id>1549675</id> | |
338 <common_name>Fowls</common_name> | |
339 </taxonomy> | |
340 <clade branch_length="0.080949"> | |
341 <confidence type="bootstrap">100</confidence> | |
342 <taxonomy> | |
343 <scientific_name>Phasianidae</scientific_name> | |
344 <id>9005</id> | |
345 <common_name>Turkeys</common_name> | |
346 </taxonomy> | |
347 <clade branch_length="0.03698"> | |
348 <name>ENSMGAG00000015077</name> | |
349 <taxonomy> | |
350 <id>9103</id> | |
351 <scientific_name>Meleagris gallopavo</scientific_name> | |
352 <common_name>Turkey</common_name> | |
353 </taxonomy> | |
354 <sequence> | |
355 <accession source="Ensembl">ENSMGAP00000015990</accession> | |
356 <name>BRCA2-201</name> | |
357 <location>1:182034286-182069530</location> | |
358 <mol_seq is_aligned="0">MAYKFGKRPTFFEVFKAHCSDSDLGPISLDWFEELSSEAPPYEPKLLGEPEGPIGWFDQTFKTPKAKSSTDSQLASTPLIFKEQITMPPFSSPGKELDQKKMETSRENLQSPNMAGRKTDQENQILASPHGICHNYTAASPAIFRNTCRTPQKSNIPGPYGSLFCTPKFLEIRTPKRICESLGAEVDPEMSWTSSLATPPTLGATVIIARENDSISGAKQQDERAEIVFHNFLSKNGEYTTKNDTSLLSIPETVKLNAKDDIKDLELEMLDGIFGEMNSFEDSFNLPAESSGTLLLLPRALDAIEKCEIKIDEAQGKDDVLSEQRMRRKTAISQEVKAANLSEKSCCVEVKDSVFQNTDEDIVDSKDSSLIGHEKELEYLRIAGNLQDNRTQKSSVNEKLMKDVLSSSNQWSQLNLSDLDVTHLETSMCSSPQSDLHREKGLEEKSELMTKDDVVETSLLNTGDLKNAQELSSASLSENCSDTEISKNIPMTEITPVKPLCASPKLVKGCAHEGVCKMNFLNCSSFLIESTNVMEYSVVYNSTFSTHLKATSKSVVTDVFSHPLICSAASPDNCSDLHLTNSENALRKSSFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPANPLLTRLESDLHEFKGCQVATGVNQDCLLSAKRQSNIKENNFNTPTTEIDAMDNSSDNSVNNRLKQQELSDSGKNAREYQPATSFKCLEASHTQSEDTTDCLKSGRISDIKHKVLTSAYLMARRCSRVFPEDCCLKKGKNDPYISPNMNSQTAVPQSPIGQPPQSFPSCSDCLSDIHHGTAFVANSKFSNTLSQIKFGMNRVGGNSCNKISADKRHATDQLSAEYREIVAPLEINCLENNSTGLKQRGKEDVAENQETFSMKNSENSQAAAWNNKSVEVAEEFLDCIDNSLNEVISEEDRQLAPVCFNTKPIENLEHKGKSSGDLHTCSSSLRFGGFQTASNKQIKFSESSIAKGKMLFKDIENECFEASSMERVRHFSNQVQKENIFSSDLESKKGSTSSGLQTRCTQYIPCKVDLCKNSLRNKLSVQEPTQSLTASQEAEIAELSNILEETGSQFEFTQFRKQSNMIQSHVQQFGATNVENASEAGEDTNFYSTFKSENHVINDEYCSKLKNENECKMVEYEKENTVVFHKNKKKITSSNLDRNKSGISNHESCLVPLQASFSNFVGFTSAGGKKINISKAALTRSAELFKDLDDDSFLFKSSETNTGCCNSDGHVSSNGNFIRCQTKEDEGGILCVPNIRSIGPISHHSEYVEDISTPCKESTENWTEILSDNENVDFSCTNARYSASGMRNNPSSFKKPHQNCKNSDQFLNREDSHVEGCLQEDTSYLMCLGDNTNSTEERGLSVSDEMGNLSPNQKEDKKQEDEHLLLNCQAADTDAVSISDSSLCSSLRDLNVQCGERDTDVSENSSKQKTNSVNVEGEDSTNKNPLVSESGIKIGSYQHHQVPSEQEMDVEKNEVKGTYLTGFHTASGKKITIADGFLAKAEQFFSENNVDLGKDDNDYFEDCLRKCNKSCVKDRGLYMDGVAQRDADVLNFKDKLISEEPGDQRKQAIEGSPIKQAINHDSIKVGAFINVDEECERNLAAPCANKESYVRPGKSESLPGHGSNSLSRTLLFEDRKLLAERDVQHSAEKRDNSESKPDFRLKCATSLHFTKVSSDLADIPVPGGIIKTVSAEDSCKSSQSLLLIHGSVPKSSSPYLNCGTKEIGLKRLNEPCSNTDCFTNTADNAHQEQPEVDLPEDGTNLTWLQETSLNAESQKSDLKQMFSTAKGKAVSVSESALSSIRQMFQTGCDEHVKSEIETKSGTNQAEIAGSSSFSIHAGGPGFATFLDPTKSEMNLAASPFINGNGHLIENNRQGANTSADADSVQDFQMQCFEQKSKPLGHLSVPNKQREQSGPSGNLGFFSTASGKPVQLSEASLKKARQLFSEMEGSHSPELQDALLLEDVEKSRNSDEIFPREMQLALPRGKENASTDKISSPALGFSTASGKQVTISESAYRKAKALLKEADDLSSELGVTRELREIKESGQHAKYLTSKVISESKTGKSCSKELDLRSIHPEEMKSFPSTHRVKITEYVSHNKRNSQSAPFKNSFEQEETRLFRKGELNLRMKTEAESDLCSATTKAEINIFQTPKGYLKTEAVESTKAFMEDDLSDSRVQVQSAQSFIGKMSDNFQNKPFGKRHLEEKDSLGEPPIKRQLLLEFEKMKIPPKSFKPLKSTPDGIFKDRRKFMYHVPLKPVTCQPFGTAKERQEVRNPTLTLPDQDSKGFKSVPAVFQHCALRQSSSGASGLFTPHKAMAKESEETRSLCKSGKAVKTFVPPFKTKLMLSTAEQGSSKRCHSPVTNSVTEERELNQIPVEQNSAEAQDHQSCIPHAVVTDVENDNLVKSNMMANLCCARDLQEMRIKKKYRQNISPQPGSLYVIKTSARNRISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPHKFANRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCISKILSLNAALSPGNSNNSTECEKAAAIIEVTDGWYGIRALLDPPLKAFLRRRRLTVGQKIIVHGAELTGSPNGCTPLEAPDSLMLKIAANSTRRARWYTKLGFHRNPGPFPLPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKQEERNCRRAPGSRIVTRQQIHNLQDGAELYEAIQNAPDPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIQEEFKKAVESAEQEKHGCSKRDVSTVWKLFVVDYRKQEKHKGVILSIWRPLLDVCSLLKEGGRYRIYQLSTSQSKGRSDSTNVQLSATKKTQYLQLSVSQKMLLQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRTGFPNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSEFRSEIPVLLAGDLSAFSASPKENHLQEKFSELRRMIENVDSFCSDAERKLMNLLQRNCSLTPILPKKCGLECFSPSCNSGLYAEDESSISSKIEMKHPSPLSASTPNTKLFPQGSAITPSSALSNENHPRNSKKRKAMDFLSCIPAPPSLTPVCSIISPSVKKAFRPPRSLGSQHSKLSKETNPNAGCVTPGRKLREAVQLSDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRASNLSGDTRATNLSGDLSSKNSSRSAKEANSLLKSSSEGADALQKDTEEREGLLSIRRGLQRHKSRKCY</mol_seq> | |
359 </sequence> | |
360 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">meleagris_gallopavo</property> | |
361 </clade> | |
362 <clade branch_length="0.029944"> | |
363 <name>ENSGALG00000017073</name> | |
364 <taxonomy> | |
365 <id>9031</id> | |
366 <scientific_name>Gallus gallus</scientific_name> | |
367 <common_name>Chicken</common_name> | |
368 </taxonomy> | |
369 <sequence> | |
370 <accession source="Ensembl">ENSGALP00000027524</accession> | |
371 <name>BRCA2-201</name> | |
372 <location>1:173820724-173857456</location> | |
373 <mol_seq is_aligned="0">MAYKSGKRPTFFEVFKAHCSDSDLGPVSLDWFEELSSEAPPYEPKLLGEPEGPIGWFDQTFKTPKAKSSTDSQLASTPLIFKEQNTMPPFSSPGKELDQKKMETSRENLLSPSMAGRKTDQENQILASPHGICHNYTAASPAIVRNPCRTPQGSNIPGPYGSLFCTPKFLEIPTPKRISESLGAEVDPEMSWTSSLATPPTLGVTVIIARENDSISGAKQQDERAEIVLHNFLSEDDGYTAKNDTSLLSIPETVKLNARDDIKDLESEVLDGLFGETNSFEDSFNLPAESSGILLSPRALDAIEKCEIKIDEAQEKSDVLSEQHRRRKSTISQEVKAANWTEKSCCVEVKDSIIQNTNEDIMDSKDNCLLGREKELEYLRIAGNLQDNRTQKSSVNEKLVKDVLSSSSQWSQLNLSGLDVTHLEMSICSSPQSDSCREKGLEEKSVLMTKDDAVETSLLNTSGLRNAQELSSASLSENGSDTKISKNNPMSEITPVKPVCASPKLVKGYAHEEVSGMSFLNCSSFLIESTNVMEYSVVYNSTFSTHLKATSQSVVTDVLSHPLICSAASPDNCSDLHLRNSEKTLRKSNFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPDNPVLTHLESDLHEFKDCQVATDGNQDCLLSAERQSNIKENNLNTLTIKVDIMDNSSDNSVNNRLKQELSESGKNAREYQPATSFKCLKASHTESEDTTDCLNSGRISNIKHKVLTSAYLMARRHSRLFPEDCCLRKGKNDTYTVSNVNSRAAVPRSPKGQPPQSSPSCSDCLIDMRHGTAFVTNSKFNNTLSHIKFGMNRVSSNSCNKISADKRRASDQLSVAECREIVAPLGINCLENNSTSLKQRGKEDVDENQETLSIKSSENPQAAAWNNESIEVAEEFLDCIDNSLNEVVSEEDRQVAPVYFNTKPIESLEHKGKSSGDLNACSSSLSFGGFQTASNKQIKFSESSIAKGKMLFKDIENEFFEASSMERVRNFSNRVQKENIFSSDLESKTGSTSSGLQTRCMQYIPRKVDLCKNSPRNQLSVQEPNQSLTASQEAEIAELSNILEETGSQFEFTQFRKQSNMIQSHIQQFGATNVENASEAGEDTNFYSTLKSENHVINDEYCSKLKNENECKMVEYEKEDTVVFHKNKRKVTFTNLDRNESRISSHESCPVPLRDSFSNFVGFTSAGGKKINICKAALTRSAELFKDLDDDNFLFKSSGTNTRCCNSDGHVSSNWNFLRCQTKEDEGGILCVPNIKSVGPISHHSEKKYAENISSPCKENTENWTEILSDNVDFSCTNGGYSASGMRNSPSSFKKPHQNCKNSDQFLNQGNSEVEGCLQEDTSYLICLGDNITSAEEHDLNVSDEMENLSPNQKEDRKQEDEHLLLNRQAADTDAVSISDSSFRSSLRDLNVQCGERDTDVSEKSSKQKTNSVSVEGEDSTYKNLFVSESEIKIGSNQRHQVPSEQEMDVDKNKVKGTYLTGFCTASGKKITIADGFLAKAEEFFSENNVDLGKDDNDCFEDCLRKCNKSYVKDRDLCMDSTAHCDADVLNFKDKLIPQEPGDRLKQTIEESPIIQAVNHDSIKVGAFINVDEDCERNLAAPCANKEAYVRPGKSEVESLPVHGNNSLSRTLLLEDRKQFAERDVEYSATKRDNSESKPDSSLKCATSLHLTKVSSHLADNSVPGGIIQTVSAEDSCKSNQSFLLPRGSVPRSTSPYLNCGNKEIDLKRLNEPCSNTDSFTNTVDNAHQEQSEFDLPEDETNLTCLQETSLNAESQKSDLKQVFSTAKGKAVSVSESALASIRQMFQTDCDASVKSEIETKSGTNQTAIAGSSSFSIHAGGPGFATFLDTRKSEMNVAAPHFINGNGNLIENNHQGANMFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSGPSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHSSGLQDAHLLEDVEKSTNHGEVFPREMQLLLPRGKENASTDKISSPALGFSTASGKQVTISESAYQKAKAILKEADGFLSSELGVTNELCEIKESGQHAEYLTGKVISESKTEKSCSEELDLKSIHPEKMKSLPSTHRVKITEYVPHSKRNSQSAPFKNSFEQEETRFFRKGELNLGIKAESESDLCSATSKAEINIFQTPKDYLKTEAVESAKAFMEDDLSDSGVQVKSAQSFGKMSDNFQNKPFGKRHLDEKDSHGEPPIKRQLLLEFEKMKIPPKSVKPLKSTPDGIFKDRRKFMYHVPLKPVTCRPLGTTKERQEVRNPTLTLPDQDLKGFKSIPAVFQHCALRQSSSGASGLFTPHKAVAKDSEETRSLCKSGKAVKTFVPPFKTKLTLSTGEQGGSKRCHSPIRNSVMEERELNQIPVEQNSAEARDHQSCILHAAVTDIENDNLVTSNMMANLHCARDLQEMRIKKKYRQNISPQPGSLYVTKTSARNRISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVCFPHKFANRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKVLSLNTAVSPSNSNNNTEGEKAAAIIEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELIGSPNGCTPLEAPDSLMLKIAANSTRCARWYTKLGFHRDPRPFPLPLSSLYSEGGTVGCIDVVVQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKHEERNCRRAPRSRIVTRQQIHNLQDGAELYEAIQNAADPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIREEFKKAVESAEQEKHGFSKRDVSTVWKLFVIDYRKQEKHRGVILSIWRPLLDVCSLLKEGSRYRICQLSTSQSKGRSDSTNVQLSATKKTRYLQLSVSQKMLQQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRTGFSNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSEFRSEIPVLLAGDLSAFSASPKENHLQEKFNELRRMIENVDSFCSDAESKLMNLLQRNCSLTPILPKRCGLECSSPSCNSGLYAEDRSSISSKIETKHPSPLSASTPNTKLFPQGSAITPSSAVSSENHPRNSKKRKAVDFLSCIPAPPPLTPLCSIISPSLKKAFQPPRRLGSQHSKLSKETNPNAGCVTPSRRLREAVQLPDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRATNLSGDTRATNLSRDMRAPNLSGDLSSKNSSRSAKEANSSLKSSSEGADALQKDTEEPEGSLSIRRVLQRRKSRKCY</mol_seq> | |
374 </sequence> | |
375 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gallus_gallus</property> | |
376 </clade> | |
377 </clade> | |
378 <clade branch_length="0.116636"> | |
379 <name>ENSAPLG00000007774</name> | |
380 <taxonomy> | |
381 <id>8839</id> | |
382 <scientific_name>Anas platyrhynchos</scientific_name> | |
383 <common_name>Duck</common_name> | |
384 </taxonomy> | |
385 <sequence> | |
386 <accession source="Ensembl">ENSAPLP00000007411</accession> | |
387 <name>BRCA2-201</name> | |
388 <location>KB742680.1:477155-513214</location> | |
389 <mol_seq is_aligned="0">MACRSGERPTFFEIFKTRCSDSADLGPISLNWFEELSSEAPPYEPKLLELDAPIDQTSFKTPKAKPFTYSQLTSTPPIFKEQNTIMPPFSSPGIELDQKKIGTSRENFTSPSIIGRKRDQENEMLASPLGTCHNFLAASPAILRNAFRTPQRSNIPGPYGSLFCTPKFLEVRTPKRISESLGAEVDPDMSWSSSLATPPTLGATVIIARETSSISGPKQQDERAEIVLHSFSSDHDECPGKNDSSLLSIPETVKLNGEDVTKEFESEMLDGFFGEMDSFENTLTVPAESSGTLLLLPHALDAIDKCETKRDEAQGEEDVPSEQPVRRKTGISQEVEMGNGAEKSHPIEMKDYLSQNADEDTGDSKDACLIGHEKELDLLRITGNMQDNGMEKSCENEKLVKDDVLSSSSQWSQLNLSGLDVTHLEMSTCSSPSIDLCTDKDLKEKTALMAKDDAVGTSLLNTLGLKNAQQLLNASLSDMHEEMQKTGNNPTAEVTPVRSVHLNPELVKGHAAEKVSKMSFINCNSFLIKSTNVMEYSVVYNSSFSKCVKATSKSVVTDVLSHPLVCSTSSPDNCSDLHFTSSENTLTKSGFKSLNMLSRLKNKSKRFIYTINNTLLYQEEKIQKEVTSELPADLMLPQLETDSHEFQGCHVAADGDPDSLLSAERQLNIKEDNLSTCVKKDLEDNSSFDSRLKQQELRNLGKDTREYQPATSLKCLEVSNHQKEDTTDSLNSERISNIKRKVLSASCLMARKRSRLFPEDCCLEKGEEDTSMSHNVNNGATVPQSLKRQPAQAFPSNNDCLLDVCHDITSVTNRDVNKTLSQINFDINRVSSDSCSKISADEKHATDPLALVEHRQVLAPVGMNCSGDDRIRLKQCGKKDVAAFSGDVADNQETRLVKSDESPEAAACNKVAVEIVEELLDCIDDNSLIEVISEEDKQVPPIYSHKEPNENLEHEGKSSGIVNVCRSNLSFGGFQTASNKQIKFSEDSIAKGKMLFKDIENECFEASYVERGRNFSNQVQKENVFSSNLESKLGSALSGSQTRRTQFTPHKVDLCKNFPRSLHSLQELNQTLTASQEAEIAEISSILEETGSQFEFTQFRRQSNMVQSVEKQDIVTVEMHGAANVENNSEPWKDTDPCSTFKSENQVRNDKYCSTWKDTDEECKMVEYEKENKVLFHKSSEEVTFSDRDESGVSDGESFPVPVQASVSNFVGFTSAGGKKINISKAALTRSAELFKDLDDNYLLKSSETNTGCGNSKGSRGMSSNWNSFRCLTKENKGVSNINSVGAISHAHSISHHSENVGTPEKENKENWTERLISDDERVDFSHANARHSAYGMRNSPTSIQEQNQNHKIPKQVLNPGDCQAEDSLQEDSLYVTCLGDATATAEHCDLSISDEMENLFPAEKGEDSRQKDEHLPQKFQTSDGAISVSGGPLDNSLHGLSVNCGERDVDVSENSDKQKTTGINIEGEDTTDESLFVNESRIKMGSYQHHQVPFEQEVDVEPSEVKGSFLTGFQTASGKKITIADGFLAKAEQFFSEEDVDLGKEHNDNFEDHIKNRKRSVNCVKGCDLRIDNVAQCDAEKLISEEPGIRFKQTRGSSPTKQAVILDSVKVDAFANIGEDSDRNLVAAYEKADVQHGKSELESLSEWESKALSRTCLSEDGKLFAEMDVECSAKKKDKSESTHGFPVQSAISLPSMKVSSNPVDNSMPCDVKNTLFVEDSSKSDQSVLKAYSSVSQSHCPQLNSDSKEFDVQHLNQPCSNTSCFADAALTAHQKQSEVGLPEGGTNLACLQETSLNFNDGNPKGGLKQTVFSTAKGKAVFVSESALARVRQMFQEDYGESVKHEIKTKSRTNQTEIPVNSSFVVPAECPNSTKFLDATKREGNSAASHFTDGNVNASEDSQQDANPFEDEISVPNSQVQGFGQNTALLGHVPVPNKQMKQSDSSTSNLGFFSTASGKPVQLSEESLKKARQLFSEMESSHSSGLQEFQVEGDVEKSEKLAEEVFPRKMQLEERENASTKMISGPAFGFSTASGKQVTVSENAYQKAKAILKESDDFLSNELCIIDQLHAIKESGHRTKSRTGNVISESKTDKSCDELDFKSIHPEEMKSSSSTHHLKMPEYVPHSKKNSQLALVKNSFKQEETGPVRKGLNLGMKTESEAVSCSATAKAEINDELFQTPKSHFKVGTVGNEKASVGDHLSDPGAKTNSAQSFCGKTSDKSFQNKTFGKRHFEEKNALGEPPIKRQLLLEFDKTKMPPRSLKASKSTPEGIFKDRRKFLYHVPLKPVTCQPFGASKERQEVRNPTLTLPDQDFKGFKSKPAIFQHCALRQSSNDASRLSTPHKASAQESEEKRNLNKSGKTAKTFVPPFKTKLTFSTSEQGSSKRCDSPISKNMTEEREINQIRIEKDTAETRDHPSCILHAADTDLENGNLVMNKMMANLRCARDLQEMRIKKKFRQNISSQPGSLYVIKTSARNRISLKTAVEEKSPSFYSTEELYRYGVSKHCVQVNSTNAESFQFLIKDFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVAFPHEFATRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKIISLNAVVSPSNNNMESKKGAAIIEVTDGWYGIRALLDPPIKAFLHRRRLTVGQKIIVHGAELVGSQNGCTPLEAPDSLMLKISANSTRCARWHAKLGFHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRAYPIQWMEKTSAGSYVFRNSRAEEREAARHAEDQQKKLEALFAKIQAEFEKHEGHQDSCHTDRGFRVLSCSDLLLTNYPLGAVYNVIRRQLSTRSFRLQGYLSEDQLKALNAHRQLMNDKKQTRIQEEFKKAVESAEKEKYGCSKRDVSTVWKLCVVDYRKQEKHKGVILSIWRPPLDVCSLLKEGSRYRIYQLSASQSKGRAESTNIQLTATKKTQYLQLSVSKKMLLQIFFPRKALKFTSLLDPSFQPPCAEVDLVGVVISVSKTGFATMVYLSDESYNLVAIKVWADLRHFAIEDIVVRSSFISASNLQWQSDFRSEIPMLVAGDLSVFSASPKETYLQEKFNELRSLVENVDSFCSDAESKLMNLLQRSQSLTPTLPKRCGSECFSPSCNSGLYAADKSLISSSKMEIKYLSPLSTSTPNMKLVPQGSAKTPSFDEDHPKNSKKRKAMDFLSCIPAPPPLTPICSTISPSLKKAFQPPRSLGLQRSKSGKETNPNVGFVTPSRKVREAVRVPVNDLVADEELAMINTQALINTLPEEKKTEGVNETSTIATNLSDDLSSKRSSRSTEEAKNSLKSSSEGAEALQEDDAATKELGGSLSTHRMLQRRKSRKCY</mol_seq> | |
390 </sequence> | |
391 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">anas_platyrhynchos</property> | |
392 </clade> | |
393 </clade> | |
394 </clade> | |
395 <clade branch_length="0.191766"> | |
396 <name>ENSPSIG00000011574</name> | |
397 <taxonomy> | |
398 <id>13735</id> | |
399 <scientific_name>Pelodiscus sinensis</scientific_name> | |
400 <common_name>Chinese softshell turtle</common_name> | |
401 </taxonomy> | |
402 <sequence> | |
403 <accession source="Ensembl">ENSPSIP00000012858</accession> | |
404 <name>BRCA2-201</name> | |
405 <location>JH209329.1:1531099-1613422</location> | |
406 <mol_seq is_aligned="0">MENKMADKPVARPTFFEIFKARCSESDLGPISLNWFEELSTEALPYESETSERPEYRAVCLEQSASKTPRGKPFTCSQLASTPVIFKEQSITLPLLSSPIKELGQKKTETGKDSLVNKDHRSSPHFMKTKLDQISPLNTSLSISSAALRGIYRTPQRNNIPVARGSLFCTPKLLEVKTPTCISEGLGAEVDPDMSWSSSLATPPTLSATVIIARGNDSISGAKQHDERIAMVLHSFFSSHGKRPEKNDVNVLSIPEIVNINAGLDGKDHELEKILDGSFGEMNSLENRSGRNQITQNSLEDGERNEMRIDMPDAGEHVLSVCHTSGEHLQDVTMTNWTKKTHFDKMATILLQETNEIRGNFKDASSVCERELDSPRCEIFTTNMSNNRIPKLLENRKFTKEDMPSTFTSEWSQLNLSGLDVTQLEKNSTSDKYSPSSFCNKKRSENKLHANLSTFETSLLNTSSLIKAEKLLNINWSEHMEDETKNYEKHSTSETSIMHSVDLSVQDPSLVKVCAAEKVSEVHFLDCSSFLMENTNFTGYTEVCTSCFHKELKELSKSSITDVTSHPVLCNDSIPSNPDGTKWSTNNESTPVRSCLKNTSLLSSLKKRSKRFIYTINNASPRQEEKVKKEIKAGPSIHSASSRLEFESCPFKSPDMVSNDDQDLLVSSAERKSLKSNSEESFMLLSKYATRADRIDNSPNSSLKNKMIHLDILKSNRREHQPASSLDCSETSNTLKECLVVSSNSNNVLSVEHKVIATACLRATKHSEMDFVRTEHVVQWPKKDEMEMYGNVNPHNDTVILQTFKNQLGEPSSDNEQLVEIEQEQVSMKNRYFNDTSINCDIHKHNSVCCNRTKSEDENDATGLLPTDEWKTVTLPPLIIQSNKNSSTTTLIRESKKDTVQFSKVIVADQETESIENGDNNLQTPSNNNMVTIESSEKLFDHNNCGSLQAVISDKSTLPQLALKIGPEQIVSDFVTKAPEPNVEDKDFVKKVITFPSKRVTSDKYLYSKNHLCLDIKSKENPEDKEKWSGDTNFNGQCLNKCFGGFQTASNKQIKVSEKSITKGKMLFKDMEDECLKDFSGEGIKNISNQITKKNINIVNNKLDTNYSHGLDSQASLIESKNAQSIVPESTDSSLQSLHRNQPHQLNQTLTASQEAEITELSNILEETNSQFEFTQFRKQSNMVQNNSSQLSGCVDKNETTNLKDISAMWQDTDLDYISETEAQRVNDKSSSKHTDINEESTEMGNVNEEREIFQKNNCVEFTSTNLCRNANKIPLVSSFSVSTQDNFSNFAGFSSAGGKKINISNEALIRAAKLFSNLDAAAADDDDMFKPTEINSRSHYSDRYKTSRRDVSRCVAEGDSYCGESVKDANIEYQNTLKNNEENINTFMKIYGENQGENTTNISENDRVSSSTKISNLGVIKYSVYKMENGLSSSENNNPSLNISKKLHESDTQSQYSLQEGLSDLTCLAEVSKTEEILTLNISDDPSKSEQKIKNVDFRTASSSNRSVSQAPLDKFHLFETCTEKELNNISSNSNSQMTHSINKKERNATSRKRNINVNQNKSRIGSGHQQISIQQDTDFERKNIEENNGFHTANGKKIIITDESLSKAKQFFAEENVCPENMDNIGNFEDSEFHPCNKDFIKDCEEFAENTPNYDQEMLTLTVGDQGVKFVGPGSTSALRKSEVVISQKRDPKPELISKTTFGFNTASGKRVLVSENAFQKVKQVFNNSKYHFADRLSSRQDPVIALKSSINYAGANKATDTVCLKPKIQDTHNEELDLTNSYPVEIKALQNICNIEIPVCVPRSEKDEHLTLINSFTFAEDTQLFKKEHHSLTRMEIEAVSCNTPTKTKLDVFHLKCSQSSEEYLETEAVESAKAFMEDKFTNSGIENDTKKSLFICRKIDKNCPLNIRTGKRHMEERASLGEPPIKRQLLPEFDRTENPHKSLKASKSTPDGMIKDRRKFMYHIPLKPETCVPFSATKERQEIKNPNITVLDQDFKGYKPKSDVFQHHLLRQSLSGSSGFFTPFKKISTEESEKRKNLPLLSKTAKTFVPPFKVKSAISTHQHHVSKRLDSLINTTMNRDKELKDITMQQSTSETEVQSQEKDYTKQVAPCNLRNNVDGDSDLMEMIANLHYVRNLQEMRIRKKQRQNIHPQPGNLYLMKTSAAKRISLKAAVEEKTPSTYSMEQLYMYGVSKDCIKVNSINAESFQFLILDFFSKEYLVAERGIQLADGGWLIPTDKGMAGKEEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPQEFANRCLTPERVLFQLKYRYDLEIDKSQRSAIKKIVERDDTPAKTLILCVSKIILLNANMPDVCSNKTIVENKKEAAIIEVTDGWYCIRALLDPPLQALLHGRRLTVGQKIIVHGAELVGSQDACTPLEIPDSLMLKISANSTRRARWHAKLGFHQDPRPFPLPLSSLFGEGGTVGCIDIVIQRTYPIQWVEKMPTGSYVFRNGRAEEREAAKHAENRQKHLEALFSQIQMEFEQHEDKPHKRALRSHTLTREQIRILEDGAELYEVIQNASDPSYVEGYLSEEQLKALNTHRQILNDKKQSEIQAEFKKAIESAEREERGCSKRDVSTVWKLRVIDYRKRETDKAIILSIWRPLSDICSLLKEGGRYRIYQLTASRSKGKPDAVNCTLTATKKTQYLQLQASQEVLLEIYIPRKALQFSMLLDPSFRPSCAEVDLVGFIISVSKKTGFTTLVYLSDEDHNLVAIKFWTDLKQLAIEDIINPFTLISASNLQWRSEFKSDIPTLFAGDLSIFSASPKDSYLQERLNKLKNTTENLSCFCSDAEHKLMKFLQKNSPQQYNLPKECGLDPLSPSWKSGLDTGNKPLISSPSSEIKCQSSLSTSKHDLKLVLRSSAKMTPHISYSKESPKNCKKRRKALDLLSQIPSPPPVTPINSFVSPSLKKAFQPPRSSGVQYDASLKRTNHNSDHINSFKGVNETDSLPNNDLVADEELAMINTQVLLYNFQEGKKTDCVGESTNPSDHLLLKNNCLMSLMETKTSQNSTDGAAALEKDTRETEGSLPVQKKLQRQRKRKCY</mol_seq> | |
407 </sequence> | |
408 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pelodiscus_sinensis</property> | |
409 </clade> | |
410 </clade> | |
411 </clade> | |
412 <clade branch_length="0.103262"> | |
413 <confidence type="bootstrap">93</confidence> | |
414 <taxonomy> | |
415 <scientific_name>Mammalia</scientific_name> | |
247 <id>40674</id> | 416 <id>40674</id> |
248 <scientific_name>Mammalia</scientific_name> | 417 <common_name>Mammals</common_name> |
249 </taxonomy> | 418 </taxonomy> |
250 <clade branch_length="0.30595"> | 419 <clade branch_length="0.308145"> |
251 <confidence type="bootstrap">100</confidence> | 420 <confidence type="bootstrap">100</confidence> |
252 <confidence type="duplication_confidence_score">1.0000</confidence> | 421 <confidence type="duplication_confidence_score">1.0000</confidence> |
253 <taxonomy> | 422 <taxonomy> |
423 <scientific_name>Ornithorhynchus anatinus</scientific_name> | |
254 <id>9258</id> | 424 <id>9258</id> |
255 <scientific_name>Ornithorhynchus anatinus</scientific_name> | 425 <common_name>Platypus</common_name> |
256 </taxonomy> | 426 </taxonomy> |
257 <events> | 427 <events> |
258 <type>speciation_or_duplication</type> | 428 <type>speciation_or_duplication</type> |
259 <duplications>1</duplications> | 429 <duplications>1</duplications> |
260 </events> | 430 </events> |
261 <clade branch_length="0.007695"> | 431 <clade branch_length="0.038906"> |
432 <name>ENSOANG00000030391</name> | |
433 <taxonomy> | |
434 <id>9258</id> | |
435 <scientific_name>Ornithorhynchus anatinus</scientific_name> | |
436 <common_name>Platypus</common_name> | |
437 </taxonomy> | |
438 <sequence> | |
439 <accession source="Ensembl">ENSOANP00000032170</accession> | |
440 <location>Contig35657:828-3008</location> | |
441 <mol_seq is_aligned="0">MEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQEDAARRQDVKSRVLTRKQVRALQDGAELYEAVKSVPDPAYIEVSGSIR</mol_seq> | |
442 </sequence> | |
443 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ornithorhynchus_anatinus</property> | |
444 </clade> | |
445 <clade branch_length="0.00763"> | |
262 <name>ENSOANG00000015481</name> | 446 <name>ENSOANG00000015481</name> |
263 <taxonomy> | 447 <taxonomy> |
264 <id>9258</id> | 448 <id>9258</id> |
265 <scientific_name>Ornithorhynchus anatinus</scientific_name> | 449 <scientific_name>Ornithorhynchus anatinus</scientific_name> |
450 <common_name>Platypus</common_name> | |
266 </taxonomy> | 451 </taxonomy> |
267 <sequence> | 452 <sequence> |
268 <accession source="Ensembl">ENSOANP00000024376</accession> | 453 <accession source="Ensembl">ENSOANP00000024376</accession> |
269 <location>Ultra336:825655-866744</location> | 454 <location>Ultra336:825655-866744</location> |
270 <mol_seq is_aligned="0">MPVEPKERPTFFEIFKARCSNSGDLGPISLNWFEELSLEAPPYNSTTSEDPECKTRSCEPNVFKTPQRKPSTYSQLASTPVIFKNQNVTLPADPSPMKGLDQCSIDPRKDDADNKDSQRSHSMTGTKLQQVNDVPSPFSSFLSESPTVLQRLFTTPQKNKPVICGSLFCTPKLTGFQTPRPISESLGVEVDPDMSWSSSLATPPTLSSTVLLAKDDQVSEAKFADGNTIVSKHKMLQKFLGHGESLRRNGMNTSSGTNVNSETGIMDHELEKILDGSFDDVNSCEDRIEHDSESAWNRSEPQNLEDEVYEAAKDVLPGEGDAHSINYASCKTKEDEGKHFNQIRAAECKDTEHLVENAECAVAHDTEFTSSVAKNKVQQPLESVNDRSSKEEVTSQASEWSQLNLSGFDGTWMEKTPPAHISSLAERLAAKAGGHAASDISLPSTLSPDRAQKVLNIDPLVNTRDDKQCSQPHQDCVLMLKDTTPETFPVASPFQSNRNLMLQKKQDSEKTSEEDFLKSNFLGTNPTDFKDPETPDTRLESHSSLRKDGSRCPPRPDPLAVDSDGNESWPTSDYNPVIWKSTGIISNLKKKTRRFIYAVNSDSSFQEGKTPEHQGSGSPHSSTSSCLEWKSSVDPQTYSRIDPGILFTDLLGASARKECLLPEAHGQILSSPSKVMCGIDCPPPENSFSRSTIVCRELEYNEAKTNDEPHSATSFEACDGSEFQQSHFNDPSKRQRVASIKDKAKAAAGLLARKHSEVEFGKIEHTVHSPEANRTSDVNPSTLGLTPSSKDPPLQSSDIIPRAKESFCKKNLESEFRKNHKVSCVENKASPQLNDIAANNSTGKETEHQTGFSVRILQQAQQRLSDKFTESLRDCQEAISEVTAVKPNYGLNKPLHKDTFLYKALASDTDVMDNTGEICESSYSYLEEPVSESNTSAIYAEMEHKEETQELITQNSFSSKEAPEHFQKGSCSLNQALKMSGEVTLPNKDLNCRNSSSLVLKSKGNNGGNPKKWTRTFEHVLNQSVGCGFQTASNKEIKLSENNLKRSKMLFKDIEEQYPNSIFYAESANTSTTVQEKKLNQNSSRAFDSKPSSTKPNDFLDNISVVNSENTILPLQPLCIQPDLELKHCLTASQKAEITELSTILEETGSQFEFTQFKHQGSTVESNVIALGKNDEDELVNSNNTSDELKGVTFDDSFIPRVRGGNGKFPKQVETSVSSEDKVNIKQQTLYFQKSNSDRNTFADVLGIKENEFRGFHSALGRKMVVSDVALQKAAKLFSDIEEMSDEATSSEAKSKICSSESHISIVSAFETANDKNDKDIEEKGTKSLYKSPTNVENIVSVAKTENWGENMQNKERNDFPFQRPPEISNLRKSTDCNRSEGKYCVHKEGSGVSSIDQHNAVLNMSNQFLNQENTQADEGLSDLTCLEAVKAEEMSSLNISDKVRDVTCNPEWKQMEGTLSSREPQSFQTARGKKILVSTESLKKAHLLFREECPEEESDVFLFPLHQMENRVTNEKMEKYVKEKITTKQSKTPEEAIPGAPENQVMTFQREPNLESERLGEHSIMDFKTASGKNVKISKESLAKVKDIFAEENPTGKQKMSTLQHPETGTSRKRENIPEGFAHTSEALGFPGRIGEEMPDCEDDSNIEKNLFSQNKEELPELLTERGLCNQTIALKTPSTVPLEVKVSGDMEKGTEKNCSASYPELFIGKAKTASALEFCTGHGERISVSEASLFKARKWLSEGDLEGAPRKTDASESMLFSSAADKNMHFKVSPSKNILTLKMNRTDSHERQGSVYPMDGYISKASFSNSKEYAANICNDSVVVNYTAGRKGSTDSQLAFHNLTDANKKYSPVMNEDTNVQSLPDPSEMCSAQNVINIKTSTGKTEFRSTHFELKPATFSPAKTIPISPEAVIKPKEISPTTSNVRLNIGTESEICPTEIVAGNIRTFGSPENITFPHLPDNAAMYIDTAKKEENIADKQALKKTQSLFANTSFEVDLQKSHCQANFRTYDFCQAELGKLPPLGALTRMSQAFNTASGKPVRVSDASLKKAKQVFSAIENHSERLPFVTSFKDTESHPEKVMDESNPNRSEKPQVLQKHSSGFRTGSGKQVRISESALERAKGVLMEFDELDKDDNVAYFSKPNQDVLKASAFHSRVDGDQAEGCILSFPTEKDLSKKLNYSNYYVERKSSEDSRHIQVSRNRDEQLSLVETGQCDNGIAIFKSENLLKIDDGSTLSSRPVQARIDVFPPCSKATESALETEAASSTKAFMEDELMGLGVARPVKQSLFTYPNDEGCIMLHPRTGKRRFEEHDSHGEPSIKRKLLPEFDKTMGKEKSSLKASRSTPEGTMKDRRMCTNHVPLKPVSCGPFSLTKERQEMRNPNLTAPNQEFLSKPNAFQHHTLGRSSSNSPVFRAPFYGVSANKNEKMNPQNISGKPAKVFVPPFKTKAHACTDKQDVSKKCQLQMNKQVNKDGEQKSSLSRHDPGVSGSNTVDAKNDQSHTDSANQETIQAVAEHGEEHSVDTITNLQRARELQEMRIEKKQRQRILPQMGRLYLAKTSGHPRLSLKTAVEGRAPSKYSTKELYMCGVSKHCLRVNSKNAESFQFCSQDCFSRECWSAGNGVQLADGGWLIPTNAGKAGKEEFYRALCDTPGVDSKLISRPWVFNHYRWIIWKLAAMEVTFPKQFANRCLTPERVLLQLKYRYDVEIDKSQRSAIKKITERDDSAAKTLVLCISEIISPSTSAAATASKTNNSVLTQKEGAVIHVTDGWYSLRALLDPPLLVLLQAGKLMVGQKIVLFGAELVGPSNACTPLEAPEDLMLKISANSTRPARWYAKLGFQPDPRPFPLSLSSLFKDGGNVGCVDVVIQRAYPTQWMEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQEDAARRQDVKSRVLTRKQVRALQDGAELYEAVKSVPDPAYIEAYFSKEQLKALSSHRQMLSDQKQAQIEMEFRKALELAEEGEEGWARRDVTAIWKLRVVDYRKPGKDAAMLNIWRPLSDMYSLLKEGSRYRIYHTAPSQSKSRSGRASVQLTATKKTQYQLLPASHEILFRIYRPREVLQFGKLLDPALWPPWTEMDLVGFVISVTKRAGLAPLVYLSDECHNLLAIKFWTDLNEDIVKPHALIAASNLQWKSETTSGICTLCAGELSAISANPKEIHFQETFNKLKSTIQDVIQFCSHAENKLRNVLLLSDPSWSHRAADGSLEPPTPHGRFDLVSLPQLQVTVTYSFIQMPPKSEAGPSPAAAASALGSGTLTPQPGWRGAAGPAAPKTCKKRKALEYLSRIPSPPPVSPLCASVSPALKKAFQPPRCCGIRPSTPVQRPSSPREGSAQSPPPLEGDLVTDEELASINTQALLAGLAEDNTVTAGPPGLKADAPDSPLEKGRLSPNCSAGADLAGNHADEARGMATSQQKLRR</mol_seq> | 455 <mol_seq is_aligned="0">MPVEPKERPTFFEIFKARCSNSGDLGPISLNWFEELSLEAPPYNSTTSEDPECKTRSCEPNVFKTPQRKPSTYSQLASTPVIFKNQNVTLPADPSPMKGLDQCSIDPRKDDADNKDSQRSHSMTGTKLQQVNDVPSPFSSFLSESPTVLQRLFTTPQKNKPVICGSLFCTPKLTGFQTPRPISESLGVEVDPDMSWSSSLATPPTLSSTVLLAKDDQVSEAKFADGNTIVSKHKMLQKFLGHGESLRRNGMNTSSGTNVNSETGIMDHELEKILDGSFDDVNSCEDRIEHDSESAWNRSEPQNLEDEVYEAAKDVLPGEGDAHSINYASCKTKEDEGKHFNQIRAAECKDTEHLVENAECAVAHDTEFTSSVAKNKVQQPLESVNDRSSKEEVTSQASEWSQLNLSGFDGTWMEKTPPAHISSLAERLAAKAGGHAASDISLPSTLSPDRAQKVLNIDPLVNTRDDKQCSQPHQDCVLMLKDTTPETFPVASPFQSNRNLMLQKKQDSEKTSEEDFLKSNFLGTNPTDFKDPETPDTRLESHSSLRKDGSRCPPRPDPLAVDSDGNESWPTSDYNPVIWKSTGIISNLKKKTRRFIYAVNSDSSFQEGKTPEHQGSGSPHSSTSSCLEWKSSVDPQTYSRIDPGILFTDLLGASARKECLLPEAHGQILSSPSKVMCGIDCPPPENSFSRSTIVCRELEYNEAKTNDEPHSATSFEACDGSEFQQSHFNDPSKRQRVASIKDKAKAAAGLLARKHSEVEFGKIEHTVHSPEANRTSDVNPSTLGLTPSSKDPPLQSSDIIPRAKESFCKKNLESEFRKNHKVSCVENKASPQLNDIAANNSTGKETEHQTGFSVRILQQAQQRLSDKFTESLRDCQEAISEVTAVKPNYGLNKPLHKDTFLYKALASDTDVMDNTGEICESSYSYLEEPVSESNTSAIYAEMEHKEETQELITQNSFSSKEAPEHFQKGSCSLNQALKMSGEVTLPNKDLNCRNSSSLVLKSKGNNGGNPKKWTRTFEHVLNQSVGCGFQTASNKEIKLSENNLKRSKMLFKDIEEQYPNSIFYAESANTSTTVQEKKLNQNSSRAFDSKPSSTKPNDFLDNISVVNSENTILPLQPLCIQPDLELKHCLTASQKAEITELSTILEETGSQFEFTQFKHQGSTVESNVIALGKNDEDELVNSNNTSDELKGVTFDDSFIPRVRGGNGKFPKQVETSVSSEDKVNIKQQTLYFQKSNSDRNTFADVLGIKENEFRGFHSALGRKMVVSDVALQKAAKLFSDIEEMSDEATSSEAKSKICSSESHISIVSAFETANDKNDKDIEEKGTKSLYKSPTNVENIVSVAKTENWGENMQNKERNDFPFQRPPEISNLRKSTDCNRSEGKYCVHKEGSGVSSIDQHNAVLNMSNQFLNQENTQADEGLSDLTCLEAVKAEEMSSLNISDKVRDVTCNPEWKQMEGTLSSREPQSFQTARGKKILVSTESLKKAHLLFREECPEEESDVFLFPLHQMENRVTNEKMEKYVKEKITTKQSKTPEEAIPGAPENQVMTFQREPNLESERLGEHSIMDFKTASGKNVKISKESLAKVKDIFAEENPTGKQKMSTLQHPETGTSRKRENIPEGFAHTSEALGFPGRIGEEMPDCEDDSNIEKNLFSQNKEELPELLTERGLCNQTIALKTPSTVPLEVKVSGDMEKGTEKNCSASYPELFIGKAKTASALEFCTGHGERISVSEASLFKARKWLSEGDLEGAPRKTDASESMLFSSAADKNMHFKVSPSKNILTLKMNRTDSHERQGSVYPMDGYISKASFSNSKEYAANICNDSVVVNYTAGRKGSTDSQLAFHNLTDANKKYSPVMNEDTNVQSLPDPSEMCSAQNVINIKTSTGKTEFRSTHFELKPATFSPAKTIPISPEAVIKPKEISPTTSNVRLNIGTESEICPTEIVAGNIRTFGSPENITFPHLPDNAAMYIDTAKKEENIADKQALKKTQSLFANTSFEVDLQKSHCQANFRTYDFCQAELGKLPPLGALTRMSQAFNTASGKPVRVSDASLKKAKQVFSAIENHSERLPFVTSFKDTESHPEKVMDESNPNRSEKPQVLQKHSSGFRTGSGKQVRISESALERAKGVLMEFDELDKDDNVAYFSKPNQDVLKASAFHSRVDGDQAEGCILSFPTEKDLSKKLNYSNYYVERKSSEDSRHIQVSRNRDEQLSLVETGQCDNGIAIFKSENLLKIDDGSTLSSRPVQARIDVFPPCSKATESALETEAASSTKAFMEDELMGLGVARPVKQSLFTYPNDEGCIMLHPRTGKRRFEEHDSHGEPSIKRKLLPEFDKTMGKEKSSLKASRSTPEGTMKDRRMCTNHVPLKPVSCGPFSLTKERQEMRNPNLTAPNQEFLSKPNAFQHHTLGRSSSNSPVFRAPFYGVSANKNEKMNPQNISGKPAKVFVPPFKTKAHACTDKQDVSKKCQLQMNKQVNKDGEQKSSLSRHDPGVSGSNTVDAKNDQSHTDSANQETIQAVAEHGEEHSVDTITNLQRARELQEMRIEKKQRQRILPQMGRLYLAKTSGHPRLSLKTAVEGRAPSKYSTKELYMCGVSKHCLRVNSKNAESFQFCSQDCFSRECWSAGNGVQLADGGWLIPTNAGKAGKEEFYRALCDTPGVDSKLISRPWVFNHYRWIIWKLAAMEVTFPKQFANRCLTPERVLLQLKYRYDVEIDKSQRSAIKKITERDDSAAKTLVLCISEIISPSTSAAATASKTNNSVLTQKEGAVIHVTDGWYSLRALLDPPLLVLLQAGKLMVGQKIVLFGAELVGPSNACTPLEAPEDLMLKISANSTRPARWYAKLGFQPDPRPFPLSLSSLFKDGGNVGCVDVVIQRAYPTQWMEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQEDAARRQDVKSRVLTRKQVRALQDGAELYEAVKSVPDPAYIEAYFSKEQLKALSSHRQMLSDQKQAQIEMEFRKALELAEEGEEGWARRDVTAIWKLRVVDYRKPGKDAAMLNIWRPLSDMYSLLKEGSRYRIYHTAPSQSKSRSGRASVQLTATKKTQYQLLPASHEILFRIYRPREVLQFGKLLDPALWPPWTEMDLVGFVISVTKRAGLAPLVYLSDECHNLLAIKFWTDLNEDIVKPHALIAASNLQWKSETTSGICTLCAGELSAISANPKEIHFQETFNKLKSTIQDVIQFCSHAENKLRNVLLLSDPSWSHRAADGSLEPPTPHGRFDLVSLPQLQVTVTYSFIQMPPKSEAGPSPAAAASALGSGTLTPQPGWRGAAGPAAPKTCKKRKALEYLSRIPSPPPVSPLCASVSPALKKAFQPPRCCGIRPSTPVQRPSSPREGSAQSPPPLEGDLVTDEELASINTQALLAGLAEDNTVTAGPPGLKADAPDSPLEKGRLSPNCSAGADLAGNHADEARGMATSQQKLRR</mol_seq> |
271 </sequence> | 456 </sequence> |
272 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ornithorhynchus_anatinus</property> | 457 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ornithorhynchus_anatinus</property> |
273 </clade> | 458 </clade> |
274 <clade branch_length="0.039107"> | |
275 <name>ENSOANG00000030391</name> | |
276 <taxonomy> | |
277 <id>9258</id> | |
278 <scientific_name>Ornithorhynchus anatinus</scientific_name> | |
279 </taxonomy> | |
280 <sequence> | |
281 <accession source="Ensembl">ENSOANP00000032170</accession> | |
282 <location>Contig35657:828-3008</location> | |
283 <mol_seq is_aligned="0">MEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQEDAARRQDVKSRVLTRKQVRALQDGAELYEAVKSVPDPAYIEVSGSIR</mol_seq> | |
284 </sequence> | |
285 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ornithorhynchus_anatinus</property> | |
286 </clade> | |
287 </clade> | 459 </clade> |
288 <clade branch_length="0.044879"> | 460 <clade branch_length="0.04529"> |
289 <confidence type="bootstrap">98</confidence> | 461 <confidence type="bootstrap">98</confidence> |
290 <taxonomy> | 462 <taxonomy> |
463 <scientific_name>Theria</scientific_name> | |
291 <id>32525</id> | 464 <id>32525</id> |
292 <scientific_name>Theria</scientific_name> | 465 <common_name>Marsupials and Placental mammals</common_name> |
293 </taxonomy> | 466 </taxonomy> |
294 <clade branch_length="0.153103"> | 467 <clade branch_length="0.157772"> |
295 <confidence type="bootstrap">86</confidence> | 468 <confidence type="bootstrap">45</confidence> |
296 <taxonomy> | 469 <taxonomy> |
470 <scientific_name>Marsupialia</scientific_name> | |
297 <id>9263</id> | 471 <id>9263</id> |
298 <scientific_name>Marsupialia</scientific_name> | 472 <common_name>Marsupials</common_name> |
299 </taxonomy> | 473 </taxonomy> |
300 <clade branch_length="0.08857"> | 474 <clade branch_length="0.091393"> |
301 <name>ENSMEUG00000010691</name> | 475 <name>ENSMODG00000009516</name> |
302 <taxonomy> | 476 <taxonomy> |
303 <id>9315</id> | 477 <id>13616</id> |
304 <scientific_name>Macropus eugenii</scientific_name> | 478 <scientific_name>Monodelphis domestica</scientific_name> |
479 <common_name>Opossum</common_name> | |
305 </taxonomy> | 480 </taxonomy> |
306 <sequence> | 481 <sequence> |
307 <accession source="Ensembl">ENSMEUP00000009812</accession> | 482 <accession source="Ensembl">ENSMODP00000033276</accession> |
308 <name>BRCA2-201</name> | 483 <name>BRCA2-201</name> |
309 <location>GeneScaffold_5009:8209-57002</location> | 484 <location>4:304116271-304197558</location> |
310 <mol_seq is_aligned="0">KDNSQKSRYIMKTKLGQANDVTSPPFSACLSESPVVLRGPYRTPQREKPVAYGNLFYTPKLMKVNTSKHISESLGAEVDPEMSWSSSLATPPTLSSTVLIVRDGQTSEARIPNDTTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKMIDDSFGDGNNFEDHDGKMMRNMPNVMEDEVCDPDIDIPIEDDALFSFPGYKVGSLRKVKLDKTRKKYFKIKTNECEETKNMKDKYSSTSEAELTDPSISDITKNEIQTHVENVNEELLKDDVPCLATQWSQLNLSDLDVTQIEKTPLPHTSFCDQIQEKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLDDLSSKKDLNLSHSLTASQKAEITELSTILEETGSQFEFTQFQKQNPIVQTLEISESQMSSLNTYEVQNTVELDVILEKNEIDNNRFEVVINVKQKTVGLPKSNSGQVIFTDSFTENKVEFKGFCSALGRKMNISNEALQKAMKLFSDIEEISKETSAFKNDSLDRNHKSNVVPTFKIAKYNNKILNKDVKYVHKPQNNVENNTDILEENTLNCSREPENKKECTSSHKDNGKLKESIVPNSDNTQREINGLSLIGQQNMHLRKSNQFIKQENYQIKEEFLDLTCLGEAVKDKEVYLYKEQLVSNQKEPKIRENENSCDLQHFQTANGKNIMVSKESFNKVTHLFAEECSVKELSNFSFDFESNVLTMEPSGKKEKNLVESETEEMTLGATKSQLISIQQGPKIENKKLKEHGMVGFHTASGKKVIISKESLAKVKHFFVEENLENDVTSIKNLETELFKEREKVNEKHGQAYEMVKSNNAQVWEEMQSYQGDNGKVLISVTTADLPKITDYSPLKPSNSVLFEEKLSENKEAKKIVYCHTKQSTGLPVEVSALGFYTGHGKSVFLSETSLLAARKCIRERFKSEKADSDVDAKKLVPLNTSNDTSSVEDKNCISDKQDSANLNNSMSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMKRKLLHEFDRVVENQEKSLPSKSSDGTMKDRRMFMHHISLKPVTCDPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYMYGVSKQCLRINSKNSESFKFHSQDYFSKEYLLDGKGIQLADGGWLIPSDKGKLGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTSTTANSKNSNVDTKRESAVIEVTDGWYAVKALLDIPLSVLLHRGKLTVGQKIITHGAELIGSQEACPPLEAPASLMLKLSANSTRPARWYAKLGFFSDPRPFPLPLSSLFGEGGNVGCVDVVVQRVYPTQWMEKTASGLYIFRNERAEEEALKHAECQQKKLEVLLTKVQQFKHEENSARQYGLSRILTRHQVRALQDGADLYEAVKNAPDPAYIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPLVYLSDEYYNLLAVKFWIDLNEDIIKLHTLIAASNLQWKAESRSGIPTLFAGEFSSFSASPKESHFQEIFNKLKSSVENINQFCNDAESKLIHLINTYNSKQPNAVKEYNLDSPSPQARLGLVRVISTSHSEPSHHCPEGDSGLITSSVKITPTSDCKGDRKMDDARICKKRRSLDFFSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGNNYSKPIKKSTLNSSQVTTLKTFSGTNMVENDLIADEELALINTQALLSNSPEKLIMDGFTSREPSGSGEHWVLKKDCPKLIEVENISQTSTEETRITRDKNEI</mol_seq> | 485 <mol_seq is_aligned="0">MSAGYQGKTTFFEVFKTRCSESDLGPISLNWFEELTSEAPPYNYEISEDPGSKTEITEVNYFKTPQRKPFTYNQLASTPLIFKEQNVNCSLNSSPLSGPDHCKLDLGKDTAMDKELRKSHCVLKTKLGQANDVTSPPLSTCLSESPAVLRGAYRTPQREKPVAYGNLLYTPKLMKVNTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDGQTPGARTPDDTTIMLQKYLSQHGERPKRLDRSTSSVPNIENIHAEGYGTSQELEKMIDDSFDDGNNFKDHGGKMINMPNIMEEEICDPIINTPVEDDASFNFTGYIVGNLRKVKCDKTRKKYSKTKTNEYEDTKNLSKKENYSSASETELEYCYPLISKAENNEIQKSIKNVNEEMLEDDVPSSATQWSQLNLSGLDVTQIEKTPLPHISFCVQNSEERPANESNECSSLSTLKTVEIAAYKEDEEKITTPNKGSVMLLKQISPEISPPNAISQDRKNSKFKMRQTSEETVSMDFLECSSLCTVNASITTEAKVFENKLENPKSSLDDIICPEKHGLLSPNTDGKGSCATVSKRNSAPLNSTGIISHFKKRTKKFIYVVNNDSSYQGEKIQKTQEFGSVNCSASSHLELNSFEEHHEFTNAISDFLDSSIRRKCSQFDPKEETAPLTECDKTMMEEYFHESRFPHNEVTSQDLGFREVEMNKGELESDITETDNQSQSQERSYNDFSKRQRDSHVKECILTATCLSPRKHTEIELGNIAENSHFTTKNSTLHDSVDTSINSLTQLPQDPQELSVVIYGKKEPLCKVKQKLRFRRNSDSTFITNKVRSELKESFGNKGNQETEVLNEILGDDRELSSEKCKEMTSVSLGAQVNKNAGLFVSLRDQENTNLITEKTAIELYSEEDLHFNEENFIFQTIDKKNIRVTDSSEEFFATSFCYLEESIPKNSTEIDYKQTVQELFMEDSFSSEMVPVFTRDSQDKNQNSKLACECISQSKSSYSKSTIDTNMKPKRNEENYLGKWAQNFDPDSNKSFGCGFKTASNKEIILSEHNIKKGKLFFKDIEQYYNSSSVEVVNSSISVAAENIKTDSDSKKQEKNSFPAWKSEPSHIISKDVQSNIFVLNEKEIDPALEDLCSEKDLDLNHSLTASQKAEITELSTILEETGSQFEFTQFRKQSSTVQTLDISTNKADELGNLNTFELQMGVELGDHFGAEYETDNNRSPVQVDLNVNSEVVINVKQRTVYLPKSNSEQGASTDIFTESEFKGFCSALGRKMNVSNEALQKAMKLFSDIEEIGEGTPLQNLRNGPLDRSQKSNIVPAFKIANYANNSKDFKGKDAKPQSNAENNTGIFVEENMLNCSRDPENKQSSSPLFISSHKDSSKLKGSVEPDSDNSQREKNDLSSIDQQNYPKMSIQLIRQENYPVKGGLLDLNCLGKAVKDEKIFASNVSGIEELVSNQEEQKMRENENSSHLQSFQTASGRNIMVSKDSFSKVAHLFAEECSVKELNDFSFPFTLKMLNTALNKSVESSGKKSENLAENEIEEMAVATKKELMPIQKGPKIENKKWKEYNMVGFHTASGKEVTISKESLTKVKHFFVEESLENDVTNIKNLETEFLNEREKINEKLVQAYEMVKLNNSQVCEEMQSFQDNDEKVLPVRTTDLPKITDSILSNEPSNNVLFEEKLSEIKENCILSDAKQSTGLPVEMSGLGFYTGHGKSVPVSETSLLEARKWLKEIDLGGKTKASGMFVSSVDVKEDSDIHVKKSVPLYTSNNTSSIDDKNISDKQDAVFLSNSMSSIKHNLKHDTEGSDFCHSDDADFFSEHISDKVMSCLKAQPPAFTTASGKTVHISNEAVQKAREMFINNGDKFLKPNIENKSENNQMKNVKDPSKILENKDISPKSFDGKKRNLSVNEGSFSNKIYSKKAQLENISAGIALEMDSEVSHCQINSKTSDLYKSTIGKQPKGSSSVGIFCTANGKPVQVSDNSLKKARQVFSEIANDSEQLLSIKGSENHPETLIGEENAMLYAKINLPAQKDYLSNMQNLYNNSGFNTASGKQVLISESALQKVKGMLVEFDLMRNECLESIQDVTPKGLSPVLCIEGSETPKHIVNSKSKEICNKELHFSNNCNVEISSSENSRIIEVSCAQFKQDMIHPLLETKLTPAKEILFLKKGQVGLKDVDMESSEAIDGLPVKRNLQVSSPNSKAQETSMEREAVEIAKAFMQDDEFTDSELPHNAKQSFFTYKNNEERILTNSRFGKRRMEERASYGEPPIKRKLLYEFDRAVENQAKSLKPSKSSPDGTMKDRRKLMHHISLKPVTCDPFSTAKEWRQMRYPNFTAPGQELTSKYHFLKHQTLENSSHNLLLQSPSYKDSSTDNGKVKSISVRGKPAKVFVPPFKTNSNSSTATDDEFIRKRLKVKVKEYTPENEKQKYGDAHNSGDSENNENYLSDKDNSNQATTDIFKECGNLHLEMIENLQHAREMQDMRIKKKQTQKIHPQAGSLYLRKTSTLPRSSLRVVVEGKVPSTYSSKQLYMYGITKQCLRINSKNSESFKFHSEDYFSKEHLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPEWVLLQLKYRYDIEIDESRRSAIKKIMERDETPAKTLVLCVSEIISSGTNISITANSKNNSVETKKESAVIEVTDGWYAIKALLDSSLLAILQKGKLTTGQKIITHGAELIGSQEACTPLEAPESLMLKLSANSTRPARWYAKLGFFSDPRPFPLPLSSLFSEGGNVGCVDIVVQRVYPTQWMEKTLSGSYIFRNERAEEKEALKYAECQQKKLEALLTKIQAEFEKHEENSATQHRQSHILTRQQVRALQDGADLYEAVKNAPDPAYVEGCFSKEQLRTLNHHRQILNDKKQEQLQAEFRKAIAAAELEEHGLAKRDVTTVWKLRVVNYKKHEKDSVILSIWRPLSDIYALLKEGNRYRIYNLATSPSKSKSDRAHIRLTATKKTQYQQLPVSHEALSQVYQPREAVPLDKLMEPSFRPLCAEVDVVGVVISVTKKPGVAPLVYLSDEYYNLLAVKFWIDLNEDVIKLHTLIAASNLQWKTESRAGIPMLFAGEFSVFSASPKQSHFQERFNKLKNSVENIDLFCDGAEKKLSHLLDTHNSKQPNAVREYNLDSPQAKLGLGPMISPFHRERNHHCPEGNSGATISSVKISPTSDCRGDRKMDDPKICKKRRSLDFLSRLPLPPPISPIRTFVSPAAQKAFQPPRSCGNKYNVPVKKNTSNSPQMTIKTLSGTTMAENDLIADEELALINTQALLPNSSE</mol_seq> |
311 </sequence> | 486 </sequence> |
312 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">macropus_eugenii</property> | 487 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">monodelphis_domestica</property> |
313 </clade> | 488 </clade> |
314 <clade branch_length="0.013978"> | 489 <clade branch_length="0.018571"> |
315 <confidence type="bootstrap">86</confidence> | 490 <confidence type="bootstrap">45</confidence> |
316 <taxonomy> | 491 <taxonomy> |
492 <scientific_name>Marsupialia</scientific_name> | |
317 <id>9263</id> | 493 <id>9263</id> |
318 <scientific_name>Marsupialia</scientific_name> | 494 <common_name>Marsupials</common_name> |
319 </taxonomy> | 495 </taxonomy> |
320 <clade branch_length="0.098879"> | 496 <clade branch_length="0.089576"> |
497 <name>ENSMEUG00000010691</name> | |
498 <taxonomy> | |
499 <id>9315</id> | |
500 <scientific_name>Macropus eugenii</scientific_name> | |
501 <common_name>Wallaby</common_name> | |
502 </taxonomy> | |
503 <sequence> | |
504 <accession source="Ensembl">ENSMEUP00000009812</accession> | |
505 <location>GeneScaffold_5009:8209-57002</location> | |
506 <mol_seq is_aligned="0">KDNSQKSRYIMKTKLGQANDVTSPPFSACLSESPVVLRGPYRTPQREKPVAYGNLFYTPKLMKVNTSKHISESLGAEVDPEMSWSSSLATPPTLSSTVLIVRDGQTSEARIPNDTTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKMIDDSFGDGNNFEDHDGKMMRNMPNVMEDEVCDPDIDIPIEDDALFSFPGYKVGSLRKVKLDKTRKKYFKIKTNECEETKNMKDKYSSTSEAELTDPSISDITKNEIQTHVENVNEELLKDDVPCLATQWSQLNLSDLDVTQIEKTPLPHTSFCDQIQEKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLDDLSSKKDLNLSHSLTASQKAEITELSTILEETGSQFEFTQFQKQNPIVQTLEISESQMSSLNTYEVQNTVELDVILEKNEIDNNRFEVVINVKQKTVGLPKSNSGQVIFTDSFTENKVEFKGFCSALGRKMNISNEALQKAMKLFSDIEEISKETSAFKNDSLDRNHKSNVVPTFKIAKYNNKILNKDVKYVHKPQNNVENNTDILEENTLNCSREPENKKECTSSHKDNGKLKESIVPNSDNTQREINGLSLIGQQNMHLRKSNQFIKQENYQIKEEFLDLTCLGEAVKDKEVYLYKEQLVSNQKEPKIRENENSCDLQHFQTANGKNIMVSKESFNKVTHLFAEECSVKELSNFSFDFESNVLTMEPSGKKEKNLVESETEEMTLGATKSQLISIQQGPKIENKKLKEHGMVGFHTASGKKVIISKESLAKVKHFFVEENLENDVTSIKNLETELFKEREKVNEKHGQAYEMVKSNNAQVWEEMQSYQGDNGKVLISVTTADLPKITDYSPLKPSNSVLFEEKLSENKEAKKIVYCHTKQSTGLPVEVSALGFYTGHGKSVFLSETSLLAARKCIRERFKSEKADSDVDAKKLVPLNTSNDTSSVEDKNCISDKQDSANLNNSMSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPMKRKLLHEFDRVVENQEKSLPSKSSDGTMKDRRMFMHHISLKPVTCDPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYMYGVSKQCLRINSKNSESFKFHSQDYFSKEYLLDGKGIQLADGGWLIPSDKGKLGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTSTTANSKNSNVDTKRESAVIEVTDGWYAVKALLDIPLSVLLHRGKLTVGQKIITHGAELIGSQEACPPLEAPASLMLKLSANSTRPARWYAKLGFFSDPRPFPLPLSSLFGEGGNVGCVDVVVQRVYPTQWMEKTASGLYIFRNERAEEEALKHAECQQKKLEVLLTKVQQFKHEENSARQYGLSRILTRHQVRALQDGADLYEAVKNAPDPAYIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPLVYLSDEYYNLLAVKFWIDLNEDIIKLHTLIAASNLQWKAESRSGIPTLFAGEFSSFSASPKESHFQEIFNKLKSSVENINQFCNDAESKLIHLINTYNSKQPNAVKEYNLDSPSPQARLGLVRVISTSHSEPSHHCPEGDSGLITSSVKITPTSDCKGDRKMDDARICKKRRSLDFFSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGNNYSKPIKKSTLNSSQVTTLKTFSGTNMVENDLIADEELALINTQALLSNSPEKLIMDGFTSREPSGSGEHWVLKKDCPKLIEVENISQTSTEETRITRDKNEI</mol_seq> | |
507 </sequence> | |
508 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">macropus_eugenii</property> | |
509 </clade> | |
510 <clade branch_length="0.083038"> | |
321 <name>ENSSHAG00000010421</name> | 511 <name>ENSSHAG00000010421</name> |
322 <taxonomy> | 512 <taxonomy> |
323 <id>9305</id> | 513 <id>9305</id> |
324 <scientific_name>Sarcophilus harrisii</scientific_name> | 514 <scientific_name>Sarcophilus harrisii</scientific_name> |
515 <common_name>Tasmanian devil</common_name> | |
325 </taxonomy> | 516 </taxonomy> |
326 <sequence> | 517 <sequence> |
327 <accession source="Ensembl">ENSSHAP00000012162</accession> | 518 <accession source="Ensembl">ENSSHAP00000012162</accession> |
328 <name>BRCA2-201</name> | 519 <name>BRCA2-201</name> |
329 <location>GL849705.1:683545-750243</location> | 520 <location>GL849705.1:683545-750243</location> |
330 <mol_seq is_aligned="0">CFLTDLGPISLNWFEELTSEAPPHNYEISEDHGSKTEIIELNSFKTPQRKPFTYNQLASTPLIFKEQNVNFSLYSSPLRGPDHCKLDLGKDNAVDKELRKSHCLIKTKLGQANDATSPLLSACLSESPVVLRGTYRTPQREKPVAYGNLFYTPKLMKVNTSKHISESLGAEVDPDMSWTSSLATPPTLSSTVLIVRDGQTSGARTPNDTTIMLQKSLSQHGESPKRLDRTTSSVPNIENTHAESSVTSQELEKMINDSFGDGNSFEDLDGKMMKNIPNVMEDEMCGPVIDTPDDDASYSFPDYKIGSLRKVKLDKTRKKYFKMKTNECEETERLNKDRYSNISETELEYCYPSISKVTKNEIQKPIENINEELLKDDVPSSATEWSQLNLSGLNVTQIEKTPLPHLSFCDEDSRERSANSNSECSNLITLKKLEISTCEEDEGKITIPQKETVLLLKKSSPEISPLKSLSQNRKSSTFEMGQTSEKTISVDYSSFCTVNTNITTESKILGNKLENPNSSVNDIVCSGEHSFLYPNTDDKRHCPTITKCNSSSLNSIGIISHFKKKTKKFIYVVNDDSSCQDENIQKSQEIDSMNCSESSHLEMSSSGMHPEFTDAVSDFLDSSVKRKCLQFNPEEETVSLTGCDKTVLEEYFNESSFPQNEVTSQGVDFKEVKIKKGDLESTVTEAEKKDHNNASKNPIVSNIKERALAKKYTEIELGNIGQNIHLTTKNRTLNGSTNSIINTLTQLPQDPPEFSVVTDEEKEPLCKMKQKLRFRRNSDSTFVTNKVNSEFPNSHFKKNQETDILNQISGESQQMSSEKCKEISSISLGTQVNRNTDLFVSLRDQEKTILLTGKTALETYPKEHLPLNKSNFLFQTTEKKHMQIMDSSEELETNFCYLGEPISEKSTEIDCKQTVQELCTEDSFLLKVIPEFTGDSQNKNQSPKLAYEYTAPCKNLYSKRTIDANVKSKTNEDNYLGKWTGNFDPDLNKNFGSGFKTASNKEIILSDNNINKGKLFFKDIEQHDNNCSSVEIMNTSVAENVKIDLDTKNHIKNSTSGWNSEASHAISKDIQDNIFVINKKDTNVTLENLALKKDLDLNHSLTASQKAEITELSTILEETGSQFEFTQFKKQSPTIQILEISTNKTGNQLDNLNTYDVQRTFELDGYFGAKNEISNSRTPDLNVNSEMVINIQQETASLSRQVNSTDTFTENEMEFKGFCSALGRKMTVSNEALQKALKLFSDIEEIGEEVPLQNFRNSSLERSHKSNIVPTFKIANHNNNEDFKGKEAKCVPKPQNNIEDYTDIFVEEKVVNSSRDPENIKSSCPLSISSHEDNCTFKRSVPNSNNGLSLNGQQNIHLKMSNQLMKQENYQIKEELLDLTCLGETVKDEEMFTLNISQVEQLISNQKKQKIRENESLHDLQHFQTASGRNIMVSKESFNKVAHLFAKECSVEELNDFSFPSISKMPNVAHNKLTEPSVKEEQNLLESETEEMPFGITKNQLLSIQQEPKIENKKCKDHSMVGFHTASGKKVTISKESLAKVKHFFVEENLKNDVTNIKNIETEFFQEREKANDGQACEMVELNNAQVWEEMPSYQNDDKKILVPFTTADLSKKLDSALSNESSNDILFERKLSENKKSKENCLLSDTKKSTGLPVEISGLGFYTGHGKRISVSETSLLEARKWLRDRDLQDVGGKTEASDMFVSSVDEAIYLKGDPDVQKEKLVPLNALYKTSSVEDDKNCISEEQDSVNLSNNVSDIKHDLKHDPKRSGFYQSDNADFFLEHISDKGMSYLKARPPTFTTASGKTVHISNEAVQKAREMFINDCDKVLKPNIETKLENNEMEVVKYFSETLGNKKDISLKFDAKKRNISTTDIFISNTKCSNLAQLESMSTSTGLEVNSELSHHKINSQTSDLSKSMGRMPKCSSSVGIFCTANGKPVQVSDNSLKKARQVFSEIESNSEQLLSMVPFKNSESHMETLTKEENTTLHAKTNLLSQKKDYLSDMVNSHNNSGFSTASGKQVLISENALKKVKNMLVEFDLMKNESLEQLPEFTQNVTPKVLSPIHCIDGSKNPENVVNSKNEETCNKEFNLSNNCDVETNYLENCTITKVSCNQFKQDEMQTPLETNLMPDQDFSFLKKKQGGPKNVNIEGDVTLNDFLVKESLQVCVSDSKAPENFLEREAMEIANAFMQDDELTDSELPHNARQNFITYKNKEKCMQLNSRFGKRRMEKGASYGEPPIKRKLLHEFDRVVENQEKSLKPSKSSPDGTMKDRRMFMHHIPLKPLICDPFSTTKERQEMRHPNFTAPDQGFTSKSPFFKRQTLGNSSYKSFLGSPLYKIFSTNDGKIQPNTVVNKPSKVFVPPFKTKSNSFTDEQYVSKRLKLKVKDHIQENEKQKYIDGHNTRDSENNENYLTDKDNYNQATTDVFEEFGDSTLVEMNKNLQNARELQDMRIKKKQTQQIYPQAGSLYLTKTSTIPRISLKVAVEGRVPSTYSSKQLYMYGVSKQCSRINSKNAESFQFHSQDYFSKEYLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPERVLLQLKYRYDIEIDKSRRSAIKKIMERDETAAKTLVLCVSEIISSGTNMSIAANNKNSKVDTKKESAVIEVTDGWYAIKALLDIPLLALLHRGKLTVGQKIITHGAELIGSQEACTPFEAPPSLMLKLSANSTRPACWYTKLGFFSDPRPFPLPLSSLFSEGGSVGCVDIVVQRVYPTQWMEKTLSGLYIFRNERAEEKEALKHAECQQKKLEALLTKIQAEFEKHEEENSATQHGLSRILTRQQVRALQDGADLYEAVKNAPDPAYIESQGCFSKEQLRALNNHRQMLNDKKQAQLQSEFRKAVAAAEMEEQGLSKRDVTMVWKLRVINYGKQEKDSVILSIWRPLSDIYSLLKEGNRYRIYHLAASPSKSKSDSTHIRLTATKKTQYQQLPVSHETLFQVYQPREALPLSKLVDPSFQPSFAEVDIVGFVIFITKKPGIAPLVYLSDEYYNVLAIKFWIDLNEDVIKLNTLIAASNLQWRTESRSGIPTLFAGEFSSFSASPKESHFQEAFSKLKSSVENIDLFCNDAESKLTHLHNIHNSKQPNTVKEYNLDSPSPQAKLGLEHVITTSHSEPSHLCPEGNSGLTTSSDKITPTSDCRGNRKMDDPKICKKRRSLDFFSRLPLPPPISPICTFVSPAAQKAFQPPRSCGNNYSSKPNKKNTLNSPPMTTLKTLSGTNMVENDLIADEELALINTQALLSNSSE</mol_seq> | 521 <mol_seq is_aligned="0">CFLTDLGPISLNWFEELTSEAPPHNYEISEDHGSKTEIIELNSFKTPQRKPFTYNQLASTPLIFKEQNVNFSLYSSPLRGPDHCKLDLGKDNAVDKELRKSHCLIKTKLGQANDATSPLLSACLSESPVVLRGTYRTPQREKPVAYGNLFYTPKLMKVNTSKHISESLGAEVDPDMSWTSSLATPPTLSSTVLIVRDGQTSGARTPNDTTIMLQKSLSQHGESPKRLDRTTSSVPNIENTHAESSVTSQELEKMINDSFGDGNSFEDLDGKMMKNIPNVMEDEMCGPVIDTPDDDASYSFPDYKIGSLRKVKLDKTRKKYFKMKTNECEETERLNKDRYSNISETELEYCYPSISKVTKNEIQKPIENINEELLKDDVPSSATEWSQLNLSGLNVTQIEKTPLPHLSFCDEDSRERSANSNSECSNLITLKKLEISTCEEDEGKITIPQKETVLLLKKSSPEISPLKSLSQNRKSSTFEMGQTSEKTISVDYSSFCTVNTNITTESKILGNKLENPNSSVNDIVCSGEHSFLYPNTDDKRHCPTITKCNSSSLNSIGIISHFKKKTKKFIYVVNDDSSCQDENIQKSQEIDSMNCSESSHLEMSSSGMHPEFTDAVSDFLDSSVKRKCLQFNPEEETVSLTGCDKTVLEEYFNESSFPQNEVTSQGVDFKEVKIKKGDLESTVTEAEKKDHNNASKNPIVSNIKERALAKKYTEIELGNIGQNIHLTTKNRTLNGSTNSIINTLTQLPQDPPEFSVVTDEEKEPLCKMKQKLRFRRNSDSTFVTNKVNSEFPNSHFKKNQETDILNQISGESQQMSSEKCKEISSISLGTQVNRNTDLFVSLRDQEKTILLTGKTALETYPKEHLPLNKSNFLFQTTEKKHMQIMDSSEELETNFCYLGEPISEKSTEIDCKQTVQELCTEDSFLLKVIPEFTGDSQNKNQSPKLAYEYTAPCKNLYSKRTIDANVKSKTNEDNYLGKWTGNFDPDLNKNFGSGFKTASNKEIILSDNNINKGKLFFKDIEQHDNNCSSVEIMNTSVAENVKIDLDTKNHIKNSTSGWNSEASHAISKDIQDNIFVINKKDTNVTLENLALKKDLDLNHSLTASQKAEITELSTILEETGSQFEFTQFKKQSPTIQILEISTNKTGNQLDNLNTYDVQRTFELDGYFGAKNEISNSRTPDLNVNSEMVINIQQETASLSRQVNSTDTFTENEMEFKGFCSALGRKMTVSNEALQKALKLFSDIEEIGEEVPLQNFRNSSLERSHKSNIVPTFKIANHNNNEDFKGKEAKCVPKPQNNIEDYTDIFVEEKVVNSSRDPENIKSSCPLSISSHEDNCTFKRSVPNSNNGLSLNGQQNIHLKMSNQLMKQENYQIKEELLDLTCLGETVKDEEMFTLNISQVEQLISNQKKQKIRENESLHDLQHFQTASGRNIMVSKESFNKVAHLFAKECSVEELNDFSFPSISKMPNVAHNKLTEPSVKEEQNLLESETEEMPFGITKNQLLSIQQEPKIENKKCKDHSMVGFHTASGKKVTISKESLAKVKHFFVEENLKNDVTNIKNIETEFFQEREKANDGQACEMVELNNAQVWEEMPSYQNDDKKILVPFTTADLSKKLDSALSNESSNDILFERKLSENKKSKENCLLSDTKKSTGLPVEISGLGFYTGHGKRISVSETSLLEARKWLRDRDLQDVGGKTEASDMFVSSVDEAIYLKGDPDVQKEKLVPLNALYKTSSVEDDKNCISEEQDSVNLSNNVSDIKHDLKHDPKRSGFYQSDNADFFLEHISDKGMSYLKARPPTFTTASGKTVHISNEAVQKAREMFINDCDKVLKPNIETKLENNEMEVVKYFSETLGNKKDISLKFDAKKRNISTTDIFISNTKCSNLAQLESMSTSTGLEVNSELSHHKINSQTSDLSKSMGRMPKCSSSVGIFCTANGKPVQVSDNSLKKARQVFSEIESNSEQLLSMVPFKNSESHMETLTKEENTTLHAKTNLLSQKKDYLSDMVNSHNNSGFSTASGKQVLISENALKKVKNMLVEFDLMKNESLEQLPEFTQNVTPKVLSPIHCIDGSKNPENVVNSKNEETCNKEFNLSNNCDVETNYLENCTITKVSCNQFKQDEMQTPLETNLMPDQDFSFLKKKQGGPKNVNIEGDVTLNDFLVKESLQVCVSDSKAPENFLEREAMEIANAFMQDDELTDSELPHNARQNFITYKNKEKCMQLNSRFGKRRMEKGASYGEPPIKRKLLHEFDRVVENQEKSLKPSKSSPDGTMKDRRMFMHHIPLKPLICDPFSTTKERQEMRHPNFTAPDQGFTSKSPFFKRQTLGNSSYKSFLGSPLYKIFSTNDGKIQPNTVVNKPSKVFVPPFKTKSNSFTDEQYVSKRLKLKVKDHIQENEKQKYIDGHNTRDSENNENYLTDKDNYNQATTDVFEEFGDSTLVEMNKNLQNARELQDMRIKKKQTQQIYPQAGSLYLTKTSTIPRISLKVAVEGRVPSTYSSKQLYMYGVSKQCSRINSKNAESFQFHSQDYFSKEYLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPERVLLQLKYRYDIEIDKSRRSAIKKIMERDETAAKTLVLCVSEIISSGTNMSIAANNKNSKVDTKKESAVIEVTDGWYAIKALLDIPLLALLHRGKLTVGQKIITHGAELIGSQEACTPFEAPPSLMLKLSANSTRPACWYTKLGFFSDPRPFPLPLSSLFSEGGSVGCVDIVVQRVYPTQWMEKTLSGLYIFRNERAEEKEALKHAECQQKKLEALLTKIQAEFEKHEEENSATQHGLSRILTRQQVRALQDGADLYEAVKNAPDPAYIESQGCFSKEQLRALNNHRQMLNDKKQAQLQSEFRKAVAAAEMEEQGLSKRDVTMVWKLRVINYGKQEKDSVILSIWRPLSDIYSLLKEGNRYRIYHLAASPSKSKSDSTHIRLTATKKTQYQQLPVSHETLFQVYQPREALPLSKLVDPSFQPSFAEVDIVGFVIFITKKPGIAPLVYLSDEYYNVLAIKFWIDLNEDVIKLNTLIAASNLQWRTESRSGIPTLFAGEFSSFSASPKESHFQEAFSKLKSSVENIDLFCNDAESKLTHLHNIHNSKQPNTVKEYNLDSPSPQAKLGLEHVITTSHSEPSHLCPEGNSGLTTSSDKITPTSDCRGNRKMDDPKICKKRRSLDFFSRLPLPPPISPICTFVSPAAQKAFQPPRSCGNNYSSKPNKKNTLNSPPMTTLKTLSGTNMVENDLIADEELALINTQALLSNSSE</mol_seq> |
331 </sequence> | 522 </sequence> |
332 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sarcophilus_harrisii</property> | 523 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sarcophilus_harrisii</property> |
333 </clade> | 524 </clade> |
334 <clade branch_length="0.091526"> | 525 </clade> |
335 <name>ENSMODG00000009516</name> | 526 </clade> |
527 <clade branch_length="0.126843"> | |
528 <confidence type="bootstrap">90</confidence> | |
529 <taxonomy> | |
530 <scientific_name>Eutheria</scientific_name> | |
531 <id>9347</id> | |
532 <common_name>Placental mammals</common_name> | |
533 </taxonomy> | |
534 <clade branch_length="0.046896"> | |
535 <confidence type="bootstrap">56</confidence> | |
536 <taxonomy> | |
537 <scientific_name>Afrotheria</scientific_name> | |
538 <id>311790</id> | |
539 <common_name>African mammals</common_name> | |
540 </taxonomy> | |
541 <clade branch_length="0.201535"> | |
542 <name>ENSETEG00000003989</name> | |
336 <taxonomy> | 543 <taxonomy> |
337 <id>13616</id> | 544 <id>9371</id> |
338 <scientific_name>Monodelphis domestica</scientific_name> | 545 <scientific_name>Echinops telfairi</scientific_name> |
546 <common_name>Tenrec</common_name> | |
339 </taxonomy> | 547 </taxonomy> |
340 <sequence> | 548 <sequence> |
341 <accession source="Ensembl">ENSMODP00000033276</accession> | 549 <accession source="Ensembl">ENSETEP00000003277</accession> |
342 <name>BRCA2-201</name> | 550 <name>BRCA2-201</name> |
343 <location>4:304116271-304197558</location> | 551 <location>GeneScaffold_4230:2259-131183</location> |
344 <mol_seq is_aligned="0">MSAGYQGKTTFFEVFKTRCSESDLGPISLNWFEELTSEAPPYNYEISEDPGSKTEITEVNYFKTPQRKPFTYNQLASTPLIFKEQNVNCSLNSSPLSGPDHCKLDLGKDTAMDKELRKSHCVLKTKLGQANDVTSPPLSTCLSESPAVLRGAYRTPQREKPVAYGNLLYTPKLMKVNTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDGQTPGARTPDDTTIMLQKYLSQHGERPKRLDRSTSSVPNIENIHAEGYGTSQELEKMIDDSFDDGNNFKDHGGKMINMPNIMEEEICDPIINTPVEDDASFNFTGYIVGNLRKVKCDKTRKKYSKTKTNEYEDTKNLSKKENYSSASETELEYCYPLISKAENNEIQKSIKNVNEEMLEDDVPSSATQWSQLNLSGLDVTQIEKTPLPHISFCVQNSEERPANESNECSSLSTLKTVEIAAYKEDEEKITTPNKGSVMLLKQISPEISPPNAISQDRKNSKFKMRQTSEETVSMDFLECSSLCTVNASITTEAKVFENKLENPKSSLDDIICPEKHGLLSPNTDGKGSCATVSKRNSAPLNSTGIISHFKKRTKKFIYVVNNDSSYQGEKIQKTQEFGSVNCSASSHLELNSFEEHHEFTNAISDFLDSSIRRKCSQFDPKEETAPLTECDKTMMEEYFHESRFPHNEVTSQDLGFREVEMNKGELESDITETDNQSQSQERSYNDFSKRQRDSHVKECILTATCLSPRKHTEIELGNIAENSHFTTKNSTLHDSVDTSINSLTQLPQDPQELSVVIYGKKEPLCKVKQKLRFRRNSDSTFITNKVRSELKESFGNKGNQETEVLNEILGDDRELSSEKCKEMTSVSLGAQVNKNAGLFVSLRDQENTNLITEKTAIELYSEEDLHFNEENFIFQTIDKKNIRVTDSSEEFFATSFCYLEESIPKNSTEIDYKQTVQELFMEDSFSSEMVPVFTRDSQDKNQNSKLACECISQSKSSYSKSTIDTNMKPKRNEENYLGKWAQNFDPDSNKSFGCGFKTASNKEIILSEHNIKKGKLFFKDIEQYYNSSSVEVVNSSISVAAENIKTDSDSKKQEKNSFPAWKSEPSHIISKDVQSNIFVLNEKEIDPALEDLCSEKDLDLNHSLTASQKAEITELSTILEETGSQFEFTQFRKQSSTVQTLDISTNKADELGNLNTFELQMGVELGDHFGAEYETDNNRSPVQVDLNVNSEVVINVKQRTVYLPKSNSEQGASTDIFTESEFKGFCSALGRKMNVSNEALQKAMKLFSDIEEIGEGTPLQNLRNGPLDRSQKSNIVPAFKIANYANNSKDFKGKDAKPQSNAENNTGIFVEENMLNCSRDPENKQSSSPLFISSHKDSSKLKGSVEPDSDNSQREKNDLSSIDQQNYPKMSIQLIRQENYPVKGGLLDLNCLGKAVKDEKIFASNVSGIEELVSNQEEQKMRENENSSHLQSFQTASGRNIMVSKDSFSKVAHLFAEECSVKELNDFSFPFTLKMLNTALNKSVESSGKKSENLAENEIEEMAVATKKELMPIQKGPKIENKKWKEYNMVGFHTASGKEVTISKESLTKVKHFFVEESLENDVTNIKNLETEFLNEREKINEKLVQAYEMVKLNNSQVCEEMQSFQDNDEKVLPVRTTDLPKITDSILSNEPSNNVLFEEKLSEIKENCILSDAKQSTGLPVEMSGLGFYTGHGKSVPVSETSLLEARKWLKEIDLGGKTKASGMFVSSVDVKEDSDIHVKKSVPLYTSNNTSSIDDKNISDKQDAVFLSNSMSSIKHNLKHDTEGSDFCHSDDADFFSEHISDKVMSCLKAQPPAFTTASGKTVHISNEAVQKAREMFINNGDKFLKPNIENKSENNQMKNVKDPSKILENKDISPKSFDGKKRNLSVNEGSFSNKIYSKKAQLENISAGIALEMDSEVSHCQINSKTSDLYKSTIGKQPKGSSSVGIFCTANGKPVQVSDNSLKKARQVFSEIANDSEQLLSIKGSENHPETLIGEENAMLYAKINLPAQKDYLSNMQNLYNNSGFNTASGKQVLISESALQKVKGMLVEFDLMRNECLESIQDVTPKGLSPVLCIEGSETPKHIVNSKSKEICNKELHFSNNCNVEISSSENSRIIEVSCAQFKQDMIHPLLETKLTPAKEILFLKKGQVGLKDVDMESSEAIDGLPVKRNLQVSSPNSKAQETSMEREAVEIAKAFMQDDEFTDSELPHNAKQSFFTYKNNEERILTNSRFGKRRMEERASYGEPPIKRKLLYEFDRAVENQAKSLKPSKSSPDGTMKDRRKLMHHISLKPVTCDPFSTAKEWRQMRYPNFTAPGQELTSKYHFLKHQTLENSSHNLLLQSPSYKDSSTDNGKVKSISVRGKPAKVFVPPFKTNSNSSTATDDEFIRKRLKVKVKEYTPENEKQKYGDAHNSGDSENNENYLSDKDNSNQATTDIFKECGNLHLEMIENLQHAREMQDMRIKKKQTQKIHPQAGSLYLRKTSTLPRSSLRVVVEGKVPSTYSSKQLYMYGITKQCLRINSKNSESFKFHSEDYFSKEHLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPEWVLLQLKYRYDIEIDESRRSAIKKIMERDETPAKTLVLCVSEIISSGTNISITANSKNNSVETKKESAVIEVTDGWYAIKALLDSSLLAILQKGKLTTGQKIITHGAELIGSQEACTPLEAPESLMLKLSANSTRPARWYAKLGFFSDPRPFPLPLSSLFSEGGNVGCVDIVVQRVYPTQWMEKTLSGSYIFRNERAEEKEALKYAECQQKKLEALLTKIQAEFEKHEENSATQHRQSHILTRQQVRALQDGADLYEAVKNAPDPAYVEGCFSKEQLRTLNHHRQILNDKKQEQLQAEFRKAIAAAELEEHGLAKRDVTTVWKLRVVNYKKHEKDSVILSIWRPLSDIYALLKEGNRYRIYNLATSPSKSKSDRAHIRLTATKKTQYQQLPVSHEALSQVYQPREAVPLDKLMEPSFRPLCAEVDVVGVVISVTKKPGVAPLVYLSDEYYNLLAVKFWIDLNEDVIKLHTLIAASNLQWKTESRAGIPMLFAGEFSVFSASPKQSHFQERFNKLKNSVENIDLFCDGAEKKLSHLLDTHNSKQPNAVREYNLDSPQAKLGLGPMISPFHRERNHHCPEGNSGATISSVKISPTSDCRGDRKMDDPKICKKRRSLDFLSRLPLPPPISPIRTFVSPAAQKAFQPPRSCGNKYNVPVKKNTSNSPQMTIKTLSGTTMAENDLIADEELALINTQALLPNSSE</mol_seq> | 552 <mol_seq is_aligned="0">LVGTKERPTFFEIFKARCSKADLGPISLNWFEELSLEAPPYRSEPAEESEYKVSSYEPNHFKTPQRKPYDPLASTPVIFKDQGIMPWLYQSPLKLYEFTIKETANSKQRSRLSKRARMDPAKDATSPPPNPCLSGSPLLRAAHVTPQRAKSAVCGNLFHTPKLLKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIAREQEVSELVFPNDATVASNDCFSNHNESLKKNDWLIPSGSDAENKNQREVISYEFGETLGNLFGDVHSHQDHSGRAVSNVIDEEVQERVADISEEDSFSLCVHKYKTGKLQKLKTRKTREKVLNKTKAGDREEAEPQLQGRKHLLSFGMEPSDSDPCDLAGLAQEPTGGTSEARSQELRASPALEWSQLMLSGLNGTQMTKMLFLPDPSFDQNDLGKDLIGTQKGCVTLVTTENSPPHLSSLRNTEAVLSEDPVLKESNEEKCVESNQDFILPAKPAVSGTSPITSPLQSTKKLVCKIRESPKETSGVDSSGYMTDPSFKEKPEASAGGLEADCHCSQREGLFCASSAANRSCPTSFRPASATLKGAGLISTLKQKTRKFVYSVSDETSYPEEQIQRDEDPEPPHCPAQVGVHAAPGAHSDSLHSPVKRSNLQSRPEEPTLSSCVGPILRKSSNHESSLNKIISQDLSDKEIELNTEELESFITTESDSLSCLQESYCEEDPKNDRRISDVREMVLAASHRPAIECGSVHLHSQESFLHDHNTSTLILTPSPKEPVSNPAMISRKADNIFEATFILTKNILVGKNQEISILNDNSQIAQLSPPEKYLKVTSPSLKVQFDQNTNGMAIPKDQEEITFTSEVTVCSNSEELFPENKDNFVFQTTSEKKNMAVLEDAKEHHETSVSCVKEPAPKHPTVVAYSDMDAKQAVQVLAPQDSNSSNISLNLSEEARKSKKQYLKMTLSQDLKTNLSLELARKSSRNDDVDSCVGLSCPISNCDFGGGFRTASNKEIKLSEHHIKKSKALFKDIEEQYPKSLACVEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKVACLLKNDCNKSTSGYLNHKVEFTGFCSALGTRINVSSEALQSVRSLFSAIEDTSEDTSVEGDPQSFSPGKHTSVPLSKRTYLNNDENVNMKCHIILQNNMEITTGIFIEGNTRDWKKNIENEEKCTDARRNTYSSGKSDSDSSKANTPGIHKDENGSPSNVGQHNMYLKLSGQLIKEGNNEKEDLSDLTCLEVVKTGEIVCVDTQTKHQSTNTKMRQNVKDFDMCNVPFQTASGKNIRVSKESLKKVANLFKTEESNTFSDLFDSELPSGINTDKSDSENRKMVKNNIQKGSNPIGIENKLLVLHQQPKCGIEKTREPAMLGFHTASGKKVKIAKESLDKVKCLFDAEKQDDDTSKIFSFHSQGTKTLKETREYTEGLQLETVEVTTLPKSEEKNLLHDHERNFISNETTGLLNEPFNRHTKSLKTSNSISLKVEVHQNLEKETAKSPTMCAASENPAFICTGRGRKISVSQASLFEAKKWLREGESEDQPVDISTADWVGNPPYGSSSNPVITESDKKIYLSNNSYSSDFCHSNEVRNKSGSLSKIDCSGIEPVMKNIRNRECTTSISEVTATAKKARTPPQTVNENVCVQKLRTDAPCTSENAAIGFAMSGSSNFEVGPPAFSTASGKRVSISRKAIERAREILVDNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSAAAGFSTASAMQVLISESALYKVKGMLEEFDLITAEYNPQSPPFISAASNILPLPSVENIPKNTNSKEVRKTCKTEFQLLNIERGSSESPLETKASLVEKSRPLGKEQTLLRQVKMKIDNAPTFSNIPMKKPVEVTSACSKDPEGYFETEAVEIAKAFMEDDELTDLELPSHAKHSQFTCTEPKETVVLNSRTGKRRNTLVSAGEPPTKRSLLNEFDRIAEKQEKSRQASKSTPDXXXXXXXXXXXXXXXXXXXXXXXXTTKEQPEIRTPSFTAPGQQFLPRSHVLGHSALEKPSSSVSVSGEPLHRAPVSGRDGARAAVSAGRPVKVFVPPFKTKAHFQKKEQCAAGNVDVDENEHPQKNLAVPGAGASMSGGGIHPLDQKDSSQAAAVTFSTHEGEPLDVLASLQIARDAQEARIRMKQQQRVCPQPGSLYLAKTSSVPRVSLRAAVEGRAPAACSPEQLYVCGVPTHCAQISSRNAAAFRFRAQDYFGKEAWAGKGIQLADGGWLIPSNSGHAGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHADARGRAVLELTDGWYALRAQLDPPLSALLKTGRLAVGHKIITHGAELVGAQDACPPLEAPASLLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRCVPSRALTRQQVHSLQDGAELYEAVRTTPDPGHLEGHLSDEQRRALSAHRQLLSNKRQAQVQLEFQRAVESVEAEVQDLSRDVTTMWKLRVTNYQKKEKDSVVLSVWRPSSELFSMLTEGTRCRIFHLTVAAAKRKAGKGTVQLTATKKTQYQPLPASEEILSQVYQPREPLDFHRLLDPNFQPPCSEVDLMGFVVSVVKTTGLAPMVYVSDEHHNLLAIKFWVDLNEDTIKPPILIAASNLQWRPESKLRIPTLFAGEFSTFSANPKESHFQEASHRMQAAVEDASAWCGEAKQKLLLLLEARGPEWSTPSKGXXXXXXXXXXXXXXXXXXXLPCAHGDCPNFLSLCSKETSLPMPVSAQKTATSCGGVEDGGSDPKTARKRRALDFLSRLPAPPPVSPVCTSVSRAAQKAFRPPRRCGTAHGARLGTRASASHQKTTPLGKAKDTLLVESDSIADEELALINTQALLCGPAGNPLVCVSQSARTTPLWPEASPGLQQPGPMPELPGNASQRGTRQEPHLQETSGTKFME</mol_seq> |
345 </sequence> | 553 </sequence> |
346 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">monodelphis_domestica</property> | 554 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">echinops_telfairi</property> |
555 </clade> | |
556 <clade branch_length="0.017008"> | |
557 <confidence type="bootstrap">56</confidence> | |
558 <taxonomy> | |
559 <scientific_name>Afrotheria</scientific_name> | |
560 <id>311790</id> | |
561 <common_name>African mammals</common_name> | |
562 </taxonomy> | |
563 <clade branch_length="0.208425"> | |
564 <name>ENSPCAG00000000379</name> | |
565 <taxonomy> | |
566 <id>9813</id> | |
567 <scientific_name>Procavia capensis</scientific_name> | |
568 <common_name>Hyrax</common_name> | |
569 </taxonomy> | |
570 <sequence> | |
571 <accession source="Ensembl">ENSPCAP00000000440</accession> | |
572 <name>BRCA2-201</name> | |
573 <location>GeneScaffold_3650:343-54585</location> | |
574 <mol_seq is_aligned="0">MPVGFKERPTFFEIFKARCSKADLGPISLNWFEELSSKAPLYQSEPAEESEYKVGSYEPNFFKTPQRKPCYNQLASTPVIFKEQGVTLPLYWSPLNLCRYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLQDTHVTPQREKSVVCGNLFHTPKLAKGRQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASETVFPYDSTPISKNYFSKHKKSQKENDWRVSSVPENENKNQGAVLSPESGEVPRGLFGDVNRCEGCGGSSVPCGPGEDTQETVADISKADSVSLCITKYKTGNTQKMKTGKTRETIPKIAKAGECEDVEKELEENRHSCAREMEASDSSLLDFHEPDEETAGSRSHTVSGGVVASSASPWSPLTPSGLSGTQMEKRPSLSMSCSHSHLEKDLIGPENDLMTSESSLPHISGVPETEKRWPEERVASKSHKGQKLAPQKTSVPAVQQVAAAASQSATEAVVGVRPLAGETCAVRSDDVTPSHFQEKPEASNSGWEIEAACSQKDGSLCPSSVGDGSCSATPKHASVALKNVSLIATLRKKTKKFIYSISDKKSSPEGNTWRNPDSGPTQHSQFEANCVFADADSGLLRFSVQKNHLQNEGEEPARPLTSSLGTILRESSSNKSSSTDKELSQGLYCKEARVNSEEVQSSGSTETHGQSCLQGHHGDKFPTTQGASDVKEEAWAVSVHPVTQHSEAEDSSVCLDSPRSSPCGRGGTASACPSPPDPRGTMSGRLMIAREREPCEMSEELSHKGCVTTFELIKNIPPEKNQEMCALNENCREGEWSLTQDYVTTASPSVKVWLGQNTDSTVVHANQEDTAFISKVTVSPNLEEFFQENEENSAPQVMNERNMAALEGMEELPEEHFRCVREPILKTTTRVMCSDRGYKQAAHVLMTEVCDSSAAICGLTEENRHGEEQRLTGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEHGIQKSKVLFRDIEDQYPRSLACAEIVGVSLLDSQQMLSRLDTLASKTPNPTSGEVWSKAFVSDSGSSHTAPQTLSLKQDFNSSRKLTPSEKAEITELSTILEESGSQFEFTQFRKRSMQNTLERSENQLTVLHDLSEDWKDVNLDLTTPGPSASQTGDSQRWVSTAATRQTAPNHVKQRASGCPEHKEKFVGFCSAGGTQVHGSSTTLQGALRLFSDTESLSEDASTGVASGRFSLSPSASVVSVSEIESSNERSLNKKHDKCQLTLPNSPDTTAGMSVKGNPERGKRSREDQCAGPHGNTRKLSETDGSDSAEKAPVCVCEGGTGLLWDEPSVGLRASSQSTMAGNGDITEGLSDLTCLEVVKPEETFHVDTSEKEEPTCNKMEQSGKDLDLCDLPVHTASRKAISISKESFSKVVNLFGTKYTEENSINLSDSVNSKLLSGISKNKKDCLRYKERNTVQNKVWKEKNLTDTENKLTVHPQAKHEMGKTGEPPMLGFHTASGKKVTVTKASLDKVRNLFDENKQGSTSEISNFYHRGTKRLQERGEHEEGLAVACEAVGTTPVPESGEVEDSLGDSDRNCVSNETLGFSRDCLCSHTENLRASNDSCVNDEVHENTERETAECPVTCDQPSDRHQALEFYTGHGGRIGGCQTSLLEAGKWLREGELGDERGKRNAADCVGNPSRGGSSGSITTENGNKNLSEKQDLSYLSNSCSYRSGFCHLDELHHKSWHLSKIKKDNSGIEPLVKDAQDRKSSSICEVTSPVGNADTHPPTIKEDTCVQKCVADTSLCRNNTATELTMSDSNSFAVGPPAFSVASGRVVSVSPETMNQVSRLFADTSSKVVTHTDCKSDTYQAKAVGGCHTALGDSEGNIFHNTLDGEGCVSPSCKALGDIHSEQVLPHTQRMSELDQVSKRPSCQVSLKTSDVCKSYTEKLPKSISTNTCGIFSTAGGKSVQVSDAALRKTRQVFSEMEDSAQQLVYTESCHSNKGHSNKVTKESKAVIHTKDKLPSPLAGFSSRAVNSSASSGFSTASGKRVLISENALQKVKGMLEEFDVIMADCSYDSPTSEDVSKILHCNDERVPKHCVSSKVQTCYRGFELSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSIKRSLLSEFDRAVENQEKPLQAAKSTPDXXXXXXXXXXXXXXXXXXXXXXXXTTEKRQEIQNPNLTAPGREFLPKSHCFERLALEKPSSSFSISRQPQCQVPAPSTGKASHLVTTGKPTKVFVPPLKTKSRFQRSERCATRNVNSEENKHTPRSVVKLGSGDSDNTVSEGRCHPLSKSSSSQAAAVTVTGAGDEPSDLIAGLQSARGLQETRIKGKQQQHVCPQPGSLYLAKTSGLPRLSLRTAVGGRAPAASSREQLYVHGVPEHCVKVNSRNAESFQFRAQDYFGKEASWAGKGVQLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWIIWKLAAMEFCFPEKFAYRCLSPERVLLQLKYRYDIEIDRSSRSALKKIMERDDAAAKTLVLCVSAIVSSSTKAHEMPSGNCSRVDSQPTAILELTDGWYAVRAQLDGPLSALVKAGRLTVGQKIITHGAELVGSQDACTPLEAPDCLMLKLSANSTRTARWHAKLGFFRDPRPFSLPLSSLFGDGGGVGCVDVVVQRAYPLQWAEKTPSGLYVFRDERGEEKAAARHEESQREKLEALLARVQAEFEEQEENAAKQCTPSRALTRQQVCALRDGAELYKAVKDAPDPGCLEDYFSDEQLRALRDHRQLLHEKKQAQVQLEFQKAVESAERGEQGLSRAVSAVWRLRLVSYKSRERGSVLLSVWRPSADVSSLLAEGRRYRICHLAASESKRTSGSTRVQLTATRRTWYQQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAPLVYLVDETHRLLVVKFWTDLNEGIIKPLALIAASNLQWRPEPNPGTEPGIPVLFAGDVAVFSGSPKEGHFQEAFNRMRSAIENTDVFCSDAENKLMHVLNTHGPSWSPPNEDWTSESCCAQAVLGAHSRFPLSLTSHEIKYWNYSLCPKGKPLSTPVSAQKTWRSCRGEEGGDDRRAIRKRRALDLLGRLPAPPPVSPACTFVSPAAQRAFQPPRSRAARHEPPGKEQEMTLLKKEASLVESESIADEELALINTALQGCAGQCPGVPVGDPAGMAPPPSPGPLGPQRAAGPAAGGQEQPQSSTG</mol_seq> | |
575 </sequence> | |
576 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">procavia_capensis</property> | |
577 </clade> | |
578 <clade branch_length="0.070452"> | |
579 <name>ENSLAFG00000002670</name> | |
580 <taxonomy> | |
581 <id>9785</id> | |
582 <scientific_name>Loxodonta africana</scientific_name> | |
583 <common_name>Elephant</common_name> | |
584 </taxonomy> | |
585 <sequence> | |
586 <accession source="Ensembl">ENSLAFP00000002234</accession> | |
587 <name>BRCA2-202</name> | |
588 <location>scaffold_11:4649923-4713848</location> | |
589 <mol_seq is_aligned="0">MPVGFKERPTFFEIFKAQCSKADLGPVSLNWFEELSSEAPPYKSERAEEAEYKISSYGSNPFKTPQRKPYYNQLASTPIIFKDQGITPALYQSPLNISGKDIASSKQSRFSVRAEMSQAKDVTSPPLNPCLSESPVLRCMHVTPQREKSVLCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEAPETVFPDDSAISKNHFSNHNKSLKKNDQFIPSVPDSENENQGEVISRELGNFLGEVNSCEDHPEGGAPSALEEEGHETVAHISEEDSFSLCVSKYKTGNLQKVKTDKTRKKYFNKTKAGECEEAKKLEESRHLFAFEMEPNDSDPLGSSAPGEEPTGNIGHTVSKELVASSASEWPQLTLSGLNGTQMERIPLLPTSCDQNNSEKDLIGTEEECANFTTSENSLSRISRLPKTEKLLNEERVVNKSEEEQSPLSHKDSILAVKQTASGTSPVASLSQGITKSIFKIRESPDVAFGVVFSDNMTDSNLKEKPEAPESGLEIGANCSQRWGSLCPSLVGNGSCPVTTKHASVTLKNAGLISTLKKKTKKFIYSVNDKTSYPGEKMQKDQESEPTHCSAQFEAPLTFLNSGSGLLHSSVKKNSSQNDTEGPTLSLTSSFKTILRKSSNNESSCNNKVISQDLDYKATEVNTEEPLSPVTTGPDCPSCLQESHGDGDPTGQRASDVKRKVLAAAHRPAVRHSEVELSGVHFQLQKSFLYDHHNASSLGLTPRSKDPLSNSVVISRDKESYKMSEELKHKNREATFELTKNIPLEKNQEMFVLNENSKKAELSPPEKYMKVASHFVKVQFNQNIDVTVISKEQEETALISKITIDPNSKELFPENEDNCVFQMTNKRNTAILEDIKGLPKASFGCVKEPVLKSPTMVVYSDIGDERAAQLLLTEGDDSSDVVRDLTEENRNREKQHLKMTLSQHVKSDVSLEVDRKSSRNNSYVGRRAGLLDPVSNYSFGGGFRTASDKEIKLSEHNIKKSKALFKDIEDQYPESLACVEIVNPLSLDDQKKLNRPHALDWQTLKTASGDEWNSVFVSDNRSGRTAPQILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSRILENNTCERSENQITVLNNSSEGWKDVARGVTTNAPPTSQVDNSKKWDGAVGDKQKVAGLLKSNSDESASGCLTHKNKEKFTGFCSALGTKISVSGEALQSALKLFRDIEDVREDASAEVDRGGSSRSQCASVVSVSELKNFNSDENLSEKHSKCHVILQNNIDITTGMFVEWNTDSCKRNTDEEDKCTGTSRNACNLGESNGNESSRNDTVCIYEDENALPCMTDQHDVYLEVPRQFIKEGNNEIKEGVSDLTCLEVVKAEETFHVDSSDKQSASNKMGQNVKNFDICDLPIQAANRKNIRVSKESLNKVVSLFDKKYAEEELSNFSDSLSSELLSDLNNKMDSSSNEERNTVKNKIWEGSNPVGTENKLLTVHRQPKCEIEKTREPTMLGFHTASGKKVKIAKQSLDKVKNLFDENEQDNSSEVFSFPHQGAKTVKEIEECKEGLELACETVETTTFSKSEDMVNSLGDNKRGVFSDETMELVNDHLCSHTENLKTSSSVSSEVEVHENVEKETAKSPTTCFRNRSTCSASENTALAFYTGRGRQISVSQTSLSEAKKWVREGELEDQPGKINAAKVACLKEHPQGCVGNPSYGNSSDSIITENDKNHLSEKQDLSYLSNNCLHNSDLCHSDEVHNESGYLSKNKMDNGGIERVVKNVKDRKSTSVSEVTSTVRKANTNPQTGNEDICAQKLVTGTSPCKNENVATEFVISDLNNFEVGPPVFSTASGETIKRVSEIFADSSSKVVQQNTESKSDADKTKPVADCSAELDGPEGDAFPNPLGGEECSMHSREALDDIHSAQILPHNQSMSELDKVCEIRPCQVNLKTSDVCKLNTGMLPKSLSSTNACGIFSTASGKSVQVSDASLQKTRQVFSEIEESTKYLFSKLSFKSNEDSNKFTKEKNTVIHTKNKLLPPQEGFSSSVNALHKAKEMLEEFDRITTECSHHLPTSRQDVSKTPPPIGKRIPKHPVNAKMEKTYYKEFRFSNNSNVENGSSETDHPIKASPHLCQSKQEVSLVENVHLLAKEQTLPRNIKMEISKIKTFSNLPVKTNMEVCSTYSKDPENRFETEAVEIARAFMEDGELTDSEPPSHAKHPQLTCPKSEEPAVRIGKRRNALVSAAREPPIKRSLLNEFDRIVENQEKSLQASKSTPDGTIKDRRLFMHRISLTPISCAPICSNKKKRGRMSASLGKEVRSLVEVGGPDAAPTLHRLSSITHVTSFPPRDLKSEHSVTTGTPTKVFVPPFKTKSRAQRNEQCAAGNVNLEENKQTQKSAVKLGSGDSENNINEGGIHPFSKNLITNLQNARDRQDTRIKMKQRQRVCPQPGSLYLAKTSTVPRLSLKMAVGGRAPSTCSPKQLYMYGVPEHCIKINSKTAESFRFHAQDYFGKEALWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWILWKLAAMEFSFPKEFANRCLTPERVLLQLKYRYDVEVDRSRRSAIKKITERDDTAAKTLVLCVSAIISSNTNVHETSSSTTSSVGSRSVAILELTDGWYAIRAQLDAPLSVLLKKGRLAVGQKIITHGAELVGSPDACTPLEAPESLLLKISANSTRPACWYAKLGFFPDPRPFSLPLSSLFSDGGHVGCVDVIIQRAYPIQWVEKTPSGLYIFRDERAEEKEAAKYAETQQKKLEALLAKIQAEFEEQEETAAKQCIPSRALTRQQIRALQDGAELYEAVKNAPDPGHLEGYFSEEQLRALSNHRRVLNDKKQAQIQSEFRRAVGSAEPGGPGLSRDVAAVWKLRVVTYEKKGKDSVILSVWCPSSDLCSLLTEGRRYRIYHLATSKSKSKSERANIQLTATKKTQYQQLPASDEILLQVYQPREPLHFSKLLDPDFHPPCSEVDLIGFVVSVVKKPGFAPLVYLSDECHNLLAVKFWTDINEDIVKPPTLIAASNLQWRPESASGIPTLFAGDVSTFSASPKEGHFQEAFSRAKNAIENTDVFCNDAEDKLQHILTAHDPKWCTPNKDCTSEPHSAPAGLGADSKFLLSFPNHEINYQSSLSLHSKGKSLSIPVSAQKTSKSCCKGEKDSDDQKTVRKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKHETPIKKAGWTSPQMAPLRRASETSVLESDSIPDEELALINTQALLSGSAG</mol_seq> | |
590 </sequence> | |
591 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">loxodonta_africana</property> | |
592 </clade> | |
347 </clade> | 593 </clade> |
348 </clade> | 594 </clade> |
349 </clade> | 595 <clade branch_length="0.005754"> |
350 <clade branch_length="0.125005"> | 596 <confidence type="bootstrap">12</confidence> |
351 <confidence type="bootstrap">87</confidence> | |
352 <taxonomy> | |
353 <id>9347</id> | |
354 <scientific_name>Eutheria</scientific_name> | |
355 </taxonomy> | |
356 <clade branch_length="0.005552"> | |
357 <confidence type="bootstrap">6</confidence> | |
358 <taxonomy> | 597 <taxonomy> |
598 <scientific_name>Eutheria</scientific_name> | |
359 <id>9347</id> | 599 <id>9347</id> |
360 <scientific_name>Eutheria</scientific_name> | 600 <common_name>Placental mammals</common_name> |
361 </taxonomy> | 601 </taxonomy> |
362 <clade branch_length="0.028397"> | 602 <clade branch_length="0.011343"> |
363 <confidence type="bootstrap">100</confidence> | 603 <confidence type="bootstrap">5</confidence> |
364 <taxonomy> | 604 <taxonomy> |
365 <id>9348</id> | 605 <scientific_name>Boreoeutheria</scientific_name> |
366 <scientific_name>Xenarthra</scientific_name> | 606 <id>1437010</id> |
607 <common_name>Placental mammals</common_name> | |
367 </taxonomy> | 608 </taxonomy> |
368 <clade branch_length="0.060711"> | 609 <clade branch_length="0.009204"> |
369 <name>ENSDNOG00000038771</name> | 610 <confidence type="bootstrap">4</confidence> |
370 <taxonomy> | 611 <taxonomy> |
371 <id>9361</id> | 612 <scientific_name>Euarchontoglires</scientific_name> |
372 <scientific_name>Dasypus novemcinctus</scientific_name> | 613 <id>314146</id> |
614 <common_name>Primates and Rodents</common_name> | |
373 </taxonomy> | 615 </taxonomy> |
374 <sequence> | 616 <clade branch_length="0.001562"> |
375 <accession source="Ensembl">ENSDNOP00000034947</accession> | 617 <confidence type="bootstrap">51</confidence> |
376 <name>BRCA2-201</name> | |
377 <location>JH578084.1:11711-90821</location> | |
378 <mol_seq is_aligned="0">CPWDPKRGQLFFEIFEMRCSKTDLGPISLNWFEELSSEAPPYISEPAEESGCKISSYEPNLFKTPQRKPFYNHLASTPVIFKEQDLTLPLHQSPLKESEKYIQDIGKDIANRKQRSHRTRRTNVFQANDVTSPPLNSCLNESPGLRFTLETPQREKSVVCGSLFHTPKFMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASETVSPKNTTAILKSYLSNQDEILHKNKPIPSVPGNKNKNQGEALSPELGKIFENSFEEESICEDHFENSVPHALEDEVREPVVDISEEDSFSLCVTKYKIENIQKIKTGKARDQKFSRTITDTLEEAKKEMSENRHSFAPEVEPNDNPLESNMTNQKPVGKSSDKISEEVLPSSGSDWSQLSSNLNRTLMERIPLIRISTCDHNNLGKDLIGTEKECAIFVTSEDSLPHILSLPKTEKISTEEIMVNKRGEEQCLESHKESSLSVEQTISGFSLIASPLQGIKKSIFRIRESPEEPFSSTVFSGNMNDSNSKKELEASANRLEIYAVCSQKESSLCPNSVDNESSPASVKQTYVTLKHTGLISTLKKKTKKFVYAINDKTSYQGEEIQKDQESELINSSAQLDGNAFEVPLTFTKADADLLHSSVKRNCLQNDHEKPTWSLTSSSRRILRNCSNSANIFSHNKIVAQDLDFKEGKISKEELQSFITTKTDHQSILQEGHCEDPKSQRVSDVKENVLAIACHPEIQHSEECSNINVNSQKSFLYDHGNACTLILTSSSKDPPSNPVVISREKESYKMSEKLNDKNCEASFELTKNIPTEEKQEIHVLNENSKEPESLLPEKFVKVASPSMKIQFNQKTNLTVIQKDGEETDLISKITINVNSGELFPENENDSASQITNERDITVLGNTKELHEANLRCVKEPILKNSATVVYADRGNGQAAQALITKDFDSLNVVPHFTEDSNNVKQHLNITLDQDFKTYISLERDMKTNRNKDDLNTWAGLLTPISNDNFGCGFRTASNKEIKLSEHNIKKSKMLFKDIEEQSPDSLAWIEIVNTLPLDNQKKQNKPRTLDSQTVNTVSGDVQSFVSKSENINTSPQNLSLKRGLNSNYNLTPSQKAEITELSTILEESGSQFEFTQFRKPNNILKNNTFELAENQMTVVSNTSEKWKDADPDLTINHPSISQVDSSKELESTVGNKQKTACSLKNNCNRSASSHLTDKNEVEFGGFYSALGTKISVSSDSLQTAVKLFHDIETISKETSGEEDLGSFSSRKCHDSVVSMFKKENSNSDKHLNERNDKCQLTFQHDIEMTPGIFVEENTGSYKRNSENEESKYADTNRSTYNLRDSDGGNSSENDTVYIHKDENGLPCISQHNLYVKISSEYIKEGNTEIKEGLSDLTCLEVVKAEETFTVNTSNEEQLTSNKMGQNGKDSDIFNLPLQTESGKNISVSKESLNNVVNFFDKNCTEELKTSSDSLNSELLSGINNKKDISSHEESNLAKKIHKGSIPVGTENQLPALQIQPECELEKIKEPTMLGFHTASGKKVNITKESLDKVRNLFDEQMQDNITEIANCGHLGTKTLMEREECKEGLELACETFEVNTLPEYEEMQNSLDDNKQNLVFTETTVLPRHLSDNLCGQTEILEASNSISLKVKAHENTEKETKSPATCYADQSICSAIENSNLAFYTGHGRKISVNQTSLFEAKKWLRKGELEDQPVRIIRLNEYHEDCVGNPSFGNSSNSIITEDDKNHFFEKADSILSSNSNMSNTCSYHFCHSDEVYNKSEYLSKNKIDNVDPVVENVKDRRSMSFSEEPSVKEVNTHPQTVNENSCIKKLFSNSSSCKNKNAAFELDLSDSHNFDVGPPAFSTASGKIVCVSHETIKNVREIFTDNHSKIIKQNTESKSDTCQTKIVAGCYETLEDSKDVIFPGSLDCKEHSIRSHENFADIKSEGILQHNQSTPGLEKIAKIPCRTNLKTSDTCQFNIGKLPKSFSSANACGIFSTASGKSVQVSDTSLQKARQIFSETEISAKQFFSKVSFRSNEHSDQFTKEENNMTLSNSLPSSQKGFSCNVVTSSAYSEFSTASGKQVLISKSALHKVKGMLEEFDLIRTEYNIQHSPTSRQEVSEILPLTCVNKRTPKHSENSKLKIAYNKGFKLLHNYNIENGSSENNFPVKASPSLCLYKQDKEQSVLGTKVSLVDTIHPLGKEETLPINGKVDIGKPETFSNLPVEANIEVCSTYSKDAENYFETEAIEIARAFMEDGELTDSERPRHAKHSLFTCQGNEGKVLLNPRSGKKRGNTLVSVGEPPIKRNLLNEFDKIIENQEKTLKASKTTPDGTVKDRRLFMHHISLKPITCGPSCTTKEWQEIQNPTFTSPDQELLSKSHPFIPLTLEKSSSKLSVSGQPFYKVPATGNAKISDSITTSKPTKVFVPPFKTKSHFERDERCASRNINLEETKQTQKNIDELGSGDGENSISDSEIHLFNKNNSNKAATILFTKCGKEPLDFITNLQNARNTQDMRIKKKQRQRICPQPGSLYLAKTSTMPKISLKAAVGGHIPSVYSHKQLYMYGVSKHCIKINSKNAESFQFHAQDYFGKEGLWAGQGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRSWVYNHYRWIIWKLAAMEFAFPMEFASRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCISEIISLSTNISETSSSKAASVDPKTVANIELTDGWYALKAQLDLPLLALLKNGRLAVGQKIIMHGAELVGSPEACSPLEAPESLMLKISANSTRPACWYAKLGFFPDPRPFPLRLSSLFSDGGNVACVDVVIQRAYPTQWMEKTSCGLYIFRNERAEEKEAAKYAEAQQKKLEALFTKIQVEFEEQEENATKQCAPSHVLTRQQVRALQDGAELYEAVKNAPDPGYLEGYFSEEQLRALNNHRQILNDKKQAQMHLEFRKAIESAEQRVQGLSRDVTTVWKLRIISYETEEKNSVILSIWRPSSDLYSLLREGKRYRIYHLATSKSKSKSERVNIQLTATKKTQYQQLPTSDEILFQVYQPREPLHFTKLLDPDFQPACSEVDLIGFVVSVVKKIGLAPLVYLSDECYNLLAIKFWVDLNEDIIKPYMLIAASNLQWRPQSKSEIPTLFAGDFSIFSANPKEGHFQETFNKMKNTIENIDIFCHDAEKKLMLILNANDPKWSTPTKDYTSGPHTAQAVLGTGNVFLMSSPINEINYQSPLPLCKPKAKSVPTPVSAQMTSKSCSKEEKEISDPKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKDLNFPQMTPPKKFNELSLLEKDSIADEELALINTQILLSGSARENQLISISGSTRTPPTSSKDYLGQKRHCATSMTKEQENPQTSTEECETSLQDIHTTKNRSKRLQRQQKRK</mol_seq> | |
379 </sequence> | |
380 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">dasypus_novemcinctus</property> | |
381 </clade> | |
382 <clade branch_length="0.056068"> | |
383 <name>ENSCHOG00000008817</name> | |
384 <taxonomy> | |
385 <id>9358</id> | |
386 <scientific_name>Choloepus hoffmanni</scientific_name> | |
387 </taxonomy> | |
388 <sequence> | |
389 <accession source="Ensembl">ENSCHOP00000007822</accession> | |
390 <name>BRCA2-201</name> | |
391 <location>GeneScaffold_3963:155-56284</location> | |
392 <mol_seq is_aligned="0">MPVRAKKRPTFFEVFKMRCSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFREQGLTLPRHQSPLNESDNYRLDLGNDIAHSKHRSHCTVRAKMDQASDVTSPPLNSCLSESPVLRRTNVTPQREKSXXXXXXXXXXXXXXGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEAPETISFNDTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKTLENSFDEVNSCEDHFGKSVPNVLEDDIRETVVDISEEDSFSFCVTKYKTENIKEIKTGKTRKKKLSKTVTDKEAKKEMHENKHSFASEMEPNNSDPLDSHVTTQKPIGNGSDRISKEVVPPSASKQSQQTPSGPNRTQIDKIPLICISACDQNNPKKDQIGTKRMANFISSENSLPHILSLPKPEKILNEEIMINKRDGVQYLESHEECVLPVQPAISGSSPVASPFQGIKKSIFRIRESPVETFSTVFSGNMNDSNCKGELEASESGLELYAVFSQKESSLCPSSVDNESRPTPTKQTSVTSKNAGLISTLKKKTKKFIYAVNDKTSCEREKVQKDQESELTNCSTHHEADAFEAPPTSTQAGPGILHSSVKRNCLQYDHEKQTWSLTSSFGMTLRKCSNNESIFSNNKITAQDLDYKEGKNNKEELQSFIATEADHRSCLQGRHCEDDPKSQRISDIKEKGLATACHPIIQPSGEECSDIHIQSQKSLLYDHKNACTFLLTLSSKDPPSNPVMISREKESYKMSGELEYKNCEANFELTKNIPTEKKQEIHVLNENSEEAELLLPKKLVKVTSPSMKIQFNQNTDLTVIQKDQSNFKKTSLISKIMISANSEELFPENENDFACQITNKRNMTILENTKELNETDFRCVKEPVLKNSTTVVYTDRGDEQAAQAFITNSLDSLNVVPHLTEKDGNSVKQHLNMALGQGLKSYISLDIEVKSNRNHDYLNRWAGLLNPISSDNFGCGFRTASNKEIKLSEHNIQKSKMLFRDIEEQSANSLACIEIVNTLSLDNQKKLNKPCALDSQAANNVSVDVQSIAFVSDSENIKTTPQNLSLKQGFNSNYNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIMQNNKFEVSEKQMTVLNNTFEKWEDADPDLTINAPPITQIDSSKELERTVRNKQKSAYLLKNNCNKSASGCLTDKNEEFKGFYSALGTKISISSESLQHALKLFSDIESISEKTSAEIDPRSFSSRKCHDSISVLKTENCNNDKHFNEKDDKSQLILQNDIEMTPGVFVEENTENYKRNSENEENKCTGTDRNPCHLGESDGNDSGENDTAYIRKDENGLPYIDQHNIYLKISSQCMKEGNTEIKEGLSDLTCLEVVKAEETFNVNTSNKEQLTANKMGQNGKDFDILYLPFQTASGKNIRVSKESLNKVLNFFDENCTEELENFSASFNSELLPGIKNEMDISNLEESNLVKNNIQKGSIPVGTENQLPVLQQQPECELEKIKEPTMLGFHTASGKQVNITKESLDKVRNLFDGKMQDNVTEITDCSHLGTETLKERKECKEGLELACETFEVTTLPKQEEMQNSLDDNEKNLIYTETTMLPRLLNDNLCRQTKILKTSNSISLKVKVHKNRGKETAESPTACSTNQSTCSAIENSALAFYTGHGRKISVNQSSLYEAKKWLRKGELEDQTGKISAVDCVENPSYENSLNSIITGDDKNHLFEKADSVYLSNSGMSNSCSHHSYFCHSDEVYNKSGFLSKNKIDNSNIDPVVENVKDRKNTSFSEVPSTLREANAYPQTGNEDTCIQKPVSAFSPQKSKNATLKLAISDSDNFVVGPPAFSTASGKIVCVSHETIKKVRERFIENHGNVIKQNTESKSDPCQTKIVAGCYQALEDSEDVIFPSSLEGKEGAMHSHKDFADIQSEQILKYNQNMSGLEQVSKISSGQANLKTPDTCNFNIGKLPKSPTSTNACGIFSTASGKFVQVSDASLQKASQVFSEIEDSAKQFFSKVSFKINEEHSDKFTEESTMTHQQQLLPQKDFLYNVVKSSAYSGFNTASGKQVLISESSLNKVKGPEVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKQALPKNKKEIGKPETFSNLPMKTNREVCSTYSKDPENCFETEAVEIAKAFMEDGELTDFELLSHAKHSLFTCQRNETVLLNPRIGRRRGNTLVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKEGQEIQNPFTPPNQEFVSKSHVFKHLTLEKSSSNLSVSEKPFYKVFATGNEKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFITKLQNARDTQDMRIQKKQRQRICPQPGSLYLAKTSSLPRISLKAAVGGKVPSTCSHKQLYMYGVSKHCIKINSKNAESFQFRAQDYYGKECLWAEQGIQLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISRSWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIISLSTNISETSSSKASSVDTQKVANVELTDGWYAVRAQLDPPLMALIKNGRLAVGQKIIVHGAELVGPPDACSPLEAPESLMLKISTNSTRPACWYAKLGFFPDPRPFPLRLSSLFSDGGNAGCVDVIIQRAYPTQWMEKTSCGLYIFRDERAEEKEAAKYAEAQQKKLEALFAKIQVEFEEQEENATKPCVPSRALTRQQVHALQDGAELYEAVRHAADPEHLESCFSEEQLRALNNHRQLLNDKKQAQMQLELRKAIESAEQGVQGLSRDVTTVWKLRIISYERKQKDSVILSIWRPSSDLYSLLTEGRRYRIYHLATSKSKSKSGRVNIQLTATKKTQYQQLPASDEILFQVYQPRKPLHFTKLLDPDFQPPCSEVDLIGFVVSVVKKIGHAPLVYLSDECHNLLAIKFWIDINEDIVKPSMLIAVSNLQWHPESKSAFPTLVAGDFSVFSANPREGHFQETFNKMKNTVENIDMFCCDAANKLMHILNANGPKWSTPAKDYTSEPYAAPAVLGTGKKFLMSPPINETNHQSPLSLCKTKGKSVPTPLSAQMTSKSCKGEKEIDDSKNCKKRRAFDFLSRLPPPPPVSPICTFVSPAAQKAFQPPRSSGTNCETPTREKDLKSPQMTPSQKFSEISLLENDSIADEELALINTQTLLSGSAGENQLISISESTRTAPPSSKDCLGRKRRCVASVTAEQSSQIGTEEGQAALQTTSTRKRSE</mol_seq> | |
393 </sequence> | |
394 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">choloepus_hoffmanni</property> | |
395 </clade> | |
396 </clade> | |
397 <clade branch_length="0.011526"> | |
398 <confidence type="bootstrap">2</confidence> | |
399 <taxonomy> | |
400 <id>1437010</id> | |
401 <scientific_name>Boreoeutheria</scientific_name> | |
402 </taxonomy> | |
403 <clade branch_length="0.008809"> | |
404 <confidence type="bootstrap">14</confidence> | |
405 <taxonomy> | |
406 <id>314145</id> | |
407 <scientific_name>Laurasiatheria</scientific_name> | |
408 </taxonomy> | |
409 <clade branch_length="0.004506"> | |
410 <confidence type="bootstrap">7</confidence> | |
411 <taxonomy> | 618 <taxonomy> |
412 <id>314145</id> | 619 <scientific_name>Euarchontoglires</scientific_name> |
413 <scientific_name>Laurasiatheria</scientific_name> | 620 <id>314146</id> |
621 <common_name>Primates and Rodents</common_name> | |
414 </taxonomy> | 622 </taxonomy> |
415 <clade branch_length="0.018072"> | 623 <clade branch_length="0.095547"> |
416 <confidence type="bootstrap">99</confidence> | 624 <name>ENSTBEG00000015907</name> |
417 <taxonomy> | 625 <taxonomy> |
418 <id>9397</id> | 626 <id>37347</id> |
419 <scientific_name>Chiroptera</scientific_name> | 627 <scientific_name>Tupaia belangeri</scientific_name> |
628 <common_name>Tree Shrew</common_name> | |
420 </taxonomy> | 629 </taxonomy> |
421 <clade branch_length="0.107453"> | 630 <sequence> |
422 <name>ENSPVAG00000000246</name> | 631 <accession source="Ensembl">ENSTBEP00000013856</accession> |
423 <taxonomy> | 632 <name>BRCA2-201</name> |
424 <id>132908</id> | 633 <location>GeneScaffold_2732:1286-173851</location> |
425 <scientific_name>Pteropus vampyrus</scientific_name> | 634 <mol_seq is_aligned="0">RDEETSETVFPNDTSAILKSYFSNHDESLKKNDRFIPSVKDNENKSQRETGSHGLEKILDNSFSEVNYSKDHFEESMTKILEDEVHDTVADISEEDSFSLCFSKYRTGNLQKVRTSKTRKKILPETKTHECEEAKKQRNENIYSFTSKMKPTDSAPLDANVTNQKPLGCGSDKISKEVLLSSASEWSQLKISELNRTQIEKISLLHSSSCDQNNSEKDLINIEKECINFSTSENSLPHISSLPKSEKILNEETVANKKDTRQYLESHGDSLLAVGQARSGTVITSPLQGIKKSIFRIRESPEETFSTVFTDDTTNSNFKETEASESGLQKYTVCSQKEDSLCPSSINGSWPVTATHTSVSLKSTGLISTLKKKTKKFIYAIKDEASYQGKIIQKDQQSELTNSPTHYEANAFETSLKIADSGLLPSVKRNCLQDDSEEPTLSVVNSFGTMLMKFSINKTSSNNPIIFQDLDCKKAKNNKEKLQSFIAPEADYLSCLLERQSKDDPKSQEVSDIKEKVLATTCHPTVYHSEVEHSGTHFQFQKSFLYDHDNTNPLTLTPSSEDPLSNTVVISREKESCKMSEKLKYKKCEASFELTKNMPVAKTEEMCALNENSEEAELLPPKKYIPIVPPSVKMQFNQNIILTIGKAQKETILRSEITGSLNSEELFPDNENSVFQVTKGRNNPVLGNTEELHEVDLSYIKEPILQNSAMVTCTDTDDKQPAQILITKDLDSSDTVCGLIGENNVKQNQKMTLGEDLKSDILDVDLKSNRKNDYMDKWSGLLDPVSNHSFGGSFRTASNKEIKLSEHNVTKSKMLFKDIEEQYPTSLACVEIVSTLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNFVEENTENYKRNTENKDSKYTGANRNTCNLGESDSSDSDKNNTVHKDKNDVASADQHNICLKLSNQVIKEGNSQSKESLSDLTCLEVVKAKETCHVNTSNIGQLTASKMEQNIKGFEIFDISFQTASGKNIRVSKESQNKVVNFFDQKPEEELNSCSLNSKLISGINKNKMDISNHEEIDLVKNETLKKGILVDTRNPLLTLQQQPKCETEMIKEPTLLSFLTASGKKVKIAKESLDKVKNLFDEKELDNSEIISFCHERAKTLKDKDVYKEGPEITCETAETTVPKHEGIQNSLDDDEKNLVFNETAVLPRLLSDHLYGQTENCKTANTSSLEVKVHETVEKETVNIPTTCYTKQPPYSTMENSALAFYTGHGRKISVSQMSLNEAKKWLREGELVDQPEKISTADYVGKLSHENSSNNIIAESEKKHLSKRQGLTYLYNSMSNSYSYRSDFCHSDELYNDSGYLSKSNIGSGIEAVMKDVKDKINTSISEVMSTVRETNTYSQTVNEDTCVQKLTDSSLCKNKNATTKLAISDSNNFEVGPPAFSTASGKIVCVSHEMIKKVKEIFSDNCSKILKQNTENDSGSCQACGDSENIFPNAIDDESSMCSHKIFVDIQSEVLQPNESKSGLEKVSEMSSCHVGLKTSDKCKFNIEKLPESVPFTNACGIFSTASGKSIHVSDVSLQKARQVFSEIEDNAKNNEHLDQFTREENTMTHTPECLSPKKGFSYNKINSSAFCGFSTASGKRVAVSESALHKVKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKDQENCFETEAVEIGAFMEDGELMDFSTDHAKRSFFTCQKYEEIDLLNSRIRKRRGTLVTVGEPPIKRNLLNEFDRIIENQEKYLKASKSTPDGTIKDRRLFMHHISLEPVTCGPFCASKEQKEIQKPNFTIPGQTFLSKSHFYEHLTLEGSSSNLSVSGQPLNKVSATRNEKIRHSITTDKPTKVFVPPFKPKSFHREEQCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTSLQNARDIQDTRIKKKQSQCVFPQPGSLYLTKTSTLPRISLKTAVGGRTPFARSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRIWVYNHYRWIVWKLAAMEFSFPKEFANRCLSPERVLVQLKYRYDIEIDGSRRSAIKKIMERDDTAAKTLVLCVCDIISSSTNISEISSSKTSSVDTKKVATIELTDGWYAVKAQLDPPLLALVKNGKLTIGQKIITHGAELVGSSVACTPLEAPESLMLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYAEAQQKKLEDLLTKIQADFEAHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESSEQGIQGLSRDVTAVWKLRVTSYGQKEKDSVILSIWRPSSDLYSLLTEGKRFRIYHLATSKSKSKSERASIQLAATRKTQYQQLSASDEILLQVYQPRELLHFDRLLDPDFQPPCSEVDLIGFVVSVVKKIGLTSLVYVSDECHNLLAIKFWVDLNEDIIKPHLLIAASNLQWRPQLKSGIPTLFAGDFSMFSSSPKENHFKERFNKMKNTVENIDTFCSEAENKLMCILNANDPKWSTPTKGYTSEPIIATGNKFMMSSPNSEINYRSPLSHCTPVEKSVLTPGSAHMTSKSCKGEKEIEDPKDCKKRRALDFLSRLPLPPPISPICTFVSPAAKKAFQPPRSCSTKYETPIKKKEFNSPEMTPVKKYNEICLLESNSIADEELALINTQGLLSGSAGENHLTSPGESSQTAPTSSEDYLRLKRQDTTSLTKGQENSQTSTQKNEAKMEDISTKKYI</mol_seq> |
426 </taxonomy> | 635 </sequence> |
427 <sequence> | 636 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tupaia_belangeri</property> |
428 <accession source="Ensembl">ENSPVAP00000000225</accession> | |
429 <name>BRCA2-201</name> | |
430 <location>GeneScaffold_1816:16170-64885</location> | |
431 <mol_seq is_aligned="0">LGPISLNWFEELSSEAPLYNSETAEDSEYKISSCEPNLFKTPQRKPYQQLASTPVIFKEQDLTLPLYQSPLKGLDKDRLNLGKDVTNSKHESCCTMKTKTDQANDITSPPLNSGLGESPGVPRCTHVTPQREKSAVCGSLFHTPKLMKGQTPKHISESLGAEVDPDMSWSSSLATPPTLSATVLIVRDEEASAAVFPNDTTTILKSYFSNHDESLKKNDVFIPSGPDNENKNQREARSHGWGNSFDKVSSCKDHFRKSVPNVLEDDVHENVADVSEEDSFSLCVSKYKTRNVQKLKTSKTRKNIFSETKTNECEEAKKQVRENKHSFVSEMGPNDSDPLDSSITDQKPFGNGSEAVSEAVLPSSATGWSPLTLSGLNGTQMDKTPLLHISSCDQNNSEKDLVGTGKECTNFVTLENSLPCISSVPKTETLLSEETVVNKRADRQCLESPTRAVKHALAETSLMASPLRGVEKSVLGIRELPEETSSTVFSNNMTDPDFKGELEASEGRSEIHTVCSQKDSSLCSSYVDGSWPATIIHTPVALKNTGLISTLRKKTRKFIYAVNDETSHQGLKMQKCQESGLNNHSAQFEADTFEVPSTVTNASSGLLHSSVKKNCLQNDSEELTLSSTSSLGTIPRKCSNSESNSCNNKIISQDLEYKEAKIYKEKLQSFITTGTDCLSRVQEKHCEDGPKSLRVSDIKETFLPTVCHPAVPQSEVQCSGIHFQSQESFLRDHDDTSILTPSSRDPPSNPAVISKEKESYEVSEKLQYKNCEAGFDLTKNILVEKNQEICVLNENSKKAELLSPEKTTTIASPSVTVQFNQNTNLTLIQKEQEETTSVSKITANSNSKKLFQDSENDFVFEITTEKNMPVLENFKELHEADLGCVRGPVLKSALVVDHKQASKGSVIKGFDSSNKIHDLTEKDRNNVTQQLKMTLSEDSKSDISLDIDEKSSRNDDCMDKWARLSDPISNHNFGNGFRTASNKEIRLSEHNIKKSKVLFKDIEENFCTDLAYVEVVNISSLENQKKLSKPHALNSQSTDIGSGCVQSRAFVSNSEYSHTTPPTLSLKRDFTSDHNLTPSQKAEITELSAILEESGSQFEFTQFRKPSHMIQNNPFEMPESLMPVLNAACEEWKDVDLHLTINAPSIGQAESSREFESKQKFACSLKTNCNKSTSGYLTDKNEAMFRGFYSAHGTKLNVSSEALQKAKKLFSDIENISRETDAEIDPRNLFSNKCDHSVVWMFDLENYNDKSPNEKNNKCQLIQQNNTETTTGVFVEENTVGHKKNTENEDNRCADASRNICNLGESDSSDSSKDGTVYVHEDENGWPRVDQHKVHVKPPSQYTREGNTQVKDSVSDLTCLEAVKAEETRHVNMSAKEQLTANTTGQNIKYLDVLDISFQTASGKKISVSKDSLNKVVNFFDQKCAEELNNFSDALNSELLSGINVNNMDISSHEETDMVKEKTLKESDPVCVNNELPALLPGPKCEIEKIKEPTMLDFHTANGKRVKIAKESLDKVENLFDEKRYNSEATHFSHQGTKMLKDIEECKEGLKVAHETVEITAAPKCKEMQNSLEEKKFVSNKTTMLPGLLSDNLYRQNENLKTSTSTSLKIKVHETIEKETAKSSTTHYVNPSVCSATENSVLAFYTGHGRKISVRQTSLLEARKWLREGEWDDHPEKTNAAYCVENLSCGNHSNSVITKNDKNASDKQDSAYLSNSSMSNSSSYHSDFCHSDEIYNKSESLSKHKMGNSGIEPVVTNVADGKTTGFSEVKSTVIEAHTYPQTVNEDICVQKFVTNSSPRKNKDAATGEAGSNSNDFQIGSPAFSTAGGQVVLASRGMKARERFTDACTKVIKQDSECESGPGQTQTEAGDDSEDIIFPNSPDTVPSYKVFADIQSKRSLQHSQRMLGSEEVPEMSPRWLDSKTSGVCKLNTGPPAKSVSSMQACGVFSTAGGKLVQVSGAALQKARQIFSRLEDSAEQLGARIAFEHDEDHSENATRKDDTVIRTPQMSSLTFSGFSTASGKQVSVSESAFIKVKGMLADFDFNRAECALQRPPSPRQDGSQMPPRSWIDKGAREHSTDSEMEKAYSEEFKLPNNSPTETGPSERIHSTGVSTNPSQLQEDEQRLILRGKASLVEVGHLLGKEQVLPKNMKVEIGKTETCPILPMKNIEISSYSKDPENYFETEAVEIARAFMEDGELTDSELRSRPARALACQNSGETSSLNSRTGKRRGEALFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTINDRRLFMHHVSLEPITCAPFCTSKERRETHTPHFTAPGQEFLSKSHFYEHLTVEKSSSNVSVSRQAFCKVPATRNEKRHSITTGKQMKVFVPPFKTKSHVHEDEQCVSSCTTLEECKQKQKHIGKHNSGVSENNIDDSEICQPNKDNASQAATIMSTKCEEPPLDLIPSLQNARDMQDMRIKKKHGQRVCPQPGSLSLARASGMPRVPLRAAVGGCPPSACPPEQLYMYGVSKHCVKINSKNAESFQFHVQDYFGKESLRAGKGIQLADGGWLVPSDDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFASRCLNPETVLLQLKHRYDIEIDRSRRSAIKKIMERDDTAAKTLVLCVSEVILSSTHLSETHSGKTSGAEASKAAVVELTDGWYAIRAQLDPPLSALLQTGRLGVGQKVVTHGAELLGPPEACSPLEASETLMLKISANSTRPACWDAKLGFCTDPRPFPVPLSSLFSDGGNTACVDVVIQRAYPVQWVEKTSSGLYIFRNEREEEKEAAKYAETQQRKLEALFTKIQAEFEEQEENISRQCLPSRALTRQQVRALQDGAELYEAVRAAPDPAYLESYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAVESAEQGDQVSSRDVTTMWKLRIISYEKKGKDSILSIWRPSSDLYSLLREGQRYRIYHLATSKPKNKSGRANLQLTATKRTQYQQLPASDGILVQVYQPRRPLPFPQLSNPDFQPPCAEVDLIGFVISVVRKIGLAPLVYLSDECHNLLAVKFWIDLNEEIIKPHVLIAASNLQWRPDSKSGIPTLFAGDFSMFSASPKEGHFQETFHKMRNAIENVDIFCNEAENKLMQILHANNHQWSTPTKRCTSESHAAQTALGLGSRLLMSSPTNEMNSQSPSALCKAKGKSVPTPPSAQKASKSCCKGEKEVDDPKTCKKRRALDLLGRLPLPPPVSPICTFVSPAAQKAFQPPRSCGPKYETPMKKKELNSPQTTPLKKFNDNSLLESDSIADEELALINTQALLSGSAGENRLAPPGDPTGAANCSKGDLGPPGSPPPCVGRERPHSRASAQELGPHMQDASMITNLPR</mol_seq> | |
432 </sequence> | |
433 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pteropus_vampyrus</property> | |
434 </clade> | |
435 <clade branch_length="0.064576"> | |
436 <name>ENSMLUG00000013741</name> | |
437 <taxonomy> | |
438 <id>59463</id> | |
439 <scientific_name>Myotis lucifugus</scientific_name> | |
440 </taxonomy> | |
441 <sequence> | |
442 <accession source="Ensembl">ENSMLUP00000012516</accession> | |
443 <name>BRCA2-201</name> | |
444 <location>GL429786:4166192-4250116</location> | |
445 <mol_seq is_aligned="0">MPIGCKERPTFFEIFETRCSQADLGPISINWFEELSSEAPPYNSETAEESEYKSSSYEPNPFKTPQRKPYHQLASTPVIFKEHGLTLPLYQSPLKELDMDRLDLGKHVTNSKYKSCCTMKAKMDQANDVIIPPLNSCLSESPGILRCTHVTPQREKSVLCGSLFHTPKLMKGQTRKHISESLGAEVDPDMSWSSSLATPPTLSATVLIVRDEEESSAVFPNDTTDILKSYFSDHDEGLKENDRFIPSGPNNEIKSQREAKSYGLGNPLGKVSGCKDHFGKSVPNVPEDEVHEKVGDISEEDSFSLCVSKYKKRNLQKIKNGKTRKNIFSETKNDECEETTKKQIKDNKQSFISKMEPNDSDPLDSKLRIQKHLGNGSGRISEEAVQSPVFEWSQLTLSGINGTQIGKILQNSSCDQNNSEKDLIGTEKECTNFITLENSLPRISSVPKTEKILSETSLIASPLQGIKKSRVRIRESPEETPSAVFSNNMTDLNFKEDPEASEGRLEISTIFSQKESSLCTSSINNGSHPVTIKHTSVALKNTGLISTLRKKTKKFIYTINDETSYQGLKMQKDQESGLTNYSAQFEENTFEAPSTVLNADSECIHSASVGKNCLQNDSEEPTLSLTSSFGRILRKCSNNESSSSNNEIISQDLDYKEAKINKEKLQSFITTETDHLSCLQEKYCEEDPEHQILDIKEKVLPVIFHPAMPHSEMKCSGIHFQSQESILYDLDNTSILTSGSKDPPSNPVVISRGKESYEASEKVKFKNCEPGFNLTKNIPMDNQEICVLNENSEKVELLSPEKYTILASPSLKVQLNQTTNLTVTQNVQEKTTSISKITVNSNSEELFQDNKKDFAFEIIDEWNIPLLENNEELQEADISCVREPILKHSIMVVDTGTDDKQVAKASITKDFDSSNVVHDLTENRKRVMQKMILGEDSKADMSLDIDKKSNQNNDYMDTWSELSDPISNHNFGHGFRTASNKDIKLSEYNIKKSKEFFKDIEEHFTTTLACIEIVNPSLLENQKKLSKPHPLDGQSTDTASGCEHSSALASDSENSHTTPPTSSLKRDFNSNHNLTPSQTAEITELSTILEESGSQFEFTQFRKPSHMMQNNPLEIPENQISALHTTSEEWEGVDPLMDSSRKLEDKQKSACSLQTSCNKNAAGYSTDKNEVEFRGFYSARGTKLNVSSEALQRAVKLFSDIENISEETSAEVDPRSFSSSKCNDTIVSVFQMENCNHKNFNEKNNKYQLVQQNNIEMAAGIFVEENSEDQKKNTASEDKSIGARRNICNLGESDSHDLNKNDTVCVHKDENGLPCVIDQHSIHLKSSGQFMNGGNTQVKEGVSDLTCLEVVKAEEICHVHTSNKQQLTASKMEQNIKDYDIFDISFKTASGKNVRVSKDSLNKAMNFFYQKCAEEELNNFSDALNSELLSGINVNKIDISSYEATDMVKDKTLKESDSVGIENQLLTLQTEPECEIEKIKEPTMLGFHTASGKKVKIVKEYLDKVKNLFDEKKQDSETTNYSHQRVKMLKDREECKVGFPLACETVEITTAPKCEEMQNSLMEKKLVSNEFAMLPGLLSDNLYRQTGNFKMSNSVALKIGNVEKETAKSPTTCYRNQFTCSASKNSAVAFCTGHGRKFSVNQASLLEGELDDQPEEINAAKVTCLKDNPEDYVENPSCGNHSNSIIIENDKNHLSEKQDSTYLSNSSMSNSNSDHSDFCHSNEIHDKLESLSKKGDNFGIEPIVKNVKEKKHTNFSEVIATIREANTYPQTKNEDTCVQKFVTNSSPYKNKKTDMEVAVSNSNNFEIQSPAFSTASGQMVSVSHGMKVRERFADNCTKVIRINTENKSGTGHTKTLTGYHEVVGDSEDFIFPNSLDSEEHSMHSYKVFTGIQSEQILQHSQRMSRSETVSEMLPCQSNLKASATCKFNTVSNACGIFSTASGKCVQVSDAALQKTRCIFSKLEESAEQLFSKVSFESNEEHSDRLTREENTMIHIPPNLPSPAFSGFSTASGKQVPVSESSLNKVKGMLEDFDSLRTEYGLQNSPTSGQVVSKLPLSCIDKRTPKYSASCKMEKACNKEFKLSNNCNIRSGFSENTPSLETLPCLSQFKQDEQPLVLGNKVSLVGSSHILGQEQALPKNIKIDMKPETYPNLPMTTNTEICSTYSKDPENYFETEAVEIAKAFMEDGDLTDSELLSHPEHFLTCQNKEMALLNSRTGKRRGDALFLIGEPPIKRNLLNEFNGIIENQEKSLKASKSTPDGTIKDRRLFMHHISLEPITCGPLCTTKERQKIQTPNFTEPGQEFLSKSHFYEQPTLEKSSSNLSISGQPFYKVPATQNKKRRYSITTGKPVKVFVPPFKTKSHFHRDNQCLGSNTDLEENKQKKENIGEHGSGHSKNNINNSEIHQPNKDNSNQVATIISTKCEEEPLDCIANLQNARDVQDMRIKKKHGQQIFPQPGSLYLAKTSTVPRISLKVAVEGQVPSACSHKQLYMYGVSKHCLTINSKNAESFQFHTQDYFGKEASWAGKGTQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRGWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEILSPTTSLTETSNSKTSGVDTSKTAIVELTDGWYAVKAQLDPPLSALVQKGRLAVGQKIITHGAELVGSPDACAPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVIQRAYPMQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQRKLEALFTKIQAEFEEHEENITKQCTPSHALTRQQVCALQDGAELYEAVRTVPDPSYLEGYISDEQLRALNNHRQMLNDKKQAQIQLEFRKAVESAEKGEQMLSRDVTTVWKLRIISYEKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKTKSGRANIQLTATKNTQFQQIPASDEILFKVYQPRDPLPFGQLLNPGFQPHCSEVDLVGLVVSVVKKIGLAPLVYLSDECHNLLAIKFWIDLNEDLIKPHMLIAASNLQWRPESKSEIPTLYAGDFSMFSANPKESHFQETFHKMKNTIENIDRFCNDAENKLMHMLNAKDPKCSTPTKDYTSEPHTVQTVHGRGNTFLMSSPKSEMNYQSSLSLCKPKGKSVPTPVSAQMTSKSCKGEKEVDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELSSPQITPLKKFNDISVLESDSIADEELALINTQTLLSCSAGKKQLVSMGESTGTAPTCSRYDLERKRHHFTPMVTEQNSHISTGETGDSIQDTSTIQDTSKGLQRQQNRK</mol_seq> | |
446 </sequence> | |
447 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">myotis_lucifugus</property> | |
448 </clade> | |
449 </clade> | 637 </clade> |
450 <clade branch_length="0.000302"> | 638 <clade branch_length="0.005324"> |
451 <confidence type="bootstrap">5</confidence> | 639 <confidence type="bootstrap">62</confidence> |
452 <taxonomy> | 640 <taxonomy> |
453 <id>314145</id> | 641 <scientific_name>Primates</scientific_name> |
454 <scientific_name>Laurasiatheria</scientific_name> | 642 <id>9443</id> |
643 <common_name>Primates</common_name> | |
455 </taxonomy> | 644 </taxonomy> |
456 <clade branch_length="0.027617"> | 645 <clade branch_length="0.019155"> |
457 <confidence type="bootstrap">100</confidence> | 646 <confidence type="bootstrap">100</confidence> |
458 <taxonomy> | 647 <taxonomy> |
459 <id>33554</id> | 648 <scientific_name>Strepsirrhini</scientific_name> |
460 <scientific_name>Carnivora</scientific_name> | 649 <id>376911</id> |
650 <common_name>Wet nose lemurs</common_name> | |
461 </taxonomy> | 651 </taxonomy> |
462 <clade branch_length="0.010565"> | 652 <clade branch_length="0.039675"> |
463 <confidence type="bootstrap">100</confidence> | 653 <name>ENSMICG00000011994</name> |
464 <taxonomy> | 654 <taxonomy> |
465 <id>379584</id> | 655 <id>30608</id> |
466 <scientific_name>Caniformia</scientific_name> | 656 <scientific_name>Microcebus murinus</scientific_name> |
657 <common_name>Mouse Lemur</common_name> | |
467 </taxonomy> | 658 </taxonomy> |
468 <clade branch_length="0.043063"> | 659 <sequence> |
469 <name>ENSCAFG00000006383</name> | 660 <accession source="Ensembl">ENSMICP00000010933</accession> |
661 <name>BRCA2-201</name> | |
662 <location>GeneScaffold_1468:1090539-1158098</location> | |
663 <mol_seq is_aligned="0">LGPISLNWFDELSSEAPPYNSEPAEESEYKISSYEPHLFKTPQRKPSYRQLASTPIIFKEQGPTLSLYQSPVKELDKCRLDLGNNVANSKHKSRHTVKAKMDQADAVTSPLLNSCLSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRGEDASEIVPNDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKMLGNSFDKANSCKDHFGKSIPNALEDEVHEAVADISEEDSFSLCYSKYRTENLKKVRTGKTRKKVFHETKTGEYEEPKKQLKEKHSFASEMKPKDSDPLDSNVAKQKPFGNGSDKISKEVLESSACEWSQLTLSDNLSRTQMEKIPLLHISSCDQNNSEKDLVDSEKEYTNFITSENSLPHISSLPKPEKMLNVETVVNKGDESHEDSILVVKQISRIPSIASPFQGIKKSIFRIRESPEKTFSAVFSGNMTDPNLKEKSGTSESQLELYAICSQKEDSLCPSSIDKSWQATITDTSVPLKNAGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNYSAQFEANVFQAPRTFTNVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANKNDYMDEWVGPLYPVSNHTFGGSFRTASNKEIKFSEHNIKKSKLLFKDIEEQYPTSLNCVEIINTLALDNQKKLSKGHEFVSQSVNTVSACAQSSPFVSNCENSDIPPQMLDFNSNNNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIIPNNTFEVPANKMTVLNTTEEWKDVDLNVTINASSIGQVDNSKKFEGVVGVKQKFTYLLENNCNKSVSGYLTGENEVEFRGFYSALGKKLNVSSEAMQKAVKVFSDIENINEEPSIEVDPRSFSSSNYNDSVVSMFKIENHNNDKNLNEKNKCQLILQNNIEMTTGTFVEENIENYKRNTESENNKCTATSRNTCNIESDGHDSNKNDIVYIHEDANDLPGTDQHNLKLSSQFMKEGNTEIKENLSDLTCLEIVKAGEACHVDTSHKQLTASKIEQNIKDLGIFDISFQTASGKNISISKESLNKVNFFDQKTEEELNNFSLNSKLLSGISKNEVDILRNKETDMFENKILKESIPVGTGIQLATLQQQPECEIEKIKEAMLLSFHTASGKKVNIAKESLEKVKNLFDEKKQYIDEITSFSQGLKIQKDRGDCKEGLILACETVEITTVPKCEEMQNSLDDNEKNQVSNTVLPGPFSDHLHRQSENLKTSNDISLKVKVHENVEKETAKSPTICYTNQSPYSAIENSALAFYTGHGRRISVSEASLFEAKKWLREGELGDQLEKINTANYGGNPSQESASNSIITENDKNHLSEEQDSTYLGNSNLSNNYSCHSNSCYSHEVYNDSGYLSKNIIDSGIEPVVKNIEDKENSSFSEIISIVKEANAYPQTVHEDTCVQTLVTNSSLCKDENTSTKLSVSNSNNFEVGPPAFSTASGKIVCVSHETIKKVKELFTDNGSKVIQPNTESKSGACQTKIGAGHYKALNDSEDIIFSNSDKVVDEECCMHSHKVFADIQSEQLLHDQSMSGLEKVSKKAPCNSSLKTSSICKFNTGELPKSVSSTNACGIFSTASGKSIQVSDASLQKARQVFSEIDDSAKQLFSKISFKSNKYLDQFREKNMHIPLISPKGFSYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVEIAKAFMEDGELTDSEPSHAEHSLFTCQKNEETVCLNSRSGKRRGDDLVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKDRRLFMHHISLEPVTCGPFGTTKERQEIQSPNFTAPGQEFLSKSHFHERLALEKSSSILSISRQPFYKVPATRNEEMKRPVTTGKPTKIFVPPFKTKSHFHRDEQCVSKNINLEENKQKQNIDKHGSGDSENNINDSEIHQLNKNNSNQAATVNVTKREEEPLDLITGLKNARDIQDMRIKKKQKQHIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLTSRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLEAPESLMLKISANSTRPTCWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCADVIIQRAYPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTKQYIPSRALTRQQVHALQDGAELYEAVKNASDPGYLEGYFSEEQLRALSNHRQMLNDKKQAQIQSEFRKAMESAEQDKQGLSRDVTTVWKLRVVSYAKKEKDSVILSVWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSKKANIQLAATKKTQYQQLPASDEILFQVYQPREPLHFNRLLDPDFQPPCSEVDLIGFIVSVVKKTGLAPLVYLSDECHNLLAIRFWIDVNEDIIKPHVLIAASNLQWRPESKSGIPTLFAGDFSVFSASPKESHFQETFNKMKNTVKNIDIFCNDAENKLMHMLSNNPKWSTPTKDYTSEPYTAQ</mol_seq> | |
664 </sequence> | |
665 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">microcebus_murinus</property> | |
666 </clade> | |
667 <clade branch_length="0.070271"> | |
668 <name>ENSOGAG00000010588</name> | |
669 <taxonomy> | |
670 <id>30611</id> | |
671 <scientific_name>Otolemur garnettii</scientific_name> | |
672 <common_name>Bushbaby</common_name> | |
673 </taxonomy> | |
674 <sequence> | |
675 <accession source="Ensembl">ENSOGAP00000009477</accession> | |
676 <name>BRCA2-201</name> | |
677 <location>GL873639.1:315573-415772</location> | |
678 <mol_seq is_aligned="0">MSVGSKERPTFFEIFKTRCNEADLGPISLNWFEELSSEATPFSSEPVEESEYKIISYESHVFKTPQRKPFYRQLASTPLIFKEQGPTLPLFQSPVKELDKCKLDLGNNIANSKHKSHHTGNAKMDQAGDVTSPLLSSRLSESPVLQYTHVTPQREKSVVCGSLFHTPKFVKGQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRSEDASEIVFPNDTTAILKSYFSNRDESLKENDRLISSVTDHENKNEREARSCGLGKILGNSFDEVNSCKEYFGKSVPNILEDKVRKAIADTSEEDSFSLCFKYKTRNLRKVRKDNTRKKVFHETKTGEYEEAKKQIKEKHSIISEMEPNDSDLLDSNEAKQKPFGNESDKISKEIVESCASEWSHLTLSGLSGTQMEKISPLHISCNQNNSEKDLVDTEKECTDFITSENSLPCISNIPKPEKILNEKTVVNKGGEPQHLESYEDSILAVKPAISGIPRTASLFQDINKPIFKIRESSEETSSAVFMGSMTDPNVKEETETSESNLEIYTICSQKEDSLCPSSIDDESRLATIAHTSVPLKNTGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNCSAQFESNVFQAPLSFTNDNSGLLNSSVKRNCLQNDSEEPALSLTSSCGTLLRKCCHNKSNSPNNPVISQDFDYKEAKINEEKLQPFITSEMDYLSCQQERQCENDPKSENVSAIKEKVLATACYPVVHHSEVECSGMHIQSQKSLLYNHDNTSTLTLSSKDPWSESVVISSKKESYKMSEKERRKSCKVGFELTKNIFAEKNQEVCSLNENSKNAEPLLPENYITASPSVKVQFNQNKNLSMIQKEETTLISKILDNPNSEELFQDNENFVCQVTNGRNNLILGNSKELPEADLSCVKEPFLENSTMVVHADVGDRQAVQVLITKELDSSDTVYDFPEENRNSVKQHLKVTLDQDLKPDTSLVIDKKSNKNDCMDKQAGLLNPISNHNFGGGFRTASNKEIKFSEHNIKKSKMLFKDIEEQYPASLICVESINALELRNQKKLSKPHMLVSESINTVSSYVQSSPFVSNSENNQTPPQMLFSKQNFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPNLIMQSNTFDVPANQMSLLNTTSEERKDVDLNVSSVGQVETSKKFEGAVQVKQKFTCLSENNCNKSASGYLTCENEVEFRGFYSARGKKLNVSSEALQKAVKLFGDIENISEETSTEVDPRSFSSSKCNDSIVSAFKIESHNNTNLNEKNNKCQLVLQNIEMTTDAFVDKSTENCKRNIIENDNKCVAANRKTCNLGESDSSDSGKNDTIYIHKDANDLPCTDQHNVYFKLPSQFVKEGNTQMKASLSDLTCLEIVKEEETCYVDTSNKEQLNASHMDQNRKDFEVFDISFQTASGKNIKVSKESLNKVVNFFDPKTEEELNNFFLNSKLLSGISKNKVDILSHEEIDMFKNEILKESISIDTQNQLSTLQQQPECENKKIKQATLLSFHTASGKKVKVAKESLEKVRNLFDEEKQAISKISLNSQRAKIQKDRGERTCKEGLVLACKTVEITTVPKCEEMNSLGDNVENHVSNPTAVLPKPLSDHFYRQSENISTPNVSLKVKVCENVEKETAKSPATCYTNQSPYSAVENSALAFYTGHGRKISVSQASLFKAKKWLREELGDQPEEINSDKNYVGNPSHGSGSNSIITENGKNHLPEKQDSAYLSFSSMSNYSYHSDFYCSHDSGYLSKNTTDSSIEPVVKNIEDERNINFSEVTSTVREANAYPQTVHKDTCIQKLVTNSSLCTNENTAFKLSVSNSDNFEVETPAFSTASGKIVHVSRETIKKVKEIFTDNCSKVIQMDTKSKSSTCQTRIVSDYYKTLDDSEDSLPNSTDEESSMHSHKIFADIQNVHILRDQSMLGLDKVSTLSPCDVSLKTSSLCNTGKFPELVSSTNPEIFSTASGKSIQVSESSLQQARQVFSEIEEHAKQHFSKVSFKNNEEYSDQFTREEKVIHVPQKLISQKGFSCNVVNSPAFSGFSTASGKQVSVSESALHKVKGMLEEFDLIKTDCTLQHPPTSRPGISKFPSLPCVDKRTAEYSMNSEMKKAYSTEFKLLNNFNIESNTSENNHSIKVPPYMSQFKQDKQQLVLGTKVSLVENIHILGKEQALPKNIKMGIGKTETFPDVPMKTNIEVSSTYYKDSENYFETEAVEIAKAFMEDGELTDSEPLSHAEHTRFTCQENEETVWLNSRIGKRRGDNHVSFGEPSIKRNLLNEFDRILENQEKSLKVSKSTPDGTMKDRRLFMQHVYLEPITCGPFCTTKKRQGIQNPNFTAPGQEFLSKSHFYEHLTSENSSSNLSVLGQPFYKVPATRSKEMRHSISTGKSTKIFVPPFKTKSHFHRDKQCASNTVVEENKQKQNTDEHDSGDSENNNSEIHQLNKNNSNQACEEEPLDLITSLQNARDTQDMRIKKKQRHHISPQPGSLYLAKTSSLPRISLKAAVGGRVPSACSHKQLYMYGVSKHCIKINSKNAESFQFHIQDYFGKEYLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDLEIDRSRRSALKKIMEKDDTAAKTLVLCVSDIISLSANICETSNSKTNSEDTKKVSVIELTDGWYAVKALLDPPLLALLKNGRLSVGQKIIIHGAELLGSPEACTPLEAPQSLMLKISANSTRPARWYTKLGFFPDPRPFPLRLSSLFSDGGNVGCADIIIQRTYPIQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQKRLEALFTKIQAEFEEREDNNNNNFLPFSNVATWTVPVRRYRDVCFLFQYVKWSQCYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQGLSRDVTTVWKLRIISCAKEETDSVTLSIWCPSTELYSLLTEGKRYRIYHLAASKSKIKSEKANIQLAATKKTQYQELPASDEILFQVYQPREPLHFNRLLDPDFQPPCCEVDLIGVVVSVVKKTVLGLAPLVYLSDECHNLLAIKFWIDLNEDIIKLHALIAASNLLWRPESKSGIPTLFAGDFSMFSASPKESHFQETFNKMRNTIENIDIFCKDAENKLIHMLNASDPKWCTPTKDSTSELHTAQTVLGTGNKFLISSPNSEINYQSPSSLCTPKVKLVSTPISAQMTSKSCCKGEKAIDDPKSCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSIVTKYETPIKKKELNSPQMPSPKKFIEISPLESNLIADEELALINTQALLSSSAGEDQCVSISEPPGTTTTNSKDYLRLKRHCTTSLNKEPKNPQVSTEDCATNMQDTSIIKDIS</mol_seq> | |
679 </sequence> | |
680 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">otolemur_garnettii</property> | |
681 </clade> | |
682 </clade> | |
683 <clade branch_length="0.004716"> | |
684 <confidence type="bootstrap">62</confidence> | |
685 <taxonomy> | |
686 <scientific_name>Haplorrhini</scientific_name> | |
687 <id>376913</id> | |
688 <common_name>Dry-nosed primates</common_name> | |
689 </taxonomy> | |
690 <clade branch_length="0.032521"> | |
691 <confidence type="bootstrap">98</confidence> | |
692 <taxonomy> | |
693 <scientific_name>Simiiformes</scientific_name> | |
694 <id>314293</id> | |
695 <common_name>Simians</common_name> | |
696 </taxonomy> | |
697 <clade branch_length="0.035993"> | |
698 <name>ENSCJAG00000018462</name> | |
470 <taxonomy> | 699 <taxonomy> |
471 <id>9615</id> | 700 <id>9483</id> |
472 <scientific_name>Canis lupus familiaris</scientific_name> | 701 <scientific_name>Callithrix jacchus</scientific_name> |
702 <common_name>Marmoset</common_name> | |
473 </taxonomy> | 703 </taxonomy> |
474 <sequence> | 704 <sequence> |
475 <accession source="Ensembl">ENSCAFP00000009557</accession> | 705 <accession source="Ensembl">ENSCJAP00000034250</accession> |
476 <name>BRCA2-201</name> | 706 <name>BRCA2-201</name> |
477 <location>25:7734450-7797815</location> | 707 <location>5:145430371-145527428</location> |
478 <mol_seq is_aligned="0">MPVGCKERPTFFEIFKTRCNQADLGPISLNWFEELSLEAPPYNSEPTEESGYKISYEPNLFKTPQRKPYNQLASTPIVFREPIYQQSPLKELDKYRLVSGKDITDSKHKSCCTMKSKMDRANDVTSPPLNSYLSESPVLRCTHVTPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLIVRDEEVSAAVFPNDTTAIFKSCFSNHDESLKKNDRFIPCGPGKENKNQREAKSQSLGNSFGKVNSTKDHFVKSTPNVLEDEVHEKVLDVSEEEDSFSLCVPKYKTRNLQKIKTSKTRKNIFNETKTSECEEAKKQMKENKHSLVSEMEPNDSHPLDWNVTHEKPFGNGTDKISKEIVLSSASGCSDLTLSSLNGAQMEKTPLLHTSYDQNNSEKDLIITDKECTNFITLENSWPQISNVPKYSEKTLNEEIVVNKINEGQCLESHEDSVVSVKQAIYETTLIASPLQGIRKSIFRIRESPEGMSNAMFSNNMTNPNFKEPEASESGLEKHTICSQKEDSLCTSSIDDGSWPATIKHTSVALKNLGLISSLKKKTKKFIYVINDETSNQGLKTQKDQESRLINLSTQFEANAFEGPLTFTNADSGLLHSSSIKKNCLQNDSEKPALSLTSSFGTILRKVSSNGASSPNNKIISQDPDYKEAKINKKKLESFITTETDCLSSLQEKHWEDDAKKPRVSDIKEKVLPTASHPPVPHSEVEGNDIHFQSPESFSFDCDNTSLLTPSSRDSPSSLVVMSRGKESYKISEKLKCKNHETGFELTKNIPMEKNQDIHVLNADSKNAKLLSTEKHITVASSSVKVQFNQNANLTTIQKDQKETTLISKITVNPNSEELFPDDENNFVLKITNESNTPVLGNTKELHDSNLCCVRDSVPKNSTMVVCTDLDDKQTAKVSIMKDCYSSSIDDLTERNRSTIKQQLKMTLDQDSKSDITSDIVRKSNGNSDYMDNWARLSDPISNHSFENGFKTASNKEIKLSENNIRKSKMLFKDIEEHYPTNLACLEIVNTSSLESQKKPSKSHALDPQSINIISGFVQNSTYVSDSESGHTAPPTLSLKQDFDSNRNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIIQKNPFEMPENQLTILNSTSKEWKDDDLHLTTNAPSISQVDSKKSEGIIGGKQKFACLSRTSCNRSASGYSTDKNEVEFRGFYSARGTKLNVGSEALQKAKKLFSDLENINEETSVEVDRSFSSSKYNDSVSMIQIEDCNDKNLNEKNNKCRLILQNNIEMTTDIFVEEYTESYRRNTENEGNQCTDAGRNTCNSESDGSDSSKNDTVYIHEEENGLPCIDQHNIDLKLFSQFMKEGNTQIKEGLSDLTCLEVMKAEETSHVTMSNKQQLTANTGQNIKDFDTFYLSFQTASRKNIRVSKESLNKARSLLNQKWTEEELNNFSDSLNSELLPGIDIKKTDISNHEVIENTERKDKITKESDLIGTENILLILQQRPESKIKKIKESAVLGFHTASGKKIEITKESLDKVKNLFEEKEQDNSEITNFSHRGAKMSKDREECKDGRELACGTTEITTTPEYEETHSSLEKKKLVSNEIAALRPRLLSDNLYKQTENLKISDHASQKVDVHENTEKETAKKPTMYTNQSTYSAIENSPLTFYTGHGRKISVSEASLFEAKKWLREGEWDDQSERINAAKVNCLKEYPDDYVENPSCGNSSNSAITENDKNHLSEKQGSTYLSNSTMSNSYSYHPGFCHSSEVYNKSEYLSRSKIDNSGIEPVIKNIRERKNIGFSEIMSPGREADTDPQSVNEDICVEKLATNSSCKNKNTAIKVAISDSNNFNTIQKLNSDSNNSVPAYSTVNSKRVFVAHQTKVTEGFTDNCSMVTKQNTKSKSDTCHAEIVADYPKALDDSEAIFPNSLGAIECSPSHKVFADIQSEQTSQLNQSMSGLEKVSETPPCQINSKTSDRCELPRGKLPKSVSYTNACGIFSTASGKSVQVSDAAIQKAREVFSKLEDSAKQLFPEVSLKDNEEHSEKFTNEENTVIYTSQNLLSSAFSGFRTASGKQVPVSESALCKVKGMLEEFNLIRTESCLQHSSTSRQDVSKMPPPSCIGKRTPEHSRNSKLDKACNKEFRLSSNCNNQSGSSENHHSIKVSPCPSQLKRDKPQLLVGSKGSLVENIHPLGKEQALPKNIKTEIGKAETFPNLPVKTNIEFCSTYSKDPENYFETETVEIAKAFMEDGELTDSELLSHAKHFVFTCQNTKEMVLLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIKNQETSLKASKSTPDGILKDRSLFMHHISLEPISCGPFRTTEERQEIQNPNFTAPGQEFLPKSHFYEHLASEKSSSNLSVSRQPFCMVPATGNEKRRHLIAPGKPVKVFVPPFKTKSHFHRDEQCISKNTKLEKNKQNSKDIDELGSGDSEKNINDSGIHQLKKNNSNQAATIIFTKNEKEPLDLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTLPRISLREAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHAQDYFGKEGLWSGEGIQLADGGWLIPSNDGKIGKEEFYRALCDTPGVDPNCISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDKSRRSAIKKIMERDDTAAKTLVLCISEIISSSADISETSSSKTSSVGTKKVGIIELTDGWYAIKAQLDPPLLALVKNGRLTVGQKITIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEIQQKKLEVLFNKIQAEFEKNDENITKQCIPSCALTRQQICALQDGAELYEAVTNAPDPSDLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFKKAMESAEQGEQILPRDVTTVWKLRIISYRKKEKDSVTLSIWRPSPDLYSLLIEGKRYRIYHLAASQSKSKSGKANTQLTATKKTQYQQLPASDEILSQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPVVYLSDECHNLLAIKFWTDFNEDIIKPYTLIAASNLQWRPEAKSGIPTLFAGDFSRFSASPKEEHFQETFHKMKNTVENIGMFYNDAENKLVHILNANDPKLSTPTKDYASEPHTAQIVLGIGNKFLMSSPNNEMNYQSPLSLCKPKEKSVPIPGSTQMTSKSYCKEEKEMDDPKTCKKRRALDFLSRVPLPPSVSPICTFVSPAAQKAFQPPRSCGTKYETLMKKELNSPQMTPRKFNDLSLLESDSIADEELAMINTQALLLGSPGEHQLVSVSDSTRTAPTSSKDYLGLKRHSTAPGVRGPESPQACTRKREPRVQNTSDLKRTSLRLQRQQTQK</mol_seq> | 708 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKAVDIGPISLNWFEELSSEASPCNSEPTEESEHKISVYEPNIFKTPQRKPSYNQLASTPIIFKEQGLTLPPYQSPVKELDKFRLDLGRKVPNGRHKSPRTVKAKMDQTDDVTCPLLNSCLSESPVLQCTHVTPQRDKSVVCGSLFHTPKFVKGHQTPKHISESLGAEVDPDMSWSSSLATPPSLSSTVLIVRNEEASETVFPHDTTAIVKCCFSNHDESLKKNSRFIPSVTDSENTNQREATCHGFGKTLGNSFGKVNSCKDYIGKSMPNVLEDEVYETIVDTSEEDSFSLCFSKCRKRNLQKVRTEKTRKKIYEANTDECEKSKSQVKEKYSFVSELEPNDTDPLDSNVANQKLFESASDKISKEVVPSLAYERSQLTLSGLHGTQMEIIPLLHISSCDQSNSEKNLLDAENERKKDFLTSENSLSDISSLPKSEKPLNEERMVNKKDEEQHLESDGDHILAVKQATSGNPLVASSFQGIKKSIFRIRESPKETLSASFSGSMSDPNVKKETEASESRLEIHTVCSWKEDTLCPDSIDNGSWPASITQTSVVLKNAGLISTLKKKTNKFIYAIHDETSYQGKKIQKDQKSEVINSSSQFEANAFEAPLTFANTDSGLLHPSVQRNCSQIDSGEPTLSLTSSSGTILRKCTRNETCCNNIIISQDLDYKEAKCNKEKTQLFITPEADSLSCLQEGQCKNYPKSKEVSDIKEEVLATACHLAQHSEVEYCDTDFQSQKTILHDHENASSLILTPAFKDVLSGKESYRISDELKCNNCEADFELIKNISMENNQDVHALNENSKNIELLPPEKYIIVASPSRYVQFNQNTNLRVIQKDQEETTLISKMTVSPDSEELLSDNENNFVFQVASERNNFALESTEELHEADLTCVNKPNFENSTMVLHADIVDKQATQVSIKKDLDSSNKVYYLAEEKKNSVKQHLEMTLGQDIKSDISLNIDKIPNKNNDYKDKWAGLLHPISNHSFGGSFRTASNKEIKLSEHNIKKSKMLFRDIEEQYPTSSACVEIVNTLALDNQKKLSKPQSIKTVSAHVQSSVVGFDCKNSLTTPQMLFSKEDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQYRKPSYILQNNMFEVPENQMTILNSTSEEYRDADLHLVMNAPSIGQVDSRKQFEGTVGIKQKFAVLLKNDCNKSASGYLTDADEVELRGFYSAHGVKLNVSTEALQKAVKLFSDIESISEETSAAVDPISLSSSKCHDSVVSVFKIENHDEKNNECQLILQNNIEMTTGTFVEEITENYKKNIENEDKHTATSRNTHNLEFDGSDSSKNDTVHIHKDENDLPLTNQHNIYLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQETCHGNTSNKEQLTATKMEQNIKDVGTFDLSFQTASGKNISISKESFNKVVNFFDQKPEELHNFSLNSKLHSDIRKNKMDILSYEETDIVKNKTLKESIPVGTGNQLVTIQEQPKSNIKKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKGQDTGEITSFSHQGAKTLKYREAYKDLELVRETVEIATTRKHEEMQNSLSNDKNLVSIETVVPPKPLSDNLYRHTESLKTSEGNFLKVKEHENVEKETAESPATCYRNQSPYSVIENSALAFYTYCSRKTSVSQASSLEAKQWLREGEFDDQPENINTVDFVGNSLYENNSNNTITEGNKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYRSKNNLDSGIEPVVKNVEDQKNTRSSKVTFNVKDANAYPQTVNEDTCVEELVTSSSSCKNKNAAIRLSTSNCNNSEVGPHAFSTASGKIVCVSHETIKKVKEKFTDSCSKVIKENTENKSNNCQTKILAGCYKALNESEDIFHNSSGNDECSMHSHKVFADIQSEEILQHNQKMFGVEKVSEIPPCDVSLETSGIYKFSMGKLPKSVLSTNTCGIFSTASGKSVQVSNASLQKARQVFSEIDDSTKQLSSEVLFTNNEHSDQLTREENTATQIAEHLIPSQKGFSYNVNSSAFSGFNTASGKQVSISESALHKVKGMLEEFDLIRTEHSLHHSPISRQNVSKILPCVVKRNPEHCVNSEMEKTCSKEFKLSNNFNIEGGSSEHNQSIKVSPYLSQLKQDKQQLVLGTKVSLVENIDVLGKEQASLENIKMEIGKTETFSDVSVKTNTEVCSTYSKDSENCFETEAVEIAKAFMEDDELIDSELPSHASHTLITCPKNDEMVLSNSRIGKRRGEAIISVGEPPIKRSLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFTHHVSLEPITCVPFCTTKERQKIQNLNFTAPGQESLSKSHLYEHLTLEKSSSSLAVSGQPFYQVPATRHEKMRRLIATGKPTKVFVPPFKTKSHLHRDEQCVRNINLEENKPKQNIDGHGSGGGKNKINDSEIHQLNKNNSNQAATVIFTKREEEPLDLITSLQNARDIQDMRIKKKQRQCIFPQPGSLYLTKTSTLPRISLKAAVGSQFPSACSHKQLYMYGVSKHYVKINSKNAESFQFHTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDKSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQNVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKHAEAQQKRLEALFTKIQEEFEEHEENKTKPYLPSRALTRQQVHALQDGAELYEAVKNAADPAYIEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRNVTTVWKLRIVSYSKKAKDSVILSIWRPSSDLYSLLTEGMRYRIYHLATSKSKSKSERANIQLVATKKTQYQQLPASDEILFQVYQPRESLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKQGHFQETFNNLKNTVENIDIFCNEAENKLMHILQANDPKWSTPTKDYNSEPHTAQIILPAGNKLLMSSPNCDINYQSPLSLRMPKSKSVSTPVPAQMTSKSCKGEKEIDDQKSCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQVTPFKKFNEISLLESNSIADEELALINTQALLSGSIGEKQFISVSEFTRTAPTSSKDCLRLKRCSTTSLIKEQESSRAGTEECENDMQDTSTTEK</mol_seq> |
479 </sequence> | 709 </sequence> |
480 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">canis_familiaris</property> | 710 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">callithrix_jacchus</property> |
481 </clade> | 711 </clade> |
482 <clade branch_length="0.008616"> | 712 <clade branch_length="0.008543"> |
483 <confidence type="bootstrap">100</confidence> | 713 <confidence type="bootstrap">75</confidence> |
484 <taxonomy> | 714 <taxonomy> |
485 <id>379584</id> | 715 <scientific_name>Catarrhini</scientific_name> |
486 <scientific_name>Caniformia</scientific_name> | 716 <id>9526</id> |
717 <common_name>Apes and Old World monkeys</common_name> | |
487 </taxonomy> | 718 </taxonomy> |
488 <clade branch_length="0.028288"> | 719 <clade branch_length="0.011541"> |
489 <name>ENSAMEG00000009390</name> | 720 <confidence type="bootstrap">98</confidence> |
490 <taxonomy> | 721 <taxonomy> |
491 <id>9646</id> | 722 <scientific_name>Cercopithecinae</scientific_name> |
492 <scientific_name>Ailuropoda melanoleuca</scientific_name> | 723 <id>9528</id> |
724 <common_name>Old World monkeys</common_name> | |
493 </taxonomy> | 725 </taxonomy> |
494 <sequence> | 726 <clade branch_length="0.000688"> |
495 <accession source="Ensembl">ENSAMEP00000009909</accession> | 727 <confidence type="bootstrap">98</confidence> |
496 <name>BRCA2-201</name> | |
497 <location>GL192584.1:1852747-1917315</location> | |
498 <mol_seq is_aligned="0">MPIGCKERPTFFEIFKTRCNEADLGPISLNWFEELSLEAPPSNSEPTEESGYKINYEPNLFKTPQRKPYHQLASTPIIFRDQGLIVPTYQQSPLKELDKYRLDSGKDITNSKHKSCCTMKSKMDQTNDVTSPPLNSCLSESPVLRCAHITPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVVRDEEASAAVFPNDTTAIFKSCFSNHDESRKKNDRFIPSGPDKENKNQREAKSQGLGKMLGNAFGKVNSCRDHFGKSTPSVLEDEVHETVADVSEEDSFSLCVPKYKTNLPKIKTSKTRKNIFNETKTSEYGEAKKQMKENKHSFLSEMEPNDSDPLDWNVTNQKPFGNGSNKISKKVVPSSASEWSHLTLSGLSGTQMEKTPLLHISSCDQNNSEKDFTITEKESTNFITLENSLPQISSVPEYSEMTLNEERVVNKIDEEQCLGTHEDSILSLKQAVTETTLIASPLQGIRKSIFRIRESLEETSSAVFSNNMTDPNSKEELEVPESGLEKHNICSQKEDSLGSVDNGSWSATIKHTSVALKNSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQESGLTNHSAQFEANAFEGQLTFTNADPGLLHSSPVKKNCLQNDSEEPTVSLTSSFGTVLRKVSNNGTSSPNGKTVPQDVDYKEAKTNNEKLQSFIITETDCLSSLQEKHCEDDAKSQRVSNIKQKVLPAVSHPPVPHSEVEGSGIHFHSPESSSSDHDNTSLLTPSSREPPSNPVVISRVKESHKMSEKLKCKNCEAGFELTKSIPMEKNQEIHVLNANSKNAKLLSSEEYVTVASPSMKVQFNQNANLTTIQKDQKETTLISKIAVNPNSEELFPDDENNFILEVTNESNIPVLGNIKELHDADLCCVREPVLKNSTMMMYTDMEDKQTAKVSIMKDFDSSNIDDLTEENRNGIKQQLKMTLDQDSKSDITLDIVRKSNGNNGYMNNWARLSDPISNHSFRNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTNLACIEIIDTSSLESQKKLSKPLALDPQSINSVPGFVKSSTYVSDSKSGHAAPPTLSLKRDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFKKPSHIIQKNPFEMPESQLTILNSTSEERRDTDLHLTINAPSITQVDSSKKFEGILGGKQKFACLSRTNCNRSASGYLADKNEVQFRGFYSARGIKLNVGSEALQKAKKLFSDLENISEETSVEVDTRIFYPSKCNDSAVSMIQIEDCNNDKNLNEKNNKSQLILQNNIEMTAGIFVEETTESYKRKTENEDNQCTDASRNTHNLESVGSDSSKNDTVYIHEEENSFPCIDQRSIDLKLSSQFMKEGNTQIKEGLSDLTCLEVAKAEETFHVNTSNKQQFTANTMGQSIKDLDIFDVSFHTASGKNIRVSKESLNKVINLLDQKWTEEELNNFSDSLNSELLSGTDINKTDISSHEKTENTERKDKIMKESDLTCTKNKLPTLQQRPESEIKKITAPTMLGFHTASGKKIEIAKESLDKVKNLFDEKEQDYSGITNFSHQEAKMSKDREECKDGLELACETIELTTAPKYEEMQNSLEEKKLVCNEIAVGPMLLSDNLYKQTENLKTDCSSLKVKVHEDTEKKTGRKPTIYTNQSTYSAIENSPLAFYTGHGRKISVSEASLFEAKKWLREGEVDDQPEKINAAKVICLKEYVDDYVENPSCGNSSSSTITENDKNHLSEKQGSTYLSNSTVSNRYSCHSDFSYSSEVYNKSEYLLKNKVDTPGFEPVMNNVRERENTSFSEIMSTVREVDTDPQSVNEDICVQRLVTSSSCKNENTAIKVAISDSNNFNSIPKLNLDSNNAVPAYGTASSKRIFVAHQTKVTERFTDNCSMVIKQKTKSKSDTYHVKIVAGYPNALGDSEDIVFPNSLDNAEHSLSSHKAFADIQSEQTLQLNQSISGLEKVSEIPSCQNNSKIPNICKFSTGNLPKSVPCTNACGIFSTASGKSVQVSDTALQKARQVFSKIEDSAIQLFPKVSFKNNEQSDKFTNEENTMLHTSQNLLSSAFSGFSTASGKQVPVSESALCKVKGMLEEFDLIRTDCGLQHSSTSRQDVSKIPPPSCIDKRALEHCGNSKLEKAYNKEFKLSSNCNTESASSENHFSIKLSPCPSPLKQDNQQLLLGSRVSLIENIDLLGKEQALAKNIKTEIGKTETFPNLPVKTNTEICSTYSKDPENYLETETVEIAKAFMEDGELTDSELLSHAKHSLFTRQNTKETALFSSRIGKRRGDALVSLGEPPIKRNLLNEFDRIIKSQEKSLKASKSTPDGTLKDRSLFMHHISLEPITCGPFRTTKERQEMQNPNFTAPGQEFLSQSHFCEHGALEKSSSNLSVSGQPFCTVPATRNEKRRHLNTPGKPVKVFVPPFKTKSHFHRGEQCISKNTNLEENKQNLKNIDEHGPGDSETNINDSGIHQLKKNNSNQAAATIIFTKGEKEPLDLITNLQNARDTQDMRIKKKQRQHIFPEPGSLYLAKTSTVPRISLRGAVEGQVPSACSHKKLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEGLWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDRSRRSAIRKIMERDDTAAKTLVLCVSEIISSSTDISETSSSKTSSVGAKKGGVVELTDGWYAVKSQLDPPLSALVKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKHDENTTKRYVPSCALTRQQVCALQDGAELYEAVTNAPDPNYLEDYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSRNVTTVWKLRIISYGKKEKDSVSLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKANIQLTATKKTQYQQLPASDEILFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPLVYLSDESHNLLAIKFWTDLNEDIIKPYTLIAASNLQWRPEAKSGIPTLFAGDSSRFSASPKEGHFQERFLKMKNTIENIGMFCNEAENKLMHILNANDPKLSTPTKDYASELHAAQTVLGMGNKFLMSSPSSEMNHQSPLSFCKLEETSVPTPGSAQMTSKSYCKGEKEMDDPKNCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRTCGTKHETPIKKKELNSPQMTPHKFNDLSLLESDSIADEELALINTQALLSGLAGENQLMSLSDSARTAPESSKDYVRPKRHCTASGLSGCRSPQARTEERETDGQDASTAKRASMRLQRRQKQK</mol_seq> | |
499 </sequence> | |
500 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ailuropoda_melanoleuca</property> | |
501 </clade> | |
502 <clade branch_length="0.031962"> | |
503 <name>ENSMPUG00000001945</name> | |
504 <taxonomy> | |
505 <id>9669</id> | |
506 <scientific_name>Mustela putorius furo</scientific_name> | |
507 </taxonomy> | |
508 <sequence> | |
509 <accession source="Ensembl">ENSMPUP00000001928</accession> | |
510 <name>BRCA2-201</name> | |
511 <location>GL897055.1:4516525-4575778</location> | |
512 <mol_seq is_aligned="0">MPIGCKERPTFFEIFKTRCNEADLGPISLNWFEELSLEAPSYNSEPTEESGYKISYEPNLFKTPQRKPYHQLASTPIIFQEQGLIVPMYQQSPLKELGRNRLDSGKDITNSKHKSFCTMKSKMDQTNDVTSPPLNSCLSESPFLRCTHVTPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASAAVFPNDTTAICKSCSPKHDDSLKKNDRCIPSGPDKENKNQREAKSQGLGKMLGNSFGKVNSCKDHFGKSTPNVLEDEVCETVADVSEEDSFSLCVPKYKTRNLPKIKTSKTRKNIFNETKTNECEETKKQMKENKHSFLSEMEPNDSDPLDWCVTKPKPFGNGNEKISKEFIPSSASEWSHLTLSGLSGTQMEKTPLLHSSSCDQSNSEKDFTITEKESTNFITLGNSSPQISSVPKYSEITLNKETVVNKIDEEQCLGSHEDSVLSGKRTISETTIIHSPLHGIRKSIFRIRESPEEMSSAMFSNHMTDLNSKGEIDTPESTLEKYTICSQKEDSLGSIDNGSWPATIRRTSGALKTSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQELGLTNHSDQSEANAFEAPLTFTNADSGLLHSSSVKKNCSQNDSEEPALSLISSFGTILRKVSNNGTSSVNNKTVPQDLDYKETKINKEKLQSFITTETDCLSSLQEKHCEDDAKSQRVSDTKEKVLTAVSYPPVPHSEVEGCGIHFQSPESFSSEHDNTSLTPSSRDPPSNPVMTCRGKESYKISEKLKCKNHEGGFELIKNIPMEKNQEMHVLNANSKNTEVLSTEKYVIVASPSMKVQFNQNTNLATIQKDQKETTLISKIAVNPNSEELFPNDENNFVLEITNESHIPVLGNIKELHDADLCCVREPVLKNSTMMVYTDMDDKQAAKLSIMKDFDSSNIDDLTEKNGNSIKQQLKMTLDQDSKSDITLDVVRKSNGNNDYMNNWARLSDPVSNHSFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTNLACIEIVNTSSLESQKKLSKPLTLDPQSINSVSVFVQSSAYVSDSESGHIAPPTSSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYIIEKNPFEMPENQLTILNRTSEECRNTDLHLTINAPSIIQVDSSKKFEGILGGNQRSACLSRTNCNRSACGSLADKNEVKFRGFYSARGTKLNVGSEALQKAKQLFRDLENIIEEPSVEVDTRSFSSGKCNDSAVSMIQIEDCNNDKNFNEKNNKNQLILQNNIEMTAGIFVEENTEGYKGNTENEDNQRTDASGNTHNLESVSSDSNKNDIVYIHEENSLPCIDQHNIDQKLSSQLMKEGNTQIKECLSDLTCLEVAKAEETFHVNTSNKQQFTANTMGQNIKDFDIFDLSFQTASGKNIRVSKESLNKVINLFDQKWTEEELNNFSDSLNSELLSGVDINKIDISSYEKTENSERKNKIMKESDLIGTENKLLTLQQRPESEIKKIKEPTMLGFHTASGKKIEIAKESLDKVKNLFDEKEQGDSGVTNFSHQGAKMSKDREKCEDGLELACETIELTAPKYEEMQNSIKEKKLVSSEIVVAPRLLSGNLYKQTENLKISDQDSLKVKVHENTEKETAKNHMIYTNQFTYSAIENSPLAFYTGHGRKISVSETSLFEAKKRLREGELDDKPEKINTATVICLKEYPDDCVENPSCGNSSSSTISENDKNPPSEKQGLTYLSNSTVSNRYSYHLDFCHSSEVYKKSEYLSKNKGDNSVIEPVVKNVRENTIFSEITSTVREADTDPQIINEDICAQKLVTNSLCKNENTAIKVAICDSNNFNSIQKLNSDSNNAIPAYSTASSKRVFVAHQTKATEGFTNNCSMIIKQNPKSKSDTCHMRIVAGYPNTLDDSEDIIFPDSLDDAEHQSSSQKVLADIQSEHTLQLNQSISGLEKVSEIPTCQNNSKTSDTCKLNTGKLPKSVSCTNACGIFSTASGKSVQVSDAALQKARQVFSKIEDSAKELFPKVFKNSEHSDKFTNEENAMLQTSQNLLSSTFSGFSTASGKQVPVSESALCKVKGMLEEFDLIRTECGLQHSSTSRQDVSKIPPPSCIDKRTPEQCGNSKLEKAYNKEFKLSSHCNIERESSENHHSIKVSPCQSQLKQDKQQLLLGSKVSLVENIHLLGKEQDLPKNIKTEIGKTETFPNLPVKRNIEICSTYSRDPENYLETETVEIAKAFMEDGELTDSELLSHAKHSLFTCQSTEEMVLLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIKNQEKSLKASKSTPDGILKDRSLFMHHISLEPITSGPLRTSKERHEMQNPNFTISGQEFLSKSRFYEHLALEKSSSNLSVSGQPFCTVPATRNEKRRHLNTPAKPVKVFVPPFKTKSHFHRDEQCISKNTNLEENKQNPEKIDEHGPGESETNINDGGIHQLKKNNSSQAATIIFTKCEKEPLDLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTVPRISLRGAVEGRVPSPCSHKQLYMYGVSEHCVKINSKNAESFQFHTEDYFGKEELWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDRSRRSALKKIMERDDTAAKTLVLCISEIISSSVDISETSSSKTNSMGTKKVGIIELTDGWYAVKAQLDPPLSALVKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKIAANSTRRARWYAKLGFSPDPRPFPLSLSSLFSDGGNVGCIDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKHDENITKQCRPSCALTRQQVCALQDGAELYEAVANAPDPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSRNVTTVWKLRIISYGKKEKDSVTLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKVNIQLTATKKTQYQQLQASDEILCQIYQPREPLNFNKLLSPDFQPPCSEVDLVGFVISVVKKIGPSLLHPKDFEPGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHTLIAASNLQWRPEAKSRIPTLFAGDFSRFSASPKEGHFQEIFHKMKNTIENIGMFCNDAENKLMHILDTNGPMLSTPTKDYASEPYTAQTVLGMGNKFLMSSPSGEMNYQSPLSLSKPKEKSVPTTGSAQMTSKSYHKGEKEMDDPKNCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRACGTKYETPIRKKEFNSPQMTPLKFNDLSLLESDSIADEELALINTQALLSGSAGENQLMSLSDSTKTAPENLKDYFRPKRHSLASGATGCWSPQAHTEERETNVQDASSMKRASVRLQRRQKQK</mol_seq> | |
513 </sequence> | |
514 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">mustela_putorius_furo</property> | |
515 </clade> | |
516 </clade> | |
517 </clade> | |
518 <clade branch_length="0.056037"> | |
519 <name>ENSFCAG00000025587</name> | |
520 <taxonomy> | |
521 <id>9685</id> | |
522 <scientific_name>Felis catus</scientific_name> | |
523 </taxonomy> | |
524 <sequence> | |
525 <accession source="Ensembl">ENSFCAP00000019777</accession> | |
526 <name>BRCA2-201</name> | |
527 <location>A1:11398212-11455078</location> | |
528 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELCLEAPPYNSEPTEESGYKISYEPNLFKTPQRKPCHQLASTPIIFKEQGLIPPIYQQSPLKELGKDITNSKHRSCCTMKSKMDQTNDVTSPPLNSCLSESPLLRSTHVTPQREKSVVCGSLFHTPKLTKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASAAVFPNDTTAIFKSYFCNHDESLKKNDRFIPSGPDSENKSQREAKSQGLGKMVGNSCDKVNSCKDPFGNSTLNVLEDGVRERVADVSEEDSFPLCVPKCKTRNLQKIKTSKTRKNIFNETTDECEEAKKQMKENKHSFVSEMEANASDPLDSNVTNQKPFGNGSDKISKEVVLSSASESCHLTLSGLNGTHMEKLPLLCISSCDQNNSEKDLITTEKECTNFIILEDSLPQISGVPKCTEKILNEEIVVNKIDEGQCLESHEDSILAVKQAVFETSLIASPLQGIRKSIFRIRESPEETFSAVFSNNITDPNFKEEHEASESVLEKHSICSQKEDSLSTSSLDNGSWPATIKHTSVALKNSGLISTLKKKTKFIYVVNDETSYQGLKTQKDQQSGLMNYSAQFEANVLEGPLTFANADSGLLHSSVKKTCLQNDSKEPILSLTNSFGTLLRKVSNNGSSSPNNKIISQDLDYKEAKIKKEKLQSFISTETNCLSSLQEKHCEDDTKSQRVADRKEEILPAVSQPSVPYSEVEDSGIHFQTLKSFSSDPDKSSQLTPHPRDPPSNPVGLSRGRESYEVSETLKCKNHEAGFELTKTMENNQEIHVLNEHAKKAKLLSTEKYVTEASPSMKVPFNQNAHLTIIQKDQKETTLISKITMNPNSEELFPDGDNFVFKITKERNVPVLGSIKELQDSDLCCVKEPVLENSTMVVYTDMDDKQAAKVSITKGFDSSNIDDLTEKDRNSIKQQLRMTLDQDSKSDITLDSDMKSNGNNDYMDNWARLSDPILNHNFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEERYPTNLACIEIVNTPLESQEKLSKPHILDPQSINTVSGCVQSSAYVSDSENRHTTPPTLSLKRDFDSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHLKQKNPCEMPEKHLTISNTTPEEQKDGHLRLTINALSISQGDSSKKFEGIIGGKQKLACLSKTSCNKSASGHLTGKNEVEFRGFYSARGTKLNVCSEALQKAKKLFSDLENISEETSVEVGIRSFSSSKCNGSVSMFKKENCNNEKKLNEKNNKYRLILQNNIEMTTGIFVAEDTEGYKRNIENKANKYTDASRNVYNFREADGSDSSKNDTVYIHKEENGLPYIDQHDIDLKLSSQFIKEGNTQIKEGLSDLTCLEVVKAEETLHVNTSNKEHLTANTMGRITKDFDIFDVSFQTASGKNIRVSRASLNKVTNLLDQKCTEEELNNFADSLNSELLSGIDINKADISHHEKMENTERKDKMKESDLTGTENKSLTLQQRPEYEIKKIKEPTILGFHTASGKRIEIAKESLDKVKNLFDEQEQDKSEMTNFSHRGTKMSKGREECEGGLRLACKTIEITPASKEEEMQKPLEKNLVSNEIVVVPRLLSDNLYKQTENLKIPNRASLKVKVHENTGKETAKKPTTCTNQSTYSATENSALSFYTGHGRKISVSQSSILEVKKWLRGGELDDQPEKTVYNISEYLPKSKVDNSGIEPVVRNVGERENTSVSEIMFTVREADTDPQSVNEDICVQRLVTNFSCKKENTAIKVTVSDSNNFDSTQKLNSDSNDAVPVYTTASSERVLVAHETKVTEGFTENCSMAIKQTTKSKPGKIVAGYRKAPDDSEDTICPNSLDGAECSSPSHKDFAETQSEQTLQLNQSISGFKKRSEIPPHQINLKTSDICKLSTGKCLQSISYTNACGIFSTASGKCVQVSDAALQKARQVFSKVEDSAKQPFSKVSFKHNEDHSDKFTREENTMIHTPQNLLSSAFSGFSTASGKQVPVSESALCKVKGILEEFDVMRTECGPQRSPTSRQDVSKMPPPSCVDNRTPEHSVNSKLEKAYNKEFKLSSNSKIENGSSENHSVQVSPYPSQFKQDKQLIQGNKASLVENIHLLEKEQALPKNIKMEIGKTEAFPNLPLKTDTAIHSTDSKDPENYFETETVEIAKAFMEDGELTDADLLSHARHFLPTCQHSEETLVSNSRRGKRRGVLVSVGEPPIKRNLLNEFDRIIKNQEKSLKASKSTPDGIIKDRSLFMHHISLEPVTCGPFSTTKKRQEIQNPNFTAPGQKFLSKSHFYEHLALEKSSSNVSISGQPFCTVPATRSEKRGHSITPSKPVKVFVPPFKTKSHFLQDEQHISKNTHVEENKQKPNNIDERSSGDSKNNINNSEIHQLNKNNSSQAATMVFTKCEKEPLDLIASLQNARDIQDMRIREKRKQRIFPQPGSLYLAKTSTVPRISLRVAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEVQWAKEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYYDMEIDRSKRSAIKKIMERDDTAAKTLVLCISETISSSTDLSETSGSKTSGVGTKNVGIVELTDGWYAIKAQLDPPLLALVKKGRLTVGHKIIIHGAELAGSPDACTPLEAPESLILKISANSTRPACWYAKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVVIQRTYPIQWMEKTPSGLCIFRNEREEEREATKYAEAQQKKLEVLFNKIQAEFEKHDGKMGFCALQDGAELYEAVKNAPDPASLEAYFSEEQIRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQMLPRDVTTVWKMRIISYGKKEKDSVTLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSERAHIQLTATKKTQYQQLPASDELLFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGFAPLVYLSDECHNLLAIKVWTDLNEDIVKPHTLIAASNLQWRPESKSGIPTLFAGDFSRFSASPKEGHFQETFHKMKNTIENVDTFCNDAENKLVHILNANSPKVSTPTKDYASEPHTIQTVLGLGNKLSMSSPNSEMNYQSPLSLCKPKAKSVPTPGSAQMTSKSCYKGERELDDPKTCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKRELNSPQMTPLKFNDTSLVESDSIADEELALINTQALLSGLAGEDQLMSLNDSPRTAPTSSKDYVRPKSYPTAPGIRDCENPQASTEGGEPDVQDTDTVKRSSMRLQRRQQQT</mol_seq> | |
529 </sequence> | |
530 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">felis_catus</property> | |
531 </clade> | |
532 </clade> | |
533 <clade branch_length="0.000353"> | |
534 <confidence type="bootstrap">7</confidence> | |
535 <taxonomy> | |
536 <id>314145</id> | |
537 <scientific_name>Laurasiatheria</scientific_name> | |
538 </taxonomy> | |
539 <clade branch_length="0.048224"> | |
540 <name>ENSECAG00000014890</name> | |
541 <taxonomy> | |
542 <id>9796</id> | |
543 <scientific_name>Equus caballus</scientific_name> | |
544 </taxonomy> | |
545 <sequence> | |
546 <accession source="Ensembl">ENSECAP00000013146</accession> | |
547 <name>BRCA2-201</name> | |
548 <location>17:11512132-11574407</location> | |
549 <mol_seq is_aligned="0">MPIGCKERPSFFDIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEYKINSYEPNLFKTPQRKPYHHLASTPIIFKEQSLTLPLYQSPLKESDKYRLDLGKNIVFSKSKSCCTMKAKMDQANDVTSPPLNSCLSESPVVLRCTHVTPQREKLVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIARDEEASATVFPNDTTSILKSYFSNHDGSLNKNDRVNPSGPDKENKNQREAKSHELREMLRNSFGKVNSCKDHFGESTPNVLQDKVHETVADISEEDSFSLCVSKYKTRNLQKRKIGKSRKNIFNETETDEFEEVEKQMKENKHSFVFEMEPNDSDPLDASVTNQKPFGNVSHKISKEVVPSSASGWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDIIGTEKECTNLITLENSVPRISCVPKTEKKLNEETVINKRDEGQCLESHEDSILVVKQAISETSLIASSLQDIKKSIFRVREIPEETFSAVFSNNMTDPNFKEKPEASESGLEINTLYSQKEDSLCTSSVDHGSWPATIKHTSIALKNAGLISTLKKKPKKFIYAISDEISYQGLKIQKDQESGPTNCSTQLEANTFETPVTFINSDSGLLHSSVKKNCLQNDSEEPTLSLTSFSGTVLRRCSNNESSSSNNKIISQDLDCKEAKINKEKLQSFITTETDCLSCLQEKHCEDDSKGQRVSDTKEKVLPAVCHPGMPHSEVECSDTCFQFQESFLYDHDNTSILTPSSKDPPSNLVVISGIKESYKMSEKLKFKNCETDFEFTKSIPMEKNQEIGVLNENSEKAELLSPEKYITVASSSMKAQVSQNTNLTIIKKKQEETTLISKITVNPNSEELFPDNENNFVFQIANERNIPALENTKELHEADLSCVEEPIIKNSTMVVCTNIDDKQAAEVSITKDLDSLDTVRDLTETNRNSVKQQLEMTVGQDSKSDISLDIDMKSNRNDDCMDKWTGLSDPISNHSFGHGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTSLACVEIVNTLSLENQEKLSKPHSINIVPRYKHSSAFVSDSENSHTTPPILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPRHIIQNNPFEMPENQVTVLNTTSEEWKDVDHPTVNTPSVSQVDSSKKYESIVRGKQKFACLLKTNCNKNASGYLADKNDLEFRGFYSARGTKLNVSSGALQKAMKLFSDVETISEEPSAEVDPRSISLSKCNDSVVSMFKIENYNDKDLNEKNNKCQPILKNSIEVTTGIFVENTEDYKRNAENEDNKCTETSRNICNLGEFDGDESSKNDTVYIHEDESGLPCIDQHNIYLKLPGQFMKEERTQIKEGLSDLTCLEVVKAEETFHVNTSNKEQLTANKMGQNIKDFDIFDLSFQTASGKNIRVSKESLNKVVNFFDQKYTEKELYNFSDSLNSELLSGININKIDVSSCEETDMVKDKILKERNPVDTENQLLTLQQGSECEIEKIKELAMLGFHTASGKKVKIAKESLDKVRNLFDEQNQNSNSEITNFSHRGAKPLKDREECKGLELGCETVEITAPKYEEMQNSLEEEKLVSSEIALSPRLLSDDLYKQTENLKTSNNISLKVKVHENLGKETAKSPTTCYTNQSTCLDVENSALTFYTGCGRKISVSQTSLFEAKKWLREGELDDESEKIRYLQDYVGNPSCRNHSNGIITGNYKNHLSEKEDSTYLSNSSMSNSCLYHSDFCHSNEVYNKSESLSKSKTDNSGIEPVVKNVKDRKNTSFSEVISTIREANSYPQTVNEDICVQKLVPNSSPCKNKNTAIKVTTSDSNNFETGVPAFSTASGKIVFASHETKVRGRFTDNGSKIIKQNTESKSGTCQTKIVASSHKALDDSEVVIFSNSPDTEEHSMCSNKVFAEIQSEQILQHNQNISGLEKVSEISPCQINLKTSNICKFDMGKLPKSIASVNACGIFSTASGKSVQVSDAALQKARQVFSKIEDGDNQLFSKVSLKNNKEHSDKFTREENTMIHSPQNLLSSAFSGFSTASGKQVPVSESALCKVKGMLEEFDIIRTECSHQHSPTCEQDKLKILPLSCIDKRTPEHSVNSKTEKAYSKEFKLSSKYIIESGSSENSCSVKVSPYLPQFKQDKQQLGLGAKVSLVENIHLLGKEQALPKNVKMEIGETNLPVKTNTEVCSTYSKDPENCFETEAVEIAKAFMEDGELTDSELLSNTKHSLFTCQNNEEMISLNSRTGKRRGDALVSVGEPPIKRDLLNEFDRIMENQEKSLTASKSTPDGTIKDRRLFMHHISLEPVTCGPFCTTKERQEIQKPNFTAPGQEFLYNSHFYEHLTLEKSSSNLSVSGQPFYKAPATRNEKRRHSLTTGKPRKIFVPPFKTKSHFHRDECCVSRNTQLEENKLNQKNIDEHGSGDRENNINDGETCQLNKSSSNQAATMIFTKWEEEPLDLITNLQNARDTQDMRIKKKQKQHIFPQPGSLYLAKTSSVPRISLKAAVGGHVPSAYSHKQLYMFGVSKHCVKINSKNAGSFQFLTQDYFGKEALLAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIVWKLAAMEFAFPKEFANRCLTPERVLLQLNQLYDIEIDRSRRSAIKKIMERDDTAAKRLVLCVSEIISSSTDISETSSSKTRSVDTKKADIIELTDGWYAIKAHLDPPLLALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFFPDPRPFPLPLSSLFSDGGSVGCVDVIIQRAYPIQWVEKTSAGSYIFRNEREEEKEAIKYAEAQQKKLEALFTKIQVEFEEHEESIAKQCTPSRALTRQQVRALQDGAELYEAVKSAPDPSYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAVESSGQGEQILSRDVTTVWKLRIISYEKKQKDSVLLSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSRSERANIHLTATKKTRYQQLPASDEILFQVYQPREPLHFNKLLNPDFQPPCSEVDVIGFVVSVVKKIGLSPLVYLSDECHNFLAIKFWIDLNEDFIKPHMLIVASNLQWRPESNSGIPTLFAGDFSTFSASPKEGHFQETFHKMKNTMENIDIFCNDAENKLMHVLNANDAKWSTPTKDYTSEPHTAQTVLGMGNKFLMSSPNSEMNYQSPLSLCKPKGKSVSTPLSAPMTLKSCKEEMEIDDPKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKGLNSPEMTPLKKVNDISLLEGDSIADEELALINTQALLSGSAGENQLMSISESTRTTPTCSQDCLGLKRHCSTSVVKEQEKSQVSTKERETNTQDTRTVK</mol_seq> | |
550 </sequence> | |
551 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">equus_caballus</property> | |
552 </clade> | |
553 <clade branch_length="0.015307"> | |
554 <confidence type="bootstrap">9</confidence> | |
555 <taxonomy> | |
556 <id>91561</id> | |
557 <scientific_name>Cetartiodactyla</scientific_name> | |
558 </taxonomy> | |
559 <clade branch_length="0.052959"> | |
560 <name>ENSVPAG00000000886</name> | |
561 <taxonomy> | |
562 <id>30538</id> | |
563 <scientific_name>Vicugna pacos</scientific_name> | |
564 </taxonomy> | |
565 <sequence> | |
566 <accession source="Ensembl">ENSVPAP00000000821</accession> | |
567 <name>BRCA2-201</name> | |
568 <location>GeneScaffold_1422:28074-80684</location> | |
569 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELSSEAPPYNSEPSEESEYKISSYEPNLFKTPQRKPYHHLASTPIIFKEQGPTLPLYQSPLKEQGKFRLDLGKDVTNSKHKSFCTMKAKVDQANDVTSPPPNSCLSESPVLQYTHETPQREKSVICTLFHTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEEASAATFPSDTTAILKGCFSNHDQSLKKNDRFIPSGPDNENQRKAKSHELEKILEESFGNGNSCKDHFEKSMPNVLEDEVHETAADISEEDSFPVCVSKYKRRNIRKVKTGKTRKNIFNKTKTNEYEEAEKQMTENKHSFVSEMGPNDSDPLDSNVTNQKLFGNGADKISQEVIPSSASEWSQLTLSGLNGTQMEKTSLLHISSCDQNNSEEDCIGTEKEFINFITSENYLPHISSLSKTVKILNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFKEEEASKSGLEIQTICSHKEDSLCTSSVDNGSWPATTKNTSVALKNAGLISTLKKKTKRFIYAINDKTSYQGLKMQRDQESELTHSSAQLEADHFETPLTFTNIDSGLLHSSIQKHCLQNDSEDPPLSLTSSFGTILRKCNNKIVSQDLDYKEAKFSKEKLESFPTETDYMSCQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEDCSDTHFQSQELLHDNDNTTVLTTVFNDLSNPVVISRGKESYKMSEKIKPKNSEAGSELTKNISLENSQEACILKEDSRKPELFSPEQYVTAASPLTKIQFNENTNLTVFQKKQETTLISKITVNSNSEELFPDNENNFVFQITSEKSIPILENTKELHEADIICLREPVLKNSATAARTDLGDKQAAKVSITNNFVSSNTVHDLTEKSRNSVKQQPKMTLSQDSKSDVSLDINMKSNRNNDCMDKWARLSDSISSHSFGNGFRTASNKEIKLSEHNIKKSKMFFKDIEEHFPTSLACIETVNTLSLKSQKKPSRPHAVDSQSMNTISGCVQNSAFICDSENSHTAPILSLKEDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSDIIQNNPFEMPENQMSVLKTTSEEWKDVDLPLTVNVPSSSQVDSSKEFEDRVGDKQKFACLSTTNCNKSTSGNSTDKNEVEFRGFYSARGTKLSISSEALQKAMKLFSDIENVGGTPAEVDPRIFSLSKCNNSDVSEFKEEDYSNDKNLSEKNNKCQLVVQNNIEMTAGIFVEENTEDYKRNTENEDNECIGFVCNLRESDGGSSSKNDTVSIHKDEDVLPCTDQHNMYLKSSRQYMMEGNSQNKEDLSDLTCLEVVKAEETFHVNMSNKSQSTANKMRQNIKNFDTFGLSFQTASGKNISISKESLNKVVNFFDEKCTEEEMNNFSDSSNSELLSGINTNKIDISSHEELDKVKDKILKESDSIGIENQLLTLQQGQEYEIKKIKEPTMLGFHTASGKKVKIVKESLDKVKNLFDEKKQDNSEVTNFSHQGAKTLMDREVCKEGFELACETVDVTAQKHEEMQNSLEEKKLVSEESAVPPWLLSDHLYRQTENLSITNSISLKVKVHENIEETAKSPMTCYTNQPTCSAIENSALAFYTGHGRKISVSQASLFEAKKWLREGELDDQTEKKNSADYVGNLSCGNHSNRITTENDKNFSEEQDPTYLSNSMSNSYSCHSDFCHSSEVFNKSEYLSKNKMGNSGIEPVVQNVKDRKNISFSEVMSTVREANTYPQAVDESTCVQKLVTNSSPCRNKNTATEMVISDSNNFEIEPPAFGTASDKTKVRERLTDNGGKVIKQNTESKSDTCQTKIVTGSHKALEDSEDITFPDSPESEEHRMRSHDVSPDIQSEPILCHDPGMSGLEKVSEIPPFHINLKTSDICKLNVEKHPRSVSSMNACGVFSTASGKSVHISDAAFQKAKQVFSKIEDDAKQLLSKVSFKSNEEQSDKFSGENTKIHTPQNLLSSAFSGFSTASGKQVPVSESSLCKVKGMFEEFDLIRTERSLQHSPTSRQNESKILPLSCIDKRTPEHSVSSKAEKDYSKEFKLSNNRNVESDSSENNHSIKVFPSLIQCKQDKQQLVLGTKVLLVENFDLLGKEQILPKNIKMEIGKAETFPNLPVKTNTEICSTNSKDLENYFETEAVDIARAFMEDGELTDSELLSHAKHSLFTCQKNEEAVLLNSGIGKRRGGALATVGEPPTKRNLLNEFDRIIENQEKSLKPSKSTPDGTVKDRRLFMHHTSLEPVTCGPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQKNIDERSSGDSENNGSEIHQLNKSNSNQTAAVMFTKGDKEPLDLITNLQNARDIQDKQIKKKQKQRIFPQPGSLYLAKTSTMPRISLKVAVEGRVPSACSHKQYMYGVSKHCVKINSKSAESFQFHTQDYFGKEGLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPQLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLFQLKYRYDVEIDRSRRSAIKKIMEKDDTAAKTLVLCVSEIASLSTDTSETPSSKTSGVDTTKAAVVELTDGWYAIKAQTDPPLSALIKNGRLTVGQKVIIHGAELVGSPDACTPLEAPESLMLKISTNSTRPARWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDIIVQRAYPIQWMEKTPSGLYIFRNEREEEKEATKHAEAQQKKLEALFTKLQAEFEEHEDNVTERYIPPRALTRQQVRALQDGAELYEAVKNAADPGYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQGEQILPRDVTTVWKLRIISYKKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLAASKSKSKSERANIQLTATKKTQYQQLPASDEILFQVYQPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPEYKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSPSEMKYQSPLSLSKPKGKSISTPVSAQMTSKSCCKGEKEIDDPKSCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTRYETPIKKKELNSPQMTLLKKFNDISLLEDDSIADEELALINTQALLSGSSGEDQRMSINESTRTAPTSAEDHLTLKRHYTTRGIKERENSQARTEEHETNMQDTSTKKYLQ</mol_seq> | |
570 </sequence> | |
571 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">vicugna_pacos</property> | |
572 </clade> | |
573 <clade branch_length="0.007047"> | |
574 <confidence type="bootstrap">2</confidence> | |
575 <taxonomy> | |
576 <id>91561</id> | |
577 <scientific_name>Cetartiodactyla</scientific_name> | |
578 </taxonomy> | |
579 <clade branch_length="0.034189"> | |
580 <name>ENSTTRG00000010541</name> | |
581 <taxonomy> | |
582 <id>9739</id> | |
583 <scientific_name>Tursiops truncatus</scientific_name> | |
584 </taxonomy> | |
585 <sequence> | |
586 <accession source="Ensembl">ENSTTRP00000010004</accession> | |
587 <name>BRCA2-201</name> | |
588 <location>GeneScaffold_3256:41151-92800</location> | |
589 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELSSEAPPYNSEPLEESEYKISSYETNPFKTPQRKPYHQLASTPIIFKERGLTLPLYQSPLNELDKFRLDSGKDIASGKHKSCCTTKVKMNQVNDVTSPPPNSSLSESPVILRCTHVTPQREKSVICGSLFHTPKLMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTLSSTVLIVRDEEASATVFPNDSTASKSYSSHDESKKNITISGPDSENKNQTEAKTHGLEKMLEDSFGKVNSCKDHFEKSMPYVLEDEVCETVADISEEDSFPVCVSKYKTRNLQKIKTGKTRKNIFNETKTDEYEEAKIQMTENKHSFVPEMEPNDSDPLDSNVINQKPPGNGTDKISREIVPSSASEWSHLTLSGLNGTQMEKTSLLHISSSDQNNSEDIIGTEKERTNFITLENSLLHISSISETVKILNEETVVKKRDEGQCLESREDSTVVGKQALSDSSLIASPLQGIKKSVFRIRESPEKTFRADFSNNMTDANFKKEPEASKSGSEVQTVCSQKEDSLHTSSVDNGSWPATTKHTSVALKNAGLISSLKKKTKKFIYAICDETSYQGLKMQKDQESELTNSSVQFEAKPLEAPHTFTNVDSGLLHSSVKKNCLQNDSEEPALSVTSSFGTIMRKCSNNESSSNNNKTISQDLDYKEAKINKEKLQSFITTETGYVSCLQEKHCEDDPKSQRVSDIKEKVLPAVFQPALPHSEECNDILFQSQESFLHGHDNTTILTRSSKDLLSNPVVISRGKESYKMSEKIKSENCEAGFELTKSISMEKNQETCVVNENSKKAELLSPEKYITEASPSMKVQFNQNTNLTVIQKDQEETTLISKLTVPPNSEELFPDKENNFVFQTTTERNIPVLGNIKEVHEADLSCLREAVPENSAIVACTDIDDGQAAKVSITKDFGSSDVVCDLAEKNRNSVKQPPIMTLGQDSKSDVSLDIDMKSNRNNDCMGKWAGLSDSISSHNFGRGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTSLACVEIVNTVSLENQKKGSRPHELDSQSVNTVSGYVQSSAVVSDSGNSHTTPLVLSLKGDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHMLQSNPFEMPENQITVLNTTSEEWKDVDLHLTINAPSLSQVGSSKKCKGIVGGKQKLACFSTTNCNKSASGYLTDKNEVEFRGFYSARGAKLNVSSEMQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXCNDSDVSMFNVENYNDTNLSEKNNECQLTLQNNIEMTTGIFVKEYTEDYRRNTENEDNKYTGFVCNLESDGNASSKNDTVYIRKDENGLPCIDQQNIHLKLSSQFMKEGNIQIKGLSDLTCLEVVKAEETFNVNMSNKKESATNKMRQNIKDFDVFDLSFQTASGKNIRVSKESLNKVVNFFDEKSAEELTNFSDSSNSELLSGININKIDISSHEETDMVKNKILKGGDPVGIKNQVLTLQQRPECEIKKIIEPAMLGFHTASGKKVKIAKESLDKVKNLFDEKKQNNSEITNFSHQGAKTLKDRELCKEGLELACETVEITAPKHEEMQYSLEEKRLVSETGMPPRFLSDHLYRQSENLKISNSISLRKVHENIEEETRKSPITCYTDQSTCSAIENSALAFYTGRGRKISVSQASLFEAKKWIREGELNNQLEKINSADCVGNPSCGNSSNSIITENDKNLSEKQDSTSLSNSMSNSYSYHSDFSHSNELFNKSEYLSKNKSHNSDIESVVRNVKDRKNTSFSEIISTVREANINPQAVDKDSCVQKLVTDSSPCKNTNTAVEVAISDSNNFETEQPALSIASDKIAFVSHETKVRERFTDNCRKVTKQNTESESGTGRKKIVTHSHKALGDSEDIIFPNSPDSEEHSMHSHEVFPDIQSEHLLQHDQSISGLEKVSKTPLCHINLKTSDKCKFNMGKCPKSVSSVNVCGIFSTASGKSVQVSDAALQKARQVFSKTEDSGKQLFPQVSFKSNEEHSNKFAREENTVIHTPQNLLSSAFSGFSTASGKQVPVSESAFCKVTGMFEEFDLIGTECSLQHSPPSRQDLSKILTLSCIDKRTSEHSVSSKTGKAYNEEFKLSNNYNIESGSSENNHAIKASPYLSQFKQDKQQLMSGTNVSHIDNIRLLGKEQALPKNIKMEIGKTETFPDFPMKTNTEVCSPNSKDPEKYFETEAVEIAKAFMEDDELTDSELLSHAKHSHFTCQKNKETVLINSGIGKRRGDALVTVGEPPIKRNLLNEFDRIIENQGKYLKASKSTPDGTMKDRRLFMHHISLEPVTCGPSCTSTERREMQNPNFTASGQEFLSKSHFSEHPTLEKSSSSLSVSGQPLCKVPAPRNEKRRHSTTTGKPMKVFVPPFKTKSHVHRDEQCVNRNTNFEENKQKQKNIDEHGSGDRENNVNDSEIHQTTAMLFTKGEEEPLDLITNLQTARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTMPRISLKVAVESRVPTACSHKQLYRYGVSKHCVKINSKNAESFQFHTQDYFGKESLWAGKGIQLADGGWLIPSNDGMAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLILCVSEIISLSTNISETSSSKINSMDTTKVAVVELTDGWYAIKAQVDPPLLALLKNSRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISANSTRPACWYAKLGFFSNPRPFPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSSGLYIFRNEREEEKEATKYAEAQQKKLEALFTKIQAEFEEHEENITERCIPSRVLTRQQVRALQDGAELYEAVKDSPDPSYLEGYFSEEQLRALNNHRQTLNDKKQAQIHVELRKAMESAEQGEQILPRDVTPVWKLRITSCKRKEKDSGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWLPESKSGIPTLFAGDFSMFSASPKEGHFRETFHKMKNTIENIDIFCNDAENKLIRILNTNNPKWSTPTKDYTSAPHTAQTVLGTGNKFLMSSPSSEMDYQSPLSLCKLKGKSVSTPAAAQMTSKSCCKGEKETDDPKTCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPMKKKELNSPQMTPLKKFNDISLLEGDSIADEELALINTQALLSGSAGENQLKSISESTRTTPTGPKDYLRLKRPYTASVVKEQGNSPAGTEEQKANMQDTSTENYIQ</mol_seq> | |
590 </sequence> | |
591 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tursiops_truncatus</property> | |
592 </clade> | |
593 <clade branch_length="0.001255"> | |
594 <confidence type="duplication_confidence_score">0.3333</confidence> | |
595 <taxonomy> | |
596 <id>91561</id> | |
597 <scientific_name>Cetartiodactyla</scientific_name> | |
598 </taxonomy> | |
599 <events> | |
600 <type>speciation_or_duplication</type> | |
601 <duplications>1</duplications> | |
602 </events> | |
603 <clade branch_length="0"> | |
604 <confidence type="bootstrap">8</confidence> | |
605 <taxonomy> | 728 <taxonomy> |
606 <id>91561</id> | 729 <scientific_name>Cercopithecinae</scientific_name> |
607 <scientific_name>Cetartiodactyla</scientific_name> | 730 <id>9528</id> |
731 <common_name>Old World monkeys</common_name> | |
608 </taxonomy> | 732 </taxonomy> |
609 <clade branch_length="0.123054"> | 733 <clade branch_length="0.006309"> |
610 <name>ENSSSCG00000020961</name> | 734 <name>ENSPANG00000013323</name> |
611 <taxonomy> | 735 <taxonomy> |
612 <id>9823</id> | 736 <id>9555</id> |
613 <scientific_name>Sus scrofa</scientific_name> | 737 <scientific_name>Papio anubis</scientific_name> |
738 <common_name>Olive baboon</common_name> | |
614 </taxonomy> | 739 </taxonomy> |
615 <sequence> | 740 <sequence> |
616 <accession source="Ensembl">ENSSSCP00000022872</accession> | 741 <accession source="Ensembl">ENSPANP00000002726</accession> |
617 <location>GL894428.1:2554-22348</location> | 742 <location>17:11280025-11304342</location> |
618 <mol_seq is_aligned="0">IDLITNLQIARDIQDMRIKKKKRQRIFPQPGSLYXAKTSTLPRISLKEAVEGRVPSACSHKQLYMYGVSKHCIKINSKNAESFEFHTQDYFGTEGLCAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIALGTNITETRSNKTNSVDTTKVAMVELTDGWYAIKAQLDPPLSALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKVNSITAHSCFKKKKTKKTVTDSKNYIFLCVLFGGGGKSEIIIERYYILKVTIIQFLYLFPNLPTREHSSFRFSWSMFSSVLKFIVQLLSHAFFPLENAAERCLPSRALTRQQVRALQDGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQLLNDKKQAQIQLEFRKAMQSAEQGEQILPRDVTPVWKLRIISYNKKEKDSVILSIWRPSSDLCSLLTEGKRYRIYHLTAAKSKSKSERANIQLTATKSTQYQQLPASDEILFQLYRPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKTGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLVAASNLQWRPESKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIENIDIFCNEAENKRIHILNAYNAKWFTPTKDCTLEPQTPQTVLGTGNKFLMSSPSTEMNYQSPLSLYKPKGKSVSTPVSAQMTSKSCCKGEKEIEDPKNCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKHEIPIKKKQLNSPQMTPLKKFNDISLLEGDSIADEELALINTQALLSGSAEENQLTSISESTRTVSTSPKDYPRLKRHHTTS</mol_seq> | 743 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPVSLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKERGLTLPPYQSPVKELDTFRLDLGRNVPSSRHKSLRTVKAEMHQADDVTGPLLNSCLSESPVVLQCTHVTPQRNKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLNTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHKDYILAVKQAVSETSPMASSFQGIKKSIFRIRESPKETFNASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVERSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEELQLFITPEADSLLFLQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSSLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDELKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLIPKITVNPNSEELFSDNENNFVFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNIVYDLAEENKNSVKQHLKITLGQDLQPDILNIDKIPDKNNDCMDKWAGPLDPISNHSFGGSFRTASNKEIKVSEHNIKKSKMFFKDIEEQYPASLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSVENRDAGLVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVAFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSMFKIENHNDKTVSGKNKCHLMLQNNIEMTTGTFVEEITENYKINTENEDNRYTAASRNSRNLEFVGSDSSKNDTVCIHKDEKDLPFTDQHNICLKLSGQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFDISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEKIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETVEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDHLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSTKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSYSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKTLVFPK</mol_seq> |
619 </sequence> | 744 </sequence> |
620 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sus_scrofa</property> | 745 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">papio_anubis</property> |
621 </clade> | 746 </clade> |
622 <clade branch_length="0.045414"> | 747 <clade branch_length="0.001835"> |
748 <name>ENSMMUG00000007197</name> | |
749 <taxonomy> | |
750 <id>9544</id> | |
751 <scientific_name>Macaca mulatta</scientific_name> | |
752 <common_name>Macaque</common_name> | |
753 </taxonomy> | |
754 <sequence> | |
755 <accession source="Ensembl">ENSMMUP00000009432</accession> | |
756 <name>BRCA2-201</name> | |
757 <location>17:11687584-11777925</location> | |
758 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKDQGLTLPLYQSPVKELDTFRLDLGRNVPSSKHKSLRTVKAEMHQADDVTCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLNTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHRDYILAVKQAVSETSPMASSFQGIKKSIFRIRESPKETFSASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTNKFIYAIRDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVKRSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEKLQLFITPEAHSLSFPQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSPLYDHENASTLILTPTSKDVLSNLVKISRGKESYKMSDELKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLIPKITVNPDSEELFSDNENNFVFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNTVYDLAEENKNSVKQHLKMTLDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSEENIEAGLVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVEFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSMFKIENHNDKTVSGKNKCQLILQNNIEMTTGTFVEEITENYKINTENEDNKYTAASRNSRNLEFVGSDSSKNDTVCIHKDEKDLPFTDQHNICLKLSGQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFDISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEKIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETVEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDHLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSCSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKNTSFSKVISSVKDANTYPQTVNEGICVEELVTSSSPCKNKNAAIKLSISNCNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFGKVIKENNENKSNICQTKIVAGCYEALDDSEDIFHNSLDSDECSMHSHKVFADIQSEEILQHNQNMSGLEQVSKMSPFDVSLETSDICKCSIGKLPKSVPSTNTCGIFSTASGKSVQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTTIHTPKHLISSQKDFSHNVVNSSAFSGFSTASGKQVSISESSLHKVKGMLEEFDIIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKACSKEFNLSNNFNVEGGSSENNHSIKVSPSLSQFKQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDGELTDSELPSHATHSLFTCPQNEEMVLSNSRIGKRRGEALISAGEPPIKRNLLNEFDRIIENQEKSLKPSKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGKPTKVFIPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAATVIFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKINSKNAESFQFYTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAIKAQLDPPLLAILKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAVTKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNIVENIDILCNEAENKLMHILHANDPKWSTPIKDWTSESYTAQIIPSTGNKLLISSPNCELYYQSPLSLCMAKRKSVSTPISAQITSKSCKGEKEIDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKNETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTTPTSSKDYLRLKRRCTTSLIKEQESSHSDKEECENNKQDTITTKKYE</mol_seq> | |
759 </sequence> | |
760 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">macaca_mulatta</property> | |
761 </clade> | |
762 </clade> | |
763 <clade branch_length="0.005017"> | |
764 <name>ENSCSAG00000017920</name> | |
765 <taxonomy> | |
766 <id>60711</id> | |
767 <scientific_name>Chlorocebus sabaeus</scientific_name> | |
768 <common_name>Vervet/AGM</common_name> | |
769 </taxonomy> | |
770 <sequence> | |
771 <accession source="Ensembl">ENSCSAP00000013938</accession> | |
772 <name>BRCA2-201</name> | |
773 <location>3:11071682-11155213</location> | |
774 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKDQGLTLPLYQSPVKELDTFRLDLGRNVPSSRHKSLRIVKAEMHQADDVTCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEESSETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVCETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLSTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESQRDYILAVKQAVSETSPIASSFQGIKKSIFRIRESPKETFSASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTKFIYAIHDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVKRSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEKLQLFITPEADSLSFLQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSPLYDHENASTLILTPTSKDVLSNLLMISRGKESYKMSDEIKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRGASPSRKVQFSQNTNLRVIQKDQEETTLIPKITVHPDSEELFSDNENNFLFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNIVYDLAEENKNSVKQHLKMTLGQDLQPDILNIDKIPDKIDDCMDKWAGPLDPISNHSFGGSFRTASNKEIKVSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSEENRDAGLVIMNAPSIGQVNSSKQFEGTVGIKQKFAGLLKSDCNKSASGYLTDENEVEFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSVFKIENHNDKTVSEKNKCQLMLQNNIEMTTGTFVEEITENYKINTENEDNKYTAASRNSRNLEFVSSDSSKNDTVCIHKDEKDLPFTDQRNICLKLSGQLMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFGISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEEIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSSSHQWAKTLKYREACQDLELACETVEMTTAPKCKEMQNSLNNDKNLVCIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPTTCYTNQSPYSVIENSALAFYTSCSRKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSYSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKNTSFSKVISSVKDANTYPQTVNEGICVEELVTSSSPCKNKNAAIKLSISNCNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFGKVIKENNENKSNICQTKIVAGCYEALDDSEDIFHNSLDSDECSMHSHKVFADIQSDEILQRNQNMSGLEQVSKMSPCDVSLETSDICKCSIGKLPKSVPSTNTCGIFSTASGKSVQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTTIHTPKHLISSQKDFSYNVVNSSAFSGFSTASGKQVSISESSLHKVKGMLEEFDIIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKACSKEFNLSNNFNVEGGSSENNHSIKVSPSLSQFKQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDGELTDSELPSHATHSLFTCPQNEEMVLSNSRIGKRRGEALISAGEPPIKRNLLNEFDRIIENQEKSLKPSKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNVAVSGHPFYQVSATRNEKMRHLITTGKPTKVFIPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAATVIFTMCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKISSKNAESFQFYTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLIALLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEEDTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGNFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAVTKKTQYQQLPVSDEILFQVYQPREPLHFSKFLEPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPIKDCTSESYTAQIIPGTGNKLLISSPNCELYYQSPLSLCMAKRKSVSTPVSAQITSKSCKGEKEIDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVNESTRTTPTSSKDYLRLKRRCTTSLIKEQESSHSGKEECENNKQDTIITKKY</mol_seq> | |
775 </sequence> | |
776 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">chlorocebus_sabaeus</property> | |
777 </clade> | |
778 </clade> | |
779 <clade branch_length="0.003281"> | |
780 <confidence type="bootstrap">77</confidence> | |
781 <taxonomy> | |
782 <scientific_name>Hominoidea</scientific_name> | |
783 <id>314295</id> | |
784 <common_name>Apes</common_name> | |
785 </taxonomy> | |
786 <clade branch_length="0.011748"> | |
787 <name>ENSNLEG00000001048</name> | |
788 <taxonomy> | |
789 <id>61853</id> | |
790 <scientific_name>Nomascus leucogenys</scientific_name> | |
791 <common_name>Gibbon</common_name> | |
792 </taxonomy> | |
793 <sequence> | |
794 <accession source="Ensembl">ENSNLEP00000001277</accession> | |
795 <name>BRCA2-201</name> | |
796 <location>GL397329.1:5273331-5357426</location> | |
797 <mol_seq is_aligned="0">MPIGSKERQTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYRSPVNELDKFRLDLGRNVPNSRHKSLHTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVRGSLFHTPKFVKGRQTPKHISESLGAEVDSDMSWSSSLATPPSLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIPSVTDSENTNQREATSHGFGKTLGNSFKVNSCKDHIGKSMPNVLEDELYETVVDTSEEDSFSLCFPKYRTRNLQKVRTSKTRKKIFREANADECEKSKNQVKEEYSFVSEVQSNDTDPLDSNVANQKTFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNISEKDLLDTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEKHLESHRDCILAVKQAISATSPVASSFQGIKKSIFRIRESPKETFNASFSDHMTDPNFKKETEASESGLEIHTVGSRKEDSLCPNSIDNGSWPATTTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYQGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTVLRKCSRNETCCSNNTIISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEILATACHPVQHSKVEYSDTDFQSRKSLLYDHENASILILTPTSKDVLSNLVMISRGKESYKMSDKVKGNNYETEVELTKNIPMEKNQDVCALNENSKNVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLISKITVNPDSEEHFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTVVLYADIGDKQATQVSTKKDLVYDFAEENENSVKQHLKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHNFGGSFRTASNKEIKLSERNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVSDCKNSHINPRMLFSKQDFNSNHNLTPSQKAEITELSTMLEESGSQFEFTQFRKPSYILQKNTFEVPENQMTILNTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVEFRGFYSAHGSKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKCHDSVVSMFKIENHSDKTVSEKNNKSQLILQNNIEMTIGTFVEEITENYKRNTENEDNKYTVASRNSHNLEFDGSDSGKNYTVCIHKDETDLPFTDQHNICLKLSDQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETSDKSFQTASGKNISVTKQSFNKIVNFFNQKPEELHNFSLNSELHSDIRKNKMDILSHEETDIVKNKILKESVPGGTGNQLVTFQEQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTIEITSFSHQRAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNDKNLVSIETVVPPKLLSDNLCSQTENLKTSKSIFLKVKVHENVEKETAKSPAACYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDSQPERINTADYVGNSLYENNSNNTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYISKNKLDSGIEPVLKNVEDQKNTSFSEVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFSKVIKENNENKSKICQTKIVAGCYDDCMDDSEDIFHNSLDNDECSMHSHKVFADIQSEEILQHNQNMSELEKVSKISPCDVSLETSDICKCSIGKLPKSVSSTNTCGMFSTGSGKSIQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIHTPKHLISSQKGFSYNVVNSSAFSGFSTASGRQVSISESSLRKVKGMLEEFDLIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFKQDKQQLVSGAKVSLVENIHVLGKEQASPENVKMEIGKTETFSDVPVKTNTEVYSTYSKDPENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPKNEEMVLSNSRIGKRRGEALISVGEPPIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTTPGQEFLSKSHLYEHLTLEKSSSSLAVSGHPFYQVSAARNEKMRHLITTGKPAKVFVPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAAAVIFTKCEEEPLDVITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGCQVPSACSHKQLYTYGVSKHCVKINSKNAESFQFHTQDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSADTSETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPTQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHVLIAASNLQWRPESKSSLPTLFAGDFSMFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSEPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSASTPVSAQMTSKSCKGEKEIDDQKKCKKKRALDFLSRLPLPPAVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQITPFKNFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSKDYLRLKRQCTTSLIKEQESSQAGTEECEQNKQDTITTKKYI</mol_seq> | |
798 </sequence> | |
799 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">nomascus_leucogenys</property> | |
800 </clade> | |
801 <clade branch_length="0.002685"> | |
802 <confidence type="bootstrap">100</confidence> | |
803 <taxonomy> | |
804 <scientific_name>Hominidae</scientific_name> | |
805 <id>9604</id> | |
806 <common_name>Great apes</common_name> | |
807 </taxonomy> | |
808 <clade branch_length="0.007811"> | |
809 <name>ENSPPYG00000005264</name> | |
810 <taxonomy> | |
811 <id>9601</id> | |
812 <scientific_name>Pongo abelii</scientific_name> | |
813 <common_name>Orangutan</common_name> | |
814 </taxonomy> | |
815 <sequence> | |
816 <accession source="Ensembl">ENSPPYP00000005997</accession> | |
817 <name>BRCA2-201</name> | |
818 <location>13:31850770-31940736</location> | |
819 <mol_seq is_aligned="0">MPVGSKERPTFFEIFKTRCNKADLGPISLHWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFRLDLGRNVPNSRHKSLRTVKTKMDQADDVSCPLLSSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKYVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDENLKKNDRFIPSVTDSENTDQREATSHGFDKTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVADTSEEVSFSLCFSKYRTRNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHRDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNSIDNGSWPATTTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYKGKKMPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNEEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQDSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDICASNENDKNVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFLDIENDFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDIGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDVLNIDKIPDKNNDYMDKSAGLLGPISNHSFGGGFRTASNKEIKLSEHNIKKSKMFFRDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLPSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQMTILNTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSAAGYLTDENEVGFRGFYSAHGAKLNVSTEALQKAVKLFSDIENIGEETSAEVDPISLSSSKCHDSVVSMFKTENHDKTVSEKNNICQLILQNNIEMTSGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKGFETFDTSFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSHEETDIVKNKILKESVPVGTGNQLVTFQEQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTCEITSFSHQWAKTLKYRDARKDLELARETIEITTAPKCKEMQNSRNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLTEAKKWLREGIFDGQPERVNTADYVGNSLYESNSNTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVHNDSGYLSKNKLDSGIEPVLKDVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCENKNAAIKLSISNSNNFAVGPPAFRIASGKIICVSHETIKKVKDIFTDSFSKVIKENNENKSKICQKKIVAGCYEALDDSEDILHNSLDNDECSMHSHKVFADIQSEEVLQHNQNMSGLEKVSKISACDVSLETSDICKCSIGKLPKSVSSTNTCGIFSTASGKSVQISDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTRQENTAIHTPENLTSQKGFSYNVVNSSAFSGFSTASGKQVSILEGSLHEVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPCVDKRNPEHSVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQTSPENVKMEMGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPKNEEMFLSNSRIGKRRGEPLISVGEPPIKRNLLNEFDRIIANQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSRLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMKHLITTGKPTKVFVPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDTEIHQFIKNNSNQAAAVIFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKENLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKFQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENVDILCNEAENKLMHILHANDPKWSTPSKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSFCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSKDYLRLKRRCTTSLIKEQESSQAGTEECEKNKQDTVTTKKYI</mol_seq> | |
820 </sequence> | |
821 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pongo_abelii</property> | |
822 </clade> | |
823 <clade branch_length="0.004982"> | |
623 <confidence type="bootstrap">100</confidence> | 824 <confidence type="bootstrap">100</confidence> |
624 <taxonomy> | 825 <taxonomy> |
625 <id>9895</id> | 826 <scientific_name>Homininae</scientific_name> |
626 <scientific_name>Bovidae</scientific_name> | 827 <id>207598</id> |
828 <common_name>Hominines</common_name> | |
627 </taxonomy> | 829 </taxonomy> |
628 <clade branch_length="0.017264"> | 830 <clade branch_length="0.000206"> |
629 <name>ENSOARG00000011179</name> | 831 <confidence type="bootstrap">100</confidence> |
630 <taxonomy> | 832 <taxonomy> |
631 <id>9940</id> | 833 <scientific_name>Homininae</scientific_name> |
632 <scientific_name>Ovis aries</scientific_name> | 834 <id>207598</id> |
835 <common_name>Hominines</common_name> | |
836 </taxonomy> | |
837 <clade branch_length="0.003065"> | |
838 <name>ENSPTRG00000005766</name> | |
839 <taxonomy> | |
840 <id>9598</id> | |
841 <scientific_name>Pan troglodytes</scientific_name> | |
842 <common_name>Chimpanzee</common_name> | |
843 </taxonomy> | |
844 <sequence> | |
845 <accession source="Ensembl">ENSPTRP00000009812</accession> | |
846 <name>BRCA2-201</name> | |
847 <location>13:31957353-32040817</location> | |
848 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLCTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREATSHGFGKTSGNSFKVNSCKDHTGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQTSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQNNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTISEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTSVEEITENYKRNTENEDNKYTASSRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNNLSAKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTINEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSTNTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLVTTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQAAAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAFPWGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAEKKLMHILHANDPKWSTPTKDCPSGPYAAQIISDTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESAQASTEECEKNKQDTITTKKYI</mol_seq> | |
849 </sequence> | |
850 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pan_troglodytes</property> | |
851 </clade> | |
852 <clade branch_length="0.001896"> | |
853 <name>ENSG00000139618</name> | |
854 <taxonomy> | |
855 <id>9606</id> | |
856 <scientific_name>Homo sapiens</scientific_name> | |
857 <common_name>Human</common_name> | |
858 </taxonomy> | |
859 <sequence> | |
860 <accession source="Ensembl">ENSP00000369497</accession> | |
861 <name>BRCA2-001</name> | |
862 <location>13:32315474-32400266</location> | |
863 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQNSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPEKNNDYMNKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVAKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITAAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSANTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPKNVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSKLPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQAVAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESSQASTEECEKNKQDTITTKKYI</mol_seq> | |
864 </sequence> | |
865 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">homo_sapiens</property> | |
866 </clade> | |
867 </clade> | |
868 <clade branch_length="0.019829"> | |
869 <name>ENSGGOG00000015808</name> | |
870 <taxonomy> | |
871 <id>9595</id> | |
872 <scientific_name>Gorilla gorilla gorilla</scientific_name> | |
873 <common_name>Gorilla</common_name> | |
633 </taxonomy> | 874 </taxonomy> |
634 <sequence> | 875 <sequence> |
635 <accession source="Ensembl">ENSOARP00000011988</accession> | 876 <accession source="Ensembl">ENSGGOP00000015446</accession> |
636 <name>BRCA2-201</name> | 877 <name>BRCA2-202</name> |
637 <location>10:28872321-28924433</location> | 878 <location>13:14169243-14261094</location> |
638 <mol_seq is_aligned="0">MPIGCKERPTFFDIFKTRCNKADLGPISLNWFEELSSEAPPCNSELSEELEYKISSYETNPFKTPQRKPYHQLASTPVIFKEQSLTLPLYQSPLKELHKFRSDSGKDIANSKHKSCCRVKAKINQANDVISPPPNSSLSESPVVLRCTYVTPQREKSVVCGSLFHTPKLIKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVQDEEASAAVFPSDTTTILKTYFSNHDESLKNSKFIPSGPDSDNKNQTEAESHGLEKILEDSFGKVSSCKDHFEKSLPNVLEDEVHETVAGISEEDSLPVCVSKYKTKKLQKTKTGKTRKNIFHETKTDDCEGAKKEMTESKHSFVCETEPNDSDPLDSNVINQKPAGNGTDIISREVVPSSVSEWSQLTLSSLNGTQVEKTSLLHISCDQTNSEEDFIGTEKDCTNFITLENSLPHISSISKIVKILNKETVVNKTDEGRCLESHEDPTTMGQQTLTDSSPLQGIKKSTFRIRESPEKILREDFSNNVTDTNLKEEPEDSKSESEIQTIYSQKEDFVCSSSGDNESWPATTKHTSEALKSTGLISTLKKKTKKFIYVINDKTTYQELKIQKDQESELTNSSAQFEAKPLEAPHTFTNVDSGSLHSSVQKNCSQNDSEEPSLSLTSSFGTVLRKCFNNESSSSNNQKISQDLYCKETNINKEKWQSFITTETDYVSCLQDKHCEDNPKSQGVSDIKEKVLPVVCRPELPHSEECSDTVFQFQESFLHDHENTTILTPSSKDLLSNPVVISRGKQSYKMSEKIKSKNCEAGFELTKYISMEKNQETCVLNENSKKPEMLSPEKYITGASPSVKVQCYQNMNLTVIHKDQEETTLISKRTVNPNSEELFPDNENNYIFQTTSERNIPILGNIKEIHEADLSCLKEPVLKNSVIVTSTDMDGGQAAKVSITKDSVSSNIVHDLIEKNRNSIKQQPKMTLGQDSKPDVSLDTDTRSNRNNFCGDKWAGLSDLTSGHSFGNGFRTASNKEIKLSEHNIKKSKTLFKDIEEHYPASLAWVESVKSLENQKKEGQPHDHDSQSIDTVCGYVQNGAVVSDGENSHTTPPVLSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHRLQSNPFEMPETQMPVSNTTSEEQKDVDLHLTASVPSLSHVDNSKKCGLVGHEQKLICLSTTKCNKSVSGSLTDKSEEEFKGFYSARGTKLNFSNEALQKAMKLFSDIEKVSEETPAEVDPGSFSSDQCNDSDVSMFKVENYSNDKNLSEENNKCQLILQSNFEMTTSIFVKENTEDFKRNTENKDNKCTDFVCNLGESDGCASSKNDTVYVHKDESGLPYTDQYNIHLKLSHHFMKEENIPIKEGLSDLTCLEVMKAEETFNKSDKKEPIANKMRQNIKDFGVFDLSFWTASRKNIRVSKESLNKVVNFFDEKCTEKEFNHFSDSSNSELLSGIHINKKDISSHEETSMFKNKMLKESSPAGIENQILTLQQREKCELKKIREPTMLGFHTASGKKVKIAKESLDKVKNLFDETKQDNSEVTGFIHQEAKMLKNKEVCKEGLDLACEIVKVTAPQHEEMQNSLEEKKLVSEETAMPPRFLSDHLHRQTENLHTSHSISLKVKVHENMEEETAKSPLSCYTNHSTFSAIDNSALAFYTGHGRKISVSQASLLEAQKWLREGELNDQPEKTNSSEIICLKEYTGDYVQNPSCGNSSNSIITENDKSLSQKQDSTSLNNNMPNSYSYHSDFCHSSEGFNKSEYLSKNKIDNSGIEPVVKNVKDRKNTSFSEVIPTIRETNINPQALDKDSCVLKLMTKFSPCKNKKTAVEVALSNSNNFETEPPAYSTASDQIAFVSGETTVRERFTDNCRNIYIKQNTETKSGTDQTKTVTESHKALGDSEDVIFPNSPDNEEHNMHSQDVSHDIQGEPILQHDQSTSGLEKVSEIPLRHVDLKTSDRCKFNMGNHPRSVSSMNACGIFNTASGKSVQVSDSALRKARQVFSKSEDSAKQLFSTVSFESNEHSDIFRRKDNIMAHNPPNLLSSAFSGFSTASGKHVPVSESALRKVKGMFEEFNLIETEYSLQHSPTSTQDISKILPVSCTDKRTPEHSLSSKMEKAYNKEFKLSNNYNTESGSSENNHSIKVSSYLSEFKQDQQQSVLGTRVSHIDNIHLTGKKQTLPKNIKKEIGKTETFPDLVKTNTEICSTDSKDPENYFETEAVEIAKAFMEDGELTDSEFPSHAKHSPLTCHKNEETVLSNSRIEKRKGDALITVGEPPIKRNLLNEFDRIIENQGKSLKASKSTPDGTMKDRRLFMHHFSLEPVTCGPSCVTTERQEIQNPNFTAPGQEFLSKSQFYEYLTLGKSSSNLSISGQPLCKVPDPRNEKRRHSITVGKPMKVFVPPFKTKSHIHRDEQFVGKNTNLENKQKQKNVDEHGSGDSENNVNNCETHQTTTIHFTKGEEEPLGSITNLQNARDIQDMRIRKKQRQRIFPQPGSLYLAKTSTMPRISLREAVEGRIPSVCSHKRLYMYGVSKHCVKINSKNAEAFQFHTQDYFGKEGLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPRLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDISEPSSNKTSSVDATKVAIIQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSTGLYIFRNEREEEKEATKYAEVQQKKLEALFTKIQAEFEDHEENVTEQCIPSRALTRQQVRALQDGAELYEAVKNAPDPSYFEGYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPRDVTPVWKLRIMSYKRKEKDSVILNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFSKLLDSDFQPPCSEVDLIGFVVSVVKKIGIAPLVYLSDECHNLLAIKFWIDLNEDIIKPHILIAASNLQWRPECKLGIPTLFAGDFSMFSASPKEGHFQEAFHKMKNTVENIDMFCEDAKNKLIRLLNASNPKWSTPTKDCTSAPPTAQTVLGSGNKFPLSSPSSEMNYQSPLSLCKLKEKSVCTPVSAQVTSKSCCKGEKETDDRKSCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPMKKKELTYPQMTPLENLNNISLLESDSIADEELALINTQALLSGSAGGNQLTSTSKSNRTVPTSPKDYVGLKRPYTTSVIKERENSPARTEEQETNMQDTSAIKNISKRLQRRLKPK</mol_seq> | 879 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKAVDLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREATSHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKISHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLNISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFGASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQTSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRNETCSNDTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNPTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQLDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGAKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLREAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASDETIKKVKDMFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSTNTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPENEEMVLSNSRTGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKEHQEIQNPNFTAPGQEFLSESHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSSDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKVKQLKFLCSFWEVQRSFLSLNNAFPIKKSLFYSGLENYILVLFKLLRTSSLQWLSFSCFLLIGFIYQKEQQQLGLSFLLILFLAASAQYSRVHDIYINHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPANLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEVRKAMESAEQKEKGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVISVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTR</mol_seq> |
639 </sequence> | 880 </sequence> |
640 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ovis_aries</property> | 881 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gorilla_gorilla</property> |
641 </clade> | |
642 <clade branch_length="0.011479"> | |
643 <name>ENSBTAG00000000988</name> | |
644 <taxonomy> | |
645 <id>9913</id> | |
646 <scientific_name>Bos taurus</scientific_name> | |
647 </taxonomy> | |
648 <sequence> | |
649 <accession source="Ensembl">ENSBTAP00000001311</accession> | |
650 <name>BRCA2-201</name> | |
651 <location>12:28637213-28688200</location> | |
652 <mol_seq is_aligned="0">MPIGCKERPTFFDIFKARCNKADLGPISLNWFEELSSEAPLCNSEPLEESEYKISSNETNPFKTPQRKPYHQLASTPVIFKEQSLTLPLYQSPLKELRKDIANSKHKSCCRVKAKINQANDVISPPPNSSLSESPVVLRCTHVTPQREKSVVCGSLFHTPKLIKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVQDEEASAAVFPRDTTAILKTYFSNHDESLKNNKFIPSGPDSDNKNQTKAESHGLEKMLEDSFGKVNSCKDRFEKSMPNVLEHEVHETVAGISEEDSLPVCVSKYKTKKLQKRKTGKSRKNIFHETKTDECEEAKKEMTESKHSFVSETEPNDSDPLDSNVIKQKPVGNGTDIISREVLPSSVSEWSQLTLSGLNGTQVQKTSLLHISSCDQTNSEEDLIGTEKECTNFITLENSLPHISSISKTVKILTDSSPLQDTKKSIFRIRESPEKIFREDFSNNVTDSNLKEEPEDSKSESEIQTIYSQKEDSVCSSSGDNESWPATTKYTSEALKNTGLISTLKKKTKKFIYVINDKTAYQGLKIQKDQESELTNSSAQFEAKPLEAPHTFTNVDSGSLPSSIQKKCSQNDSEEPTLSLTSSFGTVLRKCFNNESSSSTNKTISQDLYCKETNINKEKWQSFITTETDYVSCLQDKHCEDNPKSQGVSDIKEKVLPVVCRPELPHSEECSDTVFQFQESFLHDHDNTTILTPSSKDLLSNPVVIPRGKQSYKMSEKIKSKNCEAGFELTKYISMEDNQETCVLNENSKKAEMLSPEKYITGALPSVKVQCHQNMNLTVIHKDQEETTLISKRTVNPNSEELSPDSENNYIFQTTSERNIPILGNIKEVHEADLSCLREPVLKNSVRVTSTDMDGGQAAKVSITKDSVSSNTVHGLIEKNRNSVKQQSKMTLGQDSKPDVSLDTDTKSNRNNFCKDKWAGLSDLTSSHSFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPASLPWVEIVKSLENQRKGGQPRDRDSQSVDTVCGYVQSGAVVSDGENSHTTPPVLSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHILQSNPFEMPETQMTVLNTTSEEQKDVDLHLTASAPSLSHIDSSKKCEGLAGREQKMICLSTTNCNKSVSGSLTDKGEEEFRGFYSARGTKLNVSTEALQKAMKLFSDIEKVSEKTPAEVDPGSFSSNQCNNSDVSMFKVENYSNDKNLSEENNKCQLILQSNFEMTTSIFVKENTEDFKRNTENKDNKCVGFVCNLGESDGCASSKNDTVYVHKDESGLPYTDQYNIHLKLSHHFMKEENIPIKESLSDLTCLEVMKAEETFNKSNKKEPIANKMRQNIKDFGVFDLSFWTANGKNIRVSKESLNKVVNFFDEKCTEKELNNFSDSSNSELLSGININKIDISSHEETSMFKNKMLQESSPAGIENQILTLQQREKCEFKKIKEPTTLGFHTASGKKAKIAKESLDKVKNLFDETKQDNSEVTDFIHQGAKMLMDREVCKEGLDLACEIVKGTAPKHEEMQNSLEEKKLVSEETAMPPRFLSDHLQGQTENLHTSHSVSLKVKVHENMEEETAKSPITCYTNHSTCSAIENSALAFYTGHGRKISVSQASLLEAKKWLREGELNDQPEKINSSKIICLKEYTRDYVGNPSCGNSSNSITENDKSLSEKQDSTSLNNSMPNSYSYHSDFCHSSEGFNKSENLSKNKIDNSGIEPVVKNVKGRKNTSFSKVIPTIREANINPQAVDKDSCVLKLVTKFSPCKNKKTAAEVALSNSNNFETEPPAYSTASDQIAFVSRETTVRERFTDNCRNIYTKQNTEPKSGTDQTKTVTDSHKALGNSEDVIFPNSPDNEEHNMHSHDVSPDIQSEPILHDQSISGLEKVSEIPLRHVDLKTSDRCKFNMGKHPRSVSSMNACGIFNTASGKSVQVSDSALQKARQVFSKSEDSAKQFFSRVSFKSNEEHSDIFTRKENTMTHNPPNLLSSAFSGFSTASGKHVPVSESALCKVKGMFEEFDLIGTEYSLQHSPTSRQDVSKILPVSCTDKRTPEHSVSSKMEKAYNKEFKLSNNYNIESGSSENNHSIKVSSYLSEFKQDQQQSVLGTRVSHTDNIHLLGEKQTLPKYIKKEIGKTETFPDLVKTNTEICSTDSKDPENYFETEAVEIAKAFMEDGELTDSEFPSHAKHSPFTCQKNEETVLSNSRIEKRRGDALVTVGEPPIKRNLLNEFDRTIENQGKSLKASKSTPDGAMKDRRLFMHHISLEPVTCGPSCITTERQEIQTPNFTAPGQEFLSKSHFYEHLTLGKSSSNLSISGQPLCKVPDPRNEKRRHSITIGKPMKVFVPPFKTKSHIHRDEQFVGKNTNLEENKQQKNIDEHGSGDSENNVNNYSITNLQNARDIQDMRIRKKQRQCIFPQPGSLYLAKTSTMPRIPLREAVEGRIPSACSHKQLYMYGVSKHCVKINSKNAEAFQFHTQDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKKFANRCLNPERVLLQLKYRYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDISEPSSNKTSSVDTTKVAVVQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSTGLYIFRNEREEEKEATKYAEAQQKKLEALFTKIQAEFEDHEENVTEQCIPSRALTRQQVRALQDGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPRDVTPVWKLRIMSYKRKEKDSVILNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFNKLLDSDFQPPCSEVDLIGFVVSVVKKIGIVPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPGCKLGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTVENIDTFCEDAKNKLIRLLNASNPKWSTPTKDCTSAPPTAQTVLGSGNKFPLSSPSSEMNYQSPLSLCKLNEKSVCTPVSAQVTSKSCCKGEKETDDPKSCKKRRALDFLSRLPVPPPVSPICTFVSQAAQKAFQPPRSCGTKYETPMKKNELNSPQMTPRKKFNDISLLESDSIADEELALINTQALLSGSAGGNQLTSISKSTRTVPTSPKDYVGLKRPYTTSVIKERENSPARTEEQETNIPDTS</mol_seq> | |
653 </sequence> | |
654 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">bos_taurus</property> | |
655 </clade> | 882 </clade> |
656 </clade> | 883 </clade> |
657 </clade> | |
658 <clade branch_length="0.069764"> | |
659 <name>ENSSSCG00000029039</name> | |
660 <taxonomy> | |
661 <id>9823</id> | |
662 <scientific_name>Sus scrofa</scientific_name> | |
663 </taxonomy> | |
664 <sequence> | |
665 <accession source="Ensembl">ENSSSCP00000028073</accession> | |
666 <location>GL894447.1:46-18025</location> | |
667 <mol_seq is_aligned="0">LKSYFSNHDESLKKNNRFIPSGRDNENKNQREAKSHGLEKMLEDSFDKVDNCKDHLGKDELHETVADISEEDSFSLCVSKYKTRSLQKMKTGRTRKNIFNETNTYEYEEAKKQMTENKHSFVSETEPNDGDSLDSNVTSQTPFGNGTDNISKEFVPSSASEWSQLTLSGLNETQMEKTSLLHISSCDQNNAEEDCIGTDKECTNIITVENSLPHIASMSKTRTILNEVTVVNKRDEGQCVESPDDSTGVENQVISDSSLIASPLQGIKKSLFRMRESPEKTANADFPSNMTDPNLKEEPEASRSGLEIHTLCSQKEGSLCMHSADNGSWPATTKYTSVALKNTGLISTLKKKTKKFIYAINDRTSYQGLKAQKDQESELMNSSAQFEAKPFEAPHTFTNTDSVGLLHSSVQKNRLQDDSEERILSSASSLGTILRKCSNNESHSDNKTVSQDLDYKEAKIDKEKLPSFITTETDNVSCMQKKHCEDDPKSQRVLDIKEKVLPAGRHPAVPHSEEGRDTYFQSQENFLHDLDNTTILTPSSKDLLSNPVVTSGGKESYKMSEKIKSRNCKADFELTRNISMEKNQETCVLNDSSQKAELLAPEKYLTVVSPSMKVQLNQNINLTGIQKDQEETTLISKITVSPNSEELFPDNETNFVFQTPTKRNIPVLGNIMEVHEVDLSCLREPVLKNSALVTCTDIDDEQTAKGSMTKDFVSSTNRAHDLIEKNRTSVQQQPKIIQGQESKSHTSLDIDVXNRSNDCMDSWAGLSDLIASHSFGNGFRTASNKEIKLSEHNIKKSKLLFRDLEEHYPPSLACVETVNTLSLASQKKESKPHALDLPSVNTVSGCVQSSAILSDSENRHTTPPILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFKKPGHITQNSLCEMPANQMTVLNTPSEEWKDPALHLTSNAPSVSQAESSSKSEGIDGGKQKFACLSSSNCSRSASGYLADKNEVEFRGFYSARGTKLNVSRKALQKAMNLFSDIENVSEETSAAVGPGCFSSSKCNDSDVSIFKVENYSSDKSLSEKYNKCQLILKNNIERTADIFVEENTDGYKRNTENKDNKCTGLASNLGEADDSASSKTDTVYMHEDETGLPFIDHNIHLKLPNHFXTQIKEGLSDLTCLEVMRAEETFHINTSNKQSTVNKRSQKIKDFDVFDLSFQSASGKNIRVSKESLNKAVNFFDEKCTEEELNNFSDSSNSEILSGININKINISSHKETDSDKNKLLKESDPVGIENQLLTLQQRSECEIKKIEEPTMLGFHTASGKKVKIAKESLDKVKNLFDETKQDSSETTNSSHQGVKTQKDREVCKEELELTFETVEITASKHEEIRNFLEEKKLVSKEITMPPRLLRHHLHRQTENLSMSNSIPLKGKVHENMEEETSCHTDQSTCSAIENSALTFYTGHGRKISVNQASVFEAKKWLREGELDDQPENVDSAKEYARDYVGNPLCGSSSNSIITENDKNLPEKQNSTYLSNSVSNNYSYHSDFCHSNEVLSKSESLSENKIGNSDTEPAVKNVKDRKDTCFSEEISTVREANTHPQAVDEDSWVRKLVINSTPCKNKNTPGEVSRSNSNNFEKEPPAFSTSGNIAFVSHETDVRERFADNNRKAIKQNTESMSGSCQMKIMTGAHKALGDSEDVIFPNSPDSEEHITRSQEVFPEIQSEQILQHDPSVSGLEKVSEMPPCHINLKTFDIHKFDMKRHPMSVSSMNDCGVFSTASGKSVQVSDTALQKARQVFSKTEDVAKPFFSRAVKSDEEHSDKYTREENAMMHPPPNFLSTAFSGFSTASGKQVPVSESALCKVKGMFEEFDLMGTECRLQHSPTSRQDVSKILPLSEIDERTPEHSVSSQTEKAYNEQFKLPDSCNTESSSSENNHSVKVSPDLSRFKQDKQLVSGAKVSLVENIHHLGKEQALPKNITMEIGKTETFPNLPLKTNTEICSTKSKDPENSFETEAVEIARAFMEDGELTDSELPSHAKHSLSRQKNEETVLLTLGIGKRRGDALATVGEPPIKRNLLNEFDRIIENQEKFLKASKSTPDGTMKDRRLFMHHISLEPVTCGPACTTTERPKVRNPHFTAPGQGFLAESRLDEHLTLEKASSNLSVSGQPLCKAPAPRNEKRRHSLSTGKPMKVFVPPFKTKSHVHRDEQCVTGNTELEENKQKQKNVDEHGFGNSENNVNSGEIPQTTTVIFTKNEEEPLGIV</mol_seq> | |
668 </sequence> | |
669 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sus_scrofa</property> | |
670 </clade> | 884 </clade> |
671 </clade> | 885 </clade> |
672 </clade> | 886 </clade> |
673 </clade> | 887 </clade> |
888 <clade branch_length="0.068713"> | |
889 <name>ENSTSYG00000000478</name> | |
890 <taxonomy> | |
891 <id>9478</id> | |
892 <scientific_name>Tarsius syrichta</scientific_name> | |
893 <common_name>Tarsier</common_name> | |
894 </taxonomy> | |
895 <sequence> | |
896 <accession source="Ensembl">ENSTSYP00000000441</accession> | |
897 <name>BRCA2-201</name> | |
898 <location>GeneScaffold_7779:11488-76077</location> | |
899 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPLYNSEPTEEPEYKISSYEPNLFKTPQRKPSFHQLASTPIIFKEQGLTLPLYQSPVKELSKYSLELGRNIANSKHKSHHTVKIKRDEADDVTSPLLNSCLRESSDVLQCTHVSSQKDKSVVCGSLFHTPKFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPTLSSTVLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKMLGNSFGKVNSCKDHFGESMPSVLEDEVHETVVDTSEEDSFLLCFPKCRTGNLQKNRTEKTRKTNLYEAKTEECEEVKKQMEEQHLLGSEMELNVSDPLDSVIADQKPFGNGSGRISKEFVPSSACEWSQLTLSGLNGTQVEKIPLLCSSCDQNNSEKDLIHTEKECIDFITSENSLPHISSLPQSEKKLSKETVVNKRDEEQHIETHEDSILAVKRAGSGTSPTAFPYQGIKKSIFRIRESPEETFSTIFSGNMSNRCFKEGTEASESELEIHSVCSQKEDSLCTCPVDNGIWPTTIIHSCVTSKNTGLISTLKKKTNKFIYAISGEASYQKKIQKDQKSDTDRSSQLAASTFNASLXXXXXXXXLLHSSVKRNSLQNDSEEPTLSLTNSFGTISRKCPNKETSSNNTVISQDLDYKEAKINKEKLHSFIIPEPDYLLCFQEGKCENNPKSRKIFDTKEKNLAATGHPAVQHAKVDCSGIFRSQESLLYDHDSASTLILTPTSKNSSSNLVVISKGKESFKMSDKLQCKNCETDFELTKNIPMEKNQEIPALSEHSKNVELLPPRKHLTVQVNQNTNLTITQKEQQTTLISKITVNSNSEELFSDNENNFVFQVTNERGNPVLENTKELHEVDLSCVKEPILENSTMVAFAGINDKQTAQVSIKKDLDSSDIDYGFIEDRNSVKQHLKLTRGQDLESEISLDINKISNKNNDYMDKWAELLDPISNHSFGGSFRTASNKEIKLSECNIKSKILFDIEEQYPTSLACVEIVIVELDSQKKLSKTHAFVSQSVNTVSVHAQSSTIVSDCKNGHPTPQMLFLKGDFNSNHNLTPSQKAEITELSSILEESGSQFEFTQFRKPSHIILNNTFEALENQMTDLNTTSEKWKDVDLHRTINAPSISQVHSSRKFEGAVGVKQKFACLLENNCNKSASGYSTDENEVEFRGFYSARGKKLNVSNEALQKAVELFSDIENINEKTFTEVDPRSSSSGKYHDSIVSMFKIENHNNDRNFDEKNNKCQLTSPNNTEVTTGTSIKENIENYKRNTENENNKHTASDRRNTCNSGESNVSDSSRNETVYIHKDENDLPCTDQHNISLKLSSHFMKKGNIQIKEHLSDLTCLEVVKAEETCQVNTSNKEQLTTCKMEQNIKDFETFDISFHTASGKKIRVFKESLNRVVSFFDEKPEEELNNFSLNSKLLSGIKKNKVDILSHEETDLAKNKILKESIPVGTGNQFGTLQQQPDCDLGKVKEATLWSFHTASGRKVKITKESLYKVKNLFDEKQDISEIISFSHQEAKTLNDRQDCKEELKLACETSEVTTVPKCEEIQNSLDDGRNLVSNETAVLPRLLSDNLRRQSENLKASNSKSLKVKVHENVEKETARSPTPCYTDQSPYSAIENSALGFHTGHGRKISVSQASLLKAKKWLREGELDDQPEKINTAGYIENPPCENNLSSSMTENDKNHLSEKQNSTYLSNSSLSNSNSYLSDFCYSEEIYNDSGYLSKNKMDSGFELVVKNVEAKRNSSCPEVMSTMREANMNPKTVNEDTCVQNLVTNSLPCKNKNATIKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPIKRNLLNEFDRIIENQEKSLQASKSTPDGTIKDRRLFMHHISLEAVTCGPSCTTNKRQEKQNPNFTAPGQEFLSKSHFYEHRTLEKSSSNVSVSGQPFFKVPGTRNEKMAPSITAGKLTKVFVPPFKTKSHFHRDEEGTNLEENKQKQDIDKYGSGDSDNNINDSEIHPSNTNNSNQAANVIFTKCEEEPLDLTTSLQTARDIQDMRIKKKQRQRVFPLPGSLYLAKTSTLPRISLKAAVGGQVPSACSHNQLYMYGISKHCVKINSKNAESFRFHTQDYFGKESLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAKKIMERDDTAKTLLCVSDVISSINVSETSDSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTPLEAPESLMLKISANSTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTKRHIPSRALTRQQVRALQDGAELYEAVKNAPDPGYLEGYFSEEQLRALNNHMQMLNDKKQAQIQSEFRKAVESAEQGERSLSRDVTAVWKLRIASYANREKDSVILSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKSERAGIQLAATKKTQYQQLPASDELLFHVYQPREPLHFSRLLDPDFQPPCSEVDLIGFVVSIVKKTGLAPLVYLSDECQNLLAVKFWTDLNEDIIKPHMLIAASNLQWRPESKSRIPTLFAGDFSVLSASPKESHFQDTFNKMKNTIENIDIFCSEAENKLMHMLNVNDPRWSTPIKGCTSELHTAQTVLVTGNKLLMSSPNNEINHQNLLSLSTPKGKFVSIPVSVQMTSKSCCKGEKEVDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCDSKYEIPLKKALSSPQMTPLKKFNKLSLLESNSIADEELALINTQALLSGSTGGNQLVSISEASRTAPTNAKDDLGLKRHCVASLIKEQNDSQAGTEERESNGQDTRTEKHI</mol_seq> | |
900 </sequence> | |
901 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tarsius_syrichta</property> | |
902 </clade> | |
674 </clade> | 903 </clade> |
675 </clade> | 904 </clade> |
676 </clade> | 905 </clade> |
677 <clade branch_length="0.016812"> | 906 <clade branch_length="0.00509"> |
678 <confidence type="bootstrap">20</confidence> | 907 <confidence type="bootstrap">10</confidence> |
679 <taxonomy> | 908 <taxonomy> |
680 <id>9362</id> | 909 <scientific_name>Glires</scientific_name> |
681 <scientific_name>Insectivora</scientific_name> | 910 <id>314147</id> |
911 <common_name>Rodents and Rabbits</common_name> | |
682 </taxonomy> | 912 </taxonomy> |
683 <clade branch_length="0.120512"> | 913 <clade branch_length="0.012167"> |
684 <name>ENSEEUG00000009739</name> | 914 <confidence type="bootstrap">5</confidence> |
685 <taxonomy> | 915 <taxonomy> |
686 <id>9365</id> | 916 <scientific_name>Rodentia</scientific_name> |
687 <scientific_name>Erinaceus europaeus</scientific_name> | 917 <id>9989</id> |
918 <common_name>Rodents</common_name> | |
688 </taxonomy> | 919 </taxonomy> |
689 <sequence> | 920 <clade branch_length="0.137504"> |
690 <accession source="Ensembl">ENSEEUP00000008968</accession> | 921 <name>ENSCPOG00000005153</name> |
691 <name>BRCA2-201</name> | |
692 <location>GeneScaffold_4361:961-62824</location> | |
693 <mol_seq is_aligned="0">MPVGCKERPTFFEIFKRRCNEADLGPISLNWFKELSSEAQPYNFEPAEESEYKAVSYEPTLFKTPQRKPQMVSTPVIFKEQNQPLCTSPSKELDKYRLNLGKDITNSKHKSYCTTKTKMDQACEIASPSLNSYLSESPVLRYTHGTPQREKSMICGSLFHTPRFMKGQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLIERDEEASAAVYPNDTTAILKSCFFNYDESLQKNGRFVHSGLENESKNLGESESHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLHSSVNNSEETTLFSANSLGMNLRKCSSNKTFSGNKIVSQDLDSKGEKIKKEKLHSYIATATDVSNLQQRHCADNPKNRVSDAEEKVLPSASHPAMPHSKVEYKDDHFQSQERLLYDHGSFSTLVPTAMVPPSSPAVNFRANESYKISKKLQNKEREAGVEVTTNTPMKKNEKKCVLNENFKKAEQLPPEQYRPLSPSVKVQVTQSSSLTLIQNDQEETLISNVIVNSNPEELFPESENSFHITGERSVPVLENIEELYVADLSSIKEPISENDTMVAFTDIVNKQEAKVLITKDFESSDVVHDVTEKRNSVKQKLNMTTSQDSKLDIFLDTNVNSDGSSEHMDRQTGLSNVISNHSFGNGFRTASNKKIKLSENNIKKSKMLFKDIEEQYPPNLACTEIVNNLGIQEKLSKPHGLDSQSTNTVSGCVQNGILVSTSENTHAVPPILSLKQDPNLNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHTQRNNQFEKPEKQMTVVNTSSEEWKDTGHLTVNAPSTNQVNSKKLESAAEGKQMFPCLLKTSYNKSPNSNYSTDKNKTEFRGFYSALGTKLNVSTTALQKAMKLFSDIDNISEEASAELDPGILFSDKYKDSVVSASKIENYNDENLNKQLTFQNSTGMTTGIFAIDNTDRCKRDKESEDNKHTCASRNICNIGEPDGNDSSTNDRVYIHKGENDLPHSDQHNAVLKLPSLLMMEDNTQIEGLSDLTCLEVVKAEETFCVNSSNKEQLTSKMGQNTKDPGIFHLSFHTASGKNIRVSKESLSKVVHFFDEKYTEEELNSFSENMDADFISDINMNKTDILSHVETDMVKDKILIGHDPNNTKNHLLTLQQQPECEKRMINEPTILGFHTASGKEVKVAKDSSEKVKNLFDEKKKGSTSEISNIKCPAAAAVGERDDCKERLELACEAAGITVTKYKHVQKSLEEKKVISHEISDNLHTQAENLRTPNNISPKVKQCETIEMDTVRTSTCSTIENSTIAFYTGHGRKISVTQVSLLKAKKWLHEGESNDEPEEENAVNYVGNPLSRNSSKSILTENQLSEKQDSTYLSNRKMYNRYLYHSDFCHSNEAHSKSEYLSENEIGNSDIEPVLENVKARENSSSSEIITVREGSTYPQTVNEDMCVLKLNSSSPCINKSTANQLTVSDLKTFEIGPPSGKTDFAAHEKERLTDSCSKVINQNIDNKPGSYQTNFVADYHKALGDVNDISPKECSVHSLKVFADSQDKQVLQHNQSMPELEKVPEIPPCKFNLKLYMCKFNMVKFSKSVSSTNTGGIFSTASGKSVQVSDAALQKARKVFSKLEEDSADQLLSKESLKNSEHSDNLTRDKSTVVHTPQSKSSTICGFSTASGKQVSISKSALNKVKGMLEEFDLIGAECSLRHSPTSGQDILKISLSCNDKSTPEHSVNSKTEKACNKEFKLSSNCNIRSDSSEDTHFTDVSPYLSPFKQDKQQLELGTTISVIEKNSHPLEKEQALPQNTKIELSKTETYLPQKANTEVCSAYSKDPENYFETEAVEIAKAFMEDGELTDSELLSHDKHSSFTCNEHEEAGTQNSGSGKRKRDALVSVGEPPIKRNLLNEFDRIIENERKSLKASKSTPQXXXXXXXXXXXXXXXXXXXXXXXXTPDGEKQSPNFTAPTQEFPSKSHFCELLTVEKSSSNLGISEQPFHNAPARNERRHSITTSKLMKVFVPPFKTKAHFHRTEESDLEENKNEPKSTNEHRSGDSENNINESEIHQLNKNDSSQTTTLIFTKCEEPLDLITALENARDMQDIRIKEKQKQHIYPQPGSLYLTKTSTMPRISLKTAVGGQVPSVHSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVNPNLISRLWVYNHYRWIIWKLAALEFAFPKEFANRCLTPERVLLQLKYRYDVEIDKSRRSAIRKIMERDDTAAKTLVLCVSQIISSSTNISETSSSKTSSIGAKNVTTIELTDGWYAIKAQLDLPLLALIKNGRLTVGQKIIVHGAELVGSPDACTPLEAPDSLMLKISANSTRPACWYAKLGFFLDPRPFPLPMYSLFSDGGNVGCVDVIIQRVYPIQWVEKTSSGLYIFRSEREEEKEAAKFAEAQQKKLEAIFTKIQAEFEAHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSEEQFRALNNHRQMLNDKKYTQMQLEFRKAMESAEQDKQILSRDVKMVWKLRIVTYGKKEDSVILSIWHPLSDLYSSLTEGKRYRIYYLATSHSKSKSERASVQLTATKKTQYQQLPASDEFLFQVYQPRESLHFNKLLDPDFQPPCSEVDLVGFVVSIVKKKGLAPLIYLSDECHNLLAIKFWIDLNEDIIKPHTLITASNLQWRAEAPSRMPTLLAGDFSIFSASPKEGHFQEAFHKMNTIEDIDTFCSEAENKLMYILNANDLKWSTPTKDYTSERHTTQTILDTGNKFLLSPANSGMNHQSPLPLCKSKGKSVSIPMSAQRTPQKETDDPKHCRKRKALDFLSRLPLPPPVSPVCTFVSPAAQKAFQPPRRCGTKYEMPVRKKESNSLQVNPLKNLNISLSESDSIADEELALINTQALLSDSGGENQLLSISERTKTIATSSKGNRLKRHYTSPVSKKQENSQASEEEQKTSVQDTSIKKHI</mol_seq> | |
694 </sequence> | |
695 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">erinaceus_europaeus</property> | |
696 </clade> | |
697 <clade branch_length="0.129791"> | |
698 <name>ENSSARG00000002755</name> | |
699 <taxonomy> | |
700 <id>42254</id> | |
701 <scientific_name>Sorex araneus</scientific_name> | |
702 </taxonomy> | |
703 <sequence> | |
704 <accession source="Ensembl">ENSSARP00000002541</accession> | |
705 <name>BRCA2-201</name> | |
706 <location>GeneScaffold_591:245736-329655</location> | |
707 <mol_seq is_aligned="0">MPVGCKERPSFWEIFQTRCNQADLGPISLNWFEELSLEAPPYNSEIIFPVEESEYKTNSHEPSLFKTPQRKPYQLASTPIIFKEQGLNLPLNQSPSRELHKYRLLLGKDNKHQGYCTVKTKLNHTNEVTSPLPNTCLNESPVGLHCTHVTPQREKSVVCGSLFHTPKLIKGQTPRRISESLGAEVDSDMSWSSSLATPPTLSSTVLIVKEEESRTAVFPNDTAAVLKSYFSNYDECLRKNNRIISSGPINESSQKETTSQELGEIQDNSSWKVNNHKDQFGKSVPNVLKDEIHETVSDVSEEDSFSLYVSKYKTRNLRKIKIGKSRKNIFSESNMNEYEEPKQQLEKNKHLFVSEVEPNYNIPSNTSVTTQKLFGNGSDEISKETVLSSGSQRVQLTPSGENGIQMKKMPTLYTSSCGQSNSAKDCIDTEKDCTSFIILENLLPEILDTSKTENVVDEETVVNKGDVGHCLISHEDSTPVTKPTVANTSLVESPHEGIKKSVFRIRESTEEPLSEVFSNNITDPNFKEETKDSEKELEVNAICLQKEDSLCPNLVDNGSQPASIEHTSAALKSEGLISTLKKKKKKFIYAINDETTCQGEKLLKDRASQLSNYSTQFEANTFEVPLTVTNTDSGLMPFSSKKITEEPAFSLNSSYEVNLRKCSSNESSSSKTKRLPQVLDDKKLQSCIITEAAYFSSLQEQHCMDNPKSHSVSDIKEDFPITYHPGAPNSEVDCSSMLFPSQERFLYDHGNTSILTPNPRAIPSKPAMVSIVKKSNKMPEKLKSKNCEADFELTNNIPMEMSRLCVFSENSQKTELLISKNDITASSIEIQVNENPDSTVIQKDQEETTLISNITINSNSEELFPEYGNNFVFQMTNERKIPALENIEEPYEADLSCVEESILKNSTLIAYGDLDDKQTAKVLIAEDFSSSVIHDFTENINSIKQQVSRTLGQDSESDILNIEVKSNRNNEYVDKQTVSSAPVLDQNFGKGFRTASNKEIKLSEHNVQKSKMLFRDIEEQYPTSFACAEITNTLSSDVEKKQSKPLVLDSQSNNNVSRYVQNSAFASSSKNSHKIPPVLSLKLCLSSNNNLTPSQKAEVNELSTILEESGSQFEFTQFRDPDHIEQNYPLEASENHMILSSTTCEECKDSHHDALNSPSTSQVNSKKYKDTFGDKQNFAHLLKTSCTKNASGCLTDKEVEFKGFYSALGSKLTVSNKALQKAMKLFSDIEKISEETSAELDSESLFSSKYGSIRTENYTSDNINTENKCQLILQNNVEMTTDIFVENTKDYKREKENEDRYIGASINICNIGKSHCSDTSKNDTDSNKNDFPCNNQRNKCLKLSGPCMKEGSIQIKEGLSDLTCLEVVKTEELFYINTSSKEQLTVKKMVPNTKDFYSCDVYFQTASGKNITVSKESLSKVVNLFDEKCTEEESDNLPSSLNSELFSTKHMKKSISSHEETAKIEDKILKEKEPVGNKNQLTLQEQAERETEKSKEPFILGFHTASGKKVKVAKESLDKVKNLFDEEKQCIGEIINTNHEGLKTLKDREEPEVTCETIEIIVPKCEEREKSPEEKRLIPNETAVPPGLLSDHLHTQRENLKISNSISLKVKAHEDTEKQQAEVPITCSTNQSTCSVTGNSTLAFYTGHGRKISVSQASLFEAKKCLREGKLDDQPEAINAAGYVGSPLSENSSSCILTGKSHLSGRKDSAYLSKRSMSNSSSYSESSHSNEVYSKSELLSKNKVDHSGIEPVMKDAKDEKDSSFPEVVSTLREANIYPQTVNGDIYAKKLSNCSPCNNKDAANKLAFSDYFETESPSADGEKDFVSHDTEEIRERLVDSYSKVIKQNSASTSGTCQTKIVAGCHEVLDDLKDPLFSKSLDEECNMHSHKVFTDDQSEQSLQQNQNKSELEKVSKKSPCQLNWKTSDICKLNVGNFSSSVSFKNACGIFSTASGKAVQVSDASLQKARQVFSKVEDNADQPFSEVFKNNREHSDKYTKEKSTVIHSASKSLPAFSGFSTASGRKVSISESALNKVKGMLEEFDSIRTECGLQHSPPSRPDASEILPFSYVAKNTSEDLVNTTMESAYRNKFNHSDNYSIESDSSENSHLTTVLPSLSEFKQDKQQLILGIKASVVENIHCLGEKAIPESTERKIDKTETFSNLPVKTTTELRSTYSGDPGNYLETEAVAIADAFMEDGELTDSELLCHAKHEETISLNSSIGKRRGDASVSVGEPPIKRNLLNEFDRVMEKQEKSLKALKSTPEGTMKDRRLCMHHVSLEPITCGPPCATKKLQEKQSPNFTAPGQEFMSKSQFYEFNLTLEKSSNLSVSEKLFYEVPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYMFGISKHCLKINIKNAESFQFHIQDYFGKKDLWAEKGIQLADGGYLIPSNDGKAGKEEFYRALCDTPGVDPKLISRLWVYNHYKWIIWKLAAMEFAFPEEFANRCLSPERVLLQLKYRYDMEIDRNRRSAIKKIMEKDDTAAKTLILCVSGITSSGTNIPEASTSKNNSVDTKTVTLIELTDGWYAIKAQLDPPLLALLKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARKRCIPSHALTRQQIHALQDGAELYEAVKNAPDPGDLEGYFTEEQLKALNNHRQILNDKKQAQIQLEFKKAMESTEQEEQILSRDVKTVWKLRIISYEKKEKDSVLLSIWRPSSDLYSLLTEGKRYRIYQLITSKSKSKSERTKMQLTATKKTQYQQLMTSDELLFQVYQPRTSVPFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLLPLVYLSDECHNLLAVKFWIDVNEDIIKPRMLIAASNLQWRPESKSRIPTLFAGDFSMFSANPREEHFQETFHKVKNSVENIDVFCSDAENKLMHMLNADDPKWSTPTKDYTSEPHTVQPVLDTGSKCLMSPISYQSPLLLCKTKGKSVSTPVSAQMTSKFCCQKETDDPKTCKKRRALDFLSRLPLPPPVSPMCTFVSPAAQKAFQPPRRCGIKLNETPIKKLSLNSPQMTPLKKFNDSSFLESDSIADEELALINTQALVSGPAENQLMSTKSARTAPSCSKESLRLKRHHTATAVKDQEDSCDSMEERDISAKKYF</mol_seq> | |
708 </sequence> | |
709 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sorex_araneus</property> | |
710 </clade> | |
711 </clade> | |
712 </clade> | |
713 <clade branch_length="0.008989"> | |
714 <confidence type="bootstrap">2</confidence> | |
715 <taxonomy> | |
716 <id>314146</id> | |
717 <scientific_name>Euarchontoglires</scientific_name> | |
718 </taxonomy> | |
719 <clade branch_length="0.004454"> | |
720 <confidence type="bootstrap">8</confidence> | |
721 <taxonomy> | |
722 <id>314147</id> | |
723 <scientific_name>Glires</scientific_name> | |
724 </taxonomy> | |
725 <clade branch_length="0.05329"> | |
726 <confidence type="bootstrap">100</confidence> | |
727 <taxonomy> | |
728 <id>9975</id> | |
729 <scientific_name>Lagomorpha</scientific_name> | |
730 </taxonomy> | |
731 <clade branch_length="0.050845"> | |
732 <name>ENSOCUG00000016878</name> | |
733 <taxonomy> | 922 <taxonomy> |
734 <id>9986</id> | 923 <id>10141</id> |
735 <scientific_name>Oryctolagus cuniculus</scientific_name> | 924 <scientific_name>Cavia porcellus</scientific_name> |
925 <common_name>Guinea Pig</common_name> | |
736 </taxonomy> | 926 </taxonomy> |
737 <sequence> | 927 <sequence> |
738 <accession source="Ensembl">ENSOCUP00000014514</accession> | 928 <accession source="Ensembl">ENSCPOP00000004635</accession> |
739 <name>BRCA2-201</name> | 929 <name>BRCA2-201</name> |
740 <location>GL018702:3042658-3113023</location> | 930 <location>scaffold_6:33778275-33853154</location> |
741 <mol_seq is_aligned="0">MPIGSKERPTLFDIFKMRCNTTVDLGPISLNWFEELSSEAPLYNSEPAEESECKINNCEPNLFKTPQRKLSYHQLASTPIIFKDQGPSLQLYQSPLKELDKYRSDSGKDTANNARKSCCTMKSKIDQANDVASPLINSYLSESPVLQYTNVTPQRKKSVVCGSLFHTPKLMKGQTQKHISESLGAEMDSDMSWSSSLATPPTLSSTVLIVRDEEASETVDTNAILKNHFSNDESMNKNGRFIPSVTESENKNQREARSQRLRKVLGNSFGKVNSCKDHFGKSMPNVLEDEVCESVANISEEDSFSFCFSEYKMENLKELKSEKTTEKNIYETKTDTYDEAEEQMKENKHSFAFEIEAKNSDPLDSNLTIQKPLESGNDKVSKELVQSEWSQLSVSGLNEIQIEKISMVHVSSCDQHNSEKDLIDTEKSCINFITPENSLSHISGLPKLEKILNEETVVHKRDERQHVESHDSILGAKPTTSEISPVVSPFQGIKKSLFKIRESAEETLGTVFLGDMSNSDLNETAEIPEREMETHAFYSQKENSLCESFVDDGSRPATVTHSSVTLKNASLISTLKKKTKKFIYAVKDEGKKIQEDQNSELTNCSAQFEANTLDVPLVFTNADSGLLHSSVRRNCLQVDSEEQTLSKTNSFGTILRKYSNDENSSNNAVTSQDLNYKEAKLNKEKLPSLITPETDYLSCLQERQREDNLKGQQVSNIRAKIVSSAYHPAIQHLEMECNSTYSQSQNGFLDNHDNTNTCILTPSSKDLASNSAVISGEKESYKMSEETKYRNCESDVELTKNSPIEKNQEMWGLSENFKKAELLPLEKHVIITSPPMKVQFNKITNLTVIQQDQEETTLISEITVNSNSEELFPDNENSFVFQRTNERNNPVSGNTEERNEIDLNYMEESNLQNSTMVVHEDIDDKQTTQVLIAKDSDSSNMVHDLIEENRNTVTQHLKMTLGQDLKSGIPLDIHMKSNGNNDYMDRWSGLLDPISNHSFGGSFRTASNKEIKLSEHKINKSKMLFKDIEEQYPTSLACVETLNTVSLDNQKKLRKPDIFDSQSNNAISAYMQNSAFVSDCENNHTATQVLSLKQDLNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHITQGDTFEVPENQMTILNTTSEECKDGNHHLSINVSSLGQVERSKKFEDAVGTEHKFACSLKNNCNKSATYLTDENEVVFRGFYSALGTRLNVSSEALQKAVKLFSDIESISQETSAEVYPRSFPSDKCHDSIASVIKVENHNNDQNLSEKNNKCQLISQNDSEVTPDVFGNENTENYKRNTEDEDNDRNKLRESDVSDSRKNYTVDIHTNENDLQCINQHAQFVKEENTQIKESLSDLTCLEVVKAEEIRHINTSNEEELTTDTTEQNVKAVGIFDISFQTAAGRNIKVSKESLNKVVNFFDKETEEELNNFSNCLKSKLLCDMNKNKVDFSSHEEPDIVKNKIFKESIPVSTENQLLIVQQQPECGIEKIKEPTLLGFHTASGKKVKITKESFDKVKNLFDEKQDSEIASFIHQGANTLKDMENCKEGLELALDAIEITVPKCEEIQNYLDCNDKNFAFSDTRLLPRLSDNLHRQTKSLRTNSISLKIKIHENTEKEALGNATGCFPNQSLTIENSDLAFYTGHGKEVSVSQASLFEAKKWLREGELEDQSEKNAAKKYPDSYVGNPSYENSSNSIITQSDKNPLSGKQDSPYLSNSVSNSYSCHSDEIHNHSEYPSKNKIASGLEPLVKNVDQNTKVIPSVREEATCPQTINEDTCDPKCVTDSSSCRNKEKAIRLTVSHSDNSKVGPPIFSTASGKTVCVSHEAIKKVKEILIDDYSEVIKPNTESKSDTSQTKTLTLLEDSKDIFPNSIENGGYNMYSHKVFADIENEQILQHNQSMSGLEKVSDMSPCHVSLKTSDVCNFNLGEHPQSVSYTNSGVFSTASGKSVHVSDASLQKAKEMFSETEDSAEQLFSKVSFKSKECSDQFTREENSMTDIPKNLLSSQKDFSNNVINSFAFSGFSTASGKQVSISESALQKVKGMLEEFDLIRTECSLQDSPTCKQSVSKVTPPPCVDKRTPEYSVNFKRGNTCSEKFELSGNSNSKSGSSENQCIKVSPYISEFKENEQQLVLGTRVPLVENTCPLRKKRASPKNVKMETGKTEIFSSPVRTNREVCFAYSKDPEKYFETEAVEIAKAFMEDGELTDSEALNCDKRSRFTYQKSEGMILLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIENQDKSLKASKSTPDGTMKDRRLFMHQISLEPITCGPFRTTKERQEMQHPHVTVPGQEFLSKSHFYEHLTLKKSSSSSSVSEQPFSKVPTTTNEKMRHSVTADKATKVFIPPFKTKSHFHRDEQCVSMDNNSEENKQNQKNIGEHGSDDNENKINDSEIHEFNKNNSKLAAAIIFAKYEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKTAVGSQIPSACSHKQLYMYGVSKHCIKINSKNAESFQFHAQDYFGKEDLWARKGIRLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISGVWVYNHYRWIIWKLAAMEFAFPKEFANRCLTPERVLLQLKYRYDIEIDRCRRSAIKKIMERDDTAAKTLVLCVSDITSSNTDTSENSSSKTSCVENKKVAIIELTDGWYPIKAQLDPPLFALLKSGRLTVGQKIIVHGAELVGPPEACSPLEAPDSLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGSVGCADVIIQRTYPIQWMEKTSSGFYIFRNEREEEKEAAKHAEVQQKKLEALFTKIQAEFEEHEESTAKQCTPSRALTRQQIRALQDGAELYEAVKSALDPGCLESYFSEEQLKALNHHRQMLNDKKQAQIQLEFRKAMESAGQGDQGLSRDVTAVWKLRIISYEKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKYERANIQLASTKKTQYQQLLASDEILLQVYQPREPLHFSRLLDPDFQPPYSEVDLMGFVVSVVKKIGGCAPLVYLSDENHNLLAIKFWIDINEDIIKPHMLIAASNLQWRPESKSGIPTLFARDVSVFSASPKEGHFQETFNKMKNSVANIVMFCNEAEKKLMHILNVNIPKCSTPTKEYTSEPYAAQTMLGIGSKFLMSSPVSDIIYPSPSSLCTPKGKSIPTSVSAQMTSKSCCKGEKEADDPKTCKKRRALDFLGRLPLPPHVSPICTFVSPAAQKAFQPPRSCGTKYETPVKKKELSSPQMTPLKKFSETSLLESDSIADEELALINTQALWSGSAGESQLVSESTRTVPTGSKGNPGPKRPSATALNKEREDHQAGTEECETTRKDTRTVKSLS</mol_seq> | 931 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKRRCDKADLGPISLNWFEELSSEAPPFNSEPAEESEYKVNTYEPNPFKTPQRKPCYQLASTPIIFKEQGQTLPLYQSPLNELGTDIADTELKNCHTVKANVDRISDVTSPPLNSCFSESPLVLRCTQKTPQRKMPVICGSLFHTPRLVKGQTPKHIPESLGAEVDPDMSWSSSLATPPTLGSTVLLVRDEVSETIFPNDTTVILKHSLSSHDENLKKNDSFIPPVMENENKNQREASHSGLGEVVGNSFGKTCSSKDHFGKLMPNPLENEVHETVTDIFDEDSFSLCFPKYRTGNLQKTSKTRKKIFHEARTDDFKEQMKENKHSLTSEMEPNDGDPLDSDVASQKPLGPESDRISKEAAPSSSCEWSQLTFPGPNATQRKEMPVLPVSSYDQDNSGKDSIESEKESSNHNTSENSLPHTSSLSEKISNGEKPVDERDGRQHPESHEDSIRAVKGTVSWTSPVSPLFQGAKRPIFKIGEPSEDTFNTVLSDIVMKPNFKETETSKSGLEMYTDCSQKEDSLCLSSVDNRSLPAAIPHSSVTLKNTGLISSLKKKTKKFIYAINDKACYQRENLQENQKTELTSHSAQFEADTFKASLTFTNADAGLSHSSVKRNCFQNDPKESTFLTNSSGTSPRKHSNNESSYANKIISQDLNYNETKLNKEKSQSLTSPETDFLSCLQKRRWDDDPKSQKVSDIKENVLVVTCQPEARHSEAEHSGILFQSQKSFFDGHDNTSPLTLTPSSKDPLLNPVMISKGKKSYKISEKLKRENCETGIELAQNISIENNQEICVLNLNSKKTELLPPEKYVSAASPSVTMPFSHNTNLTATQEDQEETSLISEMPGNPNSEELFAGNKNNFVFQITDESSPVLGKTKEVHGSDCSFMKESILQNSAMVVDTDIDDKQVVQMPITEDFGPSNTIHDLKENRTDVKQHLASGQDLKSDLSLDRKPNRNDYTHKMTVILGPVSSHSFGGGFRTASNKEIKVSQHYIKKGKMLFKDIEEQYPTSSAPVEIVNALLNNEKKLNKPHAFDLQSVNTVSTYVQRSASISDHENHTASQRLSVKQDFNSNLNLTPSQKAEITELSSILEESGSQFEFTQLRKPNHLIKSNTLQVPGNQMTALSTTSKESKDVNLQAIIDASSICQVGSSKKFGGAAGEKQKSACLLKNNPNKSAAGFLTNENEVAYRGFYSGLGTKKLSVSSEAPQKPLKLFSDIENISEETSDKVDPSFSASKCYDSVASVFKIENHNNNKNVNVKNSCQAVLQSNAEMTTGNFAEENTENCMRNSENEDNKYIGTSTNNCKLGKPGGTDSSKNDTGYIQKDNDLPCKDQHNMHLKLSSQFMSEVSTELKETLSDLTCLEVVKAEETCYINSNEQLTTDEMEQYTNNFGISFQTASGKNISVTKESLNKAVNLFDQETEEWNDFSDSLNCKLLPGIKNKMDISSHEETNVMKNKILEKSTPAGTAAQLCVLQQPECKIENEPNLLGFYTASGKKVNIAKESLNKVKNLFDENRQDVSKITKWGHQVAKILSDRQDCEERLELARETVAITDIPQCEEMPSVSGGLHRQTKNLKASNSISLKVKVPENVEKGIANPPTTSCTDQFSYSAIKDLPVAFYTGHGKKIPVNPALLFKATKWLKDLNDEHEEDCVGNPSRYLSKNQVDSGTELVMNVKDKNNTDFSEVVPTIKVSTHPQAINEDVCVQQPVTISSPFKSKNPAVNVAVSDSGNYEVGPPAFSTASSKMVFVSQDSTEKQVFIENCNKTINQNTESKSDTCQRETVTGSKALDNSEDAIFPDSPDDEECVRSCKSFADTQSEESLQHNKSMSGLETIFERPSYVSLKAPDKCKFSDTEKLPKTMSSNIYGIFSTASGKSVQVSNGSLQKAKQMFSKTEDSAKQLFSKVFKSSEHSDQFTKEEITVMRTPSKHSARSTAFSGFSTASGKQVSVSESALHKVKGMLEEFDLIQTAYTLGHSTSSRQDVSKIPLCIDESTPQHSIDFKMQKNCNNEYKVSSNYNTESSSSEGNHSVTLSPCLSQFKQDKQHLVLGTRGSLFENAHILREEQAFPQNSMEISKTETFSNDSVRTSAEVCSPNPEEPETYFETEAVEIAKAFMEDDELTDSEPPGHPGHSLSTCQKKEGVLLNSRAGKRRGGALVSVGESQIKRSLLNEFDRIKENEEKSLKASKCTPDGTVKDRKRFTHHISLEPVTCGPSCTTSNRQEIQNLNCTAPDQEFLSTSHLYEHLTLEKSSTSLPVSRQPFYKVPAVRSENTRYSTTASKPVKVFVPPFKTKSHFHRDECFVSRDINLEENKQKQQNIDDCGSDDSENNVDGSEIHQFNKNCSNQGTVKIFPKCKEEPLADLMTSLQNARKIQDIRIKEKEKQHIFPQPGSLYLAKTSSLPRISLKAAVGGRVPSACSHKQLYMYGVSIHCMKINSKNAESFKFHIQDYFGKEDLQAGKGIQVADGGWLIPDNDGKAGKEEFYRALCDTPGVDPKLISRVWVCNHYRWIIWKLAAMEVAFPQEFASRCLNPERVLLQLKYRYDVEIDRSRRSAIKKILERDDIAAKTLVLCVSDIVSSNTNTSEGSGDKASADIKKAAVVELTDGWYAVRAQLDPPLTTLLKSGRLAVGQKVVTHGAELVGSPDACAPLEAPESLMLKISANSTRPARWDARLGFLPDPRPFPLCLSSLFSDGGAVGCADVVVQRVYPVQWVEKTSSGLYIFRNEREEEKEAAKHAEAQQKKLEALFSRIQAQFEEREANPAKRCTSSHALTRQQVRALQDGAELYEAVRSAPEPGYLEGCFSEEQLRALNKHRQMLDAKRQAQMQLEFRKAVEHAEQGERGLARDVAALWRLRVVSHERKEDCSVILSIWRPSSDLHSLLTEGKRYRIYHLAASKSKSKSERANIQLTTQYQQLTASDEILLQAYRPRQALCFSRLLEPDFQPPYSEVDLIGFVVSVVKKIGLAPLVYLTDECYNFLAVKFWIDLNEDIIRPHMLVAASNLQWRPESNSGIPTLFAGDFSVFSASPKEGHFQERFNKMKTVVENVDTFCNDAAEKLTHFLGVSDPKRAPPSTDCTSELHTAQTGLGTRNKCLMSSPSDEINYQSALSLCCPKGKSVSTPIAAQITSKSCAEQKAVNDPKNSKKRRALDFLSRVPLPPPVSPICTFVSPAAQKAFQPPRICDTKYETPKLDFPQMTPLKKASAVSLLESNSIADEELAMINTQALLSGSAGENQLPSARESRRTAPSSSGDYLGQKGHCAVPLVTGQENSQASTGECKSNLQDTSRIKNLSKRLQRRQKHK</mol_seq> |
742 </sequence> | 932 </sequence> |
743 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">oryctolagus_cuniculus</property> | 933 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">cavia_porcellus</property> |
744 </clade> | 934 </clade> |
745 <clade branch_length="0.126167"> | 935 <clade branch_length="0.000617"> |
746 <name>ENSOPRG00000015365</name> | 936 <confidence type="bootstrap">5</confidence> |
747 <taxonomy> | 937 <taxonomy> |
748 <id>9978</id> | 938 <scientific_name>Sciurognathi</scientific_name> |
749 <scientific_name>Ochotona princeps</scientific_name> | 939 <id>33553</id> |
940 <common_name>Squirrels and Old World rodents</common_name> | |
750 </taxonomy> | 941 </taxonomy> |
751 <sequence> | 942 <clade branch_length="0.014389"> |
752 <accession source="Ensembl">ENSOPRP00000014082</accession> | 943 <confidence type="bootstrap">48</confidence> |
753 <name>BRCA2-201</name> | |
754 <location>GeneScaffold_410:590036-664083</location> | |
755 <mol_seq is_aligned="0">MPTGTKERPTLFEIFKMRCNVTDLGPISLNWFEELSSEAPPYNSEPTEESGYKSSNYEPHLFKTPQRKLPYHQLASTPIIFKDRGLSLALYQSALQELSEYRSALGRILPSNEHKSCCKMKAKTERVNAINSPLLNPSESPVIQYTHVTPQRKKSVVCGSLFHTPKLLKGQTQKHISESLAAEVDSDMSWSSSLATPPTLASTVIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSFGEVNSCEDHFEKIPSVLDDEVCEAVTDVLEEDSFFSQHKMGSVQNKSEKTREEIFSEKETDKCDEAEKQTKGDKHSFPREMETKNCDPLDSNVTNQEPSESGNDEITKAFIPSESSQLSLSNLKELKMEKIPLAHVSSWDQSGLEEDPMDTESMQPLTPQDSSPPTSDLPKLETTLNEEPVVHNGDEAQHLGSPDSLLEVKPVISQICSVVSPFEGIKKSIFKITESPEETFDTFFSSDVTNSDFQEKTEISERGMGMHTSYSQKEKSLCQSLAASGSSPAAVTLSSANSKNSSLISTLKKKTKKFIYAVKNESYQGKRIQKDQNVELTNCSAHFEANALDPPLAFANADSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCNNITDLTVQKDQEETTLISEMANPKAEESFLDNENSFVFHVTNERNSLVWESSRELYEAALSPVKDSLLQTSNVVVCEGISDKQVAHASTTKDFDLSLMVHDLAEENKNHVKHHLKVTLGQDLKSDTSSDIYRKSNGNNDMDKWAGLSDPISNHSLGSSFRTASNKEIKLSEHKITKSKMLFKDIEEQYPMSLACVEIMNAMPSDNQKKLTNPDLFDSQPVTAISAYVQSSAFDSDCENNHRAPQVSSLRDDINNLTPSQKAEITELSAILEESGSQFEFTQFRKPSHIMEGNTLEVPGIQMTILNTTTDEREDAHLGCTVNASSSSHIDGNKKFEKAVGIQQNFGCSLKSCTSTNVADNEVEFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQGLREGELDQSEKNAANYIEKPSCENSSNSTVTESDKHHLSGKLDSVYLNNNVSHNSPCHSDNIHNDSGYLSKDKIDSGHEPAVKNVDPTTSGFSNVMSSVREENRCSETMKEDGCDLKCVTKSSPCRNKERATNLAVPHGRDFKVGPPAFSTASGKTVCVSHEAILKVKERFASDCSKMIKPNTGSKSDSSQTKIMAGYFKSSGNPKDDVIFPNPVSNNGKSVYSHKGFADLQNEQMLQYNQRLSALGQVSELSPCRVSMKTLDVCNFNEGMVPKPVFSANSGIFSTANGKPVHVSDAALQKAKQMFSETEGSAEQLFSKVSFKGKERSDQFTGDESAVTDGPENTLFQKDVPYNVINVSAFSGFSTASGKHVSVSESALQEVKGMLEEFDSIRAEHSLQDSPTYRQSVLKVTPPPCVTKRTPEHSVNSKRGSVCSKENESPSDCNNERCSSDYHCREVSPCISHFKKDKQLLLKNKIPLAENTCLLGKKQALPKRTNMETGKTETFSSDPVRTKKEICSAYSGNYSEMEAIEIAEAFMEDGELTDSEVSDFGKHSYQKNKGMAFFNSRMGKRRGDAFVSVGEPPMKRNLLNEFDRIVENEDKSLKPSKSTPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEKSSSSSISEQTFSEVPTTANEKMRHSVATDNPSKVFIPPFKVKSHFQKDEQCVGMDIHLEENKQNHKNISEHGPDDSETQIGAGETHEFNKSGSDQATTVIFTKCEEEPLDLIASFQHGRDMQDMRIRKKKRQRIFPQPGSLYLTKTSTLPKISLKTAVGGQIPSAYSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISREWVYHYRWIIWKAAMEFAFGFANRCLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISANSTRPASWHTKLGFFRDPRPFPPPLSSLFSDGGSVACVDVVIQRTYPVQWMEKTSSGLYVFRNEREEEKEAAKYAEVQQKKMEALLTKIQAEFEEHEESTTKQCVAARALTRQEVRALQDGAELYEAVESAADPRDLESYFSEEQIRALSRHRQILNDKKQAQIQLEFRKAMESAGQGECGLSRDVTAVWKLRIITYDKKEKNSVLLSIWRPSSDLYSLLTEGKRYKIYHLTASKSKSRYEKANVQLAATKKTQYQQLSASDEILLHVYQPRELLHFSRLLDPDFQPACSEVDLIGLVVSVVKKTGRAPLVYLSDEYHNLLAIKFWIDINEDVIKPCVLIAASNLQWQPESKPGIPTLFAREMSVFSASPKEAHFQETFNKMKNTIENIDIFCTEAEEKLVHILNVNDPKCSTPAKEPYAAQTVLSTRSKPL</mol_seq> | |
756 </sequence> | |
757 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ochotona_princeps</property> | |
758 </clade> | |
759 </clade> | |
760 <clade branch_length="0.012286"> | |
761 <confidence type="bootstrap">3</confidence> | |
762 <taxonomy> | |
763 <id>9989</id> | |
764 <scientific_name>Rodentia</scientific_name> | |
765 </taxonomy> | |
766 <clade branch_length="0.001026"> | |
767 <confidence type="bootstrap">4</confidence> | |
768 <taxonomy> | |
769 <id>33553</id> | |
770 <scientific_name>Sciurognathi</scientific_name> | |
771 </taxonomy> | |
772 <clade branch_length="0.081466"> | |
773 <name>ENSSTOG00000005517</name> | |
774 <taxonomy> | 944 <taxonomy> |
775 <id>43179</id> | 945 <scientific_name>Sciurognathi</scientific_name> |
776 <scientific_name>Ictidomys tridecemlineatus</scientific_name> | 946 <id>33553</id> |
947 <common_name>Squirrels and Old World rodents</common_name> | |
777 </taxonomy> | 948 </taxonomy> |
778 <sequence> | 949 <clade branch_length="0.117694"> |
779 <accession source="Ensembl">ENSSTOP00000004979</accession> | |
780 <name>BRCA2-201</name> | |
781 <location>JH393282.1:26945680-27015735</location> | |
782 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCSGADLGPISLNWFEELSSEASLYNSEPAEESEYKTHSYEPNLFKTPQRKLSYHQLASTPIIFKDQGQIQSPLQELGKYRSDLGKNITNSERKSRHTMKAKVGQENDVTSPPLNSCLSESPLALQCTRVTPQREKPVVCGSLFHTPKLVKGQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVKDEEAPETVFPNDTTTILKSYFFNHDESVMKNYRFSPSVSDNENKNERETSHHGLGKMLGNSFGKENSYKKHVGKSMPTALEDEVHEIVADISEEDSFSLHSSKYKTGILQRIRMGKTRKKIFSETRTDEFNEEAEKQMKENKHLFASVIEPSGSGPLDSNITNQKPIGNESDKISNEVVPSSGCEQSKLTFSGLNGTQMERIHLLHISYDQNNTEKDLKDTRKECSSCIISENPLPHTSSLPNSKKILNEKTLVDRRVEGQHLKSHEDSFLAATHAPSEISPVVSPFQGIKKSIFQTFCPSSVDNGSWPATISHTSKHTGLISTLKKKTKKFIYTINDETFHQGKEIQKDQKLELTYSAAQLEASAFEAPLTFTNPDSGLLHSSVKRNYLQNDAEEPTLSLINSSGTILRKCSNNQDSHVNTIVSQDLQEGEVHKEKPKSFIAPETDFLSCLQERQCEDNAESQKVSEKKEKVLVAACHPVVQHLEVESGGIHFPSQKVLLDDDNTNTLLLTPSSRDPGMISRGKESYKMSEKLKCKNCEGSIESSKNSPMEKCQEMCFLNENSKKPELLSKKYVTEVSPSMNMQFNQNINITVIQKGQEKTPLISEITVNPNSKELFPDIENNCVFQITSERNNRVLGNTKELHEADLSCVRKTFPKNSTMVVDTDMAEKQVAHVSVSDSIDSSGIVHDLTEENRNRVKQQLKIISGQDLKANTSLSLKSNRSKGFMDKWAGPLDPVSYHNVGGSFRTASNKEIKLSDHDIKKSKMLFKDIEEQYPASLGCIEIVNTLSFDNQKKLNKPCVSDSQSVNTVSAYVKSSTFLSDFENNHTTPQVLPLRGDFNSNHTLTPSQKAEIKELSTILEESGSQFEFTQFRKTSQIIQNNTFEVPRNQTGLKTSSEEWKDDVHQTIDTSSVAQVESSKKFEGAVGVKQKFAHLLKNNCNKSASNYLTDENKDFRGFYSARGTKLSISSEALQKAVKLFSDIENISEETKAEVDPGSFSSSKCPDSIVSIFKMESHSDDNNLNKKNNECQLTLQNKFEMATHILDEENTENYMKNTENEDNKCTNDNRNTCKLEESDQGDSSKNDTVSGHKDENDLPCTDQHNIDLKLPSQFVKEGSTQFKESLSDLTCLEVVKAEETCHVNFFNKEQLTADKMEQNIKDCGIFDISFQTASGKNINVSKESLNKVVNFFDQKTEELSNFSDSLNSKLLSGINKKKMDISRHGTIDMVKNKILKEGIPVDIDSQLLTLQQQPEYEIEKNKESNLLSFHTASGKKVQIAKESLDKVKNIFDEKKQDVSKITSFTQQGTKTLKDRKDCKGFELACEMITVPKCEEMQDSLINNEKKIVYNEPGVLPRLSDDLYGQTKHLDTLNISLKVKMHEHIEKETTNSPTACRTNQFSYSATGDSALAFYTGHGKKISVNQASLLEAKQWLRKEELDGQGERNTAKAESIKEYGGNPLYENSSDSIMTEKDKIHFSEKQDSAYLSNNSMSNSYSAFCHSSDVCDDSGYLSKNKSNSDIELVMKDKKNTSFRKADIYPQIVNEDTSVQKFVTNFSPCKSKDRTTNMAIPDFKSFEIGPPAFSTASGKIVCISRDAVRKVKKIFTEDHSNVIKENTENKSDICQGKIVKAYSEALDNLEDVIFPNSIGDEECMPSHKVFTDIQSEQIVQHNQKLSGLGKVSEISPCVNLETSDMCEFNRGELPKSFSSTNACGIFSTASGKSVQVSDTSLQKARQIFSEIEDNANQLFSKVSLKSNEEHSNPFTREKSTMAHAPPNVLSPGKSFLCNINSSFSGFSTASGKKVAVSESALHKVKGMLEEFDLMGTEQTLQYSPTSRQDISRMLPPPRIEKRIVEHSVSSKMEKAYNNEFNDNVENASSGNNHCVKVSPYVSQLKQGRQHLVLGTKLSLVENTHLLGKEQTLSKNIIEIGQTETFSSVSVKTNVEVCSTYSKDPENCFETEAVEIAKAFMEDGELTDSEPPTHAKHSFFMCQKNEEMILLNSRTGKRRGNALVSVGEPPIKRSLLNEFDRIIENEEKSLKTLKSTPDGTINDRRLFTHHISLEPIICGPVRTIKKQQETQKPNFTVPGQKFLSKSHLYEHLTSEKSSSNLPVSEQPLYKDPATRKEKMRYSITTGKSNKVFVPPFKTKSHLYRDEHCVSKNINLCENKQKQRNINECGSCNKENNINDSDIHQFDKNSTSQVTTTIVPNCEEESLDLIISLQNARDKQDMRIKKKQGQHIFPQPGSLYLAKTSTLPRISMKAAVGGQAPSACSHKQLYMYGVSKHCIKINSKNAGSFQFHTQDYFSKEDLWSGKGVQLADGGWLIPSNDGKTGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDRSRRSAIKKILERDDTAAKTLVLCVSDIISSITDISETSSSKTSGVDAKKVAIIELTDGWYAVKALLDPPLLALLKNGRLAVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVVVQRVYPMQWMEKTSSGLYIFRSEREEEKEAARHADAHQKKLETLFAKVQAEFEEHEEHTTKQCVPSRALTRQQVHALQDGAELYEAVKNAPDPDYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQEEQGLSRDVTAVWKLRIVSYRKKEKDSAMLSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERAHIQLSATKKTRYQQLPASDEVLLQVYHPREPLHFNRLLDPDFQPPYSEVDLIGFVVSVVKKIGLAPLVYLTDECHNLLAIKFWIDLNEDIIKPHVLIAASNLQWRPESKSGIPTLFAGDFSTFSGSPREGHFQQRLNKMKNTIENIDIFCNDVEKKLMHLLNANDPKCSTPNKEYTSEPHTTQTVLSTGNKFLMTSPNSEINYQSPLSLCTPKGKSVSTPVSTRMTSKSCSKGEKEIDDPKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGSKYETPIKKKELNSPQMTPLKKFNEISLLESDSIPDEELALINTQAILSGSARKSQLSLSDSMRTAPSGSRDSLRQKRHMTSLVRDEENSQNSTEECETSIQDTSAINLPKYL</mol_seq> | |
783 </sequence> | |
784 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ictidomys_tridecemlineatus</property> | |
785 </clade> | |
786 <clade branch_length="0.013586"> | |
787 <confidence type="bootstrap">44</confidence> | |
788 <taxonomy> | |
789 <id>33553</id> | |
790 <scientific_name>Sciurognathi</scientific_name> | |
791 </taxonomy> | |
792 <clade branch_length="0.117166"> | |
793 <name>ENSDORG00000007049</name> | 950 <name>ENSDORG00000007049</name> |
794 <taxonomy> | 951 <taxonomy> |
795 <id>10020</id> | 952 <id>10020</id> |
796 <scientific_name>Dipodomys ordii</scientific_name> | 953 <scientific_name>Dipodomys ordii</scientific_name> |
954 <common_name>Kangaroo rat</common_name> | |
797 </taxonomy> | 955 </taxonomy> |
798 <sequence> | 956 <sequence> |
799 <accession source="Ensembl">ENSDORP00000006609</accession> | 957 <accession source="Ensembl">ENSDORP00000006609</accession> |
800 <name>Brca2-201</name> | 958 <name>Brca2-201</name> |
801 <location>GeneScaffold_1038:358641-411759</location> | 959 <location>GeneScaffold_1038:358641-411759</location> |
802 <mol_seq is_aligned="0">MPIESPGRPTFFEIFKTQCSKADLGPISLNWFEELSSEAPPYNSEYADESEYKINSYEPNSFKTPQRKPFYQLASTPIAFKEQGQTLRVQPSPLKELGKYLDLGKDIANNEHKNCHTKVEHIIDVTSPSLNSCLTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKPKHISESLGVEVDPDMSWSSSLATPPTLSSTVLIVRDEETSGTIFPNDPTVILKNYFSKHKESLKKNYHFIPSVTNSENKNQREASSHGFGKVLENSFGKVNSDKDDFRTSMTDTQEDEVHETVADFSEEDSFSLCFSKKRTGNLHKTRLDKTRKKIFCETSTDEFSEKDKQVKEDKYSFASEVEPSDDDPLDTNLGNQNPFGHESNKASKEAVPSSDWEWSQLNLSGLNETQMEKMPLLPISSYDQGNSENNLIDTEKECMTSINTKNSLLPISSLPQSEEILQEETLIDKRDEEQQLESHEDSFLVAKQIVPGTSPTVSPFPSIKKSLFRIRQPSEETSDEVFSGNLTKTNFKEESGTFESGMEIRAICSQKADSLFPSSLDSEKHPATSTHTSVTLKIEGLISSLKKKKKKFIYAIDDETSCQVKKSQKLQKSEPTNHSSQCEAPLIFTDAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSPVLGTTEELYEADHSCVKEPIFKNCMMVIDTDIDDKQAAHVLITEGLIYDLTEENKNSAKQNLKRTLSQELKSNSFLDIKDIKSNRNNYYEDKLSGLLNPLTDHSFRGGFRTASNKEIKLSEHNIKKSKVLFKDIEEKYPTSLPCVEIANTNTLTLDHQKKLNKLNISNSKLVNTVSPSVQSGTFIPDCENNHTSPLKQDISANHNLTPSQRAEVTELSTILEESGSQFEFTQFRKLCHRAQNLTSEVPKNQMADSNHTSDLHLGQVDRSEKLKEVARIKQTSACLLKNYNKSTGESEKEFQGFYSALGTKLSISTEALQKALKLFSDIDIIHEETSVEAEPRFSSSNSHDSFVSAHKIESHTNNKNLHEKNSKCQLILQNNIEMTPGIICEENTENYMRNTGSKCNRCTDMSRSICKLQESDGTDSSRNDDKVYIHKDESNLQCTDRHNIYIKSASQFTKEGNIQTKECLSDLTCLEVMKAEETCLTNSSNKEQLTVGKKEQNVKDFDITSPTASGKNNRVPEESSNFFDKHMGEISNFSNSFNSELLSGIIKSKVDISCHGETDMTENKISEEGIPVGNRKQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKERQEMQNPNVTAPDKGFLSKPHLDKHLEKSSSNLPDSGQLVHKIPNTRNETMRQSVTIGKLAKVFVPPFKVKSHLHKDEHHVSKQTNFEEEKQKQRKIEECGSSDCENINSEIHQFSKDSSCQEATMIFTKCKEPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRAWAYNHYRWLIWKLAAMEFSFPKEFANRCLNPERVLLQLKYRYDMEIDRSKRSAIKKIMERDDTPAKTLVLCVSDIISSTSETCSNKTDGADTKNVAMLELTDGWYAVKAQLDPPLLALLKNGRLAVGQKIITHGAELIGSPDACAPLEAPDSLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCADVIVQRVYPIQWMEKTPSGLYIFRNEKEEEREAAKFAEAQQKKLEALFTKIQTEFEKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSEEQLRALNNHKQMLNDKKQAQIQLEFQKAMESAEKVEERLSRDVTPVWKLCIVSYGKKGRDAVTLSIWRPSSAVLSLLTEGNRYRIYHLATSKSKCKSERANIQLTATKRTQYQQLPASDEILFQVYQPREPLQFSRLLDPDFQSPCSEVDLIGFVVSVVKKIGLAPLVYLSDEYHNLLAIKFWIDLNEDVIKPHTLIAASNLQWRPESKSGIPTLFAGDHSMFSASPRENHFQERFHKMKNTVENIDVLCNDAKKKLMSLLNANYPKWSNPTKDYKSEPCPAYSALGVDNEVLSSPSSKQNYQSHLSLCTPKEKCLPNPVSAQMISESSHKEEKEIDDPTCKKRKALEFLTRLPLPPPVSPICTFVPAAQKAFQPPRSCGTKHRTTKRKELNFPPVTPFKKVNEISLLERDSIADEELALLNTQSLVSDSMGESHLLIRESKRTTPSSTQDHLGQKKQQESLMGGQGNPQAGTKECEK</mol_seq> | 960 <mol_seq is_aligned="0">MPIESPGRPTFFEIFKTQCSKADLGPISLNWFEELSSEAPPYNSEYADESEYKINSYEPNSFKTPQRKPFYQLASTPIAFKEQGQTLRVQPSPLKELGKYLDLGKDIANNEHKNCHTKVEHIIDVTSPSLNSCLTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKPKHISESLGVEVDPDMSWSSSLATPPTLSSTVLIVRDEETSGTIFPNDPTVILKNYFSKHKESLKKNYHFIPSVTNSENKNQREASSHGFGKVLENSFGKVNSDKDDFRTSMTDTQEDEVHETVADFSEEDSFSLCFSKKRTGNLHKTRLDKTRKKIFCETSTDEFSEKDKQVKEDKYSFASEVEPSDDDPLDTNLGNQNPFGHESNKASKEAVPSSDWEWSQLNLSGLNETQMEKMPLLPISSYDQGNSENNLIDTEKECMTSINTKNSLLPISSLPQSEEILQEETLIDKRDEEQQLESHEDSFLVAKQIVPGTSPTVSPFPSIKKSLFRIRQPSEETSDEVFSGNLTKTNFKEESGTFESGMEIRAICSQKADSLFPSSLDSEKHPATSTHTSVTLKIEGLISSLKKKKKKFIYAIDDETSCQVKKSQKLQKSEPTNHSSQCEAPLIFTDAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSPVLGTTEELYEADHSCVKEPIFKNCMMVIDTDIDDKQAAHVLITEGLIYDLTEENKNSAKQNLKRTLSQELKSNSFLDIKDIKSNRNNYYEDKLSGLLNPLTDHSFRGGFRTASNKEIKLSEHNIKKSKVLFKDIEEKYPTSLPCVEIANTNTLTLDHQKKLNKLNISNSKLVNTVSPSVQSGTFIPDCENNHTSPLKQDISANHNLTPSQRAEVTELSTILEESGSQFEFTQFRKLCHRAQNLTSEVPKNQMADSNHTSDLHLGQVDRSEKLKEVARIKQTSACLLKNYNKSTGESEKEFQGFYSALGTKLSISTEALQKALKLFSDIDIIHEETSVEAEPRFSSSNSHDSFVSAHKIESHTNNKNLHEKNSKCQLILQNNIEMTPGIICEENTENYMRNTGSKCNRCTDMSRSICKLQESDGTDSSRNDDKVYIHKDESNLQCTDRHNIYIKSASQFTKEGNIQTKECLSDLTCLEVMKAEETCLTNSSNKEQLTVGKKEQNVKDFDITSPTASGKNNRVPEESSNFFDKHMGEISNFSNSFNSELLSGIIKSKVDISCHGETDMTENKISEEGIPVGNRKQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKERQEMQNPNVTAPDKGFLSKPHLDKHLEKSSSNLPDSGQLVHKIPNTRNETMRQSVTIGKLAKVFVPPFKVKSHLHKDEHHVSKQTNFEEEKQKQRKIEECGSSDCENINSEIHQFSKDSSCQEATMIFTKCKEPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRAWAYNHYRWLIWKLAAMEFSFPKEFANRCLNPERVLLQLKYRYDMEIDRSKRSAIKKIMERDDTPAKTLVLCVSDIISSTSETCSNKTDGADTKNVAMLELTDGWYAVKAQLDPPLLALLKNGRLAVGQKIITHGAELIGSPDACAPLEAPDSLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCADVIVQRVYPIQWMEKTPSGLYIFRNEKEEEREAAKFAEAQQKKLEALFTKIQTEFEKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSEEQLRALNNHKQMLNDKKQAQIQLEFQKAMESAEKVEERLSRDVTPVWKLCIVSYGKKGRDAVTLSIWRPSSAVLSLLTEGNRYRIYHLATSKSKCKSERANIQLTATKRTQYQQLPASDEILFQVYQPREPLQFSRLLDPDFQSPCSEVDLIGFVVSVVKKIGLAPLVYLSDEYHNLLAIKFWIDLNEDVIKPHTLIAASNLQWRPESKSGIPTLFAGDHSMFSASPRENHFQERFHKMKNTVENIDVLCNDAKKKLMSLLNANYPKWSNPTKDYKSEPCPAYSALGVDNEVLSSPSSKQNYQSHLSLCTPKEKCLPNPVSAQMISESSHKEEKEIDDPTCKKRKALEFLTRLPLPPPVSPICTFVPAAQKAFQPPRSCGTKHRTTKRKELNFPPVTPFKKVNEISLLERDSIADEELALLNTQSLVSDSMGESHLLIRESKRTTPSSTQDHLGQKKQQESLMGGQGNPQAGTKECEK</mol_seq> |
803 </sequence> | 961 </sequence> |
804 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">dipodomys_ordii</property> | 962 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">dipodomys_ordii</property> |
805 </clade> | 963 </clade> |
806 <clade branch_length="0.156559"> | 964 <clade branch_length="0.15806"> |
807 <confidence type="bootstrap">100</confidence> | 965 <confidence type="bootstrap">100</confidence> |
808 <taxonomy> | 966 <taxonomy> |
967 <scientific_name>Murinae</scientific_name> | |
809 <id>39107</id> | 968 <id>39107</id> |
810 <scientific_name>Murinae</scientific_name> | 969 <common_name>Old World rodents</common_name> |
811 </taxonomy> | 970 </taxonomy> |
812 <clade branch_length="0.044347"> | 971 <clade branch_length="0.043615"> |
813 <name>ENSRNOG00000001111</name> | 972 <name>ENSRNOG00000001111</name> |
814 <taxonomy> | 973 <taxonomy> |
815 <id>10116</id> | 974 <id>10116</id> |
816 <scientific_name>Rattus norvegicus</scientific_name> | 975 <scientific_name>Rattus norvegicus</scientific_name> |
976 <common_name>Rat</common_name> | |
817 </taxonomy> | 977 </taxonomy> |
818 <sequence> | 978 <sequence> |
819 <accession source="Ensembl">ENSRNOP00000001475</accession> | 979 <accession source="Ensembl">ENSRNOP00000001475</accession> |
820 <name>Brca2-001</name> | 980 <name>Brca2-001</name> |
821 <location>12:504007-544748</location> | 981 <location>12:504007-544748</location> |
822 <mol_seq is_aligned="0">MTVEYKRRPTFWEIFKARCSTADLGPISLNWFEELSSEAPPYNTEPPEESEYKPQGHEPQLFKTPQRNPSYHQFASTPIMFKEQSQTLPLDQSPFKELGNVVANSKRKHHSKKKARKDPVVDVASLPLKACPSESPCTPRCTQVAPQRRKPVVSGSLFYTPKLEETPKHISESLGVEVDPDMSWTSSLATPPTLSSTVLIARDEEAHRNAFPADSPASLKSYFSNHNESLKKNDRFIPSVSDSENKSQQEAFSQGLEKMLGDSSSKINRFRDCLRKPIPNVLEDGETAVDTSGEDSFSLCFPKRRTRNLQKTRMGKMKKKIFSETRTDGLSEEARGQADDKNSFALEIEPRDSEPLDPSVTNQKPLYSQSGDISSEAGQCSDSIWSQPDPSGLNGTQTRKIPLLHISSHKQSILEDFIDMKKEGTGSITFPHISSLPEPEKMFSEETLVDKEHEGQHLESLEDSISGKQMVSGTSQTACLSPSIRKSIVKMREPLEETLDTVFSDSMTSSAFTEELDASAGGLEIHTACSQREDSLCPSSVDTGSWPTTLTDTSATVKNAGLITTLKNKRRKFIYSVSDDASHQGKKLQTQRQSELTNLSAPFEASAFEVPFPFTNVDSGIPDSSIKRSNLPNDPEEPSLSLTNSFVTAASKEISYIHALISQDLNDKEAILSEEKPQPYTALEADFLSCLPERSCENDQKSPKVSDRKEKVLVSACRPSGRLAAAVQLSSISFDSQENPLGSHNVTSTLKLTPSPKTPLSKPVVVSRGKMCKMPEKLQCKSCKDNIELSKNIPLGVNEMCVLSENSETPELLPPLEYITEVSSSVKSQFNQNTKIAVVQKDQKDSTFISEVTVHMNSEELFPEKENNFAFQVTNESNKPNIGSTVEFQEEDLSHTKGHSLKNSPMTVDRDLDDEQAGQVLITEDSDSLAVVHDCTKKSRNTIEQHQKGTADKDFKSNSSLYLKSDGNNDYLDKWSEFLDPLMNHKFGGSFRTASNKEIKLSEDNVKKSKMFFKDIEEQYPTSLDCIDTVSTLQLANKKRLSEPHTFDLKSGTTVSTQCHSQSSVSHEDTHTAPQMLSSKQDFHSSHNLTPSQKAEITELSTILEESGSQFEFTQFKNPSHIAQNNTSAVLGNQMAVVRTASEEWKDVDLHLPLNPSSVGQIDHNKKFECLVGVKQSSSHLLEDTCNQNTSCFLPIKEMEFGGFCSALGTKLSVSNEALRKAMKLFSDIENISEEPSTKVGPRGFSSCAHHDSVASVFKIKKQNTDKSFDEKSSKCQVTVQNNKEMTTCILVDENPENYVKNIKQDNNYTGSQRNAYKLENSDVSKSSTSGTVYINKGDSDLPFAAEKGNKYPESCTQYVREENAQIKESVSDLTCLEVMKAEETCHMKSSDKEQLPSDKMEQNMKEFNISFQTASGKNIRVSKESLNKSVNILDQETEDLTVTSDSLNSKILCGINKDKMHISCHKKSINIKKVFEEHFPIGTVSQLPALQQYPEYEIESIKEPTLLSFHTASGKKVKIMQESLDKVKNLFDETQYVRKTTNFGHQESKPLKDREDYKERLTLAYEKIEVTASKCEEMQNFVSKQTEMLPQQNDHMYRQTENLTSNGSSPKVHGNIENKIEKNPRICCICQSSYFVTEDSALACYTGDSRKTCVGESSLSKGKKWLREQSDKLGTRNTIEIQCVKEHTEDFAGNALYEHSLVIIRTEIDTSHVSENQASTLFSDPNVCHSYLSHSSFCHHDDMHNDSGYFLKDKIDSDVQPDMKNTEGNAIFPKISATKEIKLHPQTVNEECVQKLETNASPYANKNIAIDSAMLDLRNCKVGSPVFITTHSQETVRMKEIFTDNCSKIVEQNRESKPDTCQTSCHKALDNSEDFICPSSSGDVCINSPMAIFYPQSEQILQHNQSVSGLKKAATPPVSLETWDTCKSIRGSPQEVHPSRTYGIFSTASGKAVQVSDASLEKARQVFSEIDGDAKQLASMVSLEGNEKSHHSVKRESSVVHNTHGVLSLRKTLPGNVSSSVFSGFSTAGGKLVTVSESALHKVKGMLEEFDLIRTEHTLQHSPTPEDVSKIPPQPCLESRTPEYSVSSKLQKTYNDKSRSPSNYKESGSSGNTQSLEVSPQLSQMERKQETQSVLGTKVSQRKTNILEKKQNLPQNIKIESNKMETFSDVSMKTNVGEYYSKEPENYFETEAVEIAKAFMEDDELTDSEQTHAKCSLFACPQNEALLNSRTRKRGGMAGVAVGQPPIKRSLLNEFDRIIESKGKSLTPSKSTPDGTIKDRRLFTHHMSLEPVTCGPFCSSKERQETQSPHVTSPAQGLQSKGHPSRHSAVGKSSSNPTVSALRSERTRHSVSDKSTKVFVPPFKVKSRFHRDEHFDSKNVNLEGKNQKSADGVSEDGNDSDFPQFNKDLMSSLQNARDLQDIRIKNKERHHLCPQPGSLYLTKSSTLPRISLQAAVGDSVPSACSPKQLYMYGVSKACISVNSKNAEYFQFAIEDHFGKEALCAGKGFRLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISSVWVSNHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSSRSALKKILERDDTAAKTLVLCVSDIISLSTNVSETSGSKASSEDSNKVDTIELTDGWYAVKAQLDPPLLALVKSGRLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSKLGFFHDPRPFPLPLSSLFSDGGNVGCVDVIVQRVYPLQWVEKTVSGSYIFRNEREEEKEALRFAEAQQKKLEALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAELYAAVQDASDPEHLETCFSEEQLRALNNYRQMLSDKKQARIQSEFRKALEAAEKEEGLSRDVSTVWKLRVTSYKKREKSALLSIWRPSSDLPSLLTEGQRYRIYHLSVSKSKNKFEWPSIQLTATKRTQYQQLPVSSETLLQLYQPRELLPFSKLSDPAFQPPCSEVDVVGVVVSVVKPIGLAPLVYLSDECLHLLVVKFGIDLNEDIKPRVLIAASNLQWRPESTSRVPTLFAGNFSVFSASPKEAHFQERVTNMKHAIENIDTFYKEAEKKLIQVLKGDSPKWSTPNKDPTREPYPASTCSASDLASGGQLPRSSPTDQQSYRSPLSCCTPTGKSTPLAHSAWMAAKSCSGENEIEDPKTCRKKRALDLLSRLPLPPPLSPVCTFVSPAAQKAFQPPRSCGTKYPTPLKKEGPSSPWSRAPFQKASGVSLLDCDSVADEELALLSTQALVPHSVGGSEQVFPSDSTRTEGPSASTEARPANRSKRESLRDCRDDSDGKLAAETVPDYS</mol_seq> | 982 <mol_seq is_aligned="0">MTVEYKRRPTFWEIFKARCSTADLGPISLNWFEELSSEAPPYNTEPPEESEYKPQGHEPQLFKTPQRNPSYHQFASTPIMFKEQSQTLPLDQSPFKELGNVVANSKRKHHSKKKARKDPVVDVASLPLKACPSESPCTPRCTQVAPQRRKPVVSGSLFYTPKLEETPKHISESLGVEVDPDMSWTSSLATPPTLSSTVLIARDEEAHRNAFPADSPASLKSYFSNHNESLKKNDRFIPSVSDSENKSQQEAFSQGLEKMLGDSSSKINRFRDCLRKPIPNVLEDGETAVDTSGEDSFSLCFPKRRTRNLQKTRMGKMKKKIFSETRTDGLSEEARGQADDKNSFALEIEPRDSEPLDPSVTNQKPLYSQSGDISSEAGQCSDSIWSQPDPSGLNGTQTRKIPLLHISSHKQSILEDFIDMKKEGTGSITFPHISSLPEPEKMFSEETLVDKEHEGQHLESLEDSISGKQMVSGTSQTACLSPSIRKSIVKMREPLEETLDTVFSDSMTSSAFTEELDASAGGLEIHTACSQREDSLCPSSVDTGSWPTTLTDTSATVKNAGLITTLKNKRRKFIYSVSDDASHQGKKLQTQRQSELTNLSAPFEASAFEVPFPFTNVDSGIPDSSIKRSNLPNDPEEPSLSLTNSFVTAASKEISYIHALISQDLNDKEAILSEEKPQPYTALEADFLSCLPERSCENDQKSPKVSDRKEKVLVSACRPSGRLAAAVQLSSISFDSQENPLGSHNVTSTLKLTPSPKTPLSKPVVVSRGKMCKMPEKLQCKSCKDNIELSKNIPLGVNEMCVLSENSETPELLPPLEYITEVSSSVKSQFNQNTKIAVVQKDQKDSTFISEVTVHMNSEELFPEKENNFAFQVTNESNKPNIGSTVEFQEEDLSHTKGHSLKNSPMTVDRDLDDEQAGQVLITEDSDSLAVVHDCTKKSRNTIEQHQKGTADKDFKSNSSLYLKSDGNNDYLDKWSEFLDPLMNHKFGGSFRTASNKEIKLSEDNVKKSKMFFKDIEEQYPTSLDCIDTVSTLQLANKKRLSEPHTFDLKSGTTVSTQCHSQSSVSHEDTHTAPQMLSSKQDFHSSHNLTPSQKAEITELSTILEESGSQFEFTQFKNPSHIAQNNTSAVLGNQMAVVRTASEEWKDVDLHLPLNPSSVGQIDHNKKFECLVGVKQSSSHLLEDTCNQNTSCFLPIKEMEFGGFCSALGTKLSVSNEALRKAMKLFSDIENISEEPSTKVGPRGFSSCAHHDSVASVFKIKKQNTDKSFDEKSSKCQVTVQNNKEMTTCILVDENPENYVKNIKQDNNYTGSQRNAYKLENSDVSKSSTSGTVYINKGDSDLPFAAEKGNKYPESCTQYVREENAQIKESVSDLTCLEVMKAEETCHMKSSDKEQLPSDKMEQNMKEFNISFQTASGKNIRVSKESLNKSVNILDQETEDLTVTSDSLNSKILCGINKDKMHISCHKKSINIKKVFEEHFPIGTVSQLPALQQYPEYEIESIKEPTLLSFHTASGKKVKIMQESLDKVKNLFDETQYVRKTTNFGHQESKPLKDREDYKERLTLAYEKIEVTASKCEEMQNFVSKQTEMLPQQNDHMYRQTENLTSNGSSPKVHGNIENKIEKNPRICCICQSSYFVTEDSALACYTGDSRKTCVGESSLSKGKKWLREQSDKLGTRNTIEIQCVKEHTEDFAGNALYEHSLVIIRTEIDTSHVSENQASTLFSDPNVCHSYLSHSSFCHHDDMHNDSGYFLKDKIDSDVQPDMKNTEGNAIFPKISATKEIKLHPQTVNEECVQKLETNASPYANKNIAIDSAMLDLRNCKVGSPVFITTHSQETVRMKEIFTDNCSKIVEQNRESKPDTCQTSCHKALDNSEDFICPSSSGDVCINSPMAIFYPQSEQILQHNQSVSGLKKAATPPVSLETWDTCKSIRGSPQEVHPSRTYGIFSTASGKAVQVSDASLEKARQVFSEIDGDAKQLASMVSLEGNEKSHHSVKRESSVVHNTHGVLSLRKTLPGNVSSSVFSGFSTAGGKLVTVSESALHKVKGMLEEFDLIRTEHTLQHSPTPEDVSKIPPQPCLESRTPEYSVSSKLQKTYNDKSRSPSNYKESGSSGNTQSLEVSPQLSQMERKQETQSVLGTKVSQRKTNILEKKQNLPQNIKIESNKMETFSDVSMKTNVGEYYSKEPENYFETEAVEIAKAFMEDDELTDSEQTHAKCSLFACPQNEALLNSRTRKRGGMAGVAVGQPPIKRSLLNEFDRIIESKGKSLTPSKSTPDGTIKDRRLFTHHMSLEPVTCGPFCSSKERQETQSPHVTSPAQGLQSKGHPSRHSAVGKSSSNPTVSALRSERTRHSVSDKSTKVFVPPFKVKSRFHRDEHFDSKNVNLEGKNQKSADGVSEDGNDSDFPQFNKDLMSSLQNARDLQDIRIKNKERHHLCPQPGSLYLTKSSTLPRISLQAAVGDSVPSACSPKQLYMYGVSKACISVNSKNAEYFQFAIEDHFGKEALCAGKGFRLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISSVWVSNHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSSRSALKKILERDDTAAKTLVLCVSDIISLSTNVSETSGSKASSEDSNKVDTIELTDGWYAVKAQLDPPLLALVKSGRLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSKLGFFHDPRPFPLPLSSLFSDGGNVGCVDVIVQRVYPLQWVEKTVSGSYIFRNEREEEKEALRFAEAQQKKLEALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAELYAAVQDASDPEHLETCFSEEQLRALNNYRQMLSDKKQARIQSEFRKALEAAEKEEGLSRDVSTVWKLRVTSYKKREKSALLSIWRPSSDLPSLLTEGQRYRIYHLSVSKSKNKFEWPSIQLTATKRTQYQQLPVSSETLLQLYQPRELLPFSKLSDPAFQPPCSEVDVVGVVVSVVKPIGLAPLVYLSDECLHLLVVKFGIDLNEDIKPRVLIAASNLQWRPESTSRVPTLFAGNFSVFSASPKEAHFQERVTNMKHAIENIDTFYKEAEKKLIQVLKGDSPKWSTPNKDPTREPYPASTCSASDLASGGQLPRSSPTDQQSYRSPLSCCTPTGKSTPLAHSAWMAAKSCSGENEIEDPKTCRKKRALDLLSRLPLPPPLSPVCTFVSPAAQKAFQPPRSCGTKYPTPLKKEGPSSPWSRAPFQKASGVSLLDCDSVADEELALLSTQALVPHSVGGSEQVFPSDSTRTEGPSASTEARPANRSKRESLRDCRDDSDGKLAAETVPDYS</mol_seq> |
823 </sequence> | 983 </sequence> |
824 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">rattus_norvegicus</property> | 984 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">rattus_norvegicus</property> |
825 </clade> | 985 </clade> |
826 <clade branch_length="0.034382"> | 986 <clade branch_length="0.034254"> |
827 <name>ENSMUSG00000041147</name> | 987 <name>ENSMUSG00000041147</name> |
828 <taxonomy> | 988 <taxonomy> |
829 <id>10090</id> | 989 <id>10090</id> |
830 <scientific_name>Mus musculus</scientific_name> | 990 <scientific_name>Mus musculus</scientific_name> |
991 <common_name>Mouse</common_name> | |
831 </taxonomy> | 992 </taxonomy> |
832 <sequence> | 993 <sequence> |
833 <accession source="Ensembl">ENSMUSP00000038576</accession> | 994 <accession source="Ensembl">ENSMUSP00000038576</accession> |
834 <name>Brca2-201</name> | 995 <name>Brca2-201</name> |
835 <location>5:150522630-150570329</location> | 996 <location>5:150522630-150570329</location> |
837 </sequence> | 998 </sequence> |
838 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">mus_musculus</property> | 999 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">mus_musculus</property> |
839 </clade> | 1000 </clade> |
840 </clade> | 1001 </clade> |
841 </clade> | 1002 </clade> |
1003 <clade branch_length="0.08278"> | |
1004 <name>ENSSTOG00000005517</name> | |
1005 <taxonomy> | |
1006 <id>43179</id> | |
1007 <scientific_name>Ictidomys tridecemlineatus</scientific_name> | |
1008 <common_name>Squirrel</common_name> | |
1009 </taxonomy> | |
1010 <sequence> | |
1011 <accession source="Ensembl">ENSSTOP00000004979</accession> | |
1012 <name>BRCA2-201</name> | |
1013 <location>JH393282.1:26945680-27015735</location> | |
1014 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCSGADLGPISLNWFEELSSEASLYNSEPAEESEYKTHSYEPNLFKTPQRKLSYHQLASTPIIFKDQGQIQSPLQELGKYRSDLGKNITNSERKSRHTMKAKVGQENDVTSPPLNSCLSESPLALQCTRVTPQREKPVVCGSLFHTPKLVKGQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVKDEEAPETVFPNDTTTILKSYFFNHDESVMKNYRFSPSVSDNENKNERETSHHGLGKMLGNSFGKENSYKKHVGKSMPTALEDEVHEIVADISEEDSFSLHSSKYKTGILQRIRMGKTRKKIFSETRTDEFNEEAEKQMKENKHLFASVIEPSGSGPLDSNITNQKPIGNESDKISNEVVPSSGCEQSKLTFSGLNGTQMERIHLLHISYDQNNTEKDLKDTRKECSSCIISENPLPHTSSLPNSKKILNEKTLVDRRVEGQHLKSHEDSFLAATHAPSEISPVVSPFQGIKKSIFQTFCPSSVDNGSWPATISHTSKHTGLISTLKKKTKKFIYTINDETFHQGKEIQKDQKLELTYSAAQLEASAFEAPLTFTNPDSGLLHSSVKRNYLQNDAEEPTLSLINSSGTILRKCSNNQDSHVNTIVSQDLQEGEVHKEKPKSFIAPETDFLSCLQERQCEDNAESQKVSEKKEKVLVAACHPVVQHLEVESGGIHFPSQKVLLDDDNTNTLLLTPSSRDPGMISRGKESYKMSEKLKCKNCEGSIESSKNSPMEKCQEMCFLNENSKKPELLSKKYVTEVSPSMNMQFNQNINITVIQKGQEKTPLISEITVNPNSKELFPDIENNCVFQITSERNNRVLGNTKELHEADLSCVRKTFPKNSTMVVDTDMAEKQVAHVSVSDSIDSSGIVHDLTEENRNRVKQQLKIISGQDLKANTSLSLKSNRSKGFMDKWAGPLDPVSYHNVGGSFRTASNKEIKLSDHDIKKSKMLFKDIEEQYPASLGCIEIVNTLSFDNQKKLNKPCVSDSQSVNTVSAYVKSSTFLSDFENNHTTPQVLPLRGDFNSNHTLTPSQKAEIKELSTILEESGSQFEFTQFRKTSQIIQNNTFEVPRNQTGLKTSSEEWKDDVHQTIDTSSVAQVESSKKFEGAVGVKQKFAHLLKNNCNKSASNYLTDENKDFRGFYSARGTKLSISSEALQKAVKLFSDIENISEETKAEVDPGSFSSSKCPDSIVSIFKMESHSDDNNLNKKNNECQLTLQNKFEMATHILDEENTENYMKNTENEDNKCTNDNRNTCKLEESDQGDSSKNDTVSGHKDENDLPCTDQHNIDLKLPSQFVKEGSTQFKESLSDLTCLEVVKAEETCHVNFFNKEQLTADKMEQNIKDCGIFDISFQTASGKNINVSKESLNKVVNFFDQKTEELSNFSDSLNSKLLSGINKKKMDISRHGTIDMVKNKILKEGIPVDIDSQLLTLQQQPEYEIEKNKESNLLSFHTASGKKVQIAKESLDKVKNIFDEKKQDVSKITSFTQQGTKTLKDRKDCKGFELACEMITVPKCEEMQDSLINNEKKIVYNEPGVLPRLSDDLYGQTKHLDTLNISLKVKMHEHIEKETTNSPTACRTNQFSYSATGDSALAFYTGHGKKISVNQASLLEAKQWLRKEELDGQGERNTAKAESIKEYGGNPLYENSSDSIMTEKDKIHFSEKQDSAYLSNNSMSNSYSAFCHSSDVCDDSGYLSKNKSNSDIELVMKDKKNTSFRKADIYPQIVNEDTSVQKFVTNFSPCKSKDRTTNMAIPDFKSFEIGPPAFSTASGKIVCISRDAVRKVKKIFTEDHSNVIKENTENKSDICQGKIVKAYSEALDNLEDVIFPNSIGDEECMPSHKVFTDIQSEQIVQHNQKLSGLGKVSEISPCVNLETSDMCEFNRGELPKSFSSTNACGIFSTASGKSVQVSDTSLQKARQIFSEIEDNANQLFSKVSLKSNEEHSNPFTREKSTMAHAPPNVLSPGKSFLCNINSSFSGFSTASGKKVAVSESALHKVKGMLEEFDLMGTEQTLQYSPTSRQDISRMLPPPRIEKRIVEHSVSSKMEKAYNNEFNDNVENASSGNNHCVKVSPYVSQLKQGRQHLVLGTKLSLVENTHLLGKEQTLSKNIIEIGQTETFSSVSVKTNVEVCSTYSKDPENCFETEAVEIAKAFMEDGELTDSEPPTHAKHSFFMCQKNEEMILLNSRTGKRRGNALVSVGEPPIKRSLLNEFDRIIENEEKSLKTLKSTPDGTINDRRLFTHHISLEPIICGPVRTIKKQQETQKPNFTVPGQKFLSKSHLYEHLTSEKSSSNLPVSEQPLYKDPATRKEKMRYSITTGKSNKVFVPPFKTKSHLYRDEHCVSKNINLCENKQKQRNINECGSCNKENNINDSDIHQFDKNSTSQVTTTIVPNCEEESLDLIISLQNARDKQDMRIKKKQGQHIFPQPGSLYLAKTSTLPRISMKAAVGGQAPSACSHKQLYMYGVSKHCIKINSKNAGSFQFHTQDYFSKEDLWSGKGVQLADGGWLIPSNDGKTGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDRSRRSAIKKILERDDTAAKTLVLCVSDIISSITDISETSSSKTSGVDAKKVAIIELTDGWYAVKALLDPPLLALLKNGRLAVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVVVQRVYPMQWMEKTSSGLYIFRSEREEEKEAARHADAHQKKLETLFAKVQAEFEEHEEHTTKQCVPSRALTRQQVHALQDGAELYEAVKNAPDPDYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQEEQGLSRDVTAVWKLRIVSYRKKEKDSAMLSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERAHIQLSATKKTRYQQLPASDEVLLQVYHPREPLHFNRLLDPDFQPPYSEVDLIGFVVSVVKKIGLAPLVYLTDECHNLLAIKFWIDLNEDIIKPHVLIAASNLQWRPESKSGIPTLFAGDFSTFSGSPREGHFQQRLNKMKNTIENIDIFCNDVEKKLMHLLNANDPKCSTPNKEYTSEPHTTQTVLSTGNKFLMTSPNSEINYQSPLSLCTPKGKSVSTPVSTRMTSKSCSKGEKEIDDPKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGSKYETPIKKKELNSPQMTPLKKFNEISLLESDSIPDEELALINTQAILSGSARKSQLSLSDSMRTAPSGSRDSLRQKRHMTSLVRDEENSQNSTEECETSIQDTSAINLPKYL</mol_seq> | |
1015 </sequence> | |
1016 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ictidomys_tridecemlineatus</property> | |
1017 </clade> | |
842 </clade> | 1018 </clade> |
843 <clade branch_length="0.137701"> | 1019 </clade> |
844 <name>ENSCPOG00000005153</name> | 1020 <clade branch_length="0.052649"> |
1021 <confidence type="bootstrap">100</confidence> | |
1022 <taxonomy> | |
1023 <scientific_name>Lagomorpha</scientific_name> | |
1024 <id>9975</id> | |
1025 <common_name>Rabbits and Pikas</common_name> | |
1026 </taxonomy> | |
1027 <clade branch_length="0.126495"> | |
1028 <name>ENSOPRG00000015365</name> | |
845 <taxonomy> | 1029 <taxonomy> |
846 <id>10141</id> | 1030 <id>9978</id> |
847 <scientific_name>Cavia porcellus</scientific_name> | 1031 <scientific_name>Ochotona princeps</scientific_name> |
1032 <common_name>Pika</common_name> | |
848 </taxonomy> | 1033 </taxonomy> |
849 <sequence> | 1034 <sequence> |
850 <accession source="Ensembl">ENSCPOP00000004635</accession> | 1035 <accession source="Ensembl">ENSOPRP00000014082</accession> |
851 <name>BRCA2-201</name> | 1036 <name>BRCA2-201</name> |
852 <location>scaffold_6:33778275-33853154</location> | 1037 <location>GeneScaffold_410:590036-664083</location> |
853 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKRRCDKADLGPISLNWFEELSSEAPPFNSEPAEESEYKVNTYEPNPFKTPQRKPCYQLASTPIIFKEQGQTLPLYQSPLNELGTDIADTELKNCHTVKANVDRISDVTSPPLNSCFSESPLVLRCTQKTPQRKMPVICGSLFHTPRLVKGQTPKHIPESLGAEVDPDMSWSSSLATPPTLGSTVLLVRDEVSETIFPNDTTVILKHSLSSHDENLKKNDSFIPPVMENENKNQREASHSGLGEVVGNSFGKTCSSKDHFGKLMPNPLENEVHETVTDIFDEDSFSLCFPKYRTGNLQKTSKTRKKIFHEARTDDFKEQMKENKHSLTSEMEPNDGDPLDSDVASQKPLGPESDRISKEAAPSSSCEWSQLTFPGPNATQRKEMPVLPVSSYDQDNSGKDSIESEKESSNHNTSENSLPHTSSLSEKISNGEKPVDERDGRQHPESHEDSIRAVKGTVSWTSPVSPLFQGAKRPIFKIGEPSEDTFNTVLSDIVMKPNFKETETSKSGLEMYTDCSQKEDSLCLSSVDNRSLPAAIPHSSVTLKNTGLISSLKKKTKKFIYAINDKACYQRENLQENQKTELTSHSAQFEADTFKASLTFTNADAGLSHSSVKRNCFQNDPKESTFLTNSSGTSPRKHSNNESSYANKIISQDLNYNETKLNKEKSQSLTSPETDFLSCLQKRRWDDDPKSQKVSDIKENVLVVTCQPEARHSEAEHSGILFQSQKSFFDGHDNTSPLTLTPSSKDPLLNPVMISKGKKSYKISEKLKRENCETGIELAQNISIENNQEICVLNLNSKKTELLPPEKYVSAASPSVTMPFSHNTNLTATQEDQEETSLISEMPGNPNSEELFAGNKNNFVFQITDESSPVLGKTKEVHGSDCSFMKESILQNSAMVVDTDIDDKQVVQMPITEDFGPSNTIHDLKENRTDVKQHLASGQDLKSDLSLDRKPNRNDYTHKMTVILGPVSSHSFGGGFRTASNKEIKVSQHYIKKGKMLFKDIEEQYPTSSAPVEIVNALLNNEKKLNKPHAFDLQSVNTVSTYVQRSASISDHENHTASQRLSVKQDFNSNLNLTPSQKAEITELSSILEESGSQFEFTQLRKPNHLIKSNTLQVPGNQMTALSTTSKESKDVNLQAIIDASSICQVGSSKKFGGAAGEKQKSACLLKNNPNKSAAGFLTNENEVAYRGFYSGLGTKKLSVSSEAPQKPLKLFSDIENISEETSDKVDPSFSASKCYDSVASVFKIENHNNNKNVNVKNSCQAVLQSNAEMTTGNFAEENTENCMRNSENEDNKYIGTSTNNCKLGKPGGTDSSKNDTGYIQKDNDLPCKDQHNMHLKLSSQFMSEVSTELKETLSDLTCLEVVKAEETCYINSNEQLTTDEMEQYTNNFGISFQTASGKNISVTKESLNKAVNLFDQETEEWNDFSDSLNCKLLPGIKNKMDISSHEETNVMKNKILEKSTPAGTAAQLCVLQQPECKIENEPNLLGFYTASGKKVNIAKESLNKVKNLFDENRQDVSKITKWGHQVAKILSDRQDCEERLELARETVAITDIPQCEEMPSVSGGLHRQTKNLKASNSISLKVKVPENVEKGIANPPTTSCTDQFSYSAIKDLPVAFYTGHGKKIPVNPALLFKATKWLKDLNDEHEEDCVGNPSRYLSKNQVDSGTELVMNVKDKNNTDFSEVVPTIKVSTHPQAINEDVCVQQPVTISSPFKSKNPAVNVAVSDSGNYEVGPPAFSTASSKMVFVSQDSTEKQVFIENCNKTINQNTESKSDTCQRETVTGSKALDNSEDAIFPDSPDDEECVRSCKSFADTQSEESLQHNKSMSGLETIFERPSYVSLKAPDKCKFSDTEKLPKTMSSNIYGIFSTASGKSVQVSNGSLQKAKQMFSKTEDSAKQLFSKVFKSSEHSDQFTKEEITVMRTPSKHSARSTAFSGFSTASGKQVSVSESALHKVKGMLEEFDLIQTAYTLGHSTSSRQDVSKIPLCIDESTPQHSIDFKMQKNCNNEYKVSSNYNTESSSSEGNHSVTLSPCLSQFKQDKQHLVLGTRGSLFENAHILREEQAFPQNSMEISKTETFSNDSVRTSAEVCSPNPEEPETYFETEAVEIAKAFMEDDELTDSEPPGHPGHSLSTCQKKEGVLLNSRAGKRRGGALVSVGESQIKRSLLNEFDRIKENEEKSLKASKCTPDGTVKDRKRFTHHISLEPVTCGPSCTTSNRQEIQNLNCTAPDQEFLSTSHLYEHLTLEKSSTSLPVSRQPFYKVPAVRSENTRYSTTASKPVKVFVPPFKTKSHFHRDECFVSRDINLEENKQKQQNIDDCGSDDSENNVDGSEIHQFNKNCSNQGTVKIFPKCKEEPLADLMTSLQNARKIQDIRIKEKEKQHIFPQPGSLYLAKTSSLPRISLKAAVGGRVPSACSHKQLYMYGVSIHCMKINSKNAESFKFHIQDYFGKEDLQAGKGIQVADGGWLIPDNDGKAGKEEFYRALCDTPGVDPKLISRVWVCNHYRWIIWKLAAMEVAFPQEFASRCLNPERVLLQLKYRYDVEIDRSRRSAIKKILERDDIAAKTLVLCVSDIVSSNTNTSEGSGDKASADIKKAAVVELTDGWYAVRAQLDPPLTTLLKSGRLAVGQKVVTHGAELVGSPDACAPLEAPESLMLKISANSTRPARWDARLGFLPDPRPFPLCLSSLFSDGGAVGCADVVVQRVYPVQWVEKTSSGLYIFRNEREEEKEAAKHAEAQQKKLEALFSRIQAQFEEREANPAKRCTSSHALTRQQVRALQDGAELYEAVRSAPEPGYLEGCFSEEQLRALNKHRQMLDAKRQAQMQLEFRKAVEHAEQGERGLARDVAALWRLRVVSHERKEDCSVILSIWRPSSDLHSLLTEGKRYRIYHLAASKSKSKSERANIQLTTQYQQLTASDEILLQAYRPRQALCFSRLLEPDFQPPYSEVDLIGFVVSVVKKIGLAPLVYLTDECYNFLAVKFWIDLNEDIIRPHMLVAASNLQWRPESNSGIPTLFAGDFSVFSASPKEGHFQERFNKMKTVVENVDTFCNDAAEKLTHFLGVSDPKRAPPSTDCTSELHTAQTGLGTRNKCLMSSPSDEINYQSALSLCCPKGKSVSTPIAAQITSKSCAEQKAVNDPKNSKKRRALDFLSRVPLPPPVSPICTFVSPAAQKAFQPPRICDTKYETPKLDFPQMTPLKKASAVSLLESNSIADEELAMINTQALLSGSAGENQLPSARESRRTAPSSSGDYLGQKGHCAVPLVTGQENSQASTGECKSNLQDTSRIKNLSKRLQRRQKHK</mol_seq> | 1038 <mol_seq is_aligned="0">MPTGTKERPTLFEIFKMRCNVTDLGPISLNWFEELSSEAPPYNSEPTEESGYKSSNYEPHLFKTPQRKLPYHQLASTPIIFKDRGLSLALYQSALQELSEYRSALGRILPSNEHKSCCKMKAKTERVNAINSPLLNPSESPVIQYTHVTPQRKKSVVCGSLFHTPKLLKGQTQKHISESLAAEVDSDMSWSSSLATPPTLASTVIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSFGEVNSCEDHFEKIPSVLDDEVCEAVTDVLEEDSFFSQHKMGSVQNKSEKTREEIFSEKETDKCDEAEKQTKGDKHSFPREMETKNCDPLDSNVTNQEPSESGNDEITKAFIPSESSQLSLSNLKELKMEKIPLAHVSSWDQSGLEEDPMDTESMQPLTPQDSSPPTSDLPKLETTLNEEPVVHNGDEAQHLGSPDSLLEVKPVISQICSVVSPFEGIKKSIFKITESPEETFDTFFSSDVTNSDFQEKTEISERGMGMHTSYSQKEKSLCQSLAASGSSPAAVTLSSANSKNSSLISTLKKKTKKFIYAVKNESYQGKRIQKDQNVELTNCSAHFEANALDPPLAFANADSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCNNITDLTVQKDQEETTLISEMANPKAEESFLDNENSFVFHVTNERNSLVWESSRELYEAALSPVKDSLLQTSNVVVCEGISDKQVAHASTTKDFDLSLMVHDLAEENKNHVKHHLKVTLGQDLKSDTSSDIYRKSNGNNDMDKWAGLSDPISNHSLGSSFRTASNKEIKLSEHKITKSKMLFKDIEEQYPMSLACVEIMNAMPSDNQKKLTNPDLFDSQPVTAISAYVQSSAFDSDCENNHRAPQVSSLRDDINNLTPSQKAEITELSAILEESGSQFEFTQFRKPSHIMEGNTLEVPGIQMTILNTTTDEREDAHLGCTVNASSSSHIDGNKKFEKAVGIQQNFGCSLKSCTSTNVADNEVEFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQGLREGELDQSEKNAANYIEKPSCENSSNSTVTESDKHHLSGKLDSVYLNNNVSHNSPCHSDNIHNDSGYLSKDKIDSGHEPAVKNVDPTTSGFSNVMSSVREENRCSETMKEDGCDLKCVTKSSPCRNKERATNLAVPHGRDFKVGPPAFSTASGKTVCVSHEAILKVKERFASDCSKMIKPNTGSKSDSSQTKIMAGYFKSSGNPKDDVIFPNPVSNNGKSVYSHKGFADLQNEQMLQYNQRLSALGQVSELSPCRVSMKTLDVCNFNEGMVPKPVFSANSGIFSTANGKPVHVSDAALQKAKQMFSETEGSAEQLFSKVSFKGKERSDQFTGDESAVTDGPENTLFQKDVPYNVINVSAFSGFSTASGKHVSVSESALQEVKGMLEEFDSIRAEHSLQDSPTYRQSVLKVTPPPCVTKRTPEHSVNSKRGSVCSKENESPSDCNNERCSSDYHCREVSPCISHFKKDKQLLLKNKIPLAENTCLLGKKQALPKRTNMETGKTETFSSDPVRTKKEICSAYSGNYSEMEAIEIAEAFMEDGELTDSEVSDFGKHSYQKNKGMAFFNSRMGKRRGDAFVSVGEPPMKRNLLNEFDRIVENEDKSLKPSKSTPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEKSSSSSISEQTFSEVPTTANEKMRHSVATDNPSKVFIPPFKVKSHFQKDEQCVGMDIHLEENKQNHKNISEHGPDDSETQIGAGETHEFNKSGSDQATTVIFTKCEEEPLDLIASFQHGRDMQDMRIRKKKRQRIFPQPGSLYLTKTSTLPKISLKTAVGGQIPSAYSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISREWVYHYRWIIWKAAMEFAFGFANRCLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISANSTRPASWHTKLGFFRDPRPFPPPLSSLFSDGGSVACVDVVIQRTYPVQWMEKTSSGLYVFRNEREEEKEAAKYAEVQQKKMEALLTKIQAEFEEHEESTTKQCVAARALTRQEVRALQDGAELYEAVESAADPRDLESYFSEEQIRALSRHRQILNDKKQAQIQLEFRKAMESAGQGECGLSRDVTAVWKLRIITYDKKEKNSVLLSIWRPSSDLYSLLTEGKRYKIYHLTASKSKSRYEKANVQLAATKKTQYQQLSASDEILLHVYQPRELLHFSRLLDPDFQPACSEVDLIGLVVSVVKKTGRAPLVYLSDEYHNLLAIKFWIDINEDVIKPCVLIAASNLQWQPESKPGIPTLFAREMSVFSASPKEAHFQETFNKMKNTIENIDIFCTEAEEKLVHILNVNDPKCSTPAKEPYAAQTVLSTRSKPL</mol_seq> |
854 </sequence> | 1039 </sequence> |
855 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">cavia_porcellus</property> | 1040 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ochotona_princeps</property> |
1041 </clade> | |
1042 <clade branch_length="0.05149"> | |
1043 <name>ENSOCUG00000016878</name> | |
1044 <taxonomy> | |
1045 <id>9986</id> | |
1046 <scientific_name>Oryctolagus cuniculus</scientific_name> | |
1047 <common_name>Rabbit</common_name> | |
1048 </taxonomy> | |
1049 <sequence> | |
1050 <accession source="Ensembl">ENSOCUP00000014514</accession> | |
1051 <name>BRCA2-201</name> | |
1052 <location>GL018702:3042658-3113023</location> | |
1053 <mol_seq is_aligned="0">MPIGSKERPTLFDIFKMRCNTTVDLGPISLNWFEELSSEAPLYNSEPAEESECKINNCEPNLFKTPQRKLSYHQLASTPIIFKDQGPSLQLYQSPLKELDKYRSDSGKDTANNARKSCCTMKSKIDQANDVASPLINSYLSESPVLQYTNVTPQRKKSVVCGSLFHTPKLMKGQTQKHISESLGAEMDSDMSWSSSLATPPTLSSTVLIVRDEEASETVDTNAILKNHFSNDESMNKNGRFIPSVTESENKNQREARSQRLRKVLGNSFGKVNSCKDHFGKSMPNVLEDEVCESVANISEEDSFSFCFSEYKMENLKELKSEKTTEKNIYETKTDTYDEAEEQMKENKHSFAFEIEAKNSDPLDSNLTIQKPLESGNDKVSKELVQSEWSQLSVSGLNEIQIEKISMVHVSSCDQHNSEKDLIDTEKSCINFITPENSLSHISGLPKLEKILNEETVVHKRDERQHVESHDSILGAKPTTSEISPVVSPFQGIKKSLFKIRESAEETLGTVFLGDMSNSDLNETAEIPEREMETHAFYSQKENSLCESFVDDGSRPATVTHSSVTLKNASLISTLKKKTKKFIYAVKDEGKKIQEDQNSELTNCSAQFEANTLDVPLVFTNADSGLLHSSVRRNCLQVDSEEQTLSKTNSFGTILRKYSNDENSSNNAVTSQDLNYKEAKLNKEKLPSLITPETDYLSCLQERQREDNLKGQQVSNIRAKIVSSAYHPAIQHLEMECNSTYSQSQNGFLDNHDNTNTCILTPSSKDLASNSAVISGEKESYKMSEETKYRNCESDVELTKNSPIEKNQEMWGLSENFKKAELLPLEKHVIITSPPMKVQFNKITNLTVIQQDQEETTLISEITVNSNSEELFPDNENSFVFQRTNERNNPVSGNTEERNEIDLNYMEESNLQNSTMVVHEDIDDKQTTQVLIAKDSDSSNMVHDLIEENRNTVTQHLKMTLGQDLKSGIPLDIHMKSNGNNDYMDRWSGLLDPISNHSFGGSFRTASNKEIKLSEHKINKSKMLFKDIEEQYPTSLACVETLNTVSLDNQKKLRKPDIFDSQSNNAISAYMQNSAFVSDCENNHTATQVLSLKQDLNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHITQGDTFEVPENQMTILNTTSEECKDGNHHLSINVSSLGQVERSKKFEDAVGTEHKFACSLKNNCNKSATYLTDENEVVFRGFYSALGTRLNVSSEALQKAVKLFSDIESISQETSAEVYPRSFPSDKCHDSIASVIKVENHNNDQNLSEKNNKCQLISQNDSEVTPDVFGNENTENYKRNTEDEDNDRNKLRESDVSDSRKNYTVDIHTNENDLQCINQHAQFVKEENTQIKESLSDLTCLEVVKAEEIRHINTSNEEELTTDTTEQNVKAVGIFDISFQTAAGRNIKVSKESLNKVVNFFDKETEEELNNFSNCLKSKLLCDMNKNKVDFSSHEEPDIVKNKIFKESIPVSTENQLLIVQQQPECGIEKIKEPTLLGFHTASGKKVKITKESFDKVKNLFDEKQDSEIASFIHQGANTLKDMENCKEGLELALDAIEITVPKCEEIQNYLDCNDKNFAFSDTRLLPRLSDNLHRQTKSLRTNSISLKIKIHENTEKEALGNATGCFPNQSLTIENSDLAFYTGHGKEVSVSQASLFEAKKWLREGELEDQSEKNAAKKYPDSYVGNPSYENSSNSIITQSDKNPLSGKQDSPYLSNSVSNSYSCHSDEIHNHSEYPSKNKIASGLEPLVKNVDQNTKVIPSVREEATCPQTINEDTCDPKCVTDSSSCRNKEKAIRLTVSHSDNSKVGPPIFSTASGKTVCVSHEAIKKVKEILIDDYSEVIKPNTESKSDTSQTKTLTLLEDSKDIFPNSIENGGYNMYSHKVFADIENEQILQHNQSMSGLEKVSDMSPCHVSLKTSDVCNFNLGEHPQSVSYTNSGVFSTASGKSVHVSDASLQKAKEMFSETEDSAEQLFSKVSFKSKECSDQFTREENSMTDIPKNLLSSQKDFSNNVINSFAFSGFSTASGKQVSISESALQKVKGMLEEFDLIRTECSLQDSPTCKQSVSKVTPPPCVDKRTPEYSVNFKRGNTCSEKFELSGNSNSKSGSSENQCIKVSPYISEFKENEQQLVLGTRVPLVENTCPLRKKRASPKNVKMETGKTEIFSSPVRTNREVCFAYSKDPEKYFETEAVEIAKAFMEDGELTDSEALNCDKRSRFTYQKSEGMILLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIENQDKSLKASKSTPDGTMKDRRLFMHQISLEPITCGPFRTTKERQEMQHPHVTVPGQEFLSKSHFYEHLTLKKSSSSSSVSEQPFSKVPTTTNEKMRHSVTADKATKVFIPPFKTKSHFHRDEQCVSMDNNSEENKQNQKNIGEHGSDDNENKINDSEIHEFNKNNSKLAAAIIFAKYEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKTAVGSQIPSACSHKQLYMYGVSKHCIKINSKNAESFQFHAQDYFGKEDLWARKGIRLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISGVWVYNHYRWIIWKLAAMEFAFPKEFANRCLTPERVLLQLKYRYDIEIDRCRRSAIKKIMERDDTAAKTLVLCVSDITSSNTDTSENSSSKTSCVENKKVAIIELTDGWYPIKAQLDPPLFALLKSGRLTVGQKIIVHGAELVGPPEACSPLEAPDSLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGSVGCADVIIQRTYPIQWMEKTSSGFYIFRNEREEEKEAAKHAEVQQKKLEALFTKIQAEFEEHEESTAKQCTPSRALTRQQIRALQDGAELYEAVKSALDPGCLESYFSEEQLKALNHHRQMLNDKKQAQIQLEFRKAMESAGQGDQGLSRDVTAVWKLRIISYEKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKYERANIQLASTKKTQYQQLLASDEILLQVYQPREPLHFSRLLDPDFQPPYSEVDLMGFVVSVVKKIGGCAPLVYLSDENHNLLAIKFWIDINEDIIKPHMLIAASNLQWRPESKSGIPTLFARDVSVFSASPKEGHFQETFNKMKNSVANIVMFCNEAEKKLMHILNVNIPKCSTPTKEYTSEPYAAQTMLGIGSKFLMSSPVSDIIYPSPSSLCTPKGKSIPTSVSAQMTSKSCCKGEKEADDPKTCKKRRALDFLGRLPLPPHVSPICTFVSPAAQKAFQPPRSCGTKYETPVKKKELSSPQMTPLKKFSETSLLESDSIADEELALINTQALWSGSAGESQLVSESTRTVPTGSKGNPGPKRPSATALNKEREDHQAGTEECETTRKDTRTVKSLS</mol_seq> | |
1054 </sequence> | |
1055 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">oryctolagus_cuniculus</property> | |
856 </clade> | 1056 </clade> |
857 </clade> | 1057 </clade> |
858 </clade> | 1058 </clade> |
859 <clade branch_length="0.00151"> | 1059 </clade> |
860 <confidence type="bootstrap">47</confidence> | 1060 <clade branch_length="0.008883"> |
1061 <confidence type="bootstrap">12</confidence> | |
1062 <taxonomy> | |
1063 <scientific_name>Laurasiatheria</scientific_name> | |
1064 <id>314145</id> | |
1065 <common_name>Laurasiatherian mammals</common_name> | |
1066 </taxonomy> | |
1067 <clade branch_length="0.016879"> | |
1068 <confidence type="bootstrap">15</confidence> | |
861 <taxonomy> | 1069 <taxonomy> |
862 <id>314146</id> | 1070 <scientific_name>Insectivora</scientific_name> |
863 <scientific_name>Euarchontoglires</scientific_name> | 1071 <id>9362</id> |
1072 <common_name>Insectivore mammals</common_name> | |
864 </taxonomy> | 1073 </taxonomy> |
865 <clade branch_length="0.096277"> | 1074 <clade branch_length="0.118726"> |
866 <name>ENSTBEG00000015907</name> | 1075 <name>ENSEEUG00000009739</name> |
867 <taxonomy> | 1076 <taxonomy> |
868 <id>37347</id> | 1077 <id>9365</id> |
869 <scientific_name>Tupaia belangeri</scientific_name> | 1078 <scientific_name>Erinaceus europaeus</scientific_name> |
1079 <common_name>Hedgehog</common_name> | |
870 </taxonomy> | 1080 </taxonomy> |
871 <sequence> | 1081 <sequence> |
872 <accession source="Ensembl">ENSTBEP00000013856</accession> | 1082 <accession source="Ensembl">ENSEEUP00000008968</accession> |
873 <name>BRCA2-201</name> | 1083 <name>BRCA2-201</name> |
874 <location>GeneScaffold_2732:1286-173851</location> | 1084 <location>GeneScaffold_4361:961-62824</location> |
875 <mol_seq is_aligned="0">RDEETSETVFPNDTSAILKSYFSNHDESLKKNDRFIPSVKDNENKSQRETGSHGLEKILDNSFSEVNYSKDHFEESMTKILEDEVHDTVADISEEDSFSLCFSKYRTGNLQKVRTSKTRKKILPETKTHECEEAKKQRNENIYSFTSKMKPTDSAPLDANVTNQKPLGCGSDKISKEVLLSSASEWSQLKISELNRTQIEKISLLHSSSCDQNNSEKDLINIEKECINFSTSENSLPHISSLPKSEKILNEETVANKKDTRQYLESHGDSLLAVGQARSGTVITSPLQGIKKSIFRIRESPEETFSTVFTDDTTNSNFKETEASESGLQKYTVCSQKEDSLCPSSINGSWPVTATHTSVSLKSTGLISTLKKKTKKFIYAIKDEASYQGKIIQKDQQSELTNSPTHYEANAFETSLKIADSGLLPSVKRNCLQDDSEEPTLSVVNSFGTMLMKFSINKTSSNNPIIFQDLDCKKAKNNKEKLQSFIAPEADYLSCLLERQSKDDPKSQEVSDIKEKVLATTCHPTVYHSEVEHSGTHFQFQKSFLYDHDNTNPLTLTPSSEDPLSNTVVISREKESCKMSEKLKYKKCEASFELTKNMPVAKTEEMCALNENSEEAELLPPKKYIPIVPPSVKMQFNQNIILTIGKAQKETILRSEITGSLNSEELFPDNENSVFQVTKGRNNPVLGNTEELHEVDLSYIKEPILQNSAMVTCTDTDDKQPAQILITKDLDSSDTVCGLIGENNVKQNQKMTLGEDLKSDILDVDLKSNRKNDYMDKWSGLLDPVSNHSFGGSFRTASNKEIKLSEHNVTKSKMLFKDIEEQYPTSLACVEIVSTLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNFVEENTENYKRNTENKDSKYTGANRNTCNLGESDSSDSDKNNTVHKDKNDVASADQHNICLKLSNQVIKEGNSQSKESLSDLTCLEVVKAKETCHVNTSNIGQLTASKMEQNIKGFEIFDISFQTASGKNIRVSKESQNKVVNFFDQKPEEELNSCSLNSKLISGINKNKMDISNHEEIDLVKNETLKKGILVDTRNPLLTLQQQPKCETEMIKEPTLLSFLTASGKKVKIAKESLDKVKNLFDEKELDNSEIISFCHERAKTLKDKDVYKEGPEITCETAETTVPKHEGIQNSLDDDEKNLVFNETAVLPRLLSDHLYGQTENCKTANTSSLEVKVHETVEKETVNIPTTCYTKQPPYSTMENSALAFYTGHGRKISVSQMSLNEAKKWLREGELVDQPEKISTADYVGKLSHENSSNNIIAESEKKHLSKRQGLTYLYNSMSNSYSYRSDFCHSDELYNDSGYLSKSNIGSGIEAVMKDVKDKINTSISEVMSTVRETNTYSQTVNEDTCVQKLTDSSLCKNKNATTKLAISDSNNFEVGPPAFSTASGKIVCVSHEMIKKVKEIFSDNCSKILKQNTENDSGSCQACGDSENIFPNAIDDESSMCSHKIFVDIQSEVLQPNESKSGLEKVSEMSSCHVGLKTSDKCKFNIEKLPESVPFTNACGIFSTASGKSIHVSDVSLQKARQVFSEIEDNAKNNEHLDQFTREENTMTHTPECLSPKKGFSYNKINSSAFCGFSTASGKRVAVSESALHKVKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKDQENCFETEAVEIGAFMEDGELMDFSTDHAKRSFFTCQKYEEIDLLNSRIRKRRGTLVTVGEPPIKRNLLNEFDRIIENQEKYLKASKSTPDGTIKDRRLFMHHISLEPVTCGPFCASKEQKEIQKPNFTIPGQTFLSKSHFYEHLTLEGSSSNLSVSGQPLNKVSATRNEKIRHSITTDKPTKVFVPPFKPKSFHREEQCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTSLQNARDIQDTRIKKKQSQCVFPQPGSLYLTKTSTLPRISLKTAVGGRTPFARSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRIWVYNHYRWIVWKLAAMEFSFPKEFANRCLSPERVLVQLKYRYDIEIDGSRRSAIKKIMERDDTAAKTLVLCVCDIISSSTNISEISSSKTSSVDTKKVATIELTDGWYAVKAQLDPPLLALVKNGKLTIGQKIITHGAELVGSSVACTPLEAPESLMLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYAEAQQKKLEDLLTKIQADFEAHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESSEQGIQGLSRDVTAVWKLRVTSYGQKEKDSVILSIWRPSSDLYSLLTEGKRFRIYHLATSKSKSKSERASIQLAATRKTQYQQLSASDEILLQVYQPRELLHFDRLLDPDFQPPCSEVDLIGFVVSVVKKIGLTSLVYVSDECHNLLAIKFWVDLNEDIIKPHLLIAASNLQWRPQLKSGIPTLFAGDFSMFSSSPKENHFKERFNKMKNTVENIDTFCSEAENKLMCILNANDPKWSTPTKGYTSEPIIATGNKFMMSSPNSEINYRSPLSHCTPVEKSVLTPGSAHMTSKSCKGEKEIEDPKDCKKRRALDFLSRLPLPPPISPICTFVSPAAKKAFQPPRSCSTKYETPIKKKEFNSPEMTPVKKYNEICLLESNSIADEELALINTQGLLSGSAGENHLTSPGESSQTAPTSSEDYLRLKRQDTTSLTKGQENSQTSTQKNEAKMEDISTKKYI</mol_seq> | 1085 <mol_seq is_aligned="0">MPVGCKERPTFFEIFKRRCNEADLGPISLNWFKELSSEAQPYNFEPAEESEYKAVSYEPTLFKTPQRKPQMVSTPVIFKEQNQPLCTSPSKELDKYRLNLGKDITNSKHKSYCTTKTKMDQACEIASPSLNSYLSESPVLRYTHGTPQREKSMICGSLFHTPRFMKGQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLIERDEEASAAVYPNDTTAILKSCFFNYDESLQKNGRFVHSGLENESKNLGESESHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLHSSVNNSEETTLFSANSLGMNLRKCSSNKTFSGNKIVSQDLDSKGEKIKKEKLHSYIATATDVSNLQQRHCADNPKNRVSDAEEKVLPSASHPAMPHSKVEYKDDHFQSQERLLYDHGSFSTLVPTAMVPPSSPAVNFRANESYKISKKLQNKEREAGVEVTTNTPMKKNEKKCVLNENFKKAEQLPPEQYRPLSPSVKVQVTQSSSLTLIQNDQEETLISNVIVNSNPEELFPESENSFHITGERSVPVLENIEELYVADLSSIKEPISENDTMVAFTDIVNKQEAKVLITKDFESSDVVHDVTEKRNSVKQKLNMTTSQDSKLDIFLDTNVNSDGSSEHMDRQTGLSNVISNHSFGNGFRTASNKKIKLSENNIKKSKMLFKDIEEQYPPNLACTEIVNNLGIQEKLSKPHGLDSQSTNTVSGCVQNGILVSTSENTHAVPPILSLKQDPNLNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHTQRNNQFEKPEKQMTVVNTSSEEWKDTGHLTVNAPSTNQVNSKKLESAAEGKQMFPCLLKTSYNKSPNSNYSTDKNKTEFRGFYSALGTKLNVSTTALQKAMKLFSDIDNISEEASAELDPGILFSDKYKDSVVSASKIENYNDENLNKQLTFQNSTGMTTGIFAIDNTDRCKRDKESEDNKHTCASRNICNIGEPDGNDSSTNDRVYIHKGENDLPHSDQHNAVLKLPSLLMMEDNTQIEGLSDLTCLEVVKAEETFCVNSSNKEQLTSKMGQNTKDPGIFHLSFHTASGKNIRVSKESLSKVVHFFDEKYTEEELNSFSENMDADFISDINMNKTDILSHVETDMVKDKILIGHDPNNTKNHLLTLQQQPECEKRMINEPTILGFHTASGKEVKVAKDSSEKVKNLFDEKKKGSTSEISNIKCPAAAAVGERDDCKERLELACEAAGITVTKYKHVQKSLEEKKVISHEISDNLHTQAENLRTPNNISPKVKQCETIEMDTVRTSTCSTIENSTIAFYTGHGRKISVTQVSLLKAKKWLHEGESNDEPEEENAVNYVGNPLSRNSSKSILTENQLSEKQDSTYLSNRKMYNRYLYHSDFCHSNEAHSKSEYLSENEIGNSDIEPVLENVKARENSSSSEIITVREGSTYPQTVNEDMCVLKLNSSSPCINKSTANQLTVSDLKTFEIGPPSGKTDFAAHEKERLTDSCSKVINQNIDNKPGSYQTNFVADYHKALGDVNDISPKECSVHSLKVFADSQDKQVLQHNQSMPELEKVPEIPPCKFNLKLYMCKFNMVKFSKSVSSTNTGGIFSTASGKSVQVSDAALQKARKVFSKLEEDSADQLLSKESLKNSEHSDNLTRDKSTVVHTPQSKSSTICGFSTASGKQVSISKSALNKVKGMLEEFDLIGAECSLRHSPTSGQDILKISLSCNDKSTPEHSVNSKTEKACNKEFKLSSNCNIRSDSSEDTHFTDVSPYLSPFKQDKQQLELGTTISVIEKNSHPLEKEQALPQNTKIELSKTETYLPQKANTEVCSAYSKDPENYFETEAVEIAKAFMEDGELTDSELLSHDKHSSFTCNEHEEAGTQNSGSGKRKRDALVSVGEPPIKRNLLNEFDRIIENERKSLKASKSTPQXXXXXXXXXXXXXXXXXXXXXXXXTPDGEKQSPNFTAPTQEFPSKSHFCELLTVEKSSSNLGISEQPFHNAPARNERRHSITTSKLMKVFVPPFKTKAHFHRTEESDLEENKNEPKSTNEHRSGDSENNINESEIHQLNKNDSSQTTTLIFTKCEEPLDLITALENARDMQDIRIKEKQKQHIYPQPGSLYLTKTSTMPRISLKTAVGGQVPSVHSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVNPNLISRLWVYNHYRWIIWKLAALEFAFPKEFANRCLTPERVLLQLKYRYDVEIDKSRRSAIRKIMERDDTAAKTLVLCVSQIISSSTNISETSSSKTSSIGAKNVTTIELTDGWYAIKAQLDLPLLALIKNGRLTVGQKIIVHGAELVGSPDACTPLEAPDSLMLKISANSTRPACWYAKLGFFLDPRPFPLPMYSLFSDGGNVGCVDVIIQRVYPIQWVEKTSSGLYIFRSEREEEKEAAKFAEAQQKKLEAIFTKIQAEFEAHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSEEQFRALNNHRQMLNDKKYTQMQLEFRKAMESAEQDKQILSRDVKMVWKLRIVTYGKKEDSVILSIWHPLSDLYSSLTEGKRYRIYYLATSHSKSKSERASVQLTATKKTQYQQLPASDEFLFQVYQPRESLHFNKLLDPDFQPPCSEVDLVGFVVSIVKKKGLAPLIYLSDECHNLLAIKFWIDLNEDIIKPHTLITASNLQWRAEAPSRMPTLLAGDFSIFSASPKEGHFQEAFHKMNTIEDIDTFCSEAENKLMYILNANDLKWSTPTKDYTSERHTTQTILDTGNKFLLSPANSGMNHQSPLPLCKSKGKSVSIPMSAQRTPQKETDDPKHCRKRKALDFLSRLPLPPPVSPVCTFVSPAAQKAFQPPRRCGTKYEMPVRKKESNSLQVNPLKNLNISLSESDSIADEELALINTQALLSDSGGENQLLSISERTKTIATSSKGNRLKRHYTSPVSKKQENSQASEEEQKTSVQDTSIKKHI</mol_seq> |
876 </sequence> | 1086 </sequence> |
877 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tupaia_belangeri</property> | 1087 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">erinaceus_europaeus</property> |
878 </clade> | 1088 </clade> |
879 <clade branch_length="0.005621"> | 1089 <clade branch_length="0.130045"> |
880 <confidence type="bootstrap">63</confidence> | 1090 <name>ENSSARG00000002755</name> |
881 <taxonomy> | 1091 <taxonomy> |
882 <id>9443</id> | 1092 <id>42254</id> |
883 <scientific_name>Primates</scientific_name> | 1093 <scientific_name>Sorex araneus</scientific_name> |
1094 <common_name>Shrew</common_name> | |
884 </taxonomy> | 1095 </taxonomy> |
885 <clade branch_length="0.018724"> | 1096 <sequence> |
886 <confidence type="bootstrap">100</confidence> | 1097 <accession source="Ensembl">ENSSARP00000002541</accession> |
1098 <name>BRCA2-201</name> | |
1099 <location>GeneScaffold_591:245736-329655</location> | |
1100 <mol_seq is_aligned="0">MPVGCKERPSFWEIFQTRCNQADLGPISLNWFEELSLEAPPYNSEIIFPVEESEYKTNSHEPSLFKTPQRKPYQLASTPIIFKEQGLNLPLNQSPSRELHKYRLLLGKDNKHQGYCTVKTKLNHTNEVTSPLPNTCLNESPVGLHCTHVTPQREKSVVCGSLFHTPKLIKGQTPRRISESLGAEVDSDMSWSSSLATPPTLSSTVLIVKEEESRTAVFPNDTAAVLKSYFSNYDECLRKNNRIISSGPINESSQKETTSQELGEIQDNSSWKVNNHKDQFGKSVPNVLKDEIHETVSDVSEEDSFSLYVSKYKTRNLRKIKIGKSRKNIFSESNMNEYEEPKQQLEKNKHLFVSEVEPNYNIPSNTSVTTQKLFGNGSDEISKETVLSSGSQRVQLTPSGENGIQMKKMPTLYTSSCGQSNSAKDCIDTEKDCTSFIILENLLPEILDTSKTENVVDEETVVNKGDVGHCLISHEDSTPVTKPTVANTSLVESPHEGIKKSVFRIRESTEEPLSEVFSNNITDPNFKEETKDSEKELEVNAICLQKEDSLCPNLVDNGSQPASIEHTSAALKSEGLISTLKKKKKKFIYAINDETTCQGEKLLKDRASQLSNYSTQFEANTFEVPLTVTNTDSGLMPFSSKKITEEPAFSLNSSYEVNLRKCSSNESSSSKTKRLPQVLDDKKLQSCIITEAAYFSSLQEQHCMDNPKSHSVSDIKEDFPITYHPGAPNSEVDCSSMLFPSQERFLYDHGNTSILTPNPRAIPSKPAMVSIVKKSNKMPEKLKSKNCEADFELTNNIPMEMSRLCVFSENSQKTELLISKNDITASSIEIQVNENPDSTVIQKDQEETTLISNITINSNSEELFPEYGNNFVFQMTNERKIPALENIEEPYEADLSCVEESILKNSTLIAYGDLDDKQTAKVLIAEDFSSSVIHDFTENINSIKQQVSRTLGQDSESDILNIEVKSNRNNEYVDKQTVSSAPVLDQNFGKGFRTASNKEIKLSEHNVQKSKMLFRDIEEQYPTSFACAEITNTLSSDVEKKQSKPLVLDSQSNNNVSRYVQNSAFASSSKNSHKIPPVLSLKLCLSSNNNLTPSQKAEVNELSTILEESGSQFEFTQFRDPDHIEQNYPLEASENHMILSSTTCEECKDSHHDALNSPSTSQVNSKKYKDTFGDKQNFAHLLKTSCTKNASGCLTDKEVEFKGFYSALGSKLTVSNKALQKAMKLFSDIEKISEETSAELDSESLFSSKYGSIRTENYTSDNINTENKCQLILQNNVEMTTDIFVENTKDYKREKENEDRYIGASINICNIGKSHCSDTSKNDTDSNKNDFPCNNQRNKCLKLSGPCMKEGSIQIKEGLSDLTCLEVVKTEELFYINTSSKEQLTVKKMVPNTKDFYSCDVYFQTASGKNITVSKESLSKVVNLFDEKCTEEESDNLPSSLNSELFSTKHMKKSISSHEETAKIEDKILKEKEPVGNKNQLTLQEQAERETEKSKEPFILGFHTASGKKVKVAKESLDKVKNLFDEEKQCIGEIINTNHEGLKTLKDREEPEVTCETIEIIVPKCEEREKSPEEKRLIPNETAVPPGLLSDHLHTQRENLKISNSISLKVKAHEDTEKQQAEVPITCSTNQSTCSVTGNSTLAFYTGHGRKISVSQASLFEAKKCLREGKLDDQPEAINAAGYVGSPLSENSSSCILTGKSHLSGRKDSAYLSKRSMSNSSSYSESSHSNEVYSKSELLSKNKVDHSGIEPVMKDAKDEKDSSFPEVVSTLREANIYPQTVNGDIYAKKLSNCSPCNNKDAANKLAFSDYFETESPSADGEKDFVSHDTEEIRERLVDSYSKVIKQNSASTSGTCQTKIVAGCHEVLDDLKDPLFSKSLDEECNMHSHKVFTDDQSEQSLQQNQNKSELEKVSKKSPCQLNWKTSDICKLNVGNFSSSVSFKNACGIFSTASGKAVQVSDASLQKARQVFSKVEDNADQPFSEVFKNNREHSDKYTKEKSTVIHSASKSLPAFSGFSTASGRKVSISESALNKVKGMLEEFDSIRTECGLQHSPPSRPDASEILPFSYVAKNTSEDLVNTTMESAYRNKFNHSDNYSIESDSSENSHLTTVLPSLSEFKQDKQQLILGIKASVVENIHCLGEKAIPESTERKIDKTETFSNLPVKTTTELRSTYSGDPGNYLETEAVAIADAFMEDGELTDSELLCHAKHEETISLNSSIGKRRGDASVSVGEPPIKRNLLNEFDRVMEKQEKSLKALKSTPEGTMKDRRLCMHHVSLEPITCGPPCATKKLQEKQSPNFTAPGQEFMSKSQFYEFNLTLEKSSNLSVSEKLFYEVPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYMFGISKHCLKINIKNAESFQFHIQDYFGKKDLWAEKGIQLADGGYLIPSNDGKAGKEEFYRALCDTPGVDPKLISRLWVYNHYKWIIWKLAAMEFAFPEEFANRCLSPERVLLQLKYRYDMEIDRNRRSAIKKIMEKDDTAAKTLILCVSGITSSGTNIPEASTSKNNSVDTKTVTLIELTDGWYAIKAQLDPPLLALLKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARKRCIPSHALTRQQIHALQDGAELYEAVKNAPDPGDLEGYFTEEQLKALNNHRQILNDKKQAQIQLEFKKAMESTEQEEQILSRDVKTVWKLRIISYEKKEKDSVLLSIWRPSSDLYSLLTEGKRYRIYQLITSKSKSKSERTKMQLTATKKTQYQQLMTSDELLFQVYQPRTSVPFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLLPLVYLSDECHNLLAVKFWIDVNEDIIKPRMLIAASNLQWRPESKSRIPTLFAGDFSMFSANPREEHFQETFHKVKNSVENIDVFCSDAENKLMHMLNADDPKWSTPTKDYTSEPHTVQPVLDTGSKCLMSPISYQSPLLLCKTKGKSVSTPVSAQMTSKFCCQKETDDPKTCKKRRALDFLSRLPLPPPVSPMCTFVSPAAQKAFQPPRRCGIKLNETPIKKLSLNSPQMTPLKKFNDSSFLESDSIADEELALINTQALVSGPAENQLMSTKSARTAPSCSKESLRLKRHHTATAVKDQEDSCDSMEERDISAKKYF</mol_seq> | |
1101 </sequence> | |
1102 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sorex_araneus</property> | |
1103 </clade> | |
1104 </clade> | |
1105 <clade branch_length="0.00438"> | |
1106 <confidence type="bootstrap">9</confidence> | |
1107 <taxonomy> | |
1108 <scientific_name>Laurasiatheria</scientific_name> | |
1109 <id>314145</id> | |
1110 <common_name>Laurasiatherian mammals</common_name> | |
1111 </taxonomy> | |
1112 <clade branch_length="0.000399"> | |
1113 <confidence type="bootstrap">5</confidence> | |
1114 <taxonomy> | |
1115 <scientific_name>Laurasiatheria</scientific_name> | |
1116 <id>314145</id> | |
1117 <common_name>Laurasiatherian mammals</common_name> | |
1118 </taxonomy> | |
1119 <clade branch_length="0.000202"> | |
1120 <confidence type="bootstrap">5</confidence> | |
887 <taxonomy> | 1121 <taxonomy> |
888 <id>376911</id> | 1122 <scientific_name>Laurasiatheria</scientific_name> |
889 <scientific_name>Strepsirrhini</scientific_name> | 1123 <id>314145</id> |
1124 <common_name>Laurasiatherian mammals</common_name> | |
890 </taxonomy> | 1125 </taxonomy> |
891 <clade branch_length="0.07109"> | 1126 <clade branch_length="0.04771"> |
892 <name>ENSOGAG00000010588</name> | 1127 <name>ENSECAG00000014890</name> |
893 <taxonomy> | 1128 <taxonomy> |
894 <id>30611</id> | 1129 <id>9796</id> |
895 <scientific_name>Otolemur garnettii</scientific_name> | 1130 <scientific_name>Equus caballus</scientific_name> |
1131 <common_name>Horse</common_name> | |
896 </taxonomy> | 1132 </taxonomy> |
897 <sequence> | 1133 <sequence> |
898 <accession source="Ensembl">ENSOGAP00000009477</accession> | 1134 <accession source="Ensembl">ENSECAP00000013146</accession> |
899 <name>BRCA2-201</name> | 1135 <name>BRCA2-201</name> |
900 <location>GL873639.1:315573-415772</location> | 1136 <location>17:11512132-11574407</location> |
901 <mol_seq is_aligned="0">MSVGSKERPTFFEIFKTRCNEADLGPISLNWFEELSSEATPFSSEPVEESEYKIISYESHVFKTPQRKPFYRQLASTPLIFKEQGPTLPLFQSPVKELDKCKLDLGNNIANSKHKSHHTGNAKMDQAGDVTSPLLSSRLSESPVLQYTHVTPQREKSVVCGSLFHTPKFVKGQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRSEDASEIVFPNDTTAILKSYFSNRDESLKENDRLISSVTDHENKNEREARSCGLGKILGNSFDEVNSCKEYFGKSVPNILEDKVRKAIADTSEEDSFSLCFKYKTRNLRKVRKDNTRKKVFHETKTGEYEEAKKQIKEKHSIISEMEPNDSDLLDSNEAKQKPFGNESDKISKEIVESCASEWSHLTLSGLSGTQMEKISPLHISCNQNNSEKDLVDTEKECTDFITSENSLPCISNIPKPEKILNEKTVVNKGGEPQHLESYEDSILAVKPAISGIPRTASLFQDINKPIFKIRESSEETSSAVFMGSMTDPNVKEETETSESNLEIYTICSQKEDSLCPSSIDDESRLATIAHTSVPLKNTGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNCSAQFESNVFQAPLSFTNDNSGLLNSSVKRNCLQNDSEEPALSLTSSCGTLLRKCCHNKSNSPNNPVISQDFDYKEAKINEEKLQPFITSEMDYLSCQQERQCENDPKSENVSAIKEKVLATACYPVVHHSEVECSGMHIQSQKSLLYNHDNTSTLTLSSKDPWSESVVISSKKESYKMSEKERRKSCKVGFELTKNIFAEKNQEVCSLNENSKNAEPLLPENYITASPSVKVQFNQNKNLSMIQKEETTLISKILDNPNSEELFQDNENFVCQVTNGRNNLILGNSKELPEADLSCVKEPFLENSTMVVHADVGDRQAVQVLITKELDSSDTVYDFPEENRNSVKQHLKVTLDQDLKPDTSLVIDKKSNKNDCMDKQAGLLNPISNHNFGGGFRTASNKEIKFSEHNIKKSKMLFKDIEEQYPASLICVESINALELRNQKKLSKPHMLVSESINTVSSYVQSSPFVSNSENNQTPPQMLFSKQNFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPNLIMQSNTFDVPANQMSLLNTTSEERKDVDLNVSSVGQVETSKKFEGAVQVKQKFTCLSENNCNKSASGYLTCENEVEFRGFYSARGKKLNVSSEALQKAVKLFGDIENISEETSTEVDPRSFSSSKCNDSIVSAFKIESHNNTNLNEKNNKCQLVLQNIEMTTDAFVDKSTENCKRNIIENDNKCVAANRKTCNLGESDSSDSGKNDTIYIHKDANDLPCTDQHNVYFKLPSQFVKEGNTQMKASLSDLTCLEIVKEEETCYVDTSNKEQLNASHMDQNRKDFEVFDISFQTASGKNIKVSKESLNKVVNFFDPKTEEELNNFFLNSKLLSGISKNKVDILSHEEIDMFKNEILKESISIDTQNQLSTLQQQPECENKKIKQATLLSFHTASGKKVKVAKESLEKVRNLFDEEKQAISKISLNSQRAKIQKDRGERTCKEGLVLACKTVEITTVPKCEEMNSLGDNVENHVSNPTAVLPKPLSDHFYRQSENISTPNVSLKVKVCENVEKETAKSPATCYTNQSPYSAVENSALAFYTGHGRKISVSQASLFKAKKWLREELGDQPEEINSDKNYVGNPSHGSGSNSIITENGKNHLPEKQDSAYLSFSSMSNYSYHSDFYCSHDSGYLSKNTTDSSIEPVVKNIEDERNINFSEVTSTVREANAYPQTVHKDTCIQKLVTNSSLCTNENTAFKLSVSNSDNFEVETPAFSTASGKIVHVSRETIKKVKEIFTDNCSKVIQMDTKSKSSTCQTRIVSDYYKTLDDSEDSLPNSTDEESSMHSHKIFADIQNVHILRDQSMLGLDKVSTLSPCDVSLKTSSLCNTGKFPELVSSTNPEIFSTASGKSIQVSESSLQQARQVFSEIEEHAKQHFSKVSFKNNEEYSDQFTREEKVIHVPQKLISQKGFSCNVVNSPAFSGFSTASGKQVSVSESALHKVKGMLEEFDLIKTDCTLQHPPTSRPGISKFPSLPCVDKRTAEYSMNSEMKKAYSTEFKLLNNFNIESNTSENNHSIKVPPYMSQFKQDKQQLVLGTKVSLVENIHILGKEQALPKNIKMGIGKTETFPDVPMKTNIEVSSTYYKDSENYFETEAVEIAKAFMEDGELTDSEPLSHAEHTRFTCQENEETVWLNSRIGKRRGDNHVSFGEPSIKRNLLNEFDRILENQEKSLKVSKSTPDGTMKDRRLFMQHVYLEPITCGPFCTTKKRQGIQNPNFTAPGQEFLSKSHFYEHLTSENSSSNLSVLGQPFYKVPATRSKEMRHSISTGKSTKIFVPPFKTKSHFHRDKQCASNTVVEENKQKQNTDEHDSGDSENNNSEIHQLNKNNSNQACEEEPLDLITSLQNARDTQDMRIKKKQRHHISPQPGSLYLAKTSSLPRISLKAAVGGRVPSACSHKQLYMYGVSKHCIKINSKNAESFQFHIQDYFGKEYLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDLEIDRSRRSALKKIMEKDDTAAKTLVLCVSDIISLSANICETSNSKTNSEDTKKVSVIELTDGWYAVKALLDPPLLALLKNGRLSVGQKIIIHGAELLGSPEACTPLEAPQSLMLKISANSTRPARWYTKLGFFPDPRPFPLRLSSLFSDGGNVGCADIIIQRTYPIQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQKRLEALFTKIQAEFEEREDNNNNNFLPFSNVATWTVPVRRYRDVCFLFQYVKWSQCYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQGLSRDVTTVWKLRIISCAKEETDSVTLSIWCPSTELYSLLTEGKRYRIYHLAASKSKIKSEKANIQLAATKKTQYQELPASDEILFQVYQPREPLHFNRLLDPDFQPPCCEVDLIGVVVSVVKKTVLGLAPLVYLSDECHNLLAIKFWIDLNEDIIKLHALIAASNLLWRPESKSGIPTLFAGDFSMFSASPKESHFQETFNKMRNTIENIDIFCKDAENKLIHMLNASDPKWCTPTKDSTSELHTAQTVLGTGNKFLISSPNSEINYQSPSSLCTPKVKLVSTPISAQMTSKSCCKGEKAIDDPKSCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSIVTKYETPIKKKELNSPQMPSPKKFIEISPLESNLIADEELALINTQALLSSSAGEDQCVSISEPPGTTTTNSKDYLRLKRHCTTSLNKEPKNPQVSTEDCATNMQDTSIIKDIS</mol_seq> | 1137 <mol_seq is_aligned="0">MPIGCKERPSFFDIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEYKINSYEPNLFKTPQRKPYHHLASTPIIFKEQSLTLPLYQSPLKESDKYRLDLGKNIVFSKSKSCCTMKAKMDQANDVTSPPLNSCLSESPVVLRCTHVTPQREKLVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIARDEEASATVFPNDTTSILKSYFSNHDGSLNKNDRVNPSGPDKENKNQREAKSHELREMLRNSFGKVNSCKDHFGESTPNVLQDKVHETVADISEEDSFSLCVSKYKTRNLQKRKIGKSRKNIFNETETDEFEEVEKQMKENKHSFVFEMEPNDSDPLDASVTNQKPFGNVSHKISKEVVPSSASGWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDIIGTEKECTNLITLENSVPRISCVPKTEKKLNEETVINKRDEGQCLESHEDSILVVKQAISETSLIASSLQDIKKSIFRVREIPEETFSAVFSNNMTDPNFKEKPEASESGLEINTLYSQKEDSLCTSSVDHGSWPATIKHTSIALKNAGLISTLKKKPKKFIYAISDEISYQGLKIQKDQESGPTNCSTQLEANTFETPVTFINSDSGLLHSSVKKNCLQNDSEEPTLSLTSFSGTVLRRCSNNESSSSNNKIISQDLDCKEAKINKEKLQSFITTETDCLSCLQEKHCEDDSKGQRVSDTKEKVLPAVCHPGMPHSEVECSDTCFQFQESFLYDHDNTSILTPSSKDPPSNLVVISGIKESYKMSEKLKFKNCETDFEFTKSIPMEKNQEIGVLNENSEKAELLSPEKYITVASSSMKAQVSQNTNLTIIKKKQEETTLISKITVNPNSEELFPDNENNFVFQIANERNIPALENTKELHEADLSCVEEPIIKNSTMVVCTNIDDKQAAEVSITKDLDSLDTVRDLTETNRNSVKQQLEMTVGQDSKSDISLDIDMKSNRNDDCMDKWTGLSDPISNHSFGHGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTSLACVEIVNTLSLENQEKLSKPHSINIVPRYKHSSAFVSDSENSHTTPPILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPRHIIQNNPFEMPENQVTVLNTTSEEWKDVDHPTVNTPSVSQVDSSKKYESIVRGKQKFACLLKTNCNKNASGYLADKNDLEFRGFYSARGTKLNVSSGALQKAMKLFSDVETISEEPSAEVDPRSISLSKCNDSVVSMFKIENYNDKDLNEKNNKCQPILKNSIEVTTGIFVENTEDYKRNAENEDNKCTETSRNICNLGEFDGDESSKNDTVYIHEDESGLPCIDQHNIYLKLPGQFMKEERTQIKEGLSDLTCLEVVKAEETFHVNTSNKEQLTANKMGQNIKDFDIFDLSFQTASGKNIRVSKESLNKVVNFFDQKYTEKELYNFSDSLNSELLSGININKIDVSSCEETDMVKDKILKERNPVDTENQLLTLQQGSECEIEKIKELAMLGFHTASGKKVKIAKESLDKVRNLFDEQNQNSNSEITNFSHRGAKPLKDREECKGLELGCETVEITAPKYEEMQNSLEEEKLVSSEIALSPRLLSDDLYKQTENLKTSNNISLKVKVHENLGKETAKSPTTCYTNQSTCLDVENSALTFYTGCGRKISVSQTSLFEAKKWLREGELDDESEKIRYLQDYVGNPSCRNHSNGIITGNYKNHLSEKEDSTYLSNSSMSNSCLYHSDFCHSNEVYNKSESLSKSKTDNSGIEPVVKNVKDRKNTSFSEVISTIREANSYPQTVNEDICVQKLVPNSSPCKNKNTAIKVTTSDSNNFETGVPAFSTASGKIVFASHETKVRGRFTDNGSKIIKQNTESKSGTCQTKIVASSHKALDDSEVVIFSNSPDTEEHSMCSNKVFAEIQSEQILQHNQNISGLEKVSEISPCQINLKTSNICKFDMGKLPKSIASVNACGIFSTASGKSVQVSDAALQKARQVFSKIEDGDNQLFSKVSLKNNKEHSDKFTREENTMIHSPQNLLSSAFSGFSTASGKQVPVSESALCKVKGMLEEFDIIRTECSHQHSPTCEQDKLKILPLSCIDKRTPEHSVNSKTEKAYSKEFKLSSKYIIESGSSENSCSVKVSPYLPQFKQDKQQLGLGAKVSLVENIHLLGKEQALPKNVKMEIGETNLPVKTNTEVCSTYSKDPENCFETEAVEIAKAFMEDGELTDSELLSNTKHSLFTCQNNEEMISLNSRTGKRRGDALVSVGEPPIKRDLLNEFDRIMENQEKSLTASKSTPDGTIKDRRLFMHHISLEPVTCGPFCTTKERQEIQKPNFTAPGQEFLYNSHFYEHLTLEKSSSNLSVSGQPFYKAPATRNEKRRHSLTTGKPRKIFVPPFKTKSHFHRDECCVSRNTQLEENKLNQKNIDEHGSGDRENNINDGETCQLNKSSSNQAATMIFTKWEEEPLDLITNLQNARDTQDMRIKKKQKQHIFPQPGSLYLAKTSSVPRISLKAAVGGHVPSAYSHKQLYMFGVSKHCVKINSKNAGSFQFLTQDYFGKEALLAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIVWKLAAMEFAFPKEFANRCLTPERVLLQLNQLYDIEIDRSRRSAIKKIMERDDTAAKRLVLCVSEIISSSTDISETSSSKTRSVDTKKADIIELTDGWYAIKAHLDPPLLALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFFPDPRPFPLPLSSLFSDGGSVGCVDVIIQRAYPIQWVEKTSAGSYIFRNEREEEKEAIKYAEAQQKKLEALFTKIQVEFEEHEESIAKQCTPSRALTRQQVRALQDGAELYEAVKSAPDPSYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAVESSGQGEQILSRDVTTVWKLRIISYEKKQKDSVLLSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSRSERANIHLTATKKTRYQQLPASDEILFQVYQPREPLHFNKLLNPDFQPPCSEVDVIGFVVSVVKKIGLSPLVYLSDECHNFLAIKFWIDLNEDFIKPHMLIVASNLQWRPESNSGIPTLFAGDFSTFSASPKEGHFQETFHKMKNTMENIDIFCNDAENKLMHVLNANDAKWSTPTKDYTSEPHTAQTVLGMGNKFLMSSPNSEMNYQSPLSLCKPKGKSVSTPLSAPMTLKSCKEEMEIDDPKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKGLNSPEMTPLKKVNDISLLEGDSIADEELALINTQALLSGSAGENQLMSISESTRTTPTCSQDCLGLKRHCSTSVVKEQEKSQVSTKERETNTQDTRTVK</mol_seq> |
902 </sequence> | 1138 </sequence> |
903 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">otolemur_garnettii</property> | 1139 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">equus_caballus</property> |
904 </clade> | 1140 </clade> |
905 <clade branch_length="0.039893"> | 1141 <clade branch_length="0.015048"> |
906 <name>ENSMICG00000011994</name> | 1142 <confidence type="bootstrap">2</confidence> |
907 <taxonomy> | 1143 <taxonomy> |
908 <id>30608</id> | 1144 <scientific_name>Cetartiodactyla</scientific_name> |
909 <scientific_name>Microcebus murinus</scientific_name> | 1145 <id>91561</id> |
1146 <common_name>Cetaceans and Even-toed ungulates</common_name> | |
910 </taxonomy> | 1147 </taxonomy> |
911 <sequence> | 1148 <clade branch_length="0.004237"> |
912 <accession source="Ensembl">ENSMICP00000010933</accession> | 1149 <confidence type="duplication_confidence_score">0.2500</confidence> |
913 <name>BRCA2-201</name> | |
914 <location>GeneScaffold_1468:1090539-1158098</location> | |
915 <mol_seq is_aligned="0">LGPISLNWFDELSSEAPPYNSEPAEESEYKISSYEPHLFKTPQRKPSYRQLASTPIIFKEQGPTLSLYQSPVKELDKCRLDLGNNVANSKHKSRHTVKAKMDQADAVTSPLLNSCLSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRGEDASEIVPNDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKMLGNSFDKANSCKDHFGKSIPNALEDEVHEAVADISEEDSFSLCYSKYRTENLKKVRTGKTRKKVFHETKTGEYEEPKKQLKEKHSFASEMKPKDSDPLDSNVAKQKPFGNGSDKISKEVLESSACEWSQLTLSDNLSRTQMEKIPLLHISSCDQNNSEKDLVDSEKEYTNFITSENSLPHISSLPKPEKMLNVETVVNKGDESHEDSILVVKQISRIPSIASPFQGIKKSIFRIRESPEKTFSAVFSGNMTDPNLKEKSGTSESQLELYAICSQKEDSLCPSSIDKSWQATITDTSVPLKNAGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNYSAQFEANVFQAPRTFTNVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANKNDYMDEWVGPLYPVSNHTFGGSFRTASNKEIKFSEHNIKKSKLLFKDIEEQYPTSLNCVEIINTLALDNQKKLSKGHEFVSQSVNTVSACAQSSPFVSNCENSDIPPQMLDFNSNNNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIIPNNTFEVPANKMTVLNTTEEWKDVDLNVTINASSIGQVDNSKKFEGVVGVKQKFTYLLENNCNKSVSGYLTGENEVEFRGFYSALGKKLNVSSEAMQKAVKVFSDIENINEEPSIEVDPRSFSSSNYNDSVVSMFKIENHNNDKNLNEKNKCQLILQNNIEMTTGTFVEENIENYKRNTESENNKCTATSRNTCNIESDGHDSNKNDIVYIHEDANDLPGTDQHNLKLSSQFMKEGNTEIKENLSDLTCLEIVKAGEACHVDTSHKQLTASKIEQNIKDLGIFDISFQTASGKNISISKESLNKVNFFDQKTEEELNNFSLNSKLLSGISKNEVDILRNKETDMFENKILKESIPVGTGIQLATLQQQPECEIEKIKEAMLLSFHTASGKKVNIAKESLEKVKNLFDEKKQYIDEITSFSQGLKIQKDRGDCKEGLILACETVEITTVPKCEEMQNSLDDNEKNQVSNTVLPGPFSDHLHRQSENLKTSNDISLKVKVHENVEKETAKSPTICYTNQSPYSAIENSALAFYTGHGRRISVSEASLFEAKKWLREGELGDQLEKINTANYGGNPSQESASNSIITENDKNHLSEEQDSTYLGNSNLSNNYSCHSNSCYSHEVYNDSGYLSKNIIDSGIEPVVKNIEDKENSSFSEIISIVKEANAYPQTVHEDTCVQTLVTNSSLCKDENTSTKLSVSNSNNFEVGPPAFSTASGKIVCVSHETIKKVKELFTDNGSKVIQPNTESKSGACQTKIGAGHYKALNDSEDIIFSNSDKVVDEECCMHSHKVFADIQSEQLLHDQSMSGLEKVSKKAPCNSSLKTSSICKFNTGELPKSVSSTNACGIFSTASGKSIQVSDASLQKARQVFSEIDDSAKQLFSKISFKSNKYLDQFREKNMHIPLISPKGFSYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVEIAKAFMEDGELTDSEPSHAEHSLFTCQKNEETVCLNSRSGKRRGDDLVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKDRRLFMHHISLEPVTCGPFGTTKERQEIQSPNFTAPGQEFLSKSHFHERLALEKSSSILSISRQPFYKVPATRNEEMKRPVTTGKPTKIFVPPFKTKSHFHRDEQCVSKNINLEENKQKQNIDKHGSGDSENNINDSEIHQLNKNNSNQAATVNVTKREEEPLDLITGLKNARDIQDMRIKKKQKQHIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLTSRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLEAPESLMLKISANSTRPTCWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCADVIIQRAYPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTKQYIPSRALTRQQVHALQDGAELYEAVKNASDPGYLEGYFSEEQLRALSNHRQMLNDKKQAQIQSEFRKAMESAEQDKQGLSRDVTTVWKLRVVSYAKKEKDSVILSVWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSKKANIQLAATKKTQYQQLPASDEILFQVYQPREPLHFNRLLDPDFQPPCSEVDLIGFIVSVVKKTGLAPLVYLSDECHNLLAIRFWIDVNEDIIKPHVLIAASNLQWRPESKSGIPTLFAGDFSVFSASPKESHFQETFNKMKNTVKNIDIFCNDAENKLMHMLSNNPKWSTPTKDYTSEPYTAQ</mol_seq> | |
916 </sequence> | |
917 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">microcebus_murinus</property> | |
918 </clade> | |
919 </clade> | |
920 <clade branch_length="0.004582"> | |
921 <confidence type="bootstrap">63</confidence> | |
922 <taxonomy> | |
923 <id>376913</id> | |
924 <scientific_name>Haplorrhini</scientific_name> | |
925 </taxonomy> | |
926 <clade branch_length="0.06932"> | |
927 <name>ENSTSYG00000000478</name> | |
928 <taxonomy> | |
929 <id>9478</id> | |
930 <scientific_name>Tarsius syrichta</scientific_name> | |
931 </taxonomy> | |
932 <sequence> | |
933 <accession source="Ensembl">ENSTSYP00000000441</accession> | |
934 <name>BRCA2-201</name> | |
935 <location>GeneScaffold_7779:11488-76077</location> | |
936 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPLYNSEPTEEPEYKISSYEPNLFKTPQRKPSFHQLASTPIIFKEQGLTLPLYQSPVKELSKYSLELGRNIANSKHKSHHTVKIKRDEADDVTSPLLNSCLRESSDVLQCTHVSSQKDKSVVCGSLFHTPKFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPTLSSTVLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKMLGNSFGKVNSCKDHFGESMPSVLEDEVHETVVDTSEEDSFLLCFPKCRTGNLQKNRTEKTRKTNLYEAKTEECEEVKKQMEEQHLLGSEMELNVSDPLDSVIADQKPFGNGSGRISKEFVPSSACEWSQLTLSGLNGTQVEKIPLLCSSCDQNNSEKDLIHTEKECIDFITSENSLPHISSLPQSEKKLSKETVVNKRDEEQHIETHEDSILAVKRAGSGTSPTAFPYQGIKKSIFRIRESPEETFSTIFSGNMSNRCFKEGTEASESELEIHSVCSQKEDSLCTCPVDNGIWPTTIIHSCVTSKNTGLISTLKKKTNKFIYAISGEASYQKKIQKDQKSDTDRSSQLAASTFNASLXXXXXXXXLLHSSVKRNSLQNDSEEPTLSLTNSFGTISRKCPNKETSSNNTVISQDLDYKEAKINKEKLHSFIIPEPDYLLCFQEGKCENNPKSRKIFDTKEKNLAATGHPAVQHAKVDCSGIFRSQESLLYDHDSASTLILTPTSKNSSSNLVVISKGKESFKMSDKLQCKNCETDFELTKNIPMEKNQEIPALSEHSKNVELLPPRKHLTVQVNQNTNLTITQKEQQTTLISKITVNSNSEELFSDNENNFVFQVTNERGNPVLENTKELHEVDLSCVKEPILENSTMVAFAGINDKQTAQVSIKKDLDSSDIDYGFIEDRNSVKQHLKLTRGQDLESEISLDINKISNKNNDYMDKWAELLDPISNHSFGGSFRTASNKEIKLSECNIKSKILFDIEEQYPTSLACVEIVIVELDSQKKLSKTHAFVSQSVNTVSVHAQSSTIVSDCKNGHPTPQMLFLKGDFNSNHNLTPSQKAEITELSSILEESGSQFEFTQFRKPSHIILNNTFEALENQMTDLNTTSEKWKDVDLHRTINAPSISQVHSSRKFEGAVGVKQKFACLLENNCNKSASGYSTDENEVEFRGFYSARGKKLNVSNEALQKAVELFSDIENINEKTFTEVDPRSSSSGKYHDSIVSMFKIENHNNDRNFDEKNNKCQLTSPNNTEVTTGTSIKENIENYKRNTENENNKHTASDRRNTCNSGESNVSDSSRNETVYIHKDENDLPCTDQHNISLKLSSHFMKKGNIQIKEHLSDLTCLEVVKAEETCQVNTSNKEQLTTCKMEQNIKDFETFDISFHTASGKKIRVFKESLNRVVSFFDEKPEEELNNFSLNSKLLSGIKKNKVDILSHEETDLAKNKILKESIPVGTGNQFGTLQQQPDCDLGKVKEATLWSFHTASGRKVKITKESLYKVKNLFDEKQDISEIISFSHQEAKTLNDRQDCKEELKLACETSEVTTVPKCEEIQNSLDDGRNLVSNETAVLPRLLSDNLRRQSENLKASNSKSLKVKVHENVEKETARSPTPCYTDQSPYSAIENSALGFHTGHGRKISVSQASLLKAKKWLREGELDDQPEKINTAGYIENPPCENNLSSSMTENDKNHLSEKQNSTYLSNSSLSNSNSYLSDFCYSEEIYNDSGYLSKNKMDSGFELVVKNVEAKRNSSCPEVMSTMREANMNPKTVNEDTCVQNLVTNSLPCKNKNATIKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPIKRNLLNEFDRIIENQEKSLQASKSTPDGTIKDRRLFMHHISLEAVTCGPSCTTNKRQEKQNPNFTAPGQEFLSKSHFYEHRTLEKSSSNVSVSGQPFFKVPGTRNEKMAPSITAGKLTKVFVPPFKTKSHFHRDEEGTNLEENKQKQDIDKYGSGDSDNNINDSEIHPSNTNNSNQAANVIFTKCEEEPLDLTTSLQTARDIQDMRIKKKQRQRVFPLPGSLYLAKTSTLPRISLKAAVGGQVPSACSHNQLYMYGISKHCVKINSKNAESFRFHTQDYFGKESLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAKKIMERDDTAKTLLCVSDVISSINVSETSDSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTPLEAPESLMLKISANSTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTKRHIPSRALTRQQVRALQDGAELYEAVKNAPDPGYLEGYFSEEQLRALNNHMQMLNDKKQAQIQSEFRKAVESAEQGERSLSRDVTAVWKLRIASYANREKDSVILSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKSERAGIQLAATKKTQYQQLPASDELLFHVYQPREPLHFSRLLDPDFQPPCSEVDLIGFVVSIVKKTGLAPLVYLSDECQNLLAVKFWTDLNEDIIKPHMLIAASNLQWRPESKSRIPTLFAGDFSVLSASPKESHFQDTFNKMKNTIENIDIFCSEAENKLMHMLNVNDPRWSTPIKGCTSELHTAQTVLVTGNKLLMSSPNNEINHQNLLSLSTPKGKFVSIPVSVQMTSKSCCKGEKEVDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCDSKYEIPLKKALSSPQMTPLKKFNKLSLLESNSIADEELALINTQALLSGSTGGNQLVSISEASRTAPTNAKDDLGLKRHCVASLIKEQNDSQAGTEERESNGQDTRTEKHI</mol_seq> | |
937 </sequence> | |
938 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tarsius_syrichta</property> | |
939 </clade> | |
940 <clade branch_length="0.032464"> | |
941 <confidence type="bootstrap">100</confidence> | |
942 <taxonomy> | |
943 <id>314293</id> | |
944 <scientific_name>Simiiformes</scientific_name> | |
945 </taxonomy> | |
946 <clade branch_length="0.008398"> | |
947 <confidence type="bootstrap">74</confidence> | |
948 <taxonomy> | 1150 <taxonomy> |
949 <id>9526</id> | 1151 <scientific_name>Cetartiodactyla</scientific_name> |
950 <scientific_name>Catarrhini</scientific_name> | 1152 <id>91561</id> |
1153 <common_name>Cetaceans and Even-toed ungulates</common_name> | |
951 </taxonomy> | 1154 </taxonomy> |
952 <clade branch_length="0.011844"> | 1155 <events> |
953 <confidence type="bootstrap">99</confidence> | 1156 <type>speciation_or_duplication</type> |
1157 <duplications>1</duplications> | |
1158 </events> | |
1159 <clade branch_length="0.068218"> | |
1160 <name>ENSSSCG00000029039</name> | |
954 <taxonomy> | 1161 <taxonomy> |
955 <id>9528</id> | 1162 <id>9823</id> |
956 <scientific_name>Cercopithecinae</scientific_name> | 1163 <scientific_name>Sus scrofa</scientific_name> |
1164 <common_name>Pig</common_name> | |
957 </taxonomy> | 1165 </taxonomy> |
958 <clade branch_length="0.004946"> | 1166 <sequence> |
959 <name>ENSCSAG00000017920</name> | 1167 <accession source="Ensembl">ENSSSCP00000028073</accession> |
1168 <location>GL894447.1:46-18025</location> | |
1169 <mol_seq is_aligned="0">LKSYFSNHDESLKKNNRFIPSGRDNENKNQREAKSHGLEKMLEDSFDKVDNCKDHLGKDELHETVADISEEDSFSLCVSKYKTRSLQKMKTGRTRKNIFNETNTYEYEEAKKQMTENKHSFVSETEPNDGDSLDSNVTSQTPFGNGTDNISKEFVPSSASEWSQLTLSGLNETQMEKTSLLHISSCDQNNAEEDCIGTDKECTNIITVENSLPHIASMSKTRTILNEVTVVNKRDEGQCVESPDDSTGVENQVISDSSLIASPLQGIKKSLFRMRESPEKTANADFPSNMTDPNLKEEPEASRSGLEIHTLCSQKEGSLCMHSADNGSWPATTKYTSVALKNTGLISTLKKKTKKFIYAINDRTSYQGLKAQKDQESELMNSSAQFEAKPFEAPHTFTNTDSVGLLHSSVQKNRLQDDSEERILSSASSLGTILRKCSNNESHSDNKTVSQDLDYKEAKIDKEKLPSFITTETDNVSCMQKKHCEDDPKSQRVLDIKEKVLPAGRHPAVPHSEEGRDTYFQSQENFLHDLDNTTILTPSSKDLLSNPVVTSGGKESYKMSEKIKSRNCKADFELTRNISMEKNQETCVLNDSSQKAELLAPEKYLTVVSPSMKVQLNQNINLTGIQKDQEETTLISKITVSPNSEELFPDNETNFVFQTPTKRNIPVLGNIMEVHEVDLSCLREPVLKNSALVTCTDIDDEQTAKGSMTKDFVSSTNRAHDLIEKNRTSVQQQPKIIQGQESKSHTSLDIDVXNRSNDCMDSWAGLSDLIASHSFGNGFRTASNKEIKLSEHNIKKSKLLFRDLEEHYPPSLACVETVNTLSLASQKKESKPHALDLPSVNTVSGCVQSSAILSDSENRHTTPPILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFKKPGHITQNSLCEMPANQMTVLNTPSEEWKDPALHLTSNAPSVSQAESSSKSEGIDGGKQKFACLSSSNCSRSASGYLADKNEVEFRGFYSARGTKLNVSRKALQKAMNLFSDIENVSEETSAAVGPGCFSSSKCNDSDVSIFKVENYSSDKSLSEKYNKCQLILKNNIERTADIFVEENTDGYKRNTENKDNKCTGLASNLGEADDSASSKTDTVYMHEDETGLPFIDHNIHLKLPNHFXTQIKEGLSDLTCLEVMRAEETFHINTSNKQSTVNKRSQKIKDFDVFDLSFQSASGKNIRVSKESLNKAVNFFDEKCTEEELNNFSDSSNSEILSGININKINISSHKETDSDKNKLLKESDPVGIENQLLTLQQRSECEIKKIEEPTMLGFHTASGKKVKIAKESLDKVKNLFDETKQDSSETTNSSHQGVKTQKDREVCKEELELTFETVEITASKHEEIRNFLEEKKLVSKEITMPPRLLRHHLHRQTENLSMSNSIPLKGKVHENMEEETSCHTDQSTCSAIENSALTFYTGHGRKISVNQASVFEAKKWLREGELDDQPENVDSAKEYARDYVGNPLCGSSSNSIITENDKNLPEKQNSTYLSNSVSNNYSYHSDFCHSNEVLSKSESLSENKIGNSDTEPAVKNVKDRKDTCFSEEISTVREANTHPQAVDEDSWVRKLVINSTPCKNKNTPGEVSRSNSNNFEKEPPAFSTSGNIAFVSHETDVRERFADNNRKAIKQNTESMSGSCQMKIMTGAHKALGDSEDVIFPNSPDSEEHITRSQEVFPEIQSEQILQHDPSVSGLEKVSEMPPCHINLKTFDIHKFDMKRHPMSVSSMNDCGVFSTASGKSVQVSDTALQKARQVFSKTEDVAKPFFSRAVKSDEEHSDKYTREENAMMHPPPNFLSTAFSGFSTASGKQVPVSESALCKVKGMFEEFDLMGTECRLQHSPTSRQDVSKILPLSEIDERTPEHSVSSQTEKAYNEQFKLPDSCNTESSSSENNHSVKVSPDLSRFKQDKQLVSGAKVSLVENIHHLGKEQALPKNITMEIGKTETFPNLPLKTNTEICSTKSKDPENSFETEAVEIARAFMEDGELTDSELPSHAKHSLSRQKNEETVLLTLGIGKRRGDALATVGEPPIKRNLLNEFDRIIENQEKFLKASKSTPDGTMKDRRLFMHHISLEPVTCGPACTTTERPKVRNPHFTAPGQGFLAESRLDEHLTLEKASSNLSVSGQPLCKAPAPRNEKRRHSLSTGKPMKVFVPPFKTKSHVHRDEQCVTGNTELEENKQKQKNVDEHGFGNSENNVNSGEIPQTTTVIFTKNEEEPLGIV</mol_seq> | |
1170 </sequence> | |
1171 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sus_scrofa</property> | |
1172 </clade> | |
1173 <clade branch_length="0.006393"> | |
1174 <confidence type="bootstrap">8</confidence> | |
1175 <taxonomy> | |
1176 <scientific_name>Cetartiodactyla</scientific_name> | |
1177 <id>91561</id> | |
1178 <common_name>Cetaceans and Even-toed ungulates</common_name> | |
1179 </taxonomy> | |
1180 <clade branch_length="0.000482"> | |
1181 <confidence type="bootstrap">10</confidence> | |
960 <taxonomy> | 1182 <taxonomy> |
961 <id>60711</id> | 1183 <scientific_name>Cetartiodactyla</scientific_name> |
962 <scientific_name>Chlorocebus sabaeus</scientific_name> | 1184 <id>91561</id> |
1185 <common_name>Cetaceans and Even-toed ungulates</common_name> | |
1186 </taxonomy> | |
1187 <clade branch_length="0.04361"> | |
1188 <confidence type="bootstrap">100</confidence> | |
1189 <taxonomy> | |
1190 <scientific_name>Bovidae</scientific_name> | |
1191 <id>9895</id> | |
1192 <common_name>Bovids</common_name> | |
1193 </taxonomy> | |
1194 <clade branch_length="0.017248"> | |
1195 <name>ENSOARG00000011179</name> | |
1196 <taxonomy> | |
1197 <id>9940</id> | |
1198 <scientific_name>Ovis aries</scientific_name> | |
1199 <common_name>Sheep</common_name> | |
1200 </taxonomy> | |
1201 <sequence> | |
1202 <accession source="Ensembl">ENSOARP00000011988</accession> | |
1203 <name>BRCA2-201</name> | |
1204 <location>10:28872321-28924433</location> | |
1205 <mol_seq is_aligned="0">MPIGCKERPTFFDIFKTRCNKADLGPISLNWFEELSSEAPPCNSELSEELEYKISSYETNPFKTPQRKPYHQLASTPVIFKEQSLTLPLYQSPLKELHKFRSDSGKDIANSKHKSCCRVKAKINQANDVISPPPNSSLSESPVVLRCTYVTPQREKSVVCGSLFHTPKLIKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVQDEEASAAVFPSDTTTILKTYFSNHDESLKNSKFIPSGPDSDNKNQTEAESHGLEKILEDSFGKVSSCKDHFEKSLPNVLEDEVHETVAGISEEDSLPVCVSKYKTKKLQKTKTGKTRKNIFHETKTDDCEGAKKEMTESKHSFVCETEPNDSDPLDSNVINQKPAGNGTDIISREVVPSSVSEWSQLTLSSLNGTQVEKTSLLHISCDQTNSEEDFIGTEKDCTNFITLENSLPHISSISKIVKILNKETVVNKTDEGRCLESHEDPTTMGQQTLTDSSPLQGIKKSTFRIRESPEKILREDFSNNVTDTNLKEEPEDSKSESEIQTIYSQKEDFVCSSSGDNESWPATTKHTSEALKSTGLISTLKKKTKKFIYVINDKTTYQELKIQKDQESELTNSSAQFEAKPLEAPHTFTNVDSGSLHSSVQKNCSQNDSEEPSLSLTSSFGTVLRKCFNNESSSSNNQKISQDLYCKETNINKEKWQSFITTETDYVSCLQDKHCEDNPKSQGVSDIKEKVLPVVCRPELPHSEECSDTVFQFQESFLHDHENTTILTPSSKDLLSNPVVISRGKQSYKMSEKIKSKNCEAGFELTKYISMEKNQETCVLNENSKKPEMLSPEKYITGASPSVKVQCYQNMNLTVIHKDQEETTLISKRTVNPNSEELFPDNENNYIFQTTSERNIPILGNIKEIHEADLSCLKEPVLKNSVIVTSTDMDGGQAAKVSITKDSVSSNIVHDLIEKNRNSIKQQPKMTLGQDSKPDVSLDTDTRSNRNNFCGDKWAGLSDLTSGHSFGNGFRTASNKEIKLSEHNIKKSKTLFKDIEEHYPASLAWVESVKSLENQKKEGQPHDHDSQSIDTVCGYVQNGAVVSDGENSHTTPPVLSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHRLQSNPFEMPETQMPVSNTTSEEQKDVDLHLTASVPSLSHVDNSKKCGLVGHEQKLICLSTTKCNKSVSGSLTDKSEEEFKGFYSARGTKLNFSNEALQKAMKLFSDIEKVSEETPAEVDPGSFSSDQCNDSDVSMFKVENYSNDKNLSEENNKCQLILQSNFEMTTSIFVKENTEDFKRNTENKDNKCTDFVCNLGESDGCASSKNDTVYVHKDESGLPYTDQYNIHLKLSHHFMKEENIPIKEGLSDLTCLEVMKAEETFNKSDKKEPIANKMRQNIKDFGVFDLSFWTASRKNIRVSKESLNKVVNFFDEKCTEKEFNHFSDSSNSELLSGIHINKKDISSHEETSMFKNKMLKESSPAGIENQILTLQQREKCELKKIREPTMLGFHTASGKKVKIAKESLDKVKNLFDETKQDNSEVTGFIHQEAKMLKNKEVCKEGLDLACEIVKVTAPQHEEMQNSLEEKKLVSEETAMPPRFLSDHLHRQTENLHTSHSISLKVKVHENMEEETAKSPLSCYTNHSTFSAIDNSALAFYTGHGRKISVSQASLLEAQKWLREGELNDQPEKTNSSEIICLKEYTGDYVQNPSCGNSSNSIITENDKSLSQKQDSTSLNNNMPNSYSYHSDFCHSSEGFNKSEYLSKNKIDNSGIEPVVKNVKDRKNTSFSEVIPTIRETNINPQALDKDSCVLKLMTKFSPCKNKKTAVEVALSNSNNFETEPPAYSTASDQIAFVSGETTVRERFTDNCRNIYIKQNTETKSGTDQTKTVTESHKALGDSEDVIFPNSPDNEEHNMHSQDVSHDIQGEPILQHDQSTSGLEKVSEIPLRHVDLKTSDRCKFNMGNHPRSVSSMNACGIFNTASGKSVQVSDSALRKARQVFSKSEDSAKQLFSTVSFESNEHSDIFRRKDNIMAHNPPNLLSSAFSGFSTASGKHVPVSESALRKVKGMFEEFNLIETEYSLQHSPTSTQDISKILPVSCTDKRTPEHSLSSKMEKAYNKEFKLSNNYNTESGSSENNHSIKVSSYLSEFKQDQQQSVLGTRVSHIDNIHLTGKKQTLPKNIKKEIGKTETFPDLVKTNTEICSTDSKDPENYFETEAVEIAKAFMEDGELTDSEFPSHAKHSPLTCHKNEETVLSNSRIEKRKGDALITVGEPPIKRNLLNEFDRIIENQGKSLKASKSTPDGTMKDRRLFMHHFSLEPVTCGPSCVTTERQEIQNPNFTAPGQEFLSKSQFYEYLTLGKSSSNLSISGQPLCKVPDPRNEKRRHSITVGKPMKVFVPPFKTKSHIHRDEQFVGKNTNLENKQKQKNVDEHGSGDSENNVNNCETHQTTTIHFTKGEEEPLGSITNLQNARDIQDMRIRKKQRQRIFPQPGSLYLAKTSTMPRISLREAVEGRIPSVCSHKRLYMYGVSKHCVKINSKNAEAFQFHTQDYFGKEGLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPRLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDISEPSSNKTSSVDATKVAIIQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSTGLYIFRNEREEEKEATKYAEVQQKKLEALFTKIQAEFEDHEENVTEQCIPSRALTRQQVRALQDGAELYEAVKNAPDPSYFEGYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPRDVTPVWKLRIMSYKRKEKDSVILNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFSKLLDSDFQPPCSEVDLIGFVVSVVKKIGIAPLVYLSDECHNLLAIKFWIDLNEDIIKPHILIAASNLQWRPECKLGIPTLFAGDFSMFSASPKEGHFQEAFHKMKNTVENIDMFCEDAKNKLIRLLNASNPKWSTPTKDCTSAPPTAQTVLGSGNKFPLSSPSSEMNYQSPLSLCKLKEKSVCTPVSAQVTSKSCCKGEKETDDRKSCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPMKKKELTYPQMTPLENLNNISLLESDSIADEELALINTQALLSGSAGGNQLTSTSKSNRTVPTSPKDYVGLKRPYTTSVIKERENSPARTEEQETNMQDTSAIKNISKRLQRRLKPK</mol_seq> | |
1206 </sequence> | |
1207 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ovis_aries</property> | |
1208 </clade> | |
1209 <clade branch_length="0.011436"> | |
1210 <name>ENSBTAG00000000988</name> | |
1211 <taxonomy> | |
1212 <id>9913</id> | |
1213 <scientific_name>Bos taurus</scientific_name> | |
1214 <common_name>Cow</common_name> | |
1215 </taxonomy> | |
1216 <sequence> | |
1217 <accession source="Ensembl">ENSBTAP00000001311</accession> | |
1218 <name>BRCA2-201</name> | |
1219 <location>12:28637213-28688200</location> | |
1220 <mol_seq is_aligned="0">MPIGCKERPTFFDIFKARCNKADLGPISLNWFEELSSEAPLCNSEPLEESEYKISSNETNPFKTPQRKPYHQLASTPVIFKEQSLTLPLYQSPLKELRKDIANSKHKSCCRVKAKINQANDVISPPPNSSLSESPVVLRCTHVTPQREKSVVCGSLFHTPKLIKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVQDEEASAAVFPRDTTAILKTYFSNHDESLKNNKFIPSGPDSDNKNQTKAESHGLEKMLEDSFGKVNSCKDRFEKSMPNVLEHEVHETVAGISEEDSLPVCVSKYKTKKLQKRKTGKSRKNIFHETKTDECEEAKKEMTESKHSFVSETEPNDSDPLDSNVIKQKPVGNGTDIISREVLPSSVSEWSQLTLSGLNGTQVQKTSLLHISSCDQTNSEEDLIGTEKECTNFITLENSLPHISSISKTVKILTDSSPLQDTKKSIFRIRESPEKIFREDFSNNVTDSNLKEEPEDSKSESEIQTIYSQKEDSVCSSSGDNESWPATTKYTSEALKNTGLISTLKKKTKKFIYVINDKTAYQGLKIQKDQESELTNSSAQFEAKPLEAPHTFTNVDSGSLPSSIQKKCSQNDSEEPTLSLTSSFGTVLRKCFNNESSSSTNKTISQDLYCKETNINKEKWQSFITTETDYVSCLQDKHCEDNPKSQGVSDIKEKVLPVVCRPELPHSEECSDTVFQFQESFLHDHDNTTILTPSSKDLLSNPVVIPRGKQSYKMSEKIKSKNCEAGFELTKYISMEDNQETCVLNENSKKAEMLSPEKYITGALPSVKVQCHQNMNLTVIHKDQEETTLISKRTVNPNSEELSPDSENNYIFQTTSERNIPILGNIKEVHEADLSCLREPVLKNSVRVTSTDMDGGQAAKVSITKDSVSSNTVHGLIEKNRNSVKQQSKMTLGQDSKPDVSLDTDTKSNRNNFCKDKWAGLSDLTSSHSFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPASLPWVEIVKSLENQRKGGQPRDRDSQSVDTVCGYVQSGAVVSDGENSHTTPPVLSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHILQSNPFEMPETQMTVLNTTSEEQKDVDLHLTASAPSLSHIDSSKKCEGLAGREQKMICLSTTNCNKSVSGSLTDKGEEEFRGFYSARGTKLNVSTEALQKAMKLFSDIEKVSEKTPAEVDPGSFSSNQCNNSDVSMFKVENYSNDKNLSEENNKCQLILQSNFEMTTSIFVKENTEDFKRNTENKDNKCVGFVCNLGESDGCASSKNDTVYVHKDESGLPYTDQYNIHLKLSHHFMKEENIPIKESLSDLTCLEVMKAEETFNKSNKKEPIANKMRQNIKDFGVFDLSFWTANGKNIRVSKESLNKVVNFFDEKCTEKELNNFSDSSNSELLSGININKIDISSHEETSMFKNKMLQESSPAGIENQILTLQQREKCEFKKIKEPTTLGFHTASGKKAKIAKESLDKVKNLFDETKQDNSEVTDFIHQGAKMLMDREVCKEGLDLACEIVKGTAPKHEEMQNSLEEKKLVSEETAMPPRFLSDHLQGQTENLHTSHSVSLKVKVHENMEEETAKSPITCYTNHSTCSAIENSALAFYTGHGRKISVSQASLLEAKKWLREGELNDQPEKINSSKIICLKEYTRDYVGNPSCGNSSNSITENDKSLSEKQDSTSLNNSMPNSYSYHSDFCHSSEGFNKSENLSKNKIDNSGIEPVVKNVKGRKNTSFSKVIPTIREANINPQAVDKDSCVLKLVTKFSPCKNKKTAAEVALSNSNNFETEPPAYSTASDQIAFVSRETTVRERFTDNCRNIYTKQNTEPKSGTDQTKTVTDSHKALGNSEDVIFPNSPDNEEHNMHSHDVSPDIQSEPILHDQSISGLEKVSEIPLRHVDLKTSDRCKFNMGKHPRSVSSMNACGIFNTASGKSVQVSDSALQKARQVFSKSEDSAKQFFSRVSFKSNEEHSDIFTRKENTMTHNPPNLLSSAFSGFSTASGKHVPVSESALCKVKGMFEEFDLIGTEYSLQHSPTSRQDVSKILPVSCTDKRTPEHSVSSKMEKAYNKEFKLSNNYNIESGSSENNHSIKVSSYLSEFKQDQQQSVLGTRVSHTDNIHLLGEKQTLPKYIKKEIGKTETFPDLVKTNTEICSTDSKDPENYFETEAVEIAKAFMEDGELTDSEFPSHAKHSPFTCQKNEETVLSNSRIEKRRGDALVTVGEPPIKRNLLNEFDRTIENQGKSLKASKSTPDGAMKDRRLFMHHISLEPVTCGPSCITTERQEIQTPNFTAPGQEFLSKSHFYEHLTLGKSSSNLSISGQPLCKVPDPRNEKRRHSITIGKPMKVFVPPFKTKSHIHRDEQFVGKNTNLEENKQQKNIDEHGSGDSENNVNNYSITNLQNARDIQDMRIRKKQRQCIFPQPGSLYLAKTSTMPRIPLREAVEGRIPSACSHKQLYMYGVSKHCVKINSKNAEAFQFHTQDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKKFANRCLNPERVLLQLKYRYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDISEPSSNKTSSVDTTKVAVVQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSTGLYIFRNEREEEKEATKYAEAQQKKLEALFTKIQAEFEDHEENVTEQCIPSRALTRQQVRALQDGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPRDVTPVWKLRIMSYKRKEKDSVILNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFNKLLDSDFQPPCSEVDLIGFVVSVVKKIGIVPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPGCKLGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTVENIDTFCEDAKNKLIRLLNASNPKWSTPTKDCTSAPPTAQTVLGSGNKFPLSSPSSEMNYQSPLSLCKLNEKSVCTPVSAQVTSKSCCKGEKETDDPKSCKKRRALDFLSRLPVPPPVSPICTFVSQAAQKAFQPPRSCGTKYETPMKKNELNSPQMTPRKKFNDISLLESDSIADEELALINTQALLSGSAGGNQLTSISKSTRTVPTSPKDYVGLKRPYTTSVIKERENSPARTEEQETNIPDTS</mol_seq> | |
1221 </sequence> | |
1222 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">bos_taurus</property> | |
1223 </clade> | |
1224 </clade> | |
1225 <clade branch_length="0.12289"> | |
1226 <name>ENSSSCG00000020961</name> | |
1227 <taxonomy> | |
1228 <id>9823</id> | |
1229 <scientific_name>Sus scrofa</scientific_name> | |
1230 <common_name>Pig</common_name> | |
1231 </taxonomy> | |
1232 <sequence> | |
1233 <accession source="Ensembl">ENSSSCP00000022872</accession> | |
1234 <location>GL894428.1:2554-22348</location> | |
1235 <mol_seq is_aligned="0">IDLITNLQIARDIQDMRIKKKKRQRIFPQPGSLYXAKTSTLPRISLKEAVEGRVPSACSHKQLYMYGVSKHCIKINSKNAESFEFHTQDYFGTEGLCAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIALGTNITETRSNKTNSVDTTKVAMVELTDGWYAIKAQLDPPLSALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKVNSITAHSCFKKKKTKKTVTDSKNYIFLCVLFGGGGKSEIIIERYYILKVTIIQFLYLFPNLPTREHSSFRFSWSMFSSVLKFIVQLLSHAFFPLENAAERCLPSRALTRQQVRALQDGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQLLNDKKQAQIQLEFRKAMQSAEQGEQILPRDVTPVWKLRIISYNKKEKDSVILSIWRPSSDLCSLLTEGKRYRIYHLTAAKSKSKSERANIQLTATKSTQYQQLPASDEILFQLYRPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKTGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLVAASNLQWRPESKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIENIDIFCNEAENKRIHILNAYNAKWFTPTKDCTLEPQTPQTVLGTGNKFLMSSPSTEMNYQSPLSLYKPKGKSVSTPVSAQMTSKSCCKGEKEIEDPKNCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKHEIPIKKKQLNSPQMTPLKKFNDISLLEGDSIADEELALINTQALLSGSAEENQLTSISESTRTVSTSPKDYPRLKRHHTTS</mol_seq> | |
1236 </sequence> | |
1237 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">sus_scrofa</property> | |
1238 </clade> | |
1239 </clade> | |
1240 <clade branch_length="0.03099"> | |
1241 <name>ENSTTRG00000010541</name> | |
1242 <taxonomy> | |
1243 <id>9739</id> | |
1244 <scientific_name>Tursiops truncatus</scientific_name> | |
1245 <common_name>Dolphin</common_name> | |
963 </taxonomy> | 1246 </taxonomy> |
964 <sequence> | 1247 <sequence> |
965 <accession source="Ensembl">ENSCSAP00000013938</accession> | 1248 <accession source="Ensembl">ENSTTRP00000010004</accession> |
966 <name>BRCA2-201</name> | 1249 <name>BRCA2-201</name> |
967 <location>3:11071682-11155213</location> | 1250 <location>GeneScaffold_3256:41151-92800</location> |
968 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKDQGLTLPLYQSPVKELDTFRLDLGRNVPSSRHKSLRIVKAEMHQADDVTCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEESSETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVCETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLSTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESQRDYILAVKQAVSETSPIASSFQGIKKSIFRIRESPKETFSASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTKFIYAIHDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVKRSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEKLQLFITPEADSLSFLQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSPLYDHENASTLILTPTSKDVLSNLLMISRGKESYKMSDEIKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRGASPSRKVQFSQNTNLRVIQKDQEETTLIPKITVHPDSEELFSDNENNFLFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNIVYDLAEENKNSVKQHLKMTLGQDLQPDILNIDKIPDKIDDCMDKWAGPLDPISNHSFGGSFRTASNKEIKVSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSEENRDAGLVIMNAPSIGQVNSSKQFEGTVGIKQKFAGLLKSDCNKSASGYLTDENEVEFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSVFKIENHNDKTVSEKNKCQLMLQNNIEMTTGTFVEEITENYKINTENEDNKYTAASRNSRNLEFVSSDSSKNDTVCIHKDEKDLPFTDQRNICLKLSGQLMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFGISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEEIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSSSHQWAKTLKYREACQDLELACETVEMTTAPKCKEMQNSLNNDKNLVCIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPTTCYTNQSPYSVIENSALAFYTSCSRKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSYSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKNTSFSKVISSVKDANTYPQTVNEGICVEELVTSSSPCKNKNAAIKLSISNCNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFGKVIKENNENKSNICQTKIVAGCYEALDDSEDIFHNSLDSDECSMHSHKVFADIQSDEILQRNQNMSGLEQVSKMSPCDVSLETSDICKCSIGKLPKSVPSTNTCGIFSTASGKSVQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTTIHTPKHLISSQKDFSYNVVNSSAFSGFSTASGKQVSISESSLHKVKGMLEEFDIIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKACSKEFNLSNNFNVEGGSSENNHSIKVSPSLSQFKQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDGELTDSELPSHATHSLFTCPQNEEMVLSNSRIGKRRGEALISAGEPPIKRNLLNEFDRIIENQEKSLKPSKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNVAVSGHPFYQVSATRNEKMRHLITTGKPTKVFIPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAATVIFTMCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKISSKNAESFQFYTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLIALLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEEDTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGNFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAVTKKTQYQQLPVSDEILFQVYQPREPLHFSKFLEPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPIKDCTSESYTAQIIPGTGNKLLISSPNCELYYQSPLSLCMAKRKSVSTPVSAQITSKSCKGEKEIDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVNESTRTTPTSSKDYLRLKRRCTTSLIKEQESSHSGKEECENNKQDTIITKKY</mol_seq> | 1251 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELSSEAPPYNSEPLEESEYKISSYETNPFKTPQRKPYHQLASTPIIFKERGLTLPLYQSPLNELDKFRLDSGKDIASGKHKSCCTTKVKMNQVNDVTSPPPNSSLSESPVILRCTHVTPQREKSVICGSLFHTPKLMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTLSSTVLIVRDEEASATVFPNDSTASKSYSSHDESKKNITISGPDSENKNQTEAKTHGLEKMLEDSFGKVNSCKDHFEKSMPYVLEDEVCETVADISEEDSFPVCVSKYKTRNLQKIKTGKTRKNIFNETKTDEYEEAKIQMTENKHSFVPEMEPNDSDPLDSNVINQKPPGNGTDKISREIVPSSASEWSHLTLSGLNGTQMEKTSLLHISSSDQNNSEDIIGTEKERTNFITLENSLLHISSISETVKILNEETVVKKRDEGQCLESREDSTVVGKQALSDSSLIASPLQGIKKSVFRIRESPEKTFRADFSNNMTDANFKKEPEASKSGSEVQTVCSQKEDSLHTSSVDNGSWPATTKHTSVALKNAGLISSLKKKTKKFIYAICDETSYQGLKMQKDQESELTNSSVQFEAKPLEAPHTFTNVDSGLLHSSVKKNCLQNDSEEPALSVTSSFGTIMRKCSNNESSSNNNKTISQDLDYKEAKINKEKLQSFITTETGYVSCLQEKHCEDDPKSQRVSDIKEKVLPAVFQPALPHSEECNDILFQSQESFLHGHDNTTILTRSSKDLLSNPVVISRGKESYKMSEKIKSENCEAGFELTKSISMEKNQETCVVNENSKKAELLSPEKYITEASPSMKVQFNQNTNLTVIQKDQEETTLISKLTVPPNSEELFPDKENNFVFQTTTERNIPVLGNIKEVHEADLSCLREAVPENSAIVACTDIDDGQAAKVSITKDFGSSDVVCDLAEKNRNSVKQPPIMTLGQDSKSDVSLDIDMKSNRNNDCMGKWAGLSDSISSHNFGRGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTSLACVEIVNTVSLENQKKGSRPHELDSQSVNTVSGYVQSSAVVSDSGNSHTTPLVLSLKGDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHMLQSNPFEMPENQITVLNTTSEEWKDVDLHLTINAPSLSQVGSSKKCKGIVGGKQKLACFSTTNCNKSASGYLTDKNEVEFRGFYSARGAKLNVSSEMQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXCNDSDVSMFNVENYNDTNLSEKNNECQLTLQNNIEMTTGIFVKEYTEDYRRNTENEDNKYTGFVCNLESDGNASSKNDTVYIRKDENGLPCIDQQNIHLKLSSQFMKEGNIQIKGLSDLTCLEVVKAEETFNVNMSNKKESATNKMRQNIKDFDVFDLSFQTASGKNIRVSKESLNKVVNFFDEKSAEELTNFSDSSNSELLSGININKIDISSHEETDMVKNKILKGGDPVGIKNQVLTLQQRPECEIKKIIEPAMLGFHTASGKKVKIAKESLDKVKNLFDEKKQNNSEITNFSHQGAKTLKDRELCKEGLELACETVEITAPKHEEMQYSLEEKRLVSETGMPPRFLSDHLYRQSENLKISNSISLRKVHENIEEETRKSPITCYTDQSTCSAIENSALAFYTGRGRKISVSQASLFEAKKWIREGELNNQLEKINSADCVGNPSCGNSSNSIITENDKNLSEKQDSTSLSNSMSNSYSYHSDFSHSNELFNKSEYLSKNKSHNSDIESVVRNVKDRKNTSFSEIISTVREANINPQAVDKDSCVQKLVTDSSPCKNTNTAVEVAISDSNNFETEQPALSIASDKIAFVSHETKVRERFTDNCRKVTKQNTESESGTGRKKIVTHSHKALGDSEDIIFPNSPDSEEHSMHSHEVFPDIQSEHLLQHDQSISGLEKVSKTPLCHINLKTSDKCKFNMGKCPKSVSSVNVCGIFSTASGKSVQVSDAALQKARQVFSKTEDSGKQLFPQVSFKSNEEHSNKFAREENTVIHTPQNLLSSAFSGFSTASGKQVPVSESAFCKVTGMFEEFDLIGTECSLQHSPPSRQDLSKILTLSCIDKRTSEHSVSSKTGKAYNEEFKLSNNYNIESGSSENNHAIKASPYLSQFKQDKQQLMSGTNVSHIDNIRLLGKEQALPKNIKMEIGKTETFPDFPMKTNTEVCSPNSKDPEKYFETEAVEIAKAFMEDDELTDSELLSHAKHSHFTCQKNKETVLINSGIGKRRGDALVTVGEPPIKRNLLNEFDRIIENQGKYLKASKSTPDGTMKDRRLFMHHISLEPVTCGPSCTSTERREMQNPNFTASGQEFLSKSHFSEHPTLEKSSSSLSVSGQPLCKVPAPRNEKRRHSTTTGKPMKVFVPPFKTKSHVHRDEQCVNRNTNFEENKQKQKNIDEHGSGDRENNVNDSEIHQTTAMLFTKGEEEPLDLITNLQTARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTMPRISLKVAVESRVPTACSHKQLYRYGVSKHCVKINSKNAESFQFHTQDYFGKESLWAGKGIQLADGGWLIPSNDGMAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLILCVSEIISLSTNISETSSSKINSMDTTKVAVVELTDGWYAIKAQVDPPLLALLKNSRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISANSTRPACWYAKLGFFSNPRPFPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSSGLYIFRNEREEEKEATKYAEAQQKKLEALFTKIQAEFEEHEENITERCIPSRVLTRQQVRALQDGAELYEAVKDSPDPSYLEGYFSEEQLRALNNHRQTLNDKKQAQIHVELRKAMESAEQGEQILPRDVTPVWKLRITSCKRKEKDSGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWLPESKSGIPTLFAGDFSMFSASPKEGHFRETFHKMKNTIENIDIFCNDAENKLIRILNTNNPKWSTPTKDYTSAPHTAQTVLGTGNKFLMSSPSSEMDYQSPLSLCKLKGKSVSTPAAAQMTSKSCCKGEKETDDPKTCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPMKKKELNSPQMTPLKKFNDISLLEGDSIADEELALINTQALLSGSAGENQLKSISESTRTTPTGPKDYLRLKRPYTASVVKEQGNSPAGTEEQKANMQDTSTENYIQ</mol_seq> |
969 </sequence> | 1252 </sequence> |
970 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">chlorocebus_sabaeus</property> | 1253 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">tursiops_truncatus</property> |
971 </clade> | |
972 <clade branch_length="0.000661"> | |
973 <confidence type="bootstrap">99</confidence> | |
974 <taxonomy> | |
975 <id>9528</id> | |
976 <scientific_name>Cercopithecinae</scientific_name> | |
977 </taxonomy> | |
978 <clade branch_length="0.001779"> | |
979 <name>ENSMMUG00000007197</name> | |
980 <taxonomy> | |
981 <id>9544</id> | |
982 <scientific_name>Macaca mulatta</scientific_name> | |
983 </taxonomy> | |
984 <sequence> | |
985 <accession source="Ensembl">ENSMMUP00000009432</accession> | |
986 <name>BRCA2-201</name> | |
987 <location>17:11687584-11777925</location> | |
988 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKDQGLTLPLYQSPVKELDTFRLDLGRNVPSSKHKSLRTVKAEMHQADDVTCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLNTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHRDYILAVKQAVSETSPMASSFQGIKKSIFRIRESPKETFSASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTNKFIYAIRDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVKRSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEKLQLFITPEAHSLSFPQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSPLYDHENASTLILTPTSKDVLSNLVKISRGKESYKMSDELKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLIPKITVNPDSEELFSDNENNFVFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNTVYDLAEENKNSVKQHLKMTLDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSEENIEAGLVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVEFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSMFKIENHNDKTVSGKNKCQLILQNNIEMTTGTFVEEITENYKINTENEDNKYTAASRNSRNLEFVGSDSSKNDTVCIHKDEKDLPFTDQHNICLKLSGQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFDISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEKIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETVEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDHLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSCSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKNTSFSKVISSVKDANTYPQTVNEGICVEELVTSSSPCKNKNAAIKLSISNCNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFGKVIKENNENKSNICQTKIVAGCYEALDDSEDIFHNSLDSDECSMHSHKVFADIQSEEILQHNQNMSGLEQVSKMSPFDVSLETSDICKCSIGKLPKSVPSTNTCGIFSTASGKSVQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTTIHTPKHLISSQKDFSHNVVNSSAFSGFSTASGKQVSISESSLHKVKGMLEEFDIIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKACSKEFNLSNNFNVEGGSSENNHSIKVSPSLSQFKQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDGELTDSELPSHATHSLFTCPQNEEMVLSNSRIGKRRGEALISAGEPPIKRNLLNEFDRIIENQEKSLKPSKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGKPTKVFIPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAATVIFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKINSKNAESFQFYTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAIKAQLDPPLLAILKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAVTKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNIVENIDILCNEAENKLMHILHANDPKWSTPIKDWTSESYTAQIIPSTGNKLLISSPNCELYYQSPLSLCMAKRKSVSTPISAQITSKSCKGEKEIDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKNETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTTPTSSKDYLRLKRRCTTSLIKEQESSHSDKEECENNKQDTITTKKYE</mol_seq> | |
989 </sequence> | |
990 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">macaca_mulatta</property> | |
991 </clade> | |
992 <clade branch_length="0.00613"> | |
993 <name>ENSPANG00000013323</name> | |
994 <taxonomy> | |
995 <id>9555</id> | |
996 <scientific_name>Papio anubis</scientific_name> | |
997 </taxonomy> | |
998 <sequence> | |
999 <accession source="Ensembl">ENSPANP00000002726</accession> | |
1000 <name>BRCA2-201</name> | |
1001 <location>17:11280025-11304342</location> | |
1002 <mol_seq is_aligned="0">MSIGSKERPTFFEIFKTRCNKADLGPVSLNWFEELSSEAAPYNSEPAEDSEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKERGLTLPPYQSPVKELDTFRLDLGRNVPSSRHKSLRTVKAEMHQADDVTGPLLNSCLSESPVVLQCTHVTPQRNKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETLFPHDTTANVKSYFSNHDKSLKKNDRCIPSVTDSENTNQREATSHRFGRTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTGNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEMESSDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNNSEKDLLNTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHKDYILAVKQAVSETSPMASSFQGIKKSIFRIRESPKETFNASFSGHVTDPNFKKETEASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYQGKKIPKDQKSELMNCSAQFEANAFEAPLTFANADSGLFHSSVERSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEELQLFITPEADSLLFLQEGQYENDPKSRKVSDIKEEVLAAAHHPVQHSKAEYSDTDFQSQKSSLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDELKGNNYESDFELTKNIPMEKNQDVCALSENSKHVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLIPKITVNPNSEELFSDNENNFVFQVANERNNFALGNTKELHETDLTCVNEPIFKNSTMVLYADIGDKQATQVSIKKDLDSSNIVYDLAEENKNSVKQHLKITLGQDLQPDILNIDKIPDKNNDCMDKWAGPLDPISNHSFGGSFRTASNKEIKVSEHNIKKSKMFFKDIEEQYPASLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMSFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQVTILNTTSVENRDAGLVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVAFRGFYSAHGVKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKFHDSVVSMFKIENHNDKTVSGKNKCHLMLQNNIEMTTGTFVEEITENYKINTENEDNRYTAASRNSRNLEFVGSDSSKNDTVCIHKDEKDLPFTDQHNICLKLSGQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETFDISFQTASGKNISVTKESFNKIVNFFDPKPEELHNFSLNSKLHSDIRKNKMDILSHEETDTVKNKILKESVPVGTGNQLVTFQERPQGDEKIKEPTLLGFHTASGKKVKITKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETVEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDHLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSTKRSVSQTSLLEAKQWLREGIFDDQPERINTADYVGNSLYENNSKNTIAESDKNHPSEKQDTTLNNSSMSNSYSYLSDEVYSDSGYLSKNKLDSGIEPVLKKVEDQKTLVFPK</mol_seq> | |
1003 </sequence> | |
1004 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">papio_anubis</property> | |
1005 </clade> | |
1006 </clade> | |
1007 </clade> | |
1008 <clade branch_length="0.003225"> | |
1009 <confidence type="bootstrap">74</confidence> | |
1010 <taxonomy> | |
1011 <id>314295</id> | |
1012 <scientific_name>Hominoidea</scientific_name> | |
1013 </taxonomy> | |
1014 <clade branch_length="0.011887"> | |
1015 <name>ENSNLEG00000001048</name> | |
1016 <taxonomy> | |
1017 <id>61853</id> | |
1018 <scientific_name>Nomascus leucogenys</scientific_name> | |
1019 </taxonomy> | |
1020 <sequence> | |
1021 <accession source="Ensembl">ENSNLEP00000001277</accession> | |
1022 <name>BRCA2-201</name> | |
1023 <location>GL397329.1:5273331-5357426</location> | |
1024 <mol_seq is_aligned="0">MPIGSKERQTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYRSPVNELDKFRLDLGRNVPNSRHKSLHTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVRGSLFHTPKFVKGRQTPKHISESLGAEVDSDMSWSSSLATPPSLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIPSVTDSENTNQREATSHGFGKTLGNSFKVNSCKDHIGKSMPNVLEDELYETVVDTSEEDSFSLCFPKYRTRNLQKVRTSKTRKKIFREANADECEKSKNQVKEEYSFVSEVQSNDTDPLDSNVANQKTFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNISEKDLLDTENERKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEKHLESHRDCILAVKQAISATSPVASSFQGIKKSIFRIRESPKETFNASFSDHMTDPNFKKETEASESGLEIHTVGSRKEDSLCPNSIDNGSWPATTTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYQGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTVLRKCSRNETCCSNNTIISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEILATACHPVQHSKVEYSDTDFQSRKSLLYDHENASILILTPTSKDVLSNLVMISRGKESYKMSDKVKGNNYETEVELTKNIPMEKNQDVCALNENSKNVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQEETTLISKITVNPDSEEHFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTVVLYADIGDKQATQVSTKKDLVYDFAEENENSVKQHLKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHNFGGSFRTASNKEIKLSERNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVSDCKNSHINPRMLFSKQDFNSNHNLTPSQKAEITELSTMLEESGSQFEFTQFRKPSYILQKNTFEVPENQMTILNTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSASGYLTDENEVEFRGFYSAHGSKLNVSTEALQKAVKLFSDIENISEETSAEVDPISLSSSKCHDSVVSMFKIENHSDKTVSEKNNKSQLILQNNIEMTIGTFVEEITENYKRNTENEDNKYTVASRNSHNLEFDGSDSGKNYTVCIHKDETDLPFTDQHNICLKLSDQFMKEGNTQIKEGLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKDFETSDKSFQTASGKNISVTKQSFNKIVNFFNQKPEELHNFSLNSELHSDIRKNKMDILSHEETDIVKNKILKESVPGGTGNQLVTFQEQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTIEITSFSHQRAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNDKNLVSIETVVPPKLLSDNLCSQTENLKTSKSIFLKVKVHENVEKETAKSPAACYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDSQPERINTADYVGNSLYENNSNNTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYISKNKLDSGIEPVLKNVEDQKNTSFSEVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFSTASGKIICVSHETIKKVKEIFTDSFSKVIKENNENKSKICQTKIVAGCYDDCMDDSEDIFHNSLDNDECSMHSHKVFADIQSEEILQHNQNMSELEKVSKISPCDVSLETSDICKCSIGKLPKSVSSTNTCGMFSTGSGKSIQVSDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIHTPKHLISSQKGFSYNVVNSSAFSGFSTASGRQVSISESSLRKVKGMLEEFDLIRTEHSLHYSPTSRQNVSKILPCVDKRTPEHCVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFKQDKQQLVSGAKVSLVENIHVLGKEQASPENVKMEIGKTETFSDVPVKTNTEVYSTYSKDPENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPKNEEMVLSNSRIGKRRGEALISVGEPPIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTTPGQEFLSKSHLYEHLTLEKSSSSLAVSGHPFYQVSAARNEKMRHLITTGKPAKVFVPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDNEIHQFNKNNSNQAAAVIFTKCEEEPLDVITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGCQVPSACSHKQLYTYGVSKHCVKINSKNAESFQFHTQDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSADTSETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPTQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFIYLSDECYNLLAIKFWIDLNEDIIKPHVLIAASNLQWRPESKSSLPTLFAGDFSMFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSEPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSASTPVSAQMTSKSCKGEKEIDDQKKCKKKRALDFLSRLPLPPAVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQITPFKNFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSKDYLRLKRQCTTSLIKEQESSQAGTEECEQNKQDTITTKKYI</mol_seq> | |
1025 </sequence> | |
1026 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">nomascus_leucogenys</property> | |
1027 </clade> | |
1028 <clade branch_length="0.002773"> | |
1029 <confidence type="bootstrap">100</confidence> | |
1030 <taxonomy> | |
1031 <id>9604</id> | |
1032 <scientific_name>Hominidae</scientific_name> | |
1033 </taxonomy> | |
1034 <clade branch_length="0.007654"> | |
1035 <name>ENSPPYG00000005264</name> | |
1036 <taxonomy> | |
1037 <id>9601</id> | |
1038 <scientific_name>Pongo abelii</scientific_name> | |
1039 </taxonomy> | |
1040 <sequence> | |
1041 <accession source="Ensembl">ENSPPYP00000005997</accession> | |
1042 <name>BRCA2-201</name> | |
1043 <location>13:31850770-31940736</location> | |
1044 <mol_seq is_aligned="0">MPVGSKERPTFFEIFKTRCNKADLGPISLHWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFRLDLGRNVPNSRHKSLRTVKTKMDQADDVSCPLLSSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKYVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDENLKKNDRFIPSVTDSENTDQREATSHGFDKTLGNSFKVNSCKDHIGKSMPNVLEDEVYETVADTSEEVSFSLCFSKYRTRNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGTQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPHISSLPKSEKPLNEETVVNKRDEEQHLESHRDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNSIDNGSWPATTTQTSVASKNAGLISTLKKKTNKFIYAIHDETSYKGKKMPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNEEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQDSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDICASNENDKNVELLPPEKYIRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFLDIENDFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDIGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDVLNIDKIPDKNNDYMDKSAGLLGPISNHSFGGGFRTASNKEIKLSEHNIKKSKMFFRDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLPSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKNTFEVPENQMTILNTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVGIKQKFAGLLKNDCNKSAAGYLTDENEVGFRGFYSAHGAKLNVSTEALQKAVKLFSDIENIGEETSAEVDPISLSSSKCHDSVVSMFKTENHDKTVSEKNNICQLILQNNIEMTSGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQETCHGNTSNKEQLTATKTEQNIKGFETFDTSFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSHEETDIVKNKILKESVPVGTGNQLVTFQEQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTCEITSFSHQWAKTLKYRDARKDLELARETIEITTAPKCKEMQNSRNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLTEAKKWLREGIFDGQPERVNTADYVGNSLYESNSNTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVHNDSGYLSKNKLDSGIEPVLKDVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCENKNAAIKLSISNSNNFAVGPPAFRIASGKIICVSHETIKKVKDIFTDSFSKVIKENNENKSKICQKKIVAGCYEALDDSEDILHNSLDNDECSMHSHKVFADIQSEEVLQHNQNMSGLEKVSKISACDVSLETSDICKCSIGKLPKSVSSTNTCGIFSTASGKSVQISDASLQKARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTRQENTAIHTPENLTSQKGFSYNVVNSSAFSGFSTASGKQVSILEGSLHEVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPCVDKRNPEHSVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQTSPENVKMEMGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPKNEEMFLSNSRIGKRRGEPLISVGEPPIKRNLLNEFDRIIANQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFCTTKERQEIQNPNFTAPGQEFLSKSRLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMKHLITTGKPTKVFVPPFKTKSHFHRDEQCVRNINLEENKQKQNIDGHGSGDSKNKINDTEIHQFIKNNSNQAAAVIFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKENLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKFQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENVDILCNEAENKLMHILHANDPKWSTPSKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSFCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSKDYLRLKRRCTTSLIKEQESSQAGTEECEKNKQDTVTTKKYI</mol_seq> | |
1045 </sequence> | |
1046 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pongo_abelii</property> | |
1047 </clade> | |
1048 <clade branch_length="0.004997"> | |
1049 <confidence type="bootstrap">100</confidence> | |
1050 <taxonomy> | |
1051 <id>207598</id> | |
1052 <scientific_name>Homininae</scientific_name> | |
1053 </taxonomy> | |
1054 <clade branch_length="0.019894"> | |
1055 <name>ENSGGOG00000015808</name> | |
1056 <taxonomy> | |
1057 <id>9595</id> | |
1058 <scientific_name>Gorilla gorilla gorilla</scientific_name> | |
1059 </taxonomy> | |
1060 <sequence> | |
1061 <accession source="Ensembl">ENSGGOP00000015446</accession> | |
1062 <name>BRCA2-202</name> | |
1063 <location>13:14169243-14261094</location> | |
1064 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKAVDLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREATSHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKISHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLNISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFGASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQTSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRNETCSNDTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNPTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQLDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGAKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLREAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASDETIKKVKDMFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSTNTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPENEEMVLSNSRTGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKEHQEIQNPNFTAPGQEFLSESHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSSDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKVKQLKFLCSFWEVQRSFLSLNNAFPIKKSLFYSGLENYILVLFKLLRTSSLQWLSFSCFLLIGFIYQKEQQQLGLSFLLILFLAASAQYSRVHDIYINHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPANLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEVRKAMESAEQKEKGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVISVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTR</mol_seq> | |
1065 </sequence> | |
1066 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gorilla_gorilla</property> | |
1067 </clade> | |
1068 <clade branch_length="0.000207"> | |
1069 <confidence type="bootstrap">100</confidence> | |
1070 <taxonomy> | |
1071 <id>207598</id> | |
1072 <scientific_name>Homininae</scientific_name> | |
1073 </taxonomy> | |
1074 <clade branch_length="0.003163"> | |
1075 <name>ENSPTRG00000005766</name> | |
1076 <taxonomy> | |
1077 <id>9598</id> | |
1078 <scientific_name>Pan troglodytes</scientific_name> | |
1079 </taxonomy> | |
1080 <sequence> | |
1081 <accession source="Ensembl">ENSPTRP00000009812</accession> | |
1082 <name>BRCA2-201</name> | |
1083 <location>13:31957353-32040817</location> | |
1084 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLCTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREATSHGFGKTSGNSFKVNSCKDHTGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQTSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQNNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPDKNNDYMDKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTISEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTSVEEITENYKRNTENEDNKYTASSRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITTAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNNLSAKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTINEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSTNTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPENVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSELPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLVTTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQAAAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYMYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAFPWGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAEKKLMHILHANDPKWSTPTKDCPSGPYAAQIISDTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESAQASTEECEKNKQDTITTKKYI</mol_seq> | |
1085 </sequence> | |
1086 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pan_troglodytes</property> | |
1087 </clade> | |
1088 <clade branch_length="0.001811"> | |
1089 <name>ENSG00000139618</name> | |
1090 <taxonomy> | |
1091 <id>9606</id> | |
1092 <scientific_name>Homo sapiens</scientific_name> | |
1093 </taxonomy> | |
1094 <sequence> | |
1095 <accession source="Ensembl">ENSP00000369497</accession> | |
1096 <name>BRCA2-001</name> | |
1097 <location>13:32315474-32400266</location> | |
1098 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQNSVALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPEKNNDYMNKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVAKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELACETIEITAAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSANTCGIFSTASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGTKVSLVENIHVLGKEQASPKNVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAVEIAKAFMEDDELTDSKLPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQAVAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESSQASTEECEKNKQDTITTKKYI</mol_seq> | |
1099 </sequence> | |
1100 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">homo_sapiens</property> | |
1101 </clade> | |
1102 </clade> | |
1103 </clade> | |
1104 </clade> | 1254 </clade> |
1105 </clade> | 1255 </clade> |
1106 </clade> | 1256 </clade> |
1107 <clade branch_length="0.036115"> | 1257 <clade branch_length="0.053524"> |
1108 <name>ENSCJAG00000018462</name> | 1258 <name>ENSVPAG00000000886</name> |
1109 <taxonomy> | 1259 <taxonomy> |
1110 <id>9483</id> | 1260 <id>30538</id> |
1111 <scientific_name>Callithrix jacchus</scientific_name> | 1261 <scientific_name>Vicugna pacos</scientific_name> |
1262 <common_name>Alpaca</common_name> | |
1112 </taxonomy> | 1263 </taxonomy> |
1113 <sequence> | 1264 <sequence> |
1114 <accession source="Ensembl">ENSCJAP00000034250</accession> | 1265 <accession source="Ensembl">ENSVPAP00000000821</accession> |
1115 <name>BRCA2-201</name> | 1266 <name>BRCA2-201</name> |
1116 <location>5:145430371-145527428</location> | 1267 <location>GeneScaffold_1422:28074-80684</location> |
1117 <mol_seq is_aligned="0">MPIGSKERPTFFEIFKTRCNKAVDIGPISLNWFEELSSEASPCNSEPTEESEHKISVYEPNIFKTPQRKPSYNQLASTPIIFKEQGLTLPPYQSPVKELDKFRLDLGRKVPNGRHKSPRTVKAKMDQTDDVTCPLLNSCLSESPVLQCTHVTPQRDKSVVCGSLFHTPKFVKGHQTPKHISESLGAEVDPDMSWSSSLATPPSLSSTVLIVRNEEASETVFPHDTTAIVKCCFSNHDESLKKNSRFIPSVTDSENTNQREATCHGFGKTLGNSFGKVNSCKDYIGKSMPNVLEDEVYETIVDTSEEDSFSLCFSKCRKRNLQKVRTEKTRKKIYEANTDECEKSKSQVKEKYSFVSELEPNDTDPLDSNVANQKLFESASDKISKEVVPSLAYERSQLTLSGLHGTQMEIIPLLHISSCDQSNSEKNLLDAENERKKDFLTSENSLSDISSLPKSEKPLNEERMVNKKDEEQHLESDGDHILAVKQATSGNPLVASSFQGIKKSIFRIRESPKETLSASFSGSMSDPNVKKETEASESRLEIHTVCSWKEDTLCPDSIDNGSWPASITQTSVVLKNAGLISTLKKKTNKFIYAIHDETSYQGKKIQKDQKSEVINSSSQFEANAFEAPLTFANTDSGLLHPSVQRNCSQIDSGEPTLSLTSSSGTILRKCTRNETCCNNIIISQDLDYKEAKCNKEKTQLFITPEADSLSCLQEGQCKNYPKSKEVSDIKEEVLATACHLAQHSEVEYCDTDFQSQKTILHDHENASSLILTPAFKDVLSGKESYRISDELKCNNCEADFELIKNISMENNQDVHALNENSKNIELLPPEKYIIVASPSRYVQFNQNTNLRVIQKDQEETTLISKMTVSPDSEELLSDNENNFVFQVASERNNFALESTEELHEADLTCVNKPNFENSTMVLHADIVDKQATQVSIKKDLDSSNKVYYLAEEKKNSVKQHLEMTLGQDIKSDISLNIDKIPNKNNDYKDKWAGLLHPISNHSFGGSFRTASNKEIKLSEHNIKKSKMLFRDIEEQYPTSSACVEIVNTLALDNQKKLSKPQSIKTVSAHVQSSVVGFDCKNSLTTPQMLFSKEDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQYRKPSYILQNNMFEVPENQMTILNSTSEEYRDADLHLVMNAPSIGQVDSRKQFEGTVGIKQKFAVLLKNDCNKSASGYLTDADEVELRGFYSAHGVKLNVSTEALQKAVKLFSDIESISEETSAAVDPISLSSSKCHDSVVSVFKIENHDEKNNECQLILQNNIEMTTGTFVEEITENYKKNIENEDKHTATSRNTHNLEFDGSDSSKNDTVHIHKDENDLPLTNQHNIYLKLSGQFMKEGNTQIKEDLSDLTFLEVVKAQETCHGNTSNKEQLTATKMEQNIKDVGTFDLSFQTASGKNISISKESFNKVVNFFDQKPEELHNFSLNSKLHSDIRKNKMDILSYEETDIVKNKTLKESIPVGTGNQLVTIQEQPKSNIKKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKGQDTGEITSFSHQGAKTLKYREAYKDLELVRETVEIATTRKHEEMQNSLSNDKNLVSIETVVPPKPLSDNLYRHTESLKTSEGNFLKVKEHENVEKETAESPATCYRNQSPYSVIENSALAFYTYCSRKTSVSQASSLEAKQWLREGEFDDQPENINTVDFVGNSLYENNSNNTITEGNKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYRSKNNLDSGIEPVVKNVEDQKNTRSSKVTFNVKDANAYPQTVNEDTCVEELVTSSSSCKNKNAAIRLSTSNCNNSEVGPHAFSTASGKIVCVSHETIKKVKEKFTDSCSKVIKENTENKSNNCQTKILAGCYKALNESEDIFHNSSGNDECSMHSHKVFADIQSEEILQHNQKMFGVEKVSEIPPCDVSLETSGIYKFSMGKLPKSVLSTNTCGIFSTASGKSVQVSNASLQKARQVFSEIDDSTKQLSSEVLFTNNEHSDQLTREENTATQIAEHLIPSQKGFSYNVNSSAFSGFNTASGKQVSISESALHKVKGMLEEFDLIRTEHSLHHSPISRQNVSKILPCVVKRNPEHCVNSEMEKTCSKEFKLSNNFNIEGGSSEHNQSIKVSPYLSQLKQDKQQLVLGTKVSLVENIDVLGKEQASLENIKMEIGKTETFSDVSVKTNTEVCSTYSKDSENCFETEAVEIAKAFMEDDELIDSELPSHASHTLITCPKNDEMVLSNSRIGKRRGEAIISVGEPPIKRSLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFTHHVSLEPITCVPFCTTKERQKIQNLNFTAPGQESLSKSHLYEHLTLEKSSSSLAVSGQPFYQVPATRHEKMRRLIATGKPTKVFVPPFKTKSHLHRDEQCVRNINLEENKPKQNIDGHGSGGGKNKINDSEIHQLNKNNSNQAATVIFTKREEEPLDLITSLQNARDIQDMRIKKKQRQCIFPQPGSLYLTKTSTLPRISLKAAVGSQFPSACSHKQLYMYGVSKHYVKINSKNAESFQFHTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDKSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISETSSNKTSSADTQNVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKHAEAQQKRLEALFTKIQEEFEEHEENKTKPYLPSRALTRQQVHALQDGAELYEAVKNAADPAYIEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSRNVTTVWKLRIVSYSKKAKDSVILSIWRPSSDLYSLLTEGMRYRIYHLATSKSKSKSERANIQLVATKKTQYQQLPASDEILFQVYQPRESLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLPTLFAGDFSVFSASPKQGHFQETFNNLKNTVENIDIFCNEAENKLMHILQANDPKWSTPTKDYNSEPHTAQIILPAGNKLLMSSPNCDINYQSPLSLRMPKSKSVSTPVPAQMTSKSCKGEKEIDDQKSCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELNSPQVTPFKKFNEISLLESNSIADEELALINTQALLSGSIGEKQFISVSEFTRTAPTSSKDCLRLKRCSTTSLIKEQESSRAGTEECENDMQDTSTTEK</mol_seq> | 1268 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELSSEAPPYNSEPSEESEYKISSYEPNLFKTPQRKPYHHLASTPIIFKEQGPTLPLYQSPLKEQGKFRLDLGKDVTNSKHKSFCTMKAKVDQANDVTSPPPNSCLSESPVLQYTHETPQREKSVICTLFHTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEEASAATFPSDTTAILKGCFSNHDQSLKKNDRFIPSGPDNENQRKAKSHELEKILEESFGNGNSCKDHFEKSMPNVLEDEVHETAADISEEDSFPVCVSKYKRRNIRKVKTGKTRKNIFNKTKTNEYEEAEKQMTENKHSFVSEMGPNDSDPLDSNVTNQKLFGNGADKISQEVIPSSASEWSQLTLSGLNGTQMEKTSLLHISSCDQNNSEEDCIGTEKEFINFITSENYLPHISSLSKTVKILNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFKEEEASKSGLEIQTICSHKEDSLCTSSVDNGSWPATTKNTSVALKNAGLISTLKKKTKRFIYAINDKTSYQGLKMQRDQESELTHSSAQLEADHFETPLTFTNIDSGLLHSSIQKHCLQNDSEDPPLSLTSSFGTILRKCNNKIVSQDLDYKEAKFSKEKLESFPTETDYMSCQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEDCSDTHFQSQELLHDNDNTTVLTTVFNDLSNPVVISRGKESYKMSEKIKPKNSEAGSELTKNISLENSQEACILKEDSRKPELFSPEQYVTAASPLTKIQFNENTNLTVFQKKQETTLISKITVNSNSEELFPDNENNFVFQITSEKSIPILENTKELHEADIICLREPVLKNSATAARTDLGDKQAAKVSITNNFVSSNTVHDLTEKSRNSVKQQPKMTLSQDSKSDVSLDINMKSNRNNDCMDKWARLSDSISSHSFGNGFRTASNKEIKLSEHNIKKSKMFFKDIEEHFPTSLACIETVNTLSLKSQKKPSRPHAVDSQSMNTISGCVQNSAFICDSENSHTAPILSLKEDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSDIIQNNPFEMPENQMSVLKTTSEEWKDVDLPLTVNVPSSSQVDSSKEFEDRVGDKQKFACLSTTNCNKSTSGNSTDKNEVEFRGFYSARGTKLSISSEALQKAMKLFSDIENVGGTPAEVDPRIFSLSKCNNSDVSEFKEEDYSNDKNLSEKNNKCQLVVQNNIEMTAGIFVEENTEDYKRNTENEDNECIGFVCNLRESDGGSSSKNDTVSIHKDEDVLPCTDQHNMYLKSSRQYMMEGNSQNKEDLSDLTCLEVVKAEETFHVNMSNKSQSTANKMRQNIKNFDTFGLSFQTASGKNISISKESLNKVVNFFDEKCTEEEMNNFSDSSNSELLSGINTNKIDISSHEELDKVKDKILKESDSIGIENQLLTLQQGQEYEIKKIKEPTMLGFHTASGKKVKIVKESLDKVKNLFDEKKQDNSEVTNFSHQGAKTLMDREVCKEGFELACETVDVTAQKHEEMQNSLEEKKLVSEESAVPPWLLSDHLYRQTENLSITNSISLKVKVHENIEETAKSPMTCYTNQPTCSAIENSALAFYTGHGRKISVSQASLFEAKKWLREGELDDQTEKKNSADYVGNLSCGNHSNRITTENDKNFSEEQDPTYLSNSMSNSYSCHSDFCHSSEVFNKSEYLSKNKMGNSGIEPVVQNVKDRKNISFSEVMSTVREANTYPQAVDESTCVQKLVTNSSPCRNKNTATEMVISDSNNFEIEPPAFGTASDKTKVRERLTDNGGKVIKQNTESKSDTCQTKIVTGSHKALEDSEDITFPDSPESEEHRMRSHDVSPDIQSEPILCHDPGMSGLEKVSEIPPFHINLKTSDICKLNVEKHPRSVSSMNACGVFSTASGKSVHISDAAFQKAKQVFSKIEDDAKQLLSKVSFKSNEEQSDKFSGENTKIHTPQNLLSSAFSGFSTASGKQVPVSESSLCKVKGMFEEFDLIRTERSLQHSPTSRQNESKILPLSCIDKRTPEHSVSSKAEKDYSKEFKLSNNRNVESDSSENNHSIKVFPSLIQCKQDKQQLVLGTKVLLVENFDLLGKEQILPKNIKMEIGKAETFPNLPVKTNTEICSTNSKDLENYFETEAVDIARAFMEDGELTDSELLSHAKHSLFTCQKNEEAVLLNSGIGKRRGGALATVGEPPTKRNLLNEFDRIIENQEKSLKPSKSTPDGTVKDRRLFMHHTSLEPVTCGPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQKNIDERSSGDSENNGSEIHQLNKSNSNQTAAVMFTKGDKEPLDLITNLQNARDIQDKQIKKKQKQRIFPQPGSLYLAKTSTMPRISLKVAVEGRVPSACSHKQYMYGVSKHCVKINSKSAESFQFHTQDYFGKEGLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPQLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLFQLKYRYDVEIDRSRRSAIKKIMEKDDTAAKTLVLCVSEIASLSTDTSETPSSKTSGVDTTKAAVVELTDGWYAIKAQTDPPLSALIKNGRLTVGQKVIIHGAELVGSPDACTPLEAPESLMLKISTNSTRPARWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDIIVQRAYPIQWMEKTPSGLYIFRNEREEEKEATKHAEAQQKKLEALFTKLQAEFEEHEDNVTERYIPPRALTRQQVRALQDGAELYEAVKNAADPGYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQGEQILPRDVTTVWKLRIISYKKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLAASKSKSKSERANIQLTATKKTQYQQLPASDEILFQVYQPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHMLIAASNLQWRPEYKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSPSEMKYQSPLSLSKPKGKSISTPVSAQMTSKSCCKGEKEIDDPKSCKKRRALDFLSRLPVPPPVSPICTFVSPAAQKAFQPPRSCGTRYETPIKKKELNSPQMTLLKKFNDISLLEDDSIADEELALINTQALLSGSSGEDQRMSINESTRTAPTSAEDHLTLKRHYTTRGIKERENSQARTEEHETNMQDTSTKKYLQ</mol_seq> |
1118 </sequence> | 1269 </sequence> |
1119 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">callithrix_jacchus</property> | 1270 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">vicugna_pacos</property> |
1120 </clade> | 1271 </clade> |
1121 </clade> | 1272 </clade> |
1273 </clade> | |
1274 <clade branch_length="0.027611"> | |
1275 <confidence type="bootstrap">100</confidence> | |
1276 <taxonomy> | |
1277 <scientific_name>Carnivora</scientific_name> | |
1278 <id>33554</id> | |
1279 <common_name>Carnivores</common_name> | |
1280 </taxonomy> | |
1281 <clade branch_length="0.054947"> | |
1282 <name>ENSFCAG00000025587</name> | |
1283 <taxonomy> | |
1284 <id>9685</id> | |
1285 <scientific_name>Felis catus</scientific_name> | |
1286 <common_name>Cat</common_name> | |
1287 </taxonomy> | |
1288 <sequence> | |
1289 <accession source="Ensembl">ENSFCAP00000019777</accession> | |
1290 <name>BRCA2-201</name> | |
1291 <location>A1:11398212-11455078</location> | |
1292 <mol_seq is_aligned="0">MPIGCKERPTFFEIFRTRCNKADLGPISLNWFEELCLEAPPYNSEPTEESGYKISYEPNLFKTPQRKPCHQLASTPIIFKEQGLIPPIYQQSPLKELGKDITNSKHRSCCTMKSKMDQTNDVTSPPLNSCLSESPLLRSTHVTPQREKSVVCGSLFHTPKLTKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASAAVFPNDTTAIFKSYFCNHDESLKKNDRFIPSGPDSENKSQREAKSQGLGKMVGNSCDKVNSCKDPFGNSTLNVLEDGVRERVADVSEEDSFPLCVPKCKTRNLQKIKTSKTRKNIFNETTDECEEAKKQMKENKHSFVSEMEANASDPLDSNVTNQKPFGNGSDKISKEVVLSSASESCHLTLSGLNGTHMEKLPLLCISSCDQNNSEKDLITTEKECTNFIILEDSLPQISGVPKCTEKILNEEIVVNKIDEGQCLESHEDSILAVKQAVFETSLIASPLQGIRKSIFRIRESPEETFSAVFSNNITDPNFKEEHEASESVLEKHSICSQKEDSLSTSSLDNGSWPATIKHTSVALKNSGLISTLKKKTKFIYVVNDETSYQGLKTQKDQQSGLMNYSAQFEANVLEGPLTFANADSGLLHSSVKKTCLQNDSKEPILSLTNSFGTLLRKVSNNGSSSPNNKIISQDLDYKEAKIKKEKLQSFISTETNCLSSLQEKHCEDDTKSQRVADRKEEILPAVSQPSVPYSEVEDSGIHFQTLKSFSSDPDKSSQLTPHPRDPPSNPVGLSRGRESYEVSETLKCKNHEAGFELTKTMENNQEIHVLNEHAKKAKLLSTEKYVTEASPSMKVPFNQNAHLTIIQKDQKETTLISKITMNPNSEELFPDGDNFVFKITKERNVPVLGSIKELQDSDLCCVKEPVLENSTMVVYTDMDDKQAAKVSITKGFDSSNIDDLTEKDRNSIKQQLRMTLDQDSKSDITLDSDMKSNGNNDYMDNWARLSDPILNHNFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEERYPTNLACIEIVNTPLESQEKLSKPHILDPQSINTVSGCVQSSAYVSDSENRHTTPPTLSLKRDFDSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHLKQKNPCEMPEKHLTISNTTPEEQKDGHLRLTINALSISQGDSSKKFEGIIGGKQKLACLSKTSCNKSASGHLTGKNEVEFRGFYSARGTKLNVCSEALQKAKKLFSDLENISEETSVEVGIRSFSSSKCNGSVSMFKKENCNNEKKLNEKNNKYRLILQNNIEMTTGIFVAEDTEGYKRNIENKANKYTDASRNVYNFREADGSDSSKNDTVYIHKEENGLPYIDQHDIDLKLSSQFIKEGNTQIKEGLSDLTCLEVVKAEETLHVNTSNKEHLTANTMGRITKDFDIFDVSFQTASGKNIRVSRASLNKVTNLLDQKCTEEELNNFADSLNSELLSGIDINKADISHHEKMENTERKDKMKESDLTGTENKSLTLQQRPEYEIKKIKEPTILGFHTASGKRIEIAKESLDKVKNLFDEQEQDKSEMTNFSHRGTKMSKGREECEGGLRLACKTIEITPASKEEEMQKPLEKNLVSNEIVVVPRLLSDNLYKQTENLKIPNRASLKVKVHENTGKETAKKPTTCTNQSTYSATENSALSFYTGHGRKISVSQSSILEVKKWLRGGELDDQPEKTVYNISEYLPKSKVDNSGIEPVVRNVGERENTSVSEIMFTVREADTDPQSVNEDICVQRLVTNFSCKKENTAIKVTVSDSNNFDSTQKLNSDSNDAVPVYTTASSERVLVAHETKVTEGFTENCSMAIKQTTKSKPGKIVAGYRKAPDDSEDTICPNSLDGAECSSPSHKDFAETQSEQTLQLNQSISGFKKRSEIPPHQINLKTSDICKLSTGKCLQSISYTNACGIFSTASGKCVQVSDAALQKARQVFSKVEDSAKQPFSKVSFKHNEDHSDKFTREENTMIHTPQNLLSSAFSGFSTASGKQVPVSESALCKVKGILEEFDVMRTECGPQRSPTSRQDVSKMPPPSCVDNRTPEHSVNSKLEKAYNKEFKLSSNSKIENGSSENHSVQVSPYPSQFKQDKQLIQGNKASLVENIHLLEKEQALPKNIKMEIGKTEAFPNLPLKTDTAIHSTDSKDPENYFETETVEIAKAFMEDGELTDADLLSHARHFLPTCQHSEETLVSNSRRGKRRGVLVSVGEPPIKRNLLNEFDRIIKNQEKSLKASKSTPDGIIKDRSLFMHHISLEPVTCGPFSTTKKRQEIQNPNFTAPGQKFLSKSHFYEHLALEKSSSNVSISGQPFCTVPATRSEKRGHSITPSKPVKVFVPPFKTKSHFLQDEQHISKNTHVEENKQKPNNIDERSSGDSKNNINNSEIHQLNKNNSSQAATMVFTKCEKEPLDLIASLQNARDIQDMRIREKRKQRIFPQPGSLYLAKTSTVPRISLRVAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEVQWAKEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYYDMEIDRSKRSAIKKIMERDDTAAKTLVLCISETISSSTDLSETSGSKTSGVGTKNVGIVELTDGWYAIKAQLDPPLLALVKKGRLTVGHKIIIHGAELAGSPDACTPLEAPESLILKISANSTRPACWYAKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVVIQRTYPIQWMEKTPSGLCIFRNEREEEREATKYAEAQQKKLEVLFNKIQAEFEKHDGKMGFCALQDGAELYEAVKNAPDPASLEAYFSEEQIRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQMLPRDVTTVWKMRIISYGKKEKDSVTLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSERAHIQLTATKKTQYQQLPASDELLFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGFAPLVYLSDECHNLLAIKVWTDLNEDIVKPHTLIAASNLQWRPESKSGIPTLFAGDFSRFSASPKEGHFQETFHKMKNTIENVDTFCNDAENKLVHILNANSPKVSTPTKDYASEPHTIQTVLGLGNKLSMSSPNSEMNYQSPLSLCKPKAKSVPTPGSAQMTSKSCYKGERELDDPKTCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKRELNSPQMTPLKFNDTSLVESDSIADEELALINTQALLSGLAGEDQLMSLNDSPRTAPTSSKDYVRPKSYPTAPGIRDCENPQASTEGGEPDVQDTDTVKRSSMRLQRRQQQT</mol_seq> | |
1293 </sequence> | |
1294 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">felis_catus</property> | |
1295 </clade> | |
1296 <clade branch_length="0.010333"> | |
1297 <confidence type="bootstrap">100</confidence> | |
1298 <taxonomy> | |
1299 <scientific_name>Caniformia</scientific_name> | |
1300 <id>379584</id> | |
1301 <common_name>Caniforms</common_name> | |
1302 </taxonomy> | |
1303 <clade branch_length="0.009079"> | |
1304 <confidence type="bootstrap">100</confidence> | |
1305 <taxonomy> | |
1306 <scientific_name>Caniformia</scientific_name> | |
1307 <id>379584</id> | |
1308 <common_name>Caniforms</common_name> | |
1309 </taxonomy> | |
1310 <clade branch_length="0.028192"> | |
1311 <name>ENSAMEG00000009390</name> | |
1312 <taxonomy> | |
1313 <id>9646</id> | |
1314 <scientific_name>Ailuropoda melanoleuca</scientific_name> | |
1315 <common_name>Panda</common_name> | |
1316 </taxonomy> | |
1317 <sequence> | |
1318 <accession source="Ensembl">ENSAMEP00000009909</accession> | |
1319 <name>BRCA2-201</name> | |
1320 <location>GL192584.1:1852747-1917315</location> | |
1321 <mol_seq is_aligned="0">MPIGCKERPTFFEIFKTRCNEADLGPISLNWFEELSLEAPPSNSEPTEESGYKINYEPNLFKTPQRKPYHQLASTPIIFRDQGLIVPTYQQSPLKELDKYRLDSGKDITNSKHKSCCTMKSKMDQTNDVTSPPLNSCLSESPVLRCAHITPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVVRDEEASAAVFPNDTTAIFKSCFSNHDESRKKNDRFIPSGPDKENKNQREAKSQGLGKMLGNAFGKVNSCRDHFGKSTPSVLEDEVHETVADVSEEDSFSLCVPKYKTNLPKIKTSKTRKNIFNETKTSEYGEAKKQMKENKHSFLSEMEPNDSDPLDWNVTNQKPFGNGSNKISKKVVPSSASEWSHLTLSGLSGTQMEKTPLLHISSCDQNNSEKDFTITEKESTNFITLENSLPQISSVPEYSEMTLNEERVVNKIDEEQCLGTHEDSILSLKQAVTETTLIASPLQGIRKSIFRIRESLEETSSAVFSNNMTDPNSKEELEVPESGLEKHNICSQKEDSLGSVDNGSWSATIKHTSVALKNSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQESGLTNHSAQFEANAFEGQLTFTNADPGLLHSSPVKKNCLQNDSEEPTVSLTSSFGTVLRKVSNNGTSSPNGKTVPQDVDYKEAKTNNEKLQSFIITETDCLSSLQEKHCEDDAKSQRVSNIKQKVLPAVSHPPVPHSEVEGSGIHFHSPESSSSDHDNTSLLTPSSREPPSNPVVISRVKESHKMSEKLKCKNCEAGFELTKSIPMEKNQEIHVLNANSKNAKLLSSEEYVTVASPSMKVQFNQNANLTTIQKDQKETTLISKIAVNPNSEELFPDDENNFILEVTNESNIPVLGNIKELHDADLCCVREPVLKNSTMMMYTDMEDKQTAKVSIMKDFDSSNIDDLTEENRNGIKQQLKMTLDQDSKSDITLDIVRKSNGNNGYMNNWARLSDPISNHSFRNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTNLACIEIIDTSSLESQKKLSKPLALDPQSINSVPGFVKSSTYVSDSKSGHAAPPTLSLKRDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFKKPSHIIQKNPFEMPESQLTILNSTSEERRDTDLHLTINAPSITQVDSSKKFEGILGGKQKFACLSRTNCNRSASGYLADKNEVQFRGFYSARGIKLNVGSEALQKAKKLFSDLENISEETSVEVDTRIFYPSKCNDSAVSMIQIEDCNNDKNLNEKNNKSQLILQNNIEMTAGIFVEETTESYKRKTENEDNQCTDASRNTHNLESVGSDSSKNDTVYIHEEENSFPCIDQRSIDLKLSSQFMKEGNTQIKEGLSDLTCLEVAKAEETFHVNTSNKQQFTANTMGQSIKDLDIFDVSFHTASGKNIRVSKESLNKVINLLDQKWTEEELNNFSDSLNSELLSGTDINKTDISSHEKTENTERKDKIMKESDLTCTKNKLPTLQQRPESEIKKITAPTMLGFHTASGKKIEIAKESLDKVKNLFDEKEQDYSGITNFSHQEAKMSKDREECKDGLELACETIELTTAPKYEEMQNSLEEKKLVCNEIAVGPMLLSDNLYKQTENLKTDCSSLKVKVHEDTEKKTGRKPTIYTNQSTYSAIENSPLAFYTGHGRKISVSEASLFEAKKWLREGEVDDQPEKINAAKVICLKEYVDDYVENPSCGNSSSSTITENDKNHLSEKQGSTYLSNSTVSNRYSCHSDFSYSSEVYNKSEYLLKNKVDTPGFEPVMNNVRERENTSFSEIMSTVREVDTDPQSVNEDICVQRLVTSSSCKNENTAIKVAISDSNNFNSIPKLNLDSNNAVPAYGTASSKRIFVAHQTKVTERFTDNCSMVIKQKTKSKSDTYHVKIVAGYPNALGDSEDIVFPNSLDNAEHSLSSHKAFADIQSEQTLQLNQSISGLEKVSEIPSCQNNSKIPNICKFSTGNLPKSVPCTNACGIFSTASGKSVQVSDTALQKARQVFSKIEDSAIQLFPKVSFKNNEQSDKFTNEENTMLHTSQNLLSSAFSGFSTASGKQVPVSESALCKVKGMLEEFDLIRTDCGLQHSSTSRQDVSKIPPPSCIDKRALEHCGNSKLEKAYNKEFKLSSNCNTESASSENHFSIKLSPCPSPLKQDNQQLLLGSRVSLIENIDLLGKEQALAKNIKTEIGKTETFPNLPVKTNTEICSTYSKDPENYLETETVEIAKAFMEDGELTDSELLSHAKHSLFTRQNTKETALFSSRIGKRRGDALVSLGEPPIKRNLLNEFDRIIKSQEKSLKASKSTPDGTLKDRSLFMHHISLEPITCGPFRTTKERQEMQNPNFTAPGQEFLSQSHFCEHGALEKSSSNLSVSGQPFCTVPATRNEKRRHLNTPGKPVKVFVPPFKTKSHFHRGEQCISKNTNLEENKQNLKNIDEHGPGDSETNINDSGIHQLKKNNSNQAAATIIFTKGEKEPLDLITNLQNARDTQDMRIKKKQRQHIFPEPGSLYLAKTSTVPRISLRGAVEGQVPSACSHKKLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEGLWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDRSRRSAIRKIMERDDTAAKTLVLCVSEIISSSTDISETSSSKTSSVGAKKGGVVELTDGWYAVKSQLDPPLSALVKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKHDENTTKRYVPSCALTRQQVCALQDGAELYEAVTNAPDPNYLEDYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSRNVTTVWKLRIISYGKKEKDSVSLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKANIQLTATKKTQYQQLPASDEILFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPLVYLSDESHNLLAIKFWTDLNEDIIKPYTLIAASNLQWRPEAKSGIPTLFAGDSSRFSASPKEGHFQERFLKMKNTIENIGMFCNEAENKLMHILNANDPKLSTPTKDYASELHAAQTVLGMGNKFLMSSPSSEMNHQSPLSFCKLEETSVPTPGSAQMTSKSYCKGEKEMDDPKNCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRTCGTKHETPIKKKELNSPQMTPHKFNDLSLLESDSIADEELALINTQALLSGLAGENQLMSLSDSARTAPESSKDYVRPKRHCTASGLSGCRSPQARTEERETDGQDASTAKRASMRLQRRQKQK</mol_seq> | |
1322 </sequence> | |
1323 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ailuropoda_melanoleuca</property> | |
1324 </clade> | |
1325 <clade branch_length="0.031608"> | |
1326 <name>ENSMPUG00000001945</name> | |
1327 <taxonomy> | |
1328 <id>9669</id> | |
1329 <scientific_name>Mustela putorius furo</scientific_name> | |
1330 <common_name>Ferret</common_name> | |
1331 </taxonomy> | |
1332 <sequence> | |
1333 <accession source="Ensembl">ENSMPUP00000001928</accession> | |
1334 <name>BRCA2-201</name> | |
1335 <location>GL897055.1:4516525-4575778</location> | |
1336 <mol_seq is_aligned="0">MPIGCKERPTFFEIFKTRCNEADLGPISLNWFEELSLEAPSYNSEPTEESGYKISYEPNLFKTPQRKPYHQLASTPIIFQEQGLIVPMYQQSPLKELGRNRLDSGKDITNSKHKSFCTMKSKMDQTNDVTSPPLNSCLSESPFLRCTHVTPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASAAVFPNDTTAICKSCSPKHDDSLKKNDRCIPSGPDKENKNQREAKSQGLGKMLGNSFGKVNSCKDHFGKSTPNVLEDEVCETVADVSEEDSFSLCVPKYKTRNLPKIKTSKTRKNIFNETKTNECEETKKQMKENKHSFLSEMEPNDSDPLDWCVTKPKPFGNGNEKISKEFIPSSASEWSHLTLSGLSGTQMEKTPLLHSSSCDQSNSEKDFTITEKESTNFITLGNSSPQISSVPKYSEITLNKETVVNKIDEEQCLGSHEDSVLSGKRTISETTIIHSPLHGIRKSIFRIRESPEEMSSAMFSNHMTDLNSKGEIDTPESTLEKYTICSQKEDSLGSIDNGSWPATIRRTSGALKTSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQELGLTNHSDQSEANAFEAPLTFTNADSGLLHSSSVKKNCSQNDSEEPALSLISSFGTILRKVSNNGTSSVNNKTVPQDLDYKETKINKEKLQSFITTETDCLSSLQEKHCEDDAKSQRVSDTKEKVLTAVSYPPVPHSEVEGCGIHFQSPESFSSEHDNTSLTPSSRDPPSNPVMTCRGKESYKISEKLKCKNHEGGFELIKNIPMEKNQEMHVLNANSKNTEVLSTEKYVIVASPSMKVQFNQNTNLATIQKDQKETTLISKIAVNPNSEELFPNDENNFVLEITNESHIPVLGNIKELHDADLCCVREPVLKNSTMMVYTDMDDKQAAKLSIMKDFDSSNIDDLTEKNGNSIKQQLKMTLDQDSKSDITLDVVRKSNGNNDYMNNWARLSDPVSNHSFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEEHYPTNLACIEIVNTSSLESQKKLSKPLTLDPQSINSVSVFVQSSAYVSDSESGHIAPPTSSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYIIEKNPFEMPENQLTILNRTSEECRNTDLHLTINAPSIIQVDSSKKFEGILGGNQRSACLSRTNCNRSACGSLADKNEVKFRGFYSARGTKLNVGSEALQKAKQLFRDLENIIEEPSVEVDTRSFSSGKCNDSAVSMIQIEDCNNDKNFNEKNNKNQLILQNNIEMTAGIFVEENTEGYKGNTENEDNQRTDASGNTHNLESVSSDSNKNDIVYIHEENSLPCIDQHNIDQKLSSQLMKEGNTQIKECLSDLTCLEVAKAEETFHVNTSNKQQFTANTMGQNIKDFDIFDLSFQTASGKNIRVSKESLNKVINLFDQKWTEEELNNFSDSLNSELLSGVDINKIDISSYEKTENSERKNKIMKESDLIGTENKLLTLQQRPESEIKKIKEPTMLGFHTASGKKIEIAKESLDKVKNLFDEKEQGDSGVTNFSHQGAKMSKDREKCEDGLELACETIELTAPKYEEMQNSIKEKKLVSSEIVVAPRLLSGNLYKQTENLKISDQDSLKVKVHENTEKETAKNHMIYTNQFTYSAIENSPLAFYTGHGRKISVSETSLFEAKKRLREGELDDKPEKINTATVICLKEYPDDCVENPSCGNSSSSTISENDKNPPSEKQGLTYLSNSTVSNRYSYHLDFCHSSEVYKKSEYLSKNKGDNSVIEPVVKNVRENTIFSEITSTVREADTDPQIINEDICAQKLVTNSLCKNENTAIKVAICDSNNFNSIQKLNSDSNNAIPAYSTASSKRVFVAHQTKATEGFTNNCSMIIKQNPKSKSDTCHMRIVAGYPNTLDDSEDIIFPDSLDDAEHQSSSQKVLADIQSEHTLQLNQSISGLEKVSEIPTCQNNSKTSDTCKLNTGKLPKSVSCTNACGIFSTASGKSVQVSDAALQKARQVFSKIEDSAKELFPKVFKNSEHSDKFTNEENAMLQTSQNLLSSTFSGFSTASGKQVPVSESALCKVKGMLEEFDLIRTECGLQHSSTSRQDVSKIPPPSCIDKRTPEQCGNSKLEKAYNKEFKLSSHCNIERESSENHHSIKVSPCQSQLKQDKQQLLLGSKVSLVENIHLLGKEQDLPKNIKTEIGKTETFPNLPVKRNIEICSTYSRDPENYLETETVEIAKAFMEDGELTDSELLSHAKHSLFTCQSTEEMVLLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIKNQEKSLKASKSTPDGILKDRSLFMHHISLEPITSGPLRTSKERHEMQNPNFTISGQEFLSKSRFYEHLALEKSSSNLSVSGQPFCTVPATRNEKRRHLNTPAKPVKVFVPPFKTKSHFHRDEQCISKNTNLEENKQNPEKIDEHGPGESETNINDGGIHQLKKNNSSQAATIIFTKCEKEPLDLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTVPRISLRGAVEGRVPSPCSHKQLYMYGVSEHCVKINSKNAESFQFHTEDYFGKEELWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDRSRRSALKKIMERDDTAAKTLVLCISEIISSSVDISETSSSKTNSMGTKKVGIIELTDGWYAVKAQLDPPLSALVKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKIAANSTRRARWYAKLGFSPDPRPFPLSLSSLFSDGGNVGCIDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKHDENITKQCRPSCALTRQQVCALQDGAELYEAVANAPDPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSRNVTTVWKLRIISYGKKEKDSVTLSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKVNIQLTATKKTQYQQLQASDEILCQIYQPREPLNFNKLLSPDFQPPCSEVDLVGFVISVVKKIGPSLLHPKDFEPGLAPLVYLSDECHNLLAIKFWIDLNEDIIKPHTLIAASNLQWRPEAKSRIPTLFAGDFSRFSASPKEGHFQEIFHKMKNTIENIGMFCNDAENKLMHILDTNGPMLSTPTKDYASEPYTAQTVLGMGNKFLMSSPSGEMNYQSPLSLSKPKEKSVPTTGSAQMTSKSYHKGEKEMDDPKNCKKRKALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRACGTKYETPIRKKEFNSPQMTPLKFNDLSLLESDSIADEELALINTQALLSGSAGENQLMSLSDSTKTAPENLKDYFRPKRHSLASGATGCWSPQAHTEERETNVQDASSMKRASVRLQRRQKQK</mol_seq> | |
1337 </sequence> | |
1338 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">mustela_putorius_furo</property> | |
1339 </clade> | |
1340 </clade> | |
1341 <clade branch_length="0.042316"> | |
1342 <name>ENSCAFG00000006383</name> | |
1343 <taxonomy> | |
1344 <id>9615</id> | |
1345 <scientific_name>Canis lupus familiaris</scientific_name> | |
1346 <common_name>Dog</common_name> | |
1347 </taxonomy> | |
1348 <sequence> | |
1349 <accession source="Ensembl">ENSCAFP00000009557</accession> | |
1350 <name>BRCA2-201</name> | |
1351 <location>25:7734450-7797815</location> | |
1352 <mol_seq is_aligned="0">MPVGCKERPTFFEIFKTRCNQADLGPISLNWFEELSLEAPPYNSEPTEESGYKISYEPNLFKTPQRKPYNQLASTPIVFREPIYQQSPLKELDKYRLVSGKDITDSKHKSCCTMKSKMDRANDVTSPPLNSYLSESPVLRCTHVTPQREKSVVCGSLFHTPKLMKGQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLIVRDEEVSAAVFPNDTTAIFKSCFSNHDESLKKNDRFIPCGPGKENKNQREAKSQSLGNSFGKVNSTKDHFVKSTPNVLEDEVHEKVLDVSEEEDSFSLCVPKYKTRNLQKIKTSKTRKNIFNETKTSECEEAKKQMKENKHSLVSEMEPNDSHPLDWNVTHEKPFGNGTDKISKEIVLSSASGCSDLTLSSLNGAQMEKTPLLHTSYDQNNSEKDLIITDKECTNFITLENSWPQISNVPKYSEKTLNEEIVVNKINEGQCLESHEDSVVSVKQAIYETTLIASPLQGIRKSIFRIRESPEGMSNAMFSNNMTNPNFKEPEASESGLEKHTICSQKEDSLCTSSIDDGSWPATIKHTSVALKNLGLISSLKKKTKKFIYVINDETSNQGLKTQKDQESRLINLSTQFEANAFEGPLTFTNADSGLLHSSSIKKNCLQNDSEKPALSLTSSFGTILRKVSSNGASSPNNKIISQDPDYKEAKINKKKLESFITTETDCLSSLQEKHWEDDAKKPRVSDIKEKVLPTASHPPVPHSEVEGNDIHFQSPESFSFDCDNTSLLTPSSRDSPSSLVVMSRGKESYKISEKLKCKNHETGFELTKNIPMEKNQDIHVLNADSKNAKLLSTEKHITVASSSVKVQFNQNANLTTIQKDQKETTLISKITVNPNSEELFPDDENNFVLKITNESNTPVLGNTKELHDSNLCCVRDSVPKNSTMVVCTDLDDKQTAKVSIMKDCYSSSIDDLTERNRSTIKQQLKMTLDQDSKSDITSDIVRKSNGNSDYMDNWARLSDPISNHSFENGFKTASNKEIKLSENNIRKSKMLFKDIEEHYPTNLACLEIVNTSSLESQKKPSKSHALDPQSINIISGFVQNSTYVSDSESGHTAPPTLSLKQDFDSNRNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIIQKNPFEMPENQLTILNSTSKEWKDDDLHLTTNAPSISQVDSKKSEGIIGGKQKFACLSRTSCNRSASGYSTDKNEVEFRGFYSARGTKLNVGSEALQKAKKLFSDLENINEETSVEVDRSFSSSKYNDSVSMIQIEDCNDKNLNEKNNKCRLILQNNIEMTTDIFVEEYTESYRRNTENEGNQCTDAGRNTCNSESDGSDSSKNDTVYIHEEENGLPCIDQHNIDLKLFSQFMKEGNTQIKEGLSDLTCLEVMKAEETSHVTMSNKQQLTANTGQNIKDFDTFYLSFQTASRKNIRVSKESLNKARSLLNQKWTEEELNNFSDSLNSELLPGIDIKKTDISNHEVIENTERKDKITKESDLIGTENILLILQQRPESKIKKIKESAVLGFHTASGKKIEITKESLDKVKNLFEEKEQDNSEITNFSHRGAKMSKDREECKDGRELACGTTEITTTPEYEETHSSLEKKKLVSNEIAALRPRLLSDNLYKQTENLKISDHASQKVDVHENTEKETAKKPTMYTNQSTYSAIENSPLTFYTGHGRKISVSEASLFEAKKWLREGEWDDQSERINAAKVNCLKEYPDDYVENPSCGNSSNSAITENDKNHLSEKQGSTYLSNSTMSNSYSYHPGFCHSSEVYNKSEYLSRSKIDNSGIEPVIKNIRERKNIGFSEIMSPGREADTDPQSVNEDICVEKLATNSSCKNKNTAIKVAISDSNNFNTIQKLNSDSNNSVPAYSTVNSKRVFVAHQTKVTEGFTDNCSMVTKQNTKSKSDTCHAEIVADYPKALDDSEAIFPNSLGAIECSPSHKVFADIQSEQTSQLNQSMSGLEKVSETPPCQINSKTSDRCELPRGKLPKSVSYTNACGIFSTASGKSVQVSDAAIQKAREVFSKLEDSAKQLFPEVSLKDNEEHSEKFTNEENTVIYTSQNLLSSAFSGFRTASGKQVPVSESALCKVKGMLEEFNLIRTESCLQHSSTSRQDVSKMPPPSCIGKRTPEHSRNSKLDKACNKEFRLSSNCNNQSGSSENHHSIKVSPCPSQLKRDKPQLLVGSKGSLVENIHPLGKEQALPKNIKTEIGKAETFPNLPVKTNIEFCSTYSKDPENYFETETVEIAKAFMEDGELTDSELLSHAKHFVFTCQNTKEMVLLNSRIGKRRGDALVSVGEPPIKRNLLNEFDRIIKNQETSLKASKSTPDGILKDRSLFMHHISLEPISCGPFRTTEERQEIQNPNFTAPGQEFLPKSHFYEHLASEKSSSNLSVSRQPFCMVPATGNEKRRHLIAPGKPVKVFVPPFKTKSHFHRDEQCISKNTKLEKNKQNSKDIDELGSGDSEKNINDSGIHQLKKNNSNQAATIIFTKNEKEPLDLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTLPRISLREAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHAQDYFGKEGLWSGEGIQLADGGWLIPSNDGKIGKEEFYRALCDTPGVDPNCISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDVEIDKSRRSAIKKIMERDDTAAKTLVLCISEIISSSADISETSSSKTSSVGTKKVGIIELTDGWYAIKAQLDPPLLALVKNGRLTVGQKITIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEIQQKKLEVLFNKIQAEFEKNDENITKQCIPSCALTRQQICALQDGAELYEAVTNAPDPSDLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFKKAMESAEQGEQILPRDVTTVWKLRIISYRKKEKDSVTLSIWRPSPDLYSLLIEGKRYRIYHLAASQSKSKSGKANTQLTATKKTQYQQLPASDEILSQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKIGLAPVVYLSDECHNLLAIKFWTDFNEDIIKPYTLIAASNLQWRPEAKSGIPTLFAGDFSRFSASPKEEHFQETFHKMKNTVENIGMFYNDAENKLVHILNANDPKLSTPTKDYASEPHTAQIVLGIGNKFLMSSPNNEMNYQSPLSLCKPKEKSVPIPGSTQMTSKSYCKEEKEMDDPKTCKKRRALDFLSRVPLPPSVSPICTFVSPAAQKAFQPPRSCGTKYETLMKKELNSPQMTPRKFNDLSLLESDSIADEELAMINTQALLLGSPGEHQLVSVSDSTRTAPTSSKDYLGLKRHSTAPGVRGPESPQACTRKREPRVQNTSDLKRTSLRLQRQQTQK</mol_seq> | |
1353 </sequence> | |
1354 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">canis_familiaris</property> | |
1355 </clade> | |
1356 </clade> | |
1357 </clade> | |
1358 </clade> | |
1359 <clade branch_length="0.018124"> | |
1360 <confidence type="bootstrap">99</confidence> | |
1361 <taxonomy> | |
1362 <scientific_name>Chiroptera</scientific_name> | |
1363 <id>9397</id> | |
1364 <common_name>Bats</common_name> | |
1365 </taxonomy> | |
1366 <clade branch_length="0.10691"> | |
1367 <name>ENSPVAG00000000246</name> | |
1368 <taxonomy> | |
1369 <id>132908</id> | |
1370 <scientific_name>Pteropus vampyrus</scientific_name> | |
1371 <common_name>Megabat</common_name> | |
1372 </taxonomy> | |
1373 <sequence> | |
1374 <accession source="Ensembl">ENSPVAP00000000225</accession> | |
1375 <name>BRCA2-201</name> | |
1376 <location>GeneScaffold_1816:16170-64885</location> | |
1377 <mol_seq is_aligned="0">LGPISLNWFEELSSEAPLYNSETAEDSEYKISSCEPNLFKTPQRKPYQQLASTPVIFKEQDLTLPLYQSPLKGLDKDRLNLGKDVTNSKHESCCTMKTKTDQANDITSPPLNSGLGESPGVPRCTHVTPQREKSAVCGSLFHTPKLMKGQTPKHISESLGAEVDPDMSWSSSLATPPTLSATVLIVRDEEASAAVFPNDTTTILKSYFSNHDESLKKNDVFIPSGPDNENKNQREARSHGWGNSFDKVSSCKDHFRKSVPNVLEDDVHENVADVSEEDSFSLCVSKYKTRNVQKLKTSKTRKNIFSETKTNECEEAKKQVRENKHSFVSEMGPNDSDPLDSSITDQKPFGNGSEAVSEAVLPSSATGWSPLTLSGLNGTQMDKTPLLHISSCDQNNSEKDLVGTGKECTNFVTLENSLPCISSVPKTETLLSEETVVNKRADRQCLESPTRAVKHALAETSLMASPLRGVEKSVLGIRELPEETSSTVFSNNMTDPDFKGELEASEGRSEIHTVCSQKDSSLCSSYVDGSWPATIIHTPVALKNTGLISTLRKKTRKFIYAVNDETSHQGLKMQKCQESGLNNHSAQFEADTFEVPSTVTNASSGLLHSSVKKNCLQNDSEELTLSSTSSLGTIPRKCSNSESNSCNNKIISQDLEYKEAKIYKEKLQSFITTGTDCLSRVQEKHCEDGPKSLRVSDIKETFLPTVCHPAVPQSEVQCSGIHFQSQESFLRDHDDTSILTPSSRDPPSNPAVISKEKESYEVSEKLQYKNCEAGFDLTKNILVEKNQEICVLNENSKKAELLSPEKTTTIASPSVTVQFNQNTNLTLIQKEQEETTSVSKITANSNSKKLFQDSENDFVFEITTEKNMPVLENFKELHEADLGCVRGPVLKSALVVDHKQASKGSVIKGFDSSNKIHDLTEKDRNNVTQQLKMTLSEDSKSDISLDIDEKSSRNDDCMDKWARLSDPISNHNFGNGFRTASNKEIRLSEHNIKKSKVLFKDIEENFCTDLAYVEVVNISSLENQKKLSKPHALNSQSTDIGSGCVQSRAFVSNSEYSHTTPPTLSLKRDFTSDHNLTPSQKAEITELSAILEESGSQFEFTQFRKPSHMIQNNPFEMPESLMPVLNAACEEWKDVDLHLTINAPSIGQAESSREFESKQKFACSLKTNCNKSTSGYLTDKNEAMFRGFYSAHGTKLNVSSEALQKAKKLFSDIENISRETDAEIDPRNLFSNKCDHSVVWMFDLENYNDKSPNEKNNKCQLIQQNNTETTTGVFVEENTVGHKKNTENEDNRCADASRNICNLGESDSSDSSKDGTVYVHEDENGWPRVDQHKVHVKPPSQYTREGNTQVKDSVSDLTCLEAVKAEETRHVNMSAKEQLTANTTGQNIKYLDVLDISFQTASGKKISVSKDSLNKVVNFFDQKCAEELNNFSDALNSELLSGINVNNMDISSHEETDMVKEKTLKESDPVCVNNELPALLPGPKCEIEKIKEPTMLDFHTANGKRVKIAKESLDKVENLFDEKRYNSEATHFSHQGTKMLKDIEECKEGLKVAHETVEITAAPKCKEMQNSLEEKKFVSNKTTMLPGLLSDNLYRQNENLKTSTSTSLKIKVHETIEKETAKSSTTHYVNPSVCSATENSVLAFYTGHGRKISVRQTSLLEARKWLREGEWDDHPEKTNAAYCVENLSCGNHSNSVITKNDKNASDKQDSAYLSNSSMSNSSSYHSDFCHSDEIYNKSESLSKHKMGNSGIEPVVTNVADGKTTGFSEVKSTVIEAHTYPQTVNEDICVQKFVTNSSPRKNKDAATGEAGSNSNDFQIGSPAFSTAGGQVVLASRGMKARERFTDACTKVIKQDSECESGPGQTQTEAGDDSEDIIFPNSPDTVPSYKVFADIQSKRSLQHSQRMLGSEEVPEMSPRWLDSKTSGVCKLNTGPPAKSVSSMQACGVFSTAGGKLVQVSGAALQKARQIFSRLEDSAEQLGARIAFEHDEDHSENATRKDDTVIRTPQMSSLTFSGFSTASGKQVSVSESAFIKVKGMLADFDFNRAECALQRPPSPRQDGSQMPPRSWIDKGAREHSTDSEMEKAYSEEFKLPNNSPTETGPSERIHSTGVSTNPSQLQEDEQRLILRGKASLVEVGHLLGKEQVLPKNMKVEIGKTETCPILPMKNIEISSYSKDPENYFETEAVEIARAFMEDGELTDSELRSRPARALACQNSGETSSLNSRTGKRRGEALFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTINDRRLFMHHVSLEPITCAPFCTSKERRETHTPHFTAPGQEFLSKSHFYEHLTVEKSSSNVSVSRQAFCKVPATRNEKRHSITTGKQMKVFVPPFKTKSHVHEDEQCVSSCTTLEECKQKQKHIGKHNSGVSENNIDDSEICQPNKDNASQAATIMSTKCEEPPLDLIPSLQNARDMQDMRIKKKHGQRVCPQPGSLSLARASGMPRVPLRAAVGGCPPSACPPEQLYMYGVSKHCVKINSKNAESFQFHVQDYFGKESLRAGKGIQLADGGWLVPSDDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFASRCLNPETVLLQLKHRYDIEIDRSRRSAIKKIMERDDTAAKTLVLCVSEVILSSTHLSETHSGKTSGAEASKAAVVELTDGWYAIRAQLDPPLSALLQTGRLGVGQKVVTHGAELLGPPEACSPLEASETLMLKISANSTRPACWDAKLGFCTDPRPFPVPLSSLFSDGGNTACVDVVIQRAYPVQWVEKTSSGLYIFRNEREEEKEAAKYAETQQRKLEALFTKIQAEFEEQEENISRQCLPSRALTRQQVRALQDGAELYEAVRAAPDPAYLESYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAVESAEQGDQVSSRDVTTMWKLRIISYEKKGKDSILSIWRPSSDLYSLLREGQRYRIYHLATSKPKNKSGRANLQLTATKRTQYQQLPASDGILVQVYQPRRPLPFPQLSNPDFQPPCAEVDLIGFVISVVRKIGLAPLVYLSDECHNLLAVKFWIDLNEEIIKPHVLIAASNLQWRPDSKSGIPTLFAGDFSMFSASPKEGHFQETFHKMRNAIENVDIFCNEAENKLMQILHANNHQWSTPTKRCTSESHAAQTALGLGSRLLMSSPTNEMNSQSPSALCKAKGKSVPTPPSAQKASKSCCKGEKEVDDPKTCKKRRALDLLGRLPLPPPVSPICTFVSPAAQKAFQPPRSCGPKYETPMKKKELNSPQTTPLKKFNDNSLLESDSIADEELALINTQALLSGSAGENRLAPPGDPTGAANCSKGDLGPPGSPPPCVGRERPHSRASAQELGPHMQDASMITNLPR</mol_seq> | |
1378 </sequence> | |
1379 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pteropus_vampyrus</property> | |
1380 </clade> | |
1381 <clade branch_length="0.064261"> | |
1382 <name>ENSMLUG00000013741</name> | |
1383 <taxonomy> | |
1384 <id>59463</id> | |
1385 <scientific_name>Myotis lucifugus</scientific_name> | |
1386 <common_name>Microbat</common_name> | |
1387 </taxonomy> | |
1388 <sequence> | |
1389 <accession source="Ensembl">ENSMLUP00000012516</accession> | |
1390 <name>BRCA2-201</name> | |
1391 <location>GL429786:4166192-4250116</location> | |
1392 <mol_seq is_aligned="0">MPIGCKERPTFFEIFETRCSQADLGPISINWFEELSSEAPPYNSETAEESEYKSSSYEPNPFKTPQRKPYHQLASTPVIFKEHGLTLPLYQSPLKELDMDRLDLGKHVTNSKYKSCCTMKAKMDQANDVIIPPLNSCLSESPGILRCTHVTPQREKSVLCGSLFHTPKLMKGQTRKHISESLGAEVDPDMSWSSSLATPPTLSATVLIVRDEEESSAVFPNDTTDILKSYFSDHDEGLKENDRFIPSGPNNEIKSQREAKSYGLGNPLGKVSGCKDHFGKSVPNVPEDEVHEKVGDISEEDSFSLCVSKYKKRNLQKIKNGKTRKNIFSETKNDECEETTKKQIKDNKQSFISKMEPNDSDPLDSKLRIQKHLGNGSGRISEEAVQSPVFEWSQLTLSGINGTQIGKILQNSSCDQNNSEKDLIGTEKECTNFITLENSLPRISSVPKTEKILSETSLIASPLQGIKKSRVRIRESPEETPSAVFSNNMTDLNFKEDPEASEGRLEISTIFSQKESSLCTSSINNGSHPVTIKHTSVALKNTGLISTLRKKTKKFIYTINDETSYQGLKMQKDQESGLTNYSAQFEENTFEAPSTVLNADSECIHSASVGKNCLQNDSEEPTLSLTSSFGRILRKCSNNESSSSNNEIISQDLDYKEAKINKEKLQSFITTETDHLSCLQEKYCEEDPEHQILDIKEKVLPVIFHPAMPHSEMKCSGIHFQSQESILYDLDNTSILTSGSKDPPSNPVVISRGKESYEASEKVKFKNCEPGFNLTKNIPMDNQEICVLNENSEKVELLSPEKYTILASPSLKVQLNQTTNLTVTQNVQEKTTSISKITVNSNSEELFQDNKKDFAFEIIDEWNIPLLENNEELQEADISCVREPILKHSIMVVDTGTDDKQVAKASITKDFDSSNVVHDLTENRKRVMQKMILGEDSKADMSLDIDKKSNQNNDYMDTWSELSDPISNHNFGHGFRTASNKDIKLSEYNIKKSKEFFKDIEEHFTTTLACIEIVNPSLLENQKKLSKPHPLDGQSTDTASGCEHSSALASDSENSHTTPPTSSLKRDFNSNHNLTPSQTAEITELSTILEESGSQFEFTQFRKPSHMMQNNPLEIPENQISALHTTSEEWEGVDPLMDSSRKLEDKQKSACSLQTSCNKNAAGYSTDKNEVEFRGFYSARGTKLNVSSEALQRAVKLFSDIENISEETSAEVDPRSFSSSKCNDTIVSVFQMENCNHKNFNEKNNKYQLVQQNNIEMAAGIFVEENSEDQKKNTASEDKSIGARRNICNLGESDSHDLNKNDTVCVHKDENGLPCVIDQHSIHLKSSGQFMNGGNTQVKEGVSDLTCLEVVKAEEICHVHTSNKQQLTASKMEQNIKDYDIFDISFKTASGKNVRVSKDSLNKAMNFFYQKCAEEELNNFSDALNSELLSGINVNKIDISSYEATDMVKDKTLKESDSVGIENQLLTLQTEPECEIEKIKEPTMLGFHTASGKKVKIVKEYLDKVKNLFDEKKQDSETTNYSHQRVKMLKDREECKVGFPLACETVEITTAPKCEEMQNSLMEKKLVSNEFAMLPGLLSDNLYRQTGNFKMSNSVALKIGNVEKETAKSPTTCYRNQFTCSASKNSAVAFCTGHGRKFSVNQASLLEGELDDQPEEINAAKVTCLKDNPEDYVENPSCGNHSNSIIIENDKNHLSEKQDSTYLSNSSMSNSNSDHSDFCHSNEIHDKLESLSKKGDNFGIEPIVKNVKEKKHTNFSEVIATIREANTYPQTKNEDTCVQKFVTNSSPYKNKKTDMEVAVSNSNNFEIQSPAFSTASGQMVSVSHGMKVRERFADNCTKVIRINTENKSGTGHTKTLTGYHEVVGDSEDFIFPNSLDSEEHSMHSYKVFTGIQSEQILQHSQRMSRSETVSEMLPCQSNLKASATCKFNTVSNACGIFSTASGKCVQVSDAALQKTRCIFSKLEESAEQLFSKVSFESNEEHSDRLTREENTMIHIPPNLPSPAFSGFSTASGKQVPVSESSLNKVKGMLEDFDSLRTEYGLQNSPTSGQVVSKLPLSCIDKRTPKYSASCKMEKACNKEFKLSNNCNIRSGFSENTPSLETLPCLSQFKQDEQPLVLGNKVSLVGSSHILGQEQALPKNIKIDMKPETYPNLPMTTNTEICSTYSKDPENYFETEAVEIAKAFMEDGDLTDSELLSHPEHFLTCQNKEMALLNSRTGKRRGDALFLIGEPPIKRNLLNEFNGIIENQEKSLKASKSTPDGTIKDRRLFMHHISLEPITCGPLCTTKERQKIQTPNFTEPGQEFLSKSHFYEQPTLEKSSSNLSISGQPFYKVPATQNKKRRYSITTGKPVKVFVPPFKTKSHFHRDNQCLGSNTDLEENKQKKENIGEHGSGHSKNNINNSEIHQPNKDNSNQVATIISTKCEEEPLDCIANLQNARDVQDMRIKKKHGQQIFPQPGSLYLAKTSTVPRISLKVAVEGQVPSACSHKQLYMYGVSKHCLTINSKNAESFQFHTQDYFGKEASWAGKGTQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRGWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEILSPTTSLTETSNSKTSGVDTSKTAIVELTDGWYAVKAQLDPPLSALVQKGRLAVGQKIITHGAELVGSPDACAPLEAPESLMLKISANSTRPACWYAKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVIQRAYPMQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQRKLEALFTKIQAEFEEHEENITKQCTPSHALTRQQVCALQDGAELYEAVRTVPDPSYLEGYISDEQLRALNNHRQMLNDKKQAQIQLEFRKAVESAEKGEQMLSRDVTTVWKLRIISYEKKEKDSVILSIWRPSSDLYSLLTEGKRYRIYHLATSKSKTKSGRANIQLTATKNTQFQQIPASDEILFKVYQPRDPLPFGQLLNPGFQPHCSEVDLVGLVVSVVKKIGLAPLVYLSDECHNLLAIKFWIDLNEDLIKPHMLIAASNLQWRPESKSEIPTLYAGDFSMFSANPKESHFQETFHKMKNTIENIDRFCNDAENKLMHMLNAKDPKCSTPTKDYTSEPHTVQTVHGRGNTFLMSSPKSEMNYQSSLSLCKPKGKSVPTPVSAQMTSKSCKGEKEVDDQKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKELSSPQITPLKKFNDISVLESDSIADEELALINTQTLLSCSAGKKQLVSMGESTGTAPTCSRYDLERKRHHFTPMVTEQNSHISTGETGDSIQDTSTIQDTSKGLQRQQNRK</mol_seq> | |
1393 </sequence> | |
1394 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">myotis_lucifugus</property> | |
1122 </clade> | 1395 </clade> |
1123 </clade> | 1396 </clade> |
1124 </clade> | 1397 </clade> |
1125 </clade> | 1398 </clade> |
1126 </clade> | 1399 </clade> |
1127 </clade> | 1400 <clade branch_length="0.028702"> |
1128 <clade branch_length="0.047366"> | 1401 <confidence type="bootstrap">100</confidence> |
1129 <confidence type="bootstrap">65</confidence> | |
1130 <taxonomy> | |
1131 <id>311790</id> | |
1132 <scientific_name>Afrotheria</scientific_name> | |
1133 </taxonomy> | |
1134 <clade branch_length="0.017597"> | |
1135 <confidence type="bootstrap">65</confidence> | |
1136 <taxonomy> | 1402 <taxonomy> |
1137 <id>311790</id> | 1403 <scientific_name>Xenarthra</scientific_name> |
1138 <scientific_name>Afrotheria</scientific_name> | 1404 <id>9348</id> |
1405 <common_name>Xenarthran mammals</common_name> | |
1139 </taxonomy> | 1406 </taxonomy> |
1140 <clade branch_length="0.07083"> | 1407 <clade branch_length="0.057221"> |
1141 <name>ENSLAFG00000002670</name> | 1408 <name>ENSCHOG00000008817</name> |
1142 <taxonomy> | 1409 <taxonomy> |
1143 <id>9785</id> | 1410 <id>9358</id> |
1144 <scientific_name>Loxodonta africana</scientific_name> | 1411 <scientific_name>Choloepus hoffmanni</scientific_name> |
1412 <common_name>Sloth</common_name> | |
1145 </taxonomy> | 1413 </taxonomy> |
1146 <sequence> | 1414 <sequence> |
1147 <accession source="Ensembl">ENSLAFP00000002234</accession> | 1415 <accession source="Ensembl">ENSCHOP00000007822</accession> |
1148 <name>BRCA2-202</name> | 1416 <name>BRCA2-201</name> |
1149 <location>scaffold_11:4649923-4713848</location> | 1417 <location>GeneScaffold_3963:155-56284</location> |
1150 <mol_seq is_aligned="0">MPVGFKERPTFFEIFKAQCSKADLGPVSLNWFEELSSEAPPYKSERAEEAEYKISSYGSNPFKTPQRKPYYNQLASTPIIFKDQGITPALYQSPLNISGKDIASSKQSRFSVRAEMSQAKDVTSPPLNPCLSESPVLRCMHVTPQREKSVLCGSLFHTPKLMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEAPETVFPDDSAISKNHFSNHNKSLKKNDQFIPSVPDSENENQGEVISRELGNFLGEVNSCEDHPEGGAPSALEEEGHETVAHISEEDSFSLCVSKYKTGNLQKVKTDKTRKKYFNKTKAGECEEAKKLEESRHLFAFEMEPNDSDPLGSSAPGEEPTGNIGHTVSKELVASSASEWPQLTLSGLNGTQMERIPLLPTSCDQNNSEKDLIGTEEECANFTTSENSLSRISRLPKTEKLLNEERVVNKSEEEQSPLSHKDSILAVKQTASGTSPVASLSQGITKSIFKIRESPDVAFGVVFSDNMTDSNLKEKPEAPESGLEIGANCSQRWGSLCPSLVGNGSCPVTTKHASVTLKNAGLISTLKKKTKKFIYSVNDKTSYPGEKMQKDQESEPTHCSAQFEAPLTFLNSGSGLLHSSVKKNSSQNDTEGPTLSLTSSFKTILRKSSNNESSCNNKVISQDLDYKATEVNTEEPLSPVTTGPDCPSCLQESHGDGDPTGQRASDVKRKVLAAAHRPAVRHSEVELSGVHFQLQKSFLYDHHNASSLGLTPRSKDPLSNSVVISRDKESYKMSEELKHKNREATFELTKNIPLEKNQEMFVLNENSKKAELSPPEKYMKVASHFVKVQFNQNIDVTVISKEQEETALISKITIDPNSKELFPENEDNCVFQMTNKRNTAILEDIKGLPKASFGCVKEPVLKSPTMVVYSDIGDERAAQLLLTEGDDSSDVVRDLTEENRNREKQHLKMTLSQHVKSDVSLEVDRKSSRNNSYVGRRAGLLDPVSNYSFGGGFRTASDKEIKLSEHNIKKSKALFKDIEDQYPESLACVEIVNPLSLDDQKKLNRPHALDWQTLKTASGDEWNSVFVSDNRSGRTAPQILSLKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSRILENNTCERSENQITVLNNSSEGWKDVARGVTTNAPPTSQVDNSKKWDGAVGDKQKVAGLLKSNSDESASGCLTHKNKEKFTGFCSALGTKISVSGEALQSALKLFRDIEDVREDASAEVDRGGSSRSQCASVVSVSELKNFNSDENLSEKHSKCHVILQNNIDITTGMFVEWNTDSCKRNTDEEDKCTGTSRNACNLGESNGNESSRNDTVCIYEDENALPCMTDQHDVYLEVPRQFIKEGNNEIKEGVSDLTCLEVVKAEETFHVDSSDKQSASNKMGQNVKNFDICDLPIQAANRKNIRVSKESLNKVVSLFDKKYAEEELSNFSDSLSSELLSDLNNKMDSSSNEERNTVKNKIWEGSNPVGTENKLLTVHRQPKCEIEKTREPTMLGFHTASGKKVKIAKQSLDKVKNLFDENEQDNSSEVFSFPHQGAKTVKEIEECKEGLELACETVETTTFSKSEDMVNSLGDNKRGVFSDETMELVNDHLCSHTENLKTSSSVSSEVEVHENVEKETAKSPTTCFRNRSTCSASENTALAFYTGRGRQISVSQTSLSEAKKWVREGELEDQPGKINAAKVACLKEHPQGCVGNPSYGNSSDSIITENDKNHLSEKQDLSYLSNNCLHNSDLCHSDEVHNESGYLSKNKMDNGGIERVVKNVKDRKSTSVSEVTSTVRKANTNPQTGNEDICAQKLVTGTSPCKNENVATEFVISDLNNFEVGPPVFSTASGETIKRVSEIFADSSSKVVQQNTESKSDADKTKPVADCSAELDGPEGDAFPNPLGGEECSMHSREALDDIHSAQILPHNQSMSELDKVCEIRPCQVNLKTSDVCKLNTGMLPKSLSSTNACGIFSTASGKSVQVSDASLQKTRQVFSEIEESTKYLFSKLSFKSNEDSNKFTKEKNTVIHTKNKLLPPQEGFSSSVNALHKAKEMLEEFDRITTECSHHLPTSRQDVSKTPPPIGKRIPKHPVNAKMEKTYYKEFRFSNNSNVENGSSETDHPIKASPHLCQSKQEVSLVENVHLLAKEQTLPRNIKMEISKIKTFSNLPVKTNMEVCSTYSKDPENRFETEAVEIARAFMEDGELTDSEPPSHAKHPQLTCPKSEEPAVRIGKRRNALVSAAREPPIKRSLLNEFDRIVENQEKSLQASKSTPDGTIKDRRLFMHRISLTPISCAPICSNKKKRGRMSASLGKEVRSLVEVGGPDAAPTLHRLSSITHVTSFPPRDLKSEHSVTTGTPTKVFVPPFKTKSRAQRNEQCAAGNVNLEENKQTQKSAVKLGSGDSENNINEGGIHPFSKNLITNLQNARDRQDTRIKMKQRQRVCPQPGSLYLAKTSTVPRLSLKMAVGGRAPSTCSPKQLYMYGVPEHCIKINSKTAESFRFHAQDYFGKEALWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWILWKLAAMEFSFPKEFANRCLTPERVLLQLKYRYDVEVDRSRRSAIKKITERDDTAAKTLVLCVSAIISSNTNVHETSSSTTSSVGSRSVAILELTDGWYAIRAQLDAPLSVLLKKGRLAVGQKIITHGAELVGSPDACTPLEAPESLLLKISANSTRPACWYAKLGFFPDPRPFSLPLSSLFSDGGHVGCVDVIIQRAYPIQWVEKTPSGLYIFRDERAEEKEAAKYAETQQKKLEALLAKIQAEFEEQEETAAKQCIPSRALTRQQIRALQDGAELYEAVKNAPDPGHLEGYFSEEQLRALSNHRRVLNDKKQAQIQSEFRRAVGSAEPGGPGLSRDVAAVWKLRVVTYEKKGKDSVILSVWCPSSDLCSLLTEGRRYRIYHLATSKSKSKSERANIQLTATKKTQYQQLPASDEILLQVYQPREPLHFSKLLDPDFHPPCSEVDLIGFVVSVVKKPGFAPLVYLSDECHNLLAVKFWTDINEDIVKPPTLIAASNLQWRPESASGIPTLFAGDVSTFSASPKEGHFQEAFSRAKNAIENTDVFCNDAEDKLQHILTAHDPKWCTPNKDCTSEPHSAPAGLGADSKFLLSFPNHEINYQSSLSLHSKGKSLSIPVSAQKTSKSCCKGEKDSDDQKTVRKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKHETPIKKAGWTSPQMAPLRRASETSVLESDSIPDEELALINTQALLSGSAG</mol_seq> | 1418 <mol_seq is_aligned="0">MPVRAKKRPTFFEVFKMRCSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFREQGLTLPRHQSPLNESDNYRLDLGNDIAHSKHRSHCTVRAKMDQASDVTSPPLNSCLSESPVLRRTNVTPQREKSXXXXXXXXXXXXXXGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEAPETISFNDTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKTLENSFDEVNSCEDHFGKSVPNVLEDDIRETVVDISEEDSFSFCVTKYKTENIKEIKTGKTRKKKLSKTVTDKEAKKEMHENKHSFASEMEPNNSDPLDSHVTTQKPIGNGSDRISKEVVPPSASKQSQQTPSGPNRTQIDKIPLICISACDQNNPKKDQIGTKRMANFISSENSLPHILSLPKPEKILNEEIMINKRDGVQYLESHEECVLPVQPAISGSSPVASPFQGIKKSIFRIRESPVETFSTVFSGNMNDSNCKGELEASESGLELYAVFSQKESSLCPSSVDNESRPTPTKQTSVTSKNAGLISTLKKKTKKFIYAVNDKTSCEREKVQKDQESELTNCSTHHEADAFEAPPTSTQAGPGILHSSVKRNCLQYDHEKQTWSLTSSFGMTLRKCSNNESIFSNNKITAQDLDYKEGKNNKEELQSFIATEADHRSCLQGRHCEDDPKSQRISDIKEKGLATACHPIIQPSGEECSDIHIQSQKSLLYDHKNACTFLLTLSSKDPPSNPVMISREKESYKMSGELEYKNCEANFELTKNIPTEKKQEIHVLNENSEEAELLLPKKLVKVTSPSMKIQFNQNTDLTVIQKDQSNFKKTSLISKIMISANSEELFPENENDFACQITNKRNMTILENTKELNETDFRCVKEPVLKNSTTVVYTDRGDEQAAQAFITNSLDSLNVVPHLTEKDGNSVKQHLNMALGQGLKSYISLDIEVKSNRNHDYLNRWAGLLNPISSDNFGCGFRTASNKEIKLSEHNIQKSKMLFRDIEEQSANSLACIEIVNTLSLDNQKKLNKPCALDSQAANNVSVDVQSIAFVSDSENIKTTPQNLSLKQGFNSNYNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHIMQNNKFEVSEKQMTVLNNTFEKWEDADPDLTINAPPITQIDSSKELERTVRNKQKSAYLLKNNCNKSASGCLTDKNEEFKGFYSALGTKISISSESLQHALKLFSDIESISEKTSAEIDPRSFSSRKCHDSISVLKTENCNNDKHFNEKDDKSQLILQNDIEMTPGVFVEENTENYKRNSENEENKCTGTDRNPCHLGESDGNDSGENDTAYIRKDENGLPYIDQHNIYLKISSQCMKEGNTEIKEGLSDLTCLEVVKAEETFNVNTSNKEQLTANKMGQNGKDFDILYLPFQTASGKNIRVSKESLNKVLNFFDENCTEELENFSASFNSELLPGIKNEMDISNLEESNLVKNNIQKGSIPVGTENQLPVLQQQPECELEKIKEPTMLGFHTASGKQVNITKESLDKVRNLFDGKMQDNVTEITDCSHLGTETLKERKECKEGLELACETFEVTTLPKQEEMQNSLDDNEKNLIYTETTMLPRLLNDNLCRQTKILKTSNSISLKVKVHKNRGKETAESPTACSTNQSTCSAIENSALAFYTGHGRKISVNQSSLYEAKKWLRKGELEDQTGKISAVDCVENPSYENSLNSIITGDDKNHLFEKADSVYLSNSGMSNSCSHHSYFCHSDEVYNKSGFLSKNKIDNSNIDPVVENVKDRKNTSFSEVPSTLREANAYPQTGNEDTCIQKPVSAFSPQKSKNATLKLAISDSDNFVVGPPAFSTASGKIVCVSHETIKKVRERFIENHGNVIKQNTESKSDPCQTKIVAGCYQALEDSEDVIFPSSLEGKEGAMHSHKDFADIQSEQILKYNQNMSGLEQVSKISSGQANLKTPDTCNFNIGKLPKSPTSTNACGIFSTASGKFVQVSDASLQKASQVFSEIEDSAKQFFSKVSFKINEEHSDKFTEESTMTHQQQLLPQKDFLYNVVKSSAYSGFNTASGKQVLISESSLNKVKGPEVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKQALPKNKKEIGKPETFSNLPMKTNREVCSTYSKDPENCFETEAVEIAKAFMEDGELTDFELLSHAKHSLFTCQRNETVLLNPRIGRRRGNTLVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKEGQEIQNPFTPPNQEFVSKSHVFKHLTLEKSSSNLSVSEKPFYKVFATGNEKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFITKLQNARDTQDMRIQKKQRQRICPQPGSLYLAKTSSLPRISLKAAVGGKVPSTCSHKQLYMYGVSKHCIKINSKNAESFQFRAQDYYGKECLWAEQGIQLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISRSWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIISLSTNISETSSSKASSVDTQKVANVELTDGWYAVRAQLDPPLMALIKNGRLAVGQKIIVHGAELVGPPDACSPLEAPESLMLKISTNSTRPACWYAKLGFFPDPRPFPLRLSSLFSDGGNAGCVDVIIQRAYPTQWMEKTSCGLYIFRDERAEEKEAAKYAEAQQKKLEALFAKIQVEFEEQEENATKPCVPSRALTRQQVHALQDGAELYEAVRHAADPEHLESCFSEEQLRALNNHRQLLNDKKQAQMQLELRKAIESAEQGVQGLSRDVTTVWKLRIISYERKQKDSVILSIWRPSSDLYSLLTEGRRYRIYHLATSKSKSKSGRVNIQLTATKKTQYQQLPASDEILFQVYQPRKPLHFTKLLDPDFQPPCSEVDLIGFVVSVVKKIGHAPLVYLSDECHNLLAIKFWIDINEDIVKPSMLIAVSNLQWHPESKSAFPTLVAGDFSVFSANPREGHFQETFNKMKNTVENIDMFCCDAANKLMHILNANGPKWSTPAKDYTSEPYAAPAVLGTGKKFLMSPPINETNHQSPLSLCKTKGKSVPTPLSAQMTSKSCKGEKEIDDSKNCKKRRAFDFLSRLPPPPPVSPICTFVSPAAQKAFQPPRSSGTNCETPTREKDLKSPQMTPSQKFSEISLLENDSIADEELALINTQTLLSGSAGENQLISISESTRTAPPSSKDCLGRKRRCVASVTAEQSSQIGTEEGQAALQTTSTRKRSE</mol_seq> |
1151 </sequence> | 1419 </sequence> |
1152 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">loxodonta_africana</property> | 1420 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">choloepus_hoffmanni</property> |
1153 </clade> | 1421 </clade> |
1154 <clade branch_length="0.210145"> | 1422 <clade branch_length="0.060923"> |
1155 <name>ENSPCAG00000000379</name> | 1423 <name>ENSDNOG00000038771</name> |
1156 <taxonomy> | 1424 <taxonomy> |
1157 <id>9813</id> | 1425 <id>9361</id> |
1158 <scientific_name>Procavia capensis</scientific_name> | 1426 <scientific_name>Dasypus novemcinctus</scientific_name> |
1427 <common_name>Armadillo</common_name> | |
1159 </taxonomy> | 1428 </taxonomy> |
1160 <sequence> | 1429 <sequence> |
1161 <accession source="Ensembl">ENSPCAP00000000440</accession> | 1430 <accession source="Ensembl">ENSDNOP00000034947</accession> |
1162 <name>BRCA2-201</name> | 1431 <name>BRCA2-201</name> |
1163 <location>GeneScaffold_3650:343-54585</location> | 1432 <location>JH578084.1:11711-90821</location> |
1164 <mol_seq is_aligned="0">MPVGFKERPTFFEIFKARCSKADLGPISLNWFEELSSKAPLYQSEPAEESEYKVGSYEPNFFKTPQRKPCYNQLASTPVIFKEQGVTLPLYWSPLNLCRYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLQDTHVTPQREKSVVCGNLFHTPKLAKGRQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASETVFPYDSTPISKNYFSKHKKSQKENDWRVSSVPENENKNQGAVLSPESGEVPRGLFGDVNRCEGCGGSSVPCGPGEDTQETVADISKADSVSLCITKYKTGNTQKMKTGKTRETIPKIAKAGECEDVEKELEENRHSCAREMEASDSSLLDFHEPDEETAGSRSHTVSGGVVASSASPWSPLTPSGLSGTQMEKRPSLSMSCSHSHLEKDLIGPENDLMTSESSLPHISGVPETEKRWPEERVASKSHKGQKLAPQKTSVPAVQQVAAAASQSATEAVVGVRPLAGETCAVRSDDVTPSHFQEKPEASNSGWEIEAACSQKDGSLCPSSVGDGSCSATPKHASVALKNVSLIATLRKKTKKFIYSISDKKSSPEGNTWRNPDSGPTQHSQFEANCVFADADSGLLRFSVQKNHLQNEGEEPARPLTSSLGTILRESSSNKSSSTDKELSQGLYCKEARVNSEEVQSSGSTETHGQSCLQGHHGDKFPTTQGASDVKEEAWAVSVHPVTQHSEAEDSSVCLDSPRSSPCGRGGTASACPSPPDPRGTMSGRLMIAREREPCEMSEELSHKGCVTTFELIKNIPPEKNQEMCALNENCREGEWSLTQDYVTTASPSVKVWLGQNTDSTVVHANQEDTAFISKVTVSPNLEEFFQENEENSAPQVMNERNMAALEGMEELPEEHFRCVREPILKTTTRVMCSDRGYKQAAHVLMTEVCDSSAAICGLTEENRHGEEQRLTGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEHGIQKSKVLFRDIEDQYPRSLACAEIVGVSLLDSQQMLSRLDTLASKTPNPTSGEVWSKAFVSDSGSSHTAPQTLSLKQDFNSSRKLTPSEKAEITELSTILEESGSQFEFTQFRKRSMQNTLERSENQLTVLHDLSEDWKDVNLDLTTPGPSASQTGDSQRWVSTAATRQTAPNHVKQRASGCPEHKEKFVGFCSAGGTQVHGSSTTLQGALRLFSDTESLSEDASTGVASGRFSLSPSASVVSVSEIESSNERSLNKKHDKCQLTLPNSPDTTAGMSVKGNPERGKRSREDQCAGPHGNTRKLSETDGSDSAEKAPVCVCEGGTGLLWDEPSVGLRASSQSTMAGNGDITEGLSDLTCLEVVKPEETFHVDTSEKEEPTCNKMEQSGKDLDLCDLPVHTASRKAISISKESFSKVVNLFGTKYTEENSINLSDSVNSKLLSGISKNKKDCLRYKERNTVQNKVWKEKNLTDTENKLTVHPQAKHEMGKTGEPPMLGFHTASGKKVTVTKASLDKVRNLFDENKQGSTSEISNFYHRGTKRLQERGEHEEGLAVACEAVGTTPVPESGEVEDSLGDSDRNCVSNETLGFSRDCLCSHTENLRASNDSCVNDEVHENTERETAECPVTCDQPSDRHQALEFYTGHGGRIGGCQTSLLEAGKWLREGELGDERGKRNAADCVGNPSRGGSSGSITTENGNKNLSEKQDLSYLSNSCSYRSGFCHLDELHHKSWHLSKIKKDNSGIEPLVKDAQDRKSSSICEVTSPVGNADTHPPTIKEDTCVQKCVADTSLCRNNTATELTMSDSNSFAVGPPAFSVASGRVVSVSPETMNQVSRLFADTSSKVVTHTDCKSDTYQAKAVGGCHTALGDSEGNIFHNTLDGEGCVSPSCKALGDIHSEQVLPHTQRMSELDQVSKRPSCQVSLKTSDVCKSYTEKLPKSISTNTCGIFSTAGGKSVQVSDAALRKTRQVFSEMEDSAQQLVYTESCHSNKGHSNKVTKESKAVIHTKDKLPSPLAGFSSRAVNSSASSGFSTASGKRVLISENALQKVKGMLEEFDVIMADCSYDSPTSEDVSKILHCNDERVPKHCVSSKVQTCYRGFELSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSIKRSLLSEFDRAVENQEKPLQAAKSTPDXXXXXXXXXXXXXXXXXXXXXXXXTTEKRQEIQNPNLTAPGREFLPKSHCFERLALEKPSSSFSISRQPQCQVPAPSTGKASHLVTTGKPTKVFVPPLKTKSRFQRSERCATRNVNSEENKHTPRSVVKLGSGDSDNTVSEGRCHPLSKSSSSQAAAVTVTGAGDEPSDLIAGLQSARGLQETRIKGKQQQHVCPQPGSLYLAKTSGLPRLSLRTAVGGRAPAASSREQLYVHGVPEHCVKVNSRNAESFQFRAQDYFGKEASWAGKGVQLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWIIWKLAAMEFCFPEKFAYRCLSPERVLLQLKYRYDIEIDRSSRSALKKIMERDDAAAKTLVLCVSAIVSSSTKAHEMPSGNCSRVDSQPTAILELTDGWYAVRAQLDGPLSALVKAGRLTVGQKIITHGAELVGSQDACTPLEAPDCLMLKLSANSTRTARWHAKLGFFRDPRPFSLPLSSLFGDGGGVGCVDVVVQRAYPLQWAEKTPSGLYVFRDERGEEKAAARHEESQREKLEALLARVQAEFEEQEENAAKQCTPSRALTRQQVCALRDGAELYKAVKDAPDPGCLEDYFSDEQLRALRDHRQLLHEKKQAQVQLEFQKAVESAERGEQGLSRAVSAVWRLRLVSYKSRERGSVLLSVWRPSADVSSLLAEGRRYRICHLAASESKRTSGSTRVQLTATRRTWYQQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAPLVYLVDETHRLLVVKFWTDLNEGIIKPLALIAASNLQWRPEPNPGTEPGIPVLFAGDVAVFSGSPKEGHFQEAFNRMRSAIENTDVFCSDAENKLMHVLNTHGPSWSPPNEDWTSESCCAQAVLGAHSRFPLSLTSHEIKYWNYSLCPKGKPLSTPVSAQKTWRSCRGEEGGDDRRAIRKRRALDLLGRLPAPPPVSPACTFVSPAAQRAFQPPRSRAARHEPPGKEQEMTLLKKEASLVESESIADEELALINTALQGCAGQCPGVPVGDPAGMAPPPSPGPLGPQRAAGPAAGGQEQPQSSTG</mol_seq> | 1433 <mol_seq is_aligned="0">CPWDPKRGQLFFEIFEMRCSKTDLGPISLNWFEELSSEAPPYISEPAEESGCKISSYEPNLFKTPQRKPFYNHLASTPVIFKEQDLTLPLHQSPLKESEKYIQDIGKDIANRKQRSHRTRRTNVFQANDVTSPPLNSCLNESPGLRFTLETPQREKSVVCGSLFHTPKFMKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRDEEASETVSPKNTTAILKSYLSNQDEILHKNKPIPSVPGNKNKNQGEALSPELGKIFENSFEEESICEDHFENSVPHALEDEVREPVVDISEEDSFSLCVTKYKIENIQKIKTGKARDQKFSRTITDTLEEAKKEMSENRHSFAPEVEPNDNPLESNMTNQKPVGKSSDKISEEVLPSSGSDWSQLSSNLNRTLMERIPLIRISTCDHNNLGKDLIGTEKECAIFVTSEDSLPHILSLPKTEKISTEEIMVNKRGEEQCLESHKESSLSVEQTISGFSLIASPLQGIKKSIFRIRESPEEPFSSTVFSGNMNDSNSKKELEASANRLEIYAVCSQKESSLCPNSVDNESSPASVKQTYVTLKHTGLISTLKKKTKKFVYAINDKTSYQGEEIQKDQESELINSSAQLDGNAFEVPLTFTKADADLLHSSVKRNCLQNDHEKPTWSLTSSSRRILRNCSNSANIFSHNKIVAQDLDFKEGKISKEELQSFITTKTDHQSILQEGHCEDPKSQRVSDVKENVLAIACHPEIQHSEECSNINVNSQKSFLYDHGNACTLILTSSSKDPPSNPVVISREKESYKMSEKLNDKNCEASFELTKNIPTEEKQEIHVLNENSKEPESLLPEKFVKVASPSMKIQFNQKTNLTVIQKDGEETDLISKITINVNSGELFPENENDSASQITNERDITVLGNTKELHEANLRCVKEPILKNSATVVYADRGNGQAAQALITKDFDSLNVVPHFTEDSNNVKQHLNITLDQDFKTYISLERDMKTNRNKDDLNTWAGLLTPISNDNFGCGFRTASNKEIKLSEHNIKKSKMLFKDIEEQSPDSLAWIEIVNTLPLDNQKKQNKPRTLDSQTVNTVSGDVQSFVSKSENINTSPQNLSLKRGLNSNYNLTPSQKAEITELSTILEESGSQFEFTQFRKPNNILKNNTFELAENQMTVVSNTSEKWKDADPDLTINHPSISQVDSSKELESTVGNKQKTACSLKNNCNRSASSHLTDKNEVEFGGFYSALGTKISVSSDSLQTAVKLFHDIETISKETSGEEDLGSFSSRKCHDSVVSMFKKENSNSDKHLNERNDKCQLTFQHDIEMTPGIFVEENTGSYKRNSENEESKYADTNRSTYNLRDSDGGNSSENDTVYIHKDENGLPCISQHNLYVKISSEYIKEGNTEIKEGLSDLTCLEVVKAEETFTVNTSNEEQLTSNKMGQNGKDSDIFNLPLQTESGKNISVSKESLNNVVNFFDKNCTEELKTSSDSLNSELLSGINNKKDISSHEESNLAKKIHKGSIPVGTENQLPALQIQPECELEKIKEPTMLGFHTASGKKVNITKESLDKVRNLFDEQMQDNITEIANCGHLGTKTLMEREECKEGLELACETFEVNTLPEYEEMQNSLDDNKQNLVFTETTVLPRHLSDNLCGQTEILEASNSISLKVKAHENTEKETKSPATCYADQSICSAIENSNLAFYTGHGRKISVNQTSLFEAKKWLRKGELEDQPVRIIRLNEYHEDCVGNPSFGNSSNSIITEDDKNHFFEKADSILSSNSNMSNTCSYHFCHSDEVYNKSEYLSKNKIDNVDPVVENVKDRRSMSFSEEPSVKEVNTHPQTVNENSCIKKLFSNSSSCKNKNAAFELDLSDSHNFDVGPPAFSTASGKIVCVSHETIKNVREIFTDNHSKIIKQNTESKSDTCQTKIVAGCYETLEDSKDVIFPGSLDCKEHSIRSHENFADIKSEGILQHNQSTPGLEKIAKIPCRTNLKTSDTCQFNIGKLPKSFSSANACGIFSTASGKSVQVSDTSLQKARQIFSETEISAKQFFSKVSFRSNEHSDQFTKEENNMTLSNSLPSSQKGFSCNVVTSSAYSEFSTASGKQVLISKSALHKVKGMLEEFDLIRTEYNIQHSPTSRQEVSEILPLTCVNKRTPKHSENSKLKIAYNKGFKLLHNYNIENGSSENNFPVKASPSLCLYKQDKEQSVLGTKVSLVDTIHPLGKEETLPINGKVDIGKPETFSNLPVEANIEVCSTYSKDAENYFETEAIEIARAFMEDGELTDSERPRHAKHSLFTCQGNEGKVLLNPRSGKKRGNTLVSVGEPPIKRNLLNEFDKIIENQEKTLKASKTTPDGTVKDRRLFMHHISLKPITCGPSCTTKEWQEIQNPTFTSPDQELLSKSHPFIPLTLEKSSSKLSVSGQPFYKVPATGNAKISDSITTSKPTKVFVPPFKTKSHFERDERCASRNINLEETKQTQKNIDELGSGDGENSISDSEIHLFNKNNSNKAATILFTKCGKEPLDFITNLQNARNTQDMRIKKKQRQRICPQPGSLYLAKTSTMPKISLKAAVGGHIPSVYSHKQLYMYGVSKHCIKINSKNAESFQFHAQDYFGKEGLWAGQGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRSWVYNHYRWIIWKLAAMEFAFPMEFASRCLNPERVLLQLKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCISEIISLSTNISETSSSKAASVDPKTVANIELTDGWYALKAQLDLPLLALLKNGRLAVGQKIIMHGAELVGSPEACSPLEAPESLMLKISANSTRPACWYAKLGFFPDPRPFPLRLSSLFSDGGNVACVDVVIQRAYPTQWMEKTSCGLYIFRNERAEEKEAAKYAEAQQKKLEALFTKIQVEFEEQEENATKQCAPSHVLTRQQVRALQDGAELYEAVKNAPDPGYLEGYFSEEQLRALNNHRQILNDKKQAQMHLEFRKAIESAEQRVQGLSRDVTTVWKLRIISYETEEKNSVILSIWRPSSDLYSLLREGKRYRIYHLATSKSKSKSERVNIQLTATKKTQYQQLPTSDEILFQVYQPREPLHFTKLLDPDFQPACSEVDLIGFVVSVVKKIGLAPLVYLSDECYNLLAIKFWVDLNEDIIKPYMLIAASNLQWRPQSKSEIPTLFAGDFSIFSANPKEGHFQETFNKMKNTIENIDIFCHDAEKKLMLILNANDPKWSTPTKDYTSGPHTAQAVLGTGNVFLMSSPINEINYQSPLPLCKPKAKSVPTPVSAQMTSKSCSKEEKEISDPKNCKRRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQPPRSCGTKYETPIKKKDLNFPQMTPPKKFNELSLLEKDSIADEELALINTQILLSGSARENQLISISGSTRTPPTSSKDYLGQKRHCATSMTKEQENPQTSTEECETSLQDIHTTKNRSKRLQRQQKRK</mol_seq> |
1165 </sequence> | 1434 </sequence> |
1166 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">procavia_capensis</property> | 1435 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">dasypus_novemcinctus</property> |
1167 </clade> | 1436 </clade> |
1168 </clade> | |
1169 <clade branch_length="0.202287"> | |
1170 <name>ENSETEG00000003989</name> | |
1171 <taxonomy> | |
1172 <id>9371</id> | |
1173 <scientific_name>Echinops telfairi</scientific_name> | |
1174 </taxonomy> | |
1175 <sequence> | |
1176 <accession source="Ensembl">ENSETEP00000003277</accession> | |
1177 <name>BRCA2-201</name> | |
1178 <location>GeneScaffold_4230:2259-131183</location> | |
1179 <mol_seq is_aligned="0">LVGTKERPTFFEIFKARCSKADLGPISLNWFEELSLEAPPYRSEPAEESEYKVSSYEPNHFKTPQRKPYDPLASTPVIFKDQGIMPWLYQSPLKLYEFTIKETANSKQRSRLSKRARMDPAKDATSPPPNPCLSGSPLLRAAHVTPQRAKSAVCGNLFHTPKLLKGQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIAREQEVSELVFPNDATVASNDCFSNHNESLKKNDWLIPSGSDAENKNQREVISYEFGETLGNLFGDVHSHQDHSGRAVSNVIDEEVQERVADISEEDSFSLCVHKYKTGKLQKLKTRKTREKVLNKTKAGDREEAEPQLQGRKHLLSFGMEPSDSDPCDLAGLAQEPTGGTSEARSQELRASPALEWSQLMLSGLNGTQMTKMLFLPDPSFDQNDLGKDLIGTQKGCVTLVTTENSPPHLSSLRNTEAVLSEDPVLKESNEEKCVESNQDFILPAKPAVSGTSPITSPLQSTKKLVCKIRESPKETSGVDSSGYMTDPSFKEKPEASAGGLEADCHCSQREGLFCASSAANRSCPTSFRPASATLKGAGLISTLKQKTRKFVYSVSDETSYPEEQIQRDEDPEPPHCPAQVGVHAAPGAHSDSLHSPVKRSNLQSRPEEPTLSSCVGPILRKSSNHESSLNKIISQDLSDKEIELNTEELESFITTESDSLSCLQESYCEEDPKNDRRISDVREMVLAASHRPAIECGSVHLHSQESFLHDHNTSTLILTPSPKEPVSNPAMISRKADNIFEATFILTKNILVGKNQEISILNDNSQIAQLSPPEKYLKVTSPSLKVQFDQNTNGMAIPKDQEEITFTSEVTVCSNSEELFPENKDNFVFQTTSEKKNMAVLEDAKEHHETSVSCVKEPAPKHPTVVAYSDMDAKQAVQVLAPQDSNSSNISLNLSEEARKSKKQYLKMTLSQDLKTNLSLELARKSSRNDDVDSCVGLSCPISNCDFGGGFRTASNKEIKLSEHHIKKSKALFKDIEEQYPKSLACVEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKVACLLKNDCNKSTSGYLNHKVEFTGFCSALGTRINVSSEALQSVRSLFSAIEDTSEDTSVEGDPQSFSPGKHTSVPLSKRTYLNNDENVNMKCHIILQNNMEITTGIFIEGNTRDWKKNIENEEKCTDARRNTYSSGKSDSDSSKANTPGIHKDENGSPSNVGQHNMYLKLSGQLIKEGNNEKEDLSDLTCLEVVKTGEIVCVDTQTKHQSTNTKMRQNVKDFDMCNVPFQTASGKNIRVSKESLKKVANLFKTEESNTFSDLFDSELPSGINTDKSDSENRKMVKNNIQKGSNPIGIENKLLVLHQQPKCGIEKTREPAMLGFHTASGKKVKIAKESLDKVKCLFDAEKQDDDTSKIFSFHSQGTKTLKETREYTEGLQLETVEVTTLPKSEEKNLLHDHERNFISNETTGLLNEPFNRHTKSLKTSNSISLKVEVHQNLEKETAKSPTMCAASENPAFICTGRGRKISVSQASLFEAKKWLREGESEDQPVDISTADWVGNPPYGSSSNPVITESDKKIYLSNNSYSSDFCHSNEVRNKSGSLSKIDCSGIEPVMKNIRNRECTTSISEVTATAKKARTPPQTVNENVCVQKLRTDAPCTSENAAIGFAMSGSSNFEVGPPAFSTASGKRVSISRKAIERAREILVDNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSAAAGFSTASAMQVLISESALYKVKGMLEEFDLITAEYNPQSPPFISAASNILPLPSVENIPKNTNSKEVRKTCKTEFQLLNIERGSSESPLETKASLVEKSRPLGKEQTLLRQVKMKIDNAPTFSNIPMKKPVEVTSACSKDPEGYFETEAVEIAKAFMEDDELTDLELPSHAKHSQFTCTEPKETVVLNSRTGKRRNTLVSAGEPPTKRSLLNEFDRIAEKQEKSRQASKSTPDXXXXXXXXXXXXXXXXXXXXXXXXTTKEQPEIRTPSFTAPGQQFLPRSHVLGHSALEKPSSSVSVSGEPLHRAPVSGRDGARAAVSAGRPVKVFVPPFKTKAHFQKKEQCAAGNVDVDENEHPQKNLAVPGAGASMSGGGIHPLDQKDSSQAAAVTFSTHEGEPLDVLASLQIARDAQEARIRMKQQQRVCPQPGSLYLAKTSSVPRVSLRAAVEGRAPAACSPEQLYVCGVPTHCAQISSRNAAAFRFRAQDYFGKEAWAGKGIQLADGGWLIPSNSGHAGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHADARGRAVLELTDGWYALRAQLDPPLSALLKTGRLAVGHKIITHGAELVGAQDACPPLEAPASLLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAKRCVPSRALTRQQVHSLQDGAELYEAVRTTPDPGHLEGHLSDEQRRALSAHRQLLSNKRQAQVQLEFQRAVESVEAEVQDLSRDVTTMWKLRVTNYQKKEKDSVVLSVWRPSSELFSMLTEGTRCRIFHLTVAAAKRKAGKGTVQLTATKKTQYQPLPASEEILSQVYQPREPLDFHRLLDPNFQPPCSEVDLMGFVVSVVKTTGLAPMVYVSDEHHNLLAIKFWVDLNEDTIKPPILIAASNLQWRPESKLRIPTLFAGEFSTFSANPKESHFQEASHRMQAAVEDASAWCGEAKQKLLLLLEARGPEWSTPSKGXXXXXXXXXXXXXXXXXXXLPCAHGDCPNFLSLCSKETSLPMPVSAQKTATSCGGVEDGGSDPKTARKRRALDFLSRLPAPPPVSPVCTSVSRAAQKAFRPPRRCGTAHGARLGTRASASHQKTTPLGKAKDTLLVESDSIADEELALINTQALLCGPAGNPLVCVSQSARTTPLWPEASPGLQQPGPMPELPGNASQRGTRQEPHLQETSGTKFME</mol_seq> | |
1180 </sequence> | |
1181 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">echinops_telfairi</property> | |
1182 </clade> | 1437 </clade> |
1183 </clade> | 1438 </clade> |
1184 </clade> | 1439 </clade> |
1185 </clade> | 1440 </clade> |
1186 </clade> | 1441 </clade> |
1187 <clade branch_length="0.088637"> | |
1188 <confidence type="bootstrap">61</confidence> | |
1189 <taxonomy> | |
1190 <id>32561</id> | |
1191 <scientific_name>Sauria</scientific_name> | |
1192 </taxonomy> | |
1193 <clade branch_length="0.039526"> | |
1194 <confidence type="bootstrap">61</confidence> | |
1195 <taxonomy> | |
1196 <id>1329799</id> | |
1197 <scientific_name>Archelosauria</scientific_name> | |
1198 </taxonomy> | |
1199 <clade branch_length="0.197004"> | |
1200 <name>ENSPSIG00000011574</name> | |
1201 <taxonomy> | |
1202 <id>13735</id> | |
1203 <scientific_name>Pelodiscus sinensis</scientific_name> | |
1204 </taxonomy> | |
1205 <sequence> | |
1206 <accession source="Ensembl">ENSPSIP00000012858</accession> | |
1207 <name>BRCA2-201</name> | |
1208 <location>JH209329.1:1531099-1613422</location> | |
1209 <mol_seq is_aligned="0">MENKMADKPVARPTFFEIFKARCSESDLGPISLNWFEELSTEALPYESETSERPEYRAVCLEQSASKTPRGKPFTCSQLASTPVIFKEQSITLPLLSSPIKELGQKKTETGKDSLVNKDHRSSPHFMKTKLDQISPLNTSLSISSAALRGIYRTPQRNNIPVARGSLFCTPKLLEVKTPTCISEGLGAEVDPDMSWSSSLATPPTLSATVIIARGNDSISGAKQHDERIAMVLHSFFSSHGKRPEKNDVNVLSIPEIVNINAGLDGKDHELEKILDGSFGEMNSLENRSGRNQITQNSLEDGERNEMRIDMPDAGEHVLSVCHTSGEHLQDVTMTNWTKKTHFDKMATILLQETNEIRGNFKDASSVCERELDSPRCEIFTTNMSNNRIPKLLENRKFTKEDMPSTFTSEWSQLNLSGLDVTQLEKNSTSDKYSPSSFCNKKRSENKLHANLSTFETSLLNTSSLIKAEKLLNINWSEHMEDETKNYEKHSTSETSIMHSVDLSVQDPSLVKVCAAEKVSEVHFLDCSSFLMENTNFTGYTEVCTSCFHKELKELSKSSITDVTSHPVLCNDSIPSNPDGTKWSTNNESTPVRSCLKNTSLLSSLKKRSKRFIYTINNASPRQEEKVKKEIKAGPSIHSASSRLEFESCPFKSPDMVSNDDQDLLVSSAERKSLKSNSEESFMLLSKYATRADRIDNSPNSSLKNKMIHLDILKSNRREHQPASSLDCSETSNTLKECLVVSSNSNNVLSVEHKVIATACLRATKHSEMDFVRTEHVVQWPKKDEMEMYGNVNPHNDTVILQTFKNQLGEPSSDNEQLVEIEQEQVSMKNRYFNDTSINCDIHKHNSVCCNRTKSEDENDATGLLPTDEWKTVTLPPLIIQSNKNSSTTTLIRESKKDTVQFSKVIVADQETESIENGDNNLQTPSNNNMVTIESSEKLFDHNNCGSLQAVISDKSTLPQLALKIGPEQIVSDFVTKAPEPNVEDKDFVKKVITFPSKRVTSDKYLYSKNHLCLDIKSKENPEDKEKWSGDTNFNGQCLNKCFGGFQTASNKQIKVSEKSITKGKMLFKDMEDECLKDFSGEGIKNISNQITKKNINIVNNKLDTNYSHGLDSQASLIESKNAQSIVPESTDSSLQSLHRNQPHQLNQTLTASQEAEITELSNILEETNSQFEFTQFRKQSNMVQNNSSQLSGCVDKNETTNLKDISAMWQDTDLDYISETEAQRVNDKSSSKHTDINEESTEMGNVNEEREIFQKNNCVEFTSTNLCRNANKIPLVSSFSVSTQDNFSNFAGFSSAGGKKINISNEALIRAAKLFSNLDAAAADDDDMFKPTEINSRSHYSDRYKTSRRDVSRCVAEGDSYCGESVKDANIEYQNTLKNNEENINTFMKIYGENQGENTTNISENDRVSSSTKISNLGVIKYSVYKMENGLSSSENNNPSLNISKKLHESDTQSQYSLQEGLSDLTCLAEVSKTEEILTLNISDDPSKSEQKIKNVDFRTASSSNRSVSQAPLDKFHLFETCTEKELNNISSNSNSQMTHSINKKERNATSRKRNINVNQNKSRIGSGHQQISIQQDTDFERKNIEENNGFHTANGKKIIITDESLSKAKQFFAEENVCPENMDNIGNFEDSEFHPCNKDFIKDCEEFAENTPNYDQEMLTLTVGDQGVKFVGPGSTSALRKSEVVISQKRDPKPELISKTTFGFNTASGKRVLVSENAFQKVKQVFNNSKYHFADRLSSRQDPVIALKSSINYAGANKATDTVCLKPKIQDTHNEELDLTNSYPVEIKALQNICNIEIPVCVPRSEKDEHLTLINSFTFAEDTQLFKKEHHSLTRMEIEAVSCNTPTKTKLDVFHLKCSQSSEEYLETEAVESAKAFMEDKFTNSGIENDTKKSLFICRKIDKNCPLNIRTGKRHMEERASLGEPPIKRQLLPEFDRTENPHKSLKASKSTPDGMIKDRRKFMYHIPLKPETCVPFSATKERQEIKNPNITVLDQDFKGYKPKSDVFQHHLLRQSLSGSSGFFTPFKKISTEESEKRKNLPLLSKTAKTFVPPFKVKSAISTHQHHVSKRLDSLINTTMNRDKELKDITMQQSTSETEVQSQEKDYTKQVAPCNLRNNVDGDSDLMEMIANLHYVRNLQEMRIRKKQRQNIHPQPGNLYLMKTSAAKRISLKAAVEEKTPSTYSMEQLYMYGVSKDCIKVNSINAESFQFLILDFFSKEYLVAERGIQLADGGWLIPTDKGMAGKEEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPQEFANRCLTPERVLFQLKYRYDLEIDKSQRSAIKKIVERDDTPAKTLILCVSKIILLNANMPDVCSNKTIVENKKEAAIIEVTDGWYCIRALLDPPLQALLHGRRLTVGQKIIVHGAELVGSQDACTPLEIPDSLMLKISANSTRRARWHAKLGFHQDPRPFPLPLSSLFGEGGTVGCIDIVIQRTYPIQWVEKMPTGSYVFRNGRAEEREAAKHAENRQKHLEALFSQIQMEFEQHEDKPHKRALRSHTLTREQIRILEDGAELYEVIQNASDPSYVEGYLSEEQLKALNTHRQILNDKKQSEIQAEFKKAIESAEREERGCSKRDVSTVWKLRVIDYRKRETDKAIILSIWRPLSDICSLLKEGGRYRIYQLTASRSKGKPDAVNCTLTATKKTQYLQLQASQEVLLEIYIPRKALQFSMLLDPSFRPSCAEVDLVGFIISVSKKTGFTTLVYLSDEDHNLVAIKFWTDLKQLAIEDIINPFTLISASNLQWRSEFKSDIPTLFAGDLSIFSASPKDSYLQERLNKLKNTTENLSCFCSDAEHKLMKFLQKNSPQQYNLPKECGLDPLSPSWKSGLDTGNKPLISSPSSEIKCQSSLSTSKHDLKLVLRSSAKMTPHISYSKESPKNCKKRRKALDLLSQIPSPPPVTPINSFVSPSLKKAFQPPRSSGVQYDASLKRTNHNSDHINSFKGVNETDSLPNNDLVADEELAMINTQVLLYNFQEGKKTDCVGESTNPSDHLLLKNNCLMSLMETKTSQNSTDGAAALEKDTRETEGSLPVQKKLQRQRKRKCY</mol_seq> | |
1210 </sequence> | |
1211 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">pelodiscus_sinensis</property> | |
1212 </clade> | |
1213 <clade branch_length="0.300747"> | |
1214 <confidence type="bootstrap">100</confidence> | |
1215 <taxonomy> | |
1216 <id>8825</id> | |
1217 <scientific_name>Neognathae</scientific_name> | |
1218 </taxonomy> | |
1219 <clade branch_length="0.028469"> | |
1220 <confidence type="bootstrap">100</confidence> | |
1221 <taxonomy> | |
1222 <id>1549675</id> | |
1223 <scientific_name>Galloanserae</scientific_name> | |
1224 </taxonomy> | |
1225 <clade branch_length="0.115288"> | |
1226 <name>ENSAPLG00000007774</name> | |
1227 <taxonomy> | |
1228 <id>8839</id> | |
1229 <scientific_name>Anas platyrhynchos</scientific_name> | |
1230 </taxonomy> | |
1231 <sequence> | |
1232 <accession source="Ensembl">ENSAPLP00000007411</accession> | |
1233 <name>BRCA2-201</name> | |
1234 <location>KB742680.1:477155-513214</location> | |
1235 <mol_seq is_aligned="0">MACRSGERPTFFEIFKTRCSDSADLGPISLNWFEELSSEAPPYEPKLLELDAPIDQTSFKTPKAKPFTYSQLTSTPPIFKEQNTIMPPFSSPGIELDQKKIGTSRENFTSPSIIGRKRDQENEMLASPLGTCHNFLAASPAILRNAFRTPQRSNIPGPYGSLFCTPKFLEVRTPKRISESLGAEVDPDMSWSSSLATPPTLGATVIIARETSSISGPKQQDERAEIVLHSFSSDHDECPGKNDSSLLSIPETVKLNGEDVTKEFESEMLDGFFGEMDSFENTLTVPAESSGTLLLLPHALDAIDKCETKRDEAQGEEDVPSEQPVRRKTGISQEVEMGNGAEKSHPIEMKDYLSQNADEDTGDSKDACLIGHEKELDLLRITGNMQDNGMEKSCENEKLVKDDVLSSSSQWSQLNLSGLDVTHLEMSTCSSPSIDLCTDKDLKEKTALMAKDDAVGTSLLNTLGLKNAQQLLNASLSDMHEEMQKTGNNPTAEVTPVRSVHLNPELVKGHAAEKVSKMSFINCNSFLIKSTNVMEYSVVYNSSFSKCVKATSKSVVTDVLSHPLVCSTSSPDNCSDLHFTSSENTLTKSGFKSLNMLSRLKNKSKRFIYTINNTLLYQEEKIQKEVTSELPADLMLPQLETDSHEFQGCHVAADGDPDSLLSAERQLNIKEDNLSTCVKKDLEDNSSFDSRLKQQELRNLGKDTREYQPATSLKCLEVSNHQKEDTTDSLNSERISNIKRKVLSASCLMARKRSRLFPEDCCLEKGEEDTSMSHNVNNGATVPQSLKRQPAQAFPSNNDCLLDVCHDITSVTNRDVNKTLSQINFDINRVSSDSCSKISADEKHATDPLALVEHRQVLAPVGMNCSGDDRIRLKQCGKKDVAAFSGDVADNQETRLVKSDESPEAAACNKVAVEIVEELLDCIDDNSLIEVISEEDKQVPPIYSHKEPNENLEHEGKSSGIVNVCRSNLSFGGFQTASNKQIKFSEDSIAKGKMLFKDIENECFEASYVERGRNFSNQVQKENVFSSNLESKLGSALSGSQTRRTQFTPHKVDLCKNFPRSLHSLQELNQTLTASQEAEIAEISSILEETGSQFEFTQFRRQSNMVQSVEKQDIVTVEMHGAANVENNSEPWKDTDPCSTFKSENQVRNDKYCSTWKDTDEECKMVEYEKENKVLFHKSSEEVTFSDRDESGVSDGESFPVPVQASVSNFVGFTSAGGKKINISKAALTRSAELFKDLDDNYLLKSSETNTGCGNSKGSRGMSSNWNSFRCLTKENKGVSNINSVGAISHAHSISHHSENVGTPEKENKENWTERLISDDERVDFSHANARHSAYGMRNSPTSIQEQNQNHKIPKQVLNPGDCQAEDSLQEDSLYVTCLGDATATAEHCDLSISDEMENLFPAEKGEDSRQKDEHLPQKFQTSDGAISVSGGPLDNSLHGLSVNCGERDVDVSENSDKQKTTGINIEGEDTTDESLFVNESRIKMGSYQHHQVPFEQEVDVEPSEVKGSFLTGFQTASGKKITIADGFLAKAEQFFSEEDVDLGKEHNDNFEDHIKNRKRSVNCVKGCDLRIDNVAQCDAEKLISEEPGIRFKQTRGSSPTKQAVILDSVKVDAFANIGEDSDRNLVAAYEKADVQHGKSELESLSEWESKALSRTCLSEDGKLFAEMDVECSAKKKDKSESTHGFPVQSAISLPSMKVSSNPVDNSMPCDVKNTLFVEDSSKSDQSVLKAYSSVSQSHCPQLNSDSKEFDVQHLNQPCSNTSCFADAALTAHQKQSEVGLPEGGTNLACLQETSLNFNDGNPKGGLKQTVFSTAKGKAVFVSESALARVRQMFQEDYGESVKHEIKTKSRTNQTEIPVNSSFVVPAECPNSTKFLDATKREGNSAASHFTDGNVNASEDSQQDANPFEDEISVPNSQVQGFGQNTALLGHVPVPNKQMKQSDSSTSNLGFFSTASGKPVQLSEESLKKARQLFSEMESSHSSGLQEFQVEGDVEKSEKLAEEVFPRKMQLEERENASTKMISGPAFGFSTASGKQVTVSENAYQKAKAILKESDDFLSNELCIIDQLHAIKESGHRTKSRTGNVISESKTDKSCDELDFKSIHPEEMKSSSSTHHLKMPEYVPHSKKNSQLALVKNSFKQEETGPVRKGLNLGMKTESEAVSCSATAKAEINDELFQTPKSHFKVGTVGNEKASVGDHLSDPGAKTNSAQSFCGKTSDKSFQNKTFGKRHFEEKNALGEPPIKRQLLLEFDKTKMPPRSLKASKSTPEGIFKDRRKFLYHVPLKPVTCQPFGASKERQEVRNPTLTLPDQDFKGFKSKPAIFQHCALRQSSNDASRLSTPHKASAQESEEKRNLNKSGKTAKTFVPPFKTKLTFSTSEQGSSKRCDSPISKNMTEEREINQIRIEKDTAETRDHPSCILHAADTDLENGNLVMNKMMANLRCARDLQEMRIKKKFRQNISSQPGSLYVIKTSARNRISLKTAVEEKSPSFYSTEELYRYGVSKHCVQVNSTNAESFQFLIKDFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVAFPHEFATRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKIISLNAVVSPSNNNMESKKGAAIIEVTDGWYGIRALLDPPIKAFLHRRRLTVGQKIIVHGAELVGSQNGCTPLEAPDSLMLKISANSTRCARWHAKLGFHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRAYPIQWMEKTSAGSYVFRNSRAEEREAARHAEDQQKKLEALFAKIQAEFEKHEGHQDSCHTDRGFRVLSCSDLLLTNYPLGAVYNVIRRQLSTRSFRLQGYLSEDQLKALNAHRQLMNDKKQTRIQEEFKKAVESAEKEKYGCSKRDVSTVWKLCVVDYRKQEKHKGVILSIWRPPLDVCSLLKEGSRYRIYQLSASQSKGRAESTNIQLTATKKTQYLQLSVSKKMLLQIFFPRKALKFTSLLDPSFQPPCAEVDLVGVVISVSKTGFATMVYLSDESYNLVAIKVWADLRHFAIEDIVVRSSFISASNLQWQSDFRSEIPMLVAGDLSVFSASPKETYLQEKFNELRSLVENVDSFCSDAESKLMNLLQRSQSLTPTLPKRCGSECFSPSCNSGLYAADKSLISSSKMEIKYLSPLSTSTPNMKLVPQGSAKTPSFDEDHPKNSKKRKAMDFLSCIPAPPPLTPICSTISPSLKKAFQPPRSLGLQRSKSGKETNPNVGFVTPSRKVREAVRVPVNDLVADEELAMINTQALINTLPEEKKTEGVNETSTIATNLSDDLSSKRSSRSTEEAKNSLKSSSEGAEALQEDDAATKELGGSLSTHRMLQRRKSRKCY</mol_seq> | |
1236 </sequence> | |
1237 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">anas_platyrhynchos</property> | |
1238 </clade> | |
1239 <clade branch_length="0.083504"> | |
1240 <confidence type="bootstrap">100</confidence> | |
1241 <taxonomy> | |
1242 <id>9005</id> | |
1243 <scientific_name>Phasianidae</scientific_name> | |
1244 </taxonomy> | |
1245 <clade branch_length="0.033173"> | |
1246 <name>ENSMGAG00000015077</name> | |
1247 <taxonomy> | |
1248 <id>9103</id> | |
1249 <scientific_name>Meleagris gallopavo</scientific_name> | |
1250 </taxonomy> | |
1251 <sequence> | |
1252 <accession source="Ensembl">ENSMGAP00000015990</accession> | |
1253 <name>BRCA2-201</name> | |
1254 <location>1:182034286-182069530</location> | |
1255 <mol_seq is_aligned="0">MAYKFGKRPTFFEVFKAHCSDSDLGPISLDWFEELSSEAPPYEPKLLGEPEGPIGWFDQTFKTPKAKSSTDSQLASTPLIFKEQITMPPFSSPGKELDQKKMETSRENLQSPNMAGRKTDQENQILASPHGICHNYTAASPAIFRNTCRTPQKSNIPGPYGSLFCTPKFLEIRTPKRICESLGAEVDPEMSWTSSLATPPTLGATVIIARENDSISGAKQQDERAEIVFHNFLSKNGEYTTKNDTSLLSIPETVKLNAKDDIKDLELEMLDGIFGEMNSFEDSFNLPAESSGTLLLLPRALDAIEKCEIKIDEAQGKDDVLSEQRMRRKTAISQEVKAANLSEKSCCVEVKDSVFQNTDEDIVDSKDSSLIGHEKELEYLRIAGNLQDNRTQKSSVNEKLMKDVLSSSNQWSQLNLSDLDVTHLETSMCSSPQSDLHREKGLEEKSELMTKDDVVETSLLNTGDLKNAQELSSASLSENCSDTEISKNIPMTEITPVKPLCASPKLVKGCAHEGVCKMNFLNCSSFLIESTNVMEYSVVYNSTFSTHLKATSKSVVTDVFSHPLICSAASPDNCSDLHLTNSENALRKSSFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPANPLLTRLESDLHEFKGCQVATGVNQDCLLSAKRQSNIKENNFNTPTTEIDAMDNSSDNSVNNRLKQQELSDSGKNAREYQPATSFKCLEASHTQSEDTTDCLKSGRISDIKHKVLTSAYLMARRCSRVFPEDCCLKKGKNDPYISPNMNSQTAVPQSPIGQPPQSFPSCSDCLSDIHHGTAFVANSKFSNTLSQIKFGMNRVGGNSCNKISADKRHATDQLSAEYREIVAPLEINCLENNSTGLKQRGKEDVAENQETFSMKNSENSQAAAWNNKSVEVAEEFLDCIDNSLNEVISEEDRQLAPVCFNTKPIENLEHKGKSSGDLHTCSSSLRFGGFQTASNKQIKFSESSIAKGKMLFKDIENECFEASSMERVRHFSNQVQKENIFSSDLESKKGSTSSGLQTRCTQYIPCKVDLCKNSLRNKLSVQEPTQSLTASQEAEIAELSNILEETGSQFEFTQFRKQSNMIQSHVQQFGATNVENASEAGEDTNFYSTFKSENHVINDEYCSKLKNENECKMVEYEKENTVVFHKNKKKITSSNLDRNKSGISNHESCLVPLQASFSNFVGFTSAGGKKINISKAALTRSAELFKDLDDDSFLFKSSETNTGCCNSDGHVSSNGNFIRCQTKEDEGGILCVPNIRSIGPISHHSEYVEDISTPCKESTENWTEILSDNENVDFSCTNARYSASGMRNNPSSFKKPHQNCKNSDQFLNREDSHVEGCLQEDTSYLMCLGDNTNSTEERGLSVSDEMGNLSPNQKEDKKQEDEHLLLNCQAADTDAVSISDSSLCSSLRDLNVQCGERDTDVSENSSKQKTNSVNVEGEDSTNKNPLVSESGIKIGSYQHHQVPSEQEMDVEKNEVKGTYLTGFHTASGKKITIADGFLAKAEQFFSENNVDLGKDDNDYFEDCLRKCNKSCVKDRGLYMDGVAQRDADVLNFKDKLISEEPGDQRKQAIEGSPIKQAINHDSIKVGAFINVDEECERNLAAPCANKESYVRPGKSESLPGHGSNSLSRTLLFEDRKLLAERDVQHSAEKRDNSESKPDFRLKCATSLHFTKVSSDLADIPVPGGIIKTVSAEDSCKSSQSLLLIHGSVPKSSSPYLNCGTKEIGLKRLNEPCSNTDCFTNTADNAHQEQPEVDLPEDGTNLTWLQETSLNAESQKSDLKQMFSTAKGKAVSVSESALSSIRQMFQTGCDEHVKSEIETKSGTNQAEIAGSSSFSIHAGGPGFATFLDPTKSEMNLAASPFINGNGHLIENNRQGANTSADADSVQDFQMQCFEQKSKPLGHLSVPNKQREQSGPSGNLGFFSTASGKPVQLSEASLKKARQLFSEMEGSHSPELQDALLLEDVEKSRNSDEIFPREMQLALPRGKENASTDKISSPALGFSTASGKQVTISESAYRKAKALLKEADDLSSELGVTRELREIKESGQHAKYLTSKVISESKTGKSCSKELDLRSIHPEEMKSFPSTHRVKITEYVSHNKRNSQSAPFKNSFEQEETRLFRKGELNLRMKTEAESDLCSATTKAEINIFQTPKGYLKTEAVESTKAFMEDDLSDSRVQVQSAQSFIGKMSDNFQNKPFGKRHLEEKDSLGEPPIKRQLLLEFEKMKIPPKSFKPLKSTPDGIFKDRRKFMYHVPLKPVTCQPFGTAKERQEVRNPTLTLPDQDSKGFKSVPAVFQHCALRQSSSGASGLFTPHKAMAKESEETRSLCKSGKAVKTFVPPFKTKLMLSTAEQGSSKRCHSPVTNSVTEERELNQIPVEQNSAEAQDHQSCIPHAVVTDVENDNLVKSNMMANLCCARDLQEMRIKKKYRQNISPQPGSLYVIKTSARNRISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPHKFANRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCISKILSLNAALSPGNSNNSTECEKAAAIIEVTDGWYGIRALLDPPLKAFLRRRRLTVGQKIIVHGAELTGSPNGCTPLEAPDSLMLKIAANSTRRARWYTKLGFHRNPGPFPLPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKQEERNCRRAPGSRIVTRQQIHNLQDGAELYEAIQNAPDPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIQEEFKKAVESAEQEKHGCSKRDVSTVWKLFVVDYRKQEKHKGVILSIWRPLLDVCSLLKEGGRYRIYQLSTSQSKGRSDSTNVQLSATKKTQYLQLSVSQKMLLQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRTGFPNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSEFRSEIPVLLAGDLSAFSASPKENHLQEKFSELRRMIENVDSFCSDAERKLMNLLQRNCSLTPILPKKCGLECFSPSCNSGLYAEDESSISSKIEMKHPSPLSASTPNTKLFPQGSAITPSSALSNENHPRNSKKRKAMDFLSCIPAPPSLTPVCSIISPSVKKAFRPPRSLGSQHSKLSKETNPNAGCVTPGRKLREAVQLSDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRASNLSGDTRATNLSGDLSSKNSSRSAKEANSLLKSSSEGADALQKDTEEREGLLSIRRGLQRHKSRKCY</mol_seq> | |
1256 </sequence> | |
1257 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">meleagris_gallopavo</property> | |
1258 </clade> | |
1259 <clade branch_length="0.03556"> | |
1260 <name>ENSGALG00000017073</name> | |
1261 <taxonomy> | |
1262 <id>9031</id> | |
1263 <scientific_name>Gallus gallus</scientific_name> | |
1264 </taxonomy> | |
1265 <sequence> | |
1266 <accession source="Ensembl">ENSGALP00000027524</accession> | |
1267 <name>BRCA2-201</name> | |
1268 <location>1:173820724-173857456</location> | |
1269 <mol_seq is_aligned="0">MAYKSGKRPTFFEVFKAHCSDSDLGPVSLDWFEELSSEAPPYEPKLLGEPEGPIGWFDQTFKTPKAKSSTDSQLASTPLIFKEQNTMPPFSSPGKELDQKKMETSRENLLSPSMAGRKTDQENQILASPHGICHNYTAASPAIVRNPCRTPQGSNIPGPYGSLFCTPKFLEIPTPKRISESLGAEVDPEMSWTSSLATPPTLGVTVIIARENDSISGAKQQDERAEIVLHNFLSEDDGYTAKNDTSLLSIPETVKLNARDDIKDLESEVLDGLFGETNSFEDSFNLPAESSGILLSPRALDAIEKCEIKIDEAQEKSDVLSEQHRRRKSTISQEVKAANWTEKSCCVEVKDSIIQNTNEDIMDSKDNCLLGREKELEYLRIAGNLQDNRTQKSSVNEKLVKDVLSSSSQWSQLNLSGLDVTHLEMSICSSPQSDSCREKGLEEKSVLMTKDDAVETSLLNTSGLRNAQELSSASLSENGSDTKISKNNPMSEITPVKPVCASPKLVKGYAHEEVSGMSFLNCSSFLIESTNVMEYSVVYNSTFSTHLKATSQSVVTDVLSHPLICSAASPDNCSDLHLRNSEKTLRKSNFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPDNPVLTHLESDLHEFKDCQVATDGNQDCLLSAERQSNIKENNLNTLTIKVDIMDNSSDNSVNNRLKQELSESGKNAREYQPATSFKCLKASHTESEDTTDCLNSGRISNIKHKVLTSAYLMARRHSRLFPEDCCLRKGKNDTYTVSNVNSRAAVPRSPKGQPPQSSPSCSDCLIDMRHGTAFVTNSKFNNTLSHIKFGMNRVSSNSCNKISADKRRASDQLSVAECREIVAPLGINCLENNSTSLKQRGKEDVDENQETLSIKSSENPQAAAWNNESIEVAEEFLDCIDNSLNEVVSEEDRQVAPVYFNTKPIESLEHKGKSSGDLNACSSSLSFGGFQTASNKQIKFSESSIAKGKMLFKDIENEFFEASSMERVRNFSNRVQKENIFSSDLESKTGSTSSGLQTRCMQYIPRKVDLCKNSPRNQLSVQEPNQSLTASQEAEIAELSNILEETGSQFEFTQFRKQSNMIQSHIQQFGATNVENASEAGEDTNFYSTLKSENHVINDEYCSKLKNENECKMVEYEKEDTVVFHKNKRKVTFTNLDRNESRISSHESCPVPLRDSFSNFVGFTSAGGKKINICKAALTRSAELFKDLDDDNFLFKSSGTNTRCCNSDGHVSSNWNFLRCQTKEDEGGILCVPNIKSVGPISHHSEKKYAENISSPCKENTENWTEILSDNVDFSCTNGGYSASGMRNSPSSFKKPHQNCKNSDQFLNQGNSEVEGCLQEDTSYLICLGDNITSAEEHDLNVSDEMENLSPNQKEDRKQEDEHLLLNRQAADTDAVSISDSSFRSSLRDLNVQCGERDTDVSEKSSKQKTNSVSVEGEDSTYKNLFVSESEIKIGSNQRHQVPSEQEMDVDKNKVKGTYLTGFCTASGKKITIADGFLAKAEEFFSENNVDLGKDDNDCFEDCLRKCNKSYVKDRDLCMDSTAHCDADVLNFKDKLIPQEPGDRLKQTIEESPIIQAVNHDSIKVGAFINVDEDCERNLAAPCANKEAYVRPGKSEVESLPVHGNNSLSRTLLLEDRKQFAERDVEYSATKRDNSESKPDSSLKCATSLHLTKVSSHLADNSVPGGIIQTVSAEDSCKSNQSFLLPRGSVPRSTSPYLNCGNKEIDLKRLNEPCSNTDSFTNTVDNAHQEQSEFDLPEDETNLTCLQETSLNAESQKSDLKQVFSTAKGKAVSVSESALASIRQMFQTDCDASVKSEIETKSGTNQTAIAGSSSFSIHAGGPGFATFLDTRKSEMNVAAPHFINGNGNLIENNHQGANMFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSGPSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHSSGLQDAHLLEDVEKSTNHGEVFPREMQLLLPRGKENASTDKISSPALGFSTASGKQVTISESAYQKAKAILKEADGFLSSELGVTNELCEIKESGQHAEYLTGKVISESKTEKSCSEELDLKSIHPEKMKSLPSTHRVKITEYVPHSKRNSQSAPFKNSFEQEETRFFRKGELNLGIKAESESDLCSATSKAEINIFQTPKDYLKTEAVESAKAFMEDDLSDSGVQVKSAQSFGKMSDNFQNKPFGKRHLDEKDSHGEPPIKRQLLLEFEKMKIPPKSVKPLKSTPDGIFKDRRKFMYHVPLKPVTCRPLGTTKERQEVRNPTLTLPDQDLKGFKSIPAVFQHCALRQSSSGASGLFTPHKAVAKDSEETRSLCKSGKAVKTFVPPFKTKLTLSTGEQGGSKRCHSPIRNSVMEERELNQIPVEQNSAEARDHQSCILHAAVTDIENDNLVTSNMMANLHCARDLQEMRIKKKYRQNISPQPGSLYVTKTSARNRISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVCFPHKFANRCLTPETVLLQLKYRYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKVLSLNTAVSPSNSNNNTEGEKAAAIIEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELIGSPNGCTPLEAPDSLMLKIAANSTRCARWYTKLGFHRDPRPFPLPLSSLYSEGGTVGCIDVVVQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKHEERNCRRAPRSRIVTRQQIHNLQDGAELYEAIQNAADPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIREEFKKAVESAEQEKHGFSKRDVSTVWKLFVIDYRKQEKHRGVILSIWRPLLDVCSLLKEGSRYRICQLSTSQSKGRSDSTNVQLSATKKTRYLQLSVSQKMLQQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRTGFSNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSEFRSEIPVLLAGDLSAFSASPKENHLQEKFNELRRMIENVDSFCSDAESKLMNLLQRNCSLTPILPKRCGLECSSPSCNSGLYAEDRSSISSKIETKHPSPLSASTPNTKLFPQGSAITPSSAVSSENHPRNSKKRKAVDFLSCIPAPPPLTPLCSIISPSLKKAFQPPRRLGSQHSKLSKETNPNAGCVTPSRRLREAVQLPDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRATNLSGDTRATNLSRDMRAPNLSGDLSSKNSSRSAKEANSSLKSSSEGADALQKDTEEPEGSLSIRRVLQRRKSRKCY</mol_seq> | |
1270 </sequence> | |
1271 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">gallus_gallus</property> | |
1272 </clade> | |
1273 </clade> | |
1274 </clade> | |
1275 <clade branch_length="0.09653"> | |
1276 <confidence type="bootstrap">100</confidence> | |
1277 <taxonomy> | |
1278 <id>9126</id> | |
1279 <scientific_name>Passeriformes</scientific_name> | |
1280 </taxonomy> | |
1281 <clade branch_length="0.042194"> | |
1282 <name>ENSFALG00000008451</name> | |
1283 <taxonomy> | |
1284 <id>59894</id> | |
1285 <scientific_name>Ficedula albicollis</scientific_name> | |
1286 </taxonomy> | |
1287 <sequence> | |
1288 <accession source="Ensembl">ENSFALP00000008821</accession> | |
1289 <name>BRCA2-201</name> | |
1290 <location>JH603207.1:3296246-3332661</location> | |
1291 <mol_seq is_aligned="0">MACKPGERPTFFEIFKAHCNESDLGPISLNWFEELSAEAPPYEPKSFGEVDGPSGWLDQTAFKTPRTKPSTYSQLASTPLLFKEQNAILPPSPEKEPDQKKIGANRENLISPSNRRRKLDQENEILASPPGTFHNCLAASPAILRNTYRTPQRNNIPGPYGSLFCTPKLSEVRTPKCISESLGAEVDPDMSWSSSLATPPTLGETVIIARENDSISEAKRQDGRADTILHNYFSKHDKCPGISDASMLSVPETVKLNAEDDIKDLESEVLDGLLGEMDSSEDTFSMPAESSRTLLLMPHALDAVEKYEINPDKAQEKGDVPSQQPNGRKNGISQEVKTNSWTENSLCTQVNSSLLQNTHEDTGDGKDGSLIGHEKELESLRKAGDVHDCRPHKSFENERPVKEGVQSPPSQWSQLNSDLDGTHREMSVCSSLPSDLRREENLEEKSLLMAKDDVAETSLLNSSGLIKAQKLFNVDLSEKSREMKDTESNPTSEITPVKSVSLGVQDPELAKECAAEVSKMSFSNCNSFLIEHANVTEYSLVYGGNFSKHLKAASKSVITDVLPHPLVCSATSPDNCDDLHLINSENTPTKSGFKNLKMLPSLRKRSKKFIYRINNTLLYQEEKIQKEVTSESPIHSVLPHLESDSYEFRGCLVASDVKQDHFLPAERKHLESNTSAKNFSTSTSKIDIMDNSSGNSFSDTLEQDLRDLGENAREDQPATSIKCLEVSNTLKEGITNSLNSEIISNIKRKVLTSACLMARKRSKLLPETTCALEKGKEDNMSAKVNDGAAAPQSLEELGSSQRDREVLVDIQGDSTSVTNSSSHNTLCQINLGITGVSSGCCNKLSPHKRHATDQRSGVDCREVHRPLGINCSEYDSTGLKQGEKTDDPANNEDPKPTENSKSPQAAAFSNVAVDISKELLDCIDNNSLNEVISAEDKQIAPMCSSKKPNKNLKCKRESSVNLNACSLNLGFSGFQTASNKQIKFSEASIAKGRLLFKDIENECFEASSMERVSNFPHKVKKENILFSGSKNKLGSNSSDSSDSQASFLEPRHAEFIPHKVGLCKSFPGTPQALQEANQTLTASQEAEIAELSSILEETGSQFEFTQFRKQNNTTQSRSLQKLGTVETRRIKNVENISETRKDMGVCSTLKSENQVKNDKFCTQEEDTNEDSELVENEKENAVFFHKNDKKVTFTNLDINESRRSDESFPIPKQDSFSNFIGFTSAGGKKINISKAALSRSAELFRDLDDDNYLFKSSETGTRCHNSNGSMSSNSNSSRCLTKESKEKTVSDFKSVSHTGSVSYHAQNKNEENTSTGFKEDMENKTKISVNNIENVSFGSISILNCLLSTKNRKQNFKTSKQILNPGDDEGNLQDHSLDVTCLEDAITTAEEHSLNTSCEMENHSPKQKGEDRKEDECLSPKFQTPAAGDISIPDAILDHSLPLFSVQCGEGDVHVLENFDKEKINCKNIEDTAHGKDLLVNESRIEIGSYHHCQIPLEQEVNVGENKVEGSYLTGFHTASGKKIAIADGFLAKAEQFFADVDVGMEHDNFENLIKKRKFGKNCVKDCDLGIESIAQCDSEKPNFNEKLVPEELGDQFNQAIERSPIKHAVILDPGEVDTFVDLGEACEGGLVPSHAHKKADVKPGKSALESHIGQKSDALSRTHLSEDRNFLAEKKVPYSPRKRDDSENTDDFPVHSAASLHLMKVPHDLEDNCVPGDTKNALFVKESNNKADQSLLLDSKSSCSYMNGDSKEFDLEHLNEPAADKNSFTGTIANACQNQSLMSLPEEETNFSRLKETTLKVEKQRGHLKQTVFSTAKGRAVSVSESALARVRQIFQDCSEAVKYEIEPNSKTNQTEIARNSSVVLHTEYPNSAELFNARTSEEVNSAASQFIKVNASADEDSHQEGNTSADAKSVSNSQKQSFEQNIKLLGHFVPNKQIKPSDASTSNFGFFNTASGKPVQLSEESLRKARQLFSEMEGNHSQHVQEAFLVEEDVEKSKMHTEVLPRRMQVVSSKGVENTSPELISDSAFGFSTASGKQVKVSKDAYQKAKAILEESDCILDSGLCTTDHLSSIKDSGQHVKSLTDKVISEFKTEKGCNQNSDFKSTCPQEIKYFPSTYYVKMPEHTPYKKENKQLTSFENNLQQEETESFGKGQLNLGSKPESEAISCSAAAKAEIDTNLLQSPKNYLEVEAAESARAFMEDSFSSSGVQINAAQTFSGRLDKNFQNKSFGKRRFEENNSLGEPPIKRQLLLEFNRTKDSPRSLKASKSTPDGIFKDRRKFMYHVPLKPITCQPFGSTKERQEVKNPTLTLPDQDFRGFQSKPAIFQHCALRHSSDSAAEASTPCKASTKESEEMRSLYKPGKAAKTFIPPFKTKLTFSTCEQGSSKRSDSPISKSMTKEMELNQIRTEQNTADPQDHQSDIQQAADTDLENGNLAVTWMVTNLRCARDLQEMRIKKKCRQNIRSQPGTLYVIKTSASNRISLKTAVEEKSPSFYSTEELYTLGVSKQCVQVNSTNAESFQFLIKDFFSKEYLLAGNGMQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIIWKLAAMEVSFPHEFANRCLTPEMVLLQLKYSRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLDAVASPGNSNKNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRRLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLGFHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRTYPVQWMEKTTAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKHEERSSRRTPRSRIVTRQQIRNLQDGAELYEAIQNASDPGYMEGYLSDDQLKALKAYRQLMNDKKHTQMQEQLKKALESAEQEENGCYKRDVSAVWRLYVTDYRKQEKHKGAVLSIWRPLPDVCSLLKEGTRYRIFQLSASQPRGRADSTNIQLTATKKTQYLQLPVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVSRTGFTTVVYLSDESYNLVAIKIWTDLRHLAIEDVLVRCSLISASNLQWQSEFRSEIPVLLAGDLSLFSASPKEFYLQEKVNELRSVIENVASFCSDAESKLMNLLRRNLLLTPSLTKRCGLESPSPSCSFAEDKSLMSSRTEMKYPSPLSTSTPSMKVVTPGSAKAPSSATVDEDHLKTSKKRKAMDFLSCIPAPPPLTPICSVISPSVKRAFQPPRSLGLQHSKSPKVTDQNSGYVTPCRKVRETVHLPENDLVADEELAMINTQALVNNLPEEKKMDVNENSTATATTLSDDLSSRNSSRSTGEANNSSKSVLK</mol_seq> | |
1292 </sequence> | |
1293 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">ficedula_albicollis</property> | |
1294 </clade> | |
1295 <clade branch_length="0.064837"> | |
1296 <name>ENSTGUG00000011763</name> | |
1297 <taxonomy> | |
1298 <id>59729</id> | |
1299 <scientific_name>Taeniopygia guttata</scientific_name> | |
1300 </taxonomy> | |
1301 <sequence> | |
1302 <accession source="Ensembl">ENSTGUP00000012130</accession> | |
1303 <name>BRCA2-201</name> | |
1304 <location>1:50805062-50838975</location> | |
1305 <mol_seq is_aligned="0">MACKPVERPTFFEIFKAHCSESDLGPISLNWFEELSAEAPPYEPKSFAELDGPSGWLDQTAFKTPRTKPSTYSHLASTPLLFKEQNSILPPCSSPEKEPDQKKIGANRENLISPSNTRRKIDQENEILASPPGTCHNCLAASPAVLRSTYRTPQRNNIPGPYGSLFYTPKLSEVRTPKCISESLGAEVDPDMSWSSSLATPPTCVETVIIARQNDSISEAKQQDGRADTILHNYFYKHDKCPGISDASMLSVPETVKLNPEDDIKDFKSEVLDGLLGEMDSFEDTVSMPAESSGTLLLIPHALDAVEKYEINPEKTEEKGDVPSQQPDGKKNGISQEVKTNGWKLENSHCTQVNSSLLQNTSEDGCLIGHKKELESLRNAGDVNDYRPHESFENERPVKESVNSPSSQWSQLNLSGLDKAHMEMSVCSSAPSDLRGGENLEEKSLLMAKDDPVETSLLNSSCLIKAQKLLSVDLSEKCCEMKNTENNSTSEITPVKSVSLSVQDPELVKGCAAEVSKMSFLNCNSFLIEHGNDTECSVVYSEKFPKHLKATSKSVVTDVLSHPLVSSAKSPDNCDDLYLINSENTLTKSGFKNLKMLPSLRKRSKKFIYRINNTLLYQDEKIQKEVTSESPIHTALPHLESDSYEFRDCLVASDVEQDCTFGKYLESNMRTKNFSTSTLKIDLMDNSSDNSFSDGLKQQDLEDLGENAREDQPAASIKCLEVSNTLKEDTTNSLNSEIVSNIKRKVLTSACLMARKRSRFLPKSCALGKGEEGKDISAKVNNGAAVPQSLKELGSSHRDKELLIDIHSDSMSLCQINFGITGVSSDCCNKLSPNKRHSADQRSGVDCGEVQRPLGINCSENDSTVLKQGEKTDAAAFSEDVANTENSKSPQAAAFSNVPVDISKELLGCGDNSLNEVISLEDKQVAPTYSSKMPNKNLKCKGESSVNLNACSLNLGFSGFQTASNKQIKFSEASIAKGRMLFKDIENECFGASSMERVRNFSHQVKKENMLFSDSKSKLGNSQASFLEPRHTQFTPHKVGSCKSFPRTPQALQESNHTLTASQEAEIAELSSILEETGSQFEFTQFRKQSNAIQKTAETHGTKNVENISDTRKDVEVCSTFDSENQVKNDKYCAQEEDTNEDTELVKNEKENAVFFHENDKKVTLTDLDINESRRSDESFPIAKQDSFSNFIGFTSAGGKKINISKAALSRSAELFRDLDDDNYLFKSSETATRCHNSNGSMSSNSNFSRCLTKESKEKTVHVSDFKSVNAVSHTGSNKNEEHTSTVFKENMENKTKISVNNTENVSFDSINIINSLLSTKNHNQNYKTSKEILNQGDDEGNLQDHSLDVTCLEDAITTVEEHRLSTSYGMENQSPKQREDRKENECLSPKLQTPAGGDIFIPDAALDYSLPLFSVQCGEGDVNVLENSDKEKTDCKNMEEDTSHNKNLLVNESRIKIGSYHHSQIPLEQEVNMGGNEVEGSYLTGFRTASGKKIAIADGFLAKAEQFFADVDIGNDNFETLTEKRKCGKNCVKDCDLCIESVAQCDSEKLNLNEKLVAEELGDQAVDSSPIKHAMILDPACEGSLVTSHTHKKADVRPGKSELESLKGQKIDVLSRTHLSEDGKFLAEKMVDYLSRKRDDLGNTHDFPVHSAASLHLIKVPHDVKDNSVPGGTKNTLFVEESNNKGDQSLLLDSKSSCSYINGDSKEFNLKHLNEPAADKNCFTDTIDSACQNQTLVSLLEEETNFNRLKETTLKVEKQRGDLKQTVFSTAKGKAVSVSESALASVRQMFKDCSEAVKYDIEPNSRRNQTEIARNSSVVLHTECPNSANFFNATTSREVNSATSQFIKVNASADENNHQERSTSADAKSVSNSPKQSFEQNSKLLVHFVPNKQIKPSDASTSHFGFFSTASGKPVQLSEESLRKARQLFSEMEDSHSPHVQEAFLVEEDVEKSKMHIEVLPREMQVVSSKGEENTSPELISDSAFGFSTASGKQVKVSKDAYQKAKAILEESDYILSSGLCTTDQLNSIKDSGQHVKSLTDKVISEFKTEKSCNQDSDFKGICPQEIKYFPSTHHVKMPEHTPYNQKKKHLASFKNNFQQAKTESFGQGQLNLWSKTDSEAISCSATAKAEINTNLLQSPKNYLEVEAAESARAFMEDSFSSSGVQINAAQTFSGRPDKNFQTKTFGKRHFEENNSLGEPPIKRQLLLEFNRTKNSPRSLKASKSTPDGIFKDRRKFMYHVPLKPITCQPFGSTEERQEVKNPTLTLPDQDLRGFQSKPAIFQHCALRHSSDSAAGVSTPCKASAKESEETRSLYKSGKAAKTFIPPFKTKLTFSTSEQGSSSRCDSPISKSMTKEMELNQIRTEQNTADPQDQQPCIQHAADTDLENGNLAMARMVTNLRCARDLQEMRIKKKCRQNIRSQPGSLYVIKTSASNRISLKNAVEEKSPSFYSTEELYTYGVSKQCIQVNSTNAESFQFLIKDFFSKEYLLAGNGMHLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIVWKLAAMEVSFPREFANRCLTPEMVLLQLKYRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLNTVVSPSSSNKNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRQLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLGFHRDPRPFPVPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKHEERTSRRTPRSRIVTRQQIHNLQDGAELYEAIQNSSDPGYMEGYLSDDQLKALKAYRQLMNDKKQTQLQEQFKKALESAEQEENGCYKRDVSAVWRLYVVDYRKQEKHKGAVVSIWRPLPDVCSLLKEGARYRIFQLSASQSRGKADSTSIQLTATKKTQYLQLSVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVRRAGFTTVVYLSDESYNLVAVKIWTDLRHLAIEDVVVRCSLISASNLQWQSEFRSEIPMLLAGDLSLFSASPKECYLQEKVNELRSVIENVASFCSNAESKLMNLLQRNLLLTPSLTRRCGLESSSPSCSYTDNRSLISSRIEMKHPSPLSTSTPNMELVTPGSAKTPSPATVNEGHLKTSKKRKAMDFLSCIPAPPPLTPICSVISPSVKRAFQPPRSLGLQHSKSPKETDQNIGLVTPCRKVRETVHLPDDDLVADEELAMINTQALMNNLPEKKKMDYINEISKATATTLSDDVSSRNSSRST</mol_seq> | |
1306 </sequence> | |
1307 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">taeniopygia_guttata</property> | |
1308 </clade> | |
1309 </clade> | |
1310 </clade> | |
1311 </clade> | |
1312 <clade branch_length="0.35271"> | |
1313 <name>ENSACAG00000004541</name> | |
1314 <taxonomy> | |
1315 <id>28377</id> | |
1316 <scientific_name>Anolis carolinensis</scientific_name> | |
1317 </taxonomy> | |
1318 <sequence> | |
1319 <accession source="Ensembl">ENSACAP00000004459</accession> | |
1320 <name>BRCA2-201</name> | |
1321 <location>3:183721796-183749387</location> | |
1322 <mol_seq is_aligned="0">MEDTIVTQSKPQHRCNALSLATKNLEKRSSQNLLSTKILTCVCDSEKSRNTETKHSTPCNIPRKGNLYSHCHTYSQTPENYLETEASESARAFMEDDDLTDSEAERNKKAFASNSEINNSYSYARAGKRCMEKENTFGEPPIKRKLLPEFDQSERSSLKASRSSLDGTMNDRKTNIYGILLKPVNCDSLSFTKEVKKPNFTTPGRDLKGFKSDGPQQHVSKHSSSTSSCVFKQFSNTSVREESKKTDNPTAKTTIKVFVPPFKTKPSASEDEINSKESYFQNNNSVHGELSNTKVHETFLQPEKEKYEKISAVDSEIREIDLGLTNIASLHCARNLQEMRILKKQKQVIGPQPGTLYLMKICATSCRIPLKTAVDEKCPGSYFSEQLYAFGVSKQCLNVNSSNAEHFQFHIQDFFGRECFLDGNGIQLADGGYLIPTDDGKAGKEEFYRALCDTPGVDPKLISKAWVYNHYKWIIWKLAAMEVAFPQEFASKCLTPERVLLQLKYRYDVEVDKSCRSAIKRITERDDVAAKTLVLCISRIISLSSNVSCISGNKSTTEENKKDVAVVEVTDGWYGIKAVLDPSLQSLLHKQKLTVGQKIVVHGAELMGPQDACSPLDVPESLMLKISGNSTRRARWYSTLGYYRDPRPFTLPLSSLFSDGGIVGCIDVVVQRIYPTQWMEKTSTGSYMFRNCRAEEREAAKHAENKQKTLEALLANIQAEFEKNEETGEGKRVLRSRTLTRQQIRSLQDGAELYEAVLNAADPAYMEGYFSEEQLKALNSHRQMVNDKKRAQIEAEFKKAVESAEQDKSSSCSRDVTPVIKVRIVDYRKEEKEVILTIWRPSSHVCTLLKEGCPYRVFHVAASPSKGRAEPTNLQLTATKKTQYLQLPVSQEVLSQVYRPRECLMFSELLLESFRPACSEVDLVGYVVSLRKGTGFSTLVYLSDKDHNLIAVHICTDLRQFAVEDIIIPSMLISATNLQWRPKFYSNIPSLFAGDLSTFSSKPKETRLQEIFNDLRNTVESDSCFQKDAERKLATLLQTNVPQVMNLPKEHDFDPFPSPWRSDAGNKHLISTPNTELRLPSPLSIKRPNTKAPGSLCSTKVKADLQETPKNLEKRKAMDLLSQVPSPPPVKPICTFISPSLKRAFQPPRSSDPHHERFLKKTESTVREPGVKRPNETNFQLENYFVADEELAMINTQAFLSNSTEEKEAGFTEKIAHTSHNDSSNSFSLRNNSCPSGKDKT</mol_seq> | |
1323 </sequence> | |
1324 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">anolis_carolinensis</property> | |
1325 </clade> | |
1326 </clade> | |
1327 </clade> | 1442 </clade> |
1328 <clade branch_length="0.774548"> | 1443 </clade> |
1329 <name>ENSXETG00000017011</name> | 1444 <clade branch_length="0.314542"> |
1330 <taxonomy> | 1445 <name>ENSLACG00000007788</name> |
1331 <id>8364</id> | 1446 <taxonomy> |
1332 <scientific_name>Xenopus tropicalis</scientific_name> | 1447 <id>7897</id> |
1333 </taxonomy> | 1448 <scientific_name>Latimeria chalumnae</scientific_name> |
1334 <sequence> | 1449 <common_name>Coelacanth</common_name> |
1335 <accession source="Ensembl">ENSXETP00000060681</accession> | 1450 </taxonomy> |
1336 <name>brca2-201</name> | 1451 <sequence> |
1337 <location>GL172716.1:1071058-1096238</location> | 1452 <accession source="Ensembl">ENSLACP00000008815</accession> |
1338 <mol_seq is_aligned="0">MAAPQLGKSVFYDLFSTHCSHSDLGPISLNWFEELTAEALPYKSRTCEDHECSLDDLHENNIKTPKLKSSIYSQLDSTPVIFKERLLSPLFASSLTELDKRQNATDNGNNVRLEKSNCTQMQHQASEVFSPSSRCLNESPAVIKEIFKTPLRNKYLHKTPQCDWKPDICSSLFCTPKLMKNQTGCIKESLGAEVDPEMSWSSSLATPPSPTVIIAHANDQPSGNKHAAIVQSLFPNCENMEANNLPPPETGTQNEDRQICAGLEKPGSCSASKTVPEASAISSRAAWKKTVANTVKDEEVSRTVENALEGMEDVLSIFFASEKTPGLRKLKNSTQARRKVESIKSQKCQVSLFKAEEGESILVPLDEHHKCDHEMLMKPEQDYKMNAVNQKIAKETTPYEWSQLNICELDITQSQDSTLHAANLCCEDITVNKSDTCNITEAEKQEEVNEPSTDNVLSNKVGKESTLNVNCINADLNNMASSSNNSVHSLNLSQCEKMDSSEISNSEVGCITKLTTHPAKITTGELSSVDDCAKKPQERVTISTSFSTLKKQSKFMYSVNTVLTGHIASNTSIATRRSLNSHLSSDEPKPHIKENQNEPESNAKYYSNGLQKPVFLEKENDNKGISLCKTISDGQNTSEGARAPDYFEERVPETKDRCKATLSIREKVVATANCFARKQLETDYPEDASAQHEALQFHAKQYVSCSMLNSNVSNDMQIKPQVLTQACDFRSSAENLVEKTKNQLRRNEDQSFSSTGIGKKPASGEKLVGDCNEGSFLHVKQEISAAQALVGNGYETRDTPDVTSDHTRSVISNHGKSLWEEETALTELPVPEILSKTFKGFKTASNKKIHISDKNIVKGCDLFKEIEFGIGDAKPCNEENKEPLKKTPFDVPGYETNLKGFKTASNKEINVSENKFAKGRLLFKDIEEESGQTTAIMAKDNELFIKPASSNKPDIFKSTCIKGMNPSENLDSMPPKKGDVQQSAGLKHSDQIDVFGFDDPPAKGNVQTLGYFNMSASETDFKGFKTASNKDIIISESTLAKGKLIFEDIEDTRYSETGRTIDCKAKGGALSTSNLVMHNTMCKNEPSTSENTNDKAPKRAKVQTPMAENSHLKEPSSDKNAMDAANHQMTLKASAYSPKAASSALPRYKKKPISTTKTSFQLNEHLTESQQAEISELSSILENADSQFDFTQFRKVPSVTEKQNSTEGGSESQNLNNSDVWKDVDFNDSFAAGRDHSEGMEAIPSSPGIKELPSAGECCSKETHDSMPDFVTLAPKQGFLVKQNERLFAGFNLASGKQVNIDNDVLKKAAELFNDIDNDKELLSHAKEESRKSNIKHSSKLINNENCGKTEHTSEHLVCQSNVSLPFIKTLGKNATILVSGNEKSQNQELQLDCLKCESTDVKHTPQKETINDNSKCNESSLSELSMKGFQTASGRNIMMSESSIQKARNIFAEEHEDSFTLRCNIQNTIQIPQPVNEPTQFPYVNLGPKPTTTSGWQEKNILRRSTEKGFMPGFCTAGGKKVSVSDNSLAKAHKLFQEECTFSKEGKLDEVKQNKLMNSEPLSLLTCESVLKQSDGFIEDISTSRNALEIRPELYPEGMCSNRASNGSGNNSEFTAGEGISININQSSLLTTGNVLKNLPSESSGHDVYSVTEHLSTVVKVKRYNDSGHFVNQNLAECNDNHVLSTQKNTANISNRNEDCTSLAPLSFSTASGKSVTVSHDSLQKARLMLSEAANDVTVDTSKQEAAYITPAIRKTEAEKEQNTVDDSDRVNANTFSFSTASGKKVNISGNSLKQVRAVCLSSDPKETSAALFNVEKSVFNEDVKDVSLLQPNVTMPKAVSFSTASGKTVQLSDESLKKARVIFSEIDTCPLMQQQTNESTVEEIVIGGGMTKSKQMPLTTEKVETTRKNNGTFGFNTASGKQVSVSESALQKVKDIFQEFDDPDNYEQNKSLVRLPVSSKIKESTPGTKRLVQTAGSSYKNDNLQCKAGNLRTFQDKQAGKKSLTYSEAAISPIESSVPIYEMQVMLKHTNNQACKYQPRVEVPLQDQRWQNILEIELPATCAPAFRETHNILFFGDLQHSTHFDICSLYSGKNPAVKHQLASHSKMQTLVISGRDSSGTLTLQFTLRIVILHTVNNQYSLNKQLFTFSSALRQVTCIPTQAHLHSKVKIFHQSLPIKSPDVASDSTSKSYSPTAAKETINCSSASKIPAKKFVPPFKKTVATLADNQSNSVQNGSSDGLIESIVYPKEDKVETICSSKDQFDDSDILQMTSNLRCSKDLQEMRIRKKLRQKIKPHPGSLYRLKMSHVKRISLQSAVAERCPTLYSREQLYRYGIVKNHIGVSSENALSFQFHCSNYFTKELLLSGNGVQLADGGWLIPTEQGNAGKEEIYRAFCDTPGVDPKLISAEWVHNHYRWIVWKLAAMEVRFPKTFACRCLTPERVLLQLKYRYDVEIDKSQRSAIKKIMERDDSPAKTLVLCIAKIISQGTRLPNACSNKTEPADSKESSAVIEVTDSWYGIKVLLDPCLTALLHKGRLFIGQKLIVHGAELIGSDDACSPLEAPESLMLKIAANSTRPVRWHTKLGYFKDPRPFCLHLSSLLSEGGVVGCVDVVIQRIYPMQWMEKMANGLYVFRNDRAEEREAEKHSANQQKKLEMLFSKIQAEFEQREVTCNRRKGLRRRSLNAQQMQTLQDGAEIYEAIQNESDPGYLESYLSAEQLKALNHHRQLLNDKKQALIQAEFRKAIECSEQDANGCTRRDVTPVWKLRIADYRNYETDAAYILNIWRPLPDVLSLLKEGCRYKMYHLAASTSKGKSLAADLQLTATKKTRFQQLQLSESILEQIYSPREVTDFSRFQEPLFSAPYAEVDLVGLIISIYKKTGAAPVVYISDESHNIVALKFWTDLGQLGLEEITKPRTYISASNLRWRSDCIEGIPTLYVGDLANISSNPKESHLQRAIQKLKLSVQNVQDFWNSSQTALMKTLQINSTDTTECSKNPTTPTWKSDVSARSGYLTPLHHSGKRLLNSVHTSDPQTENPGCSKEIQLKTCKKRKALDFLNRIPSPPPVTPVRPFVSPSLQKAFRPPRSCSVQKLGPETKGNTENVQGTTPECTKDLAKLEGEFVADEELAMINTQALLLGLEEEKKKTEQKTSRTAGKMTAHESPIENASPVPAQEQQTEEALNIPVGNSEKSYLCLRKRKRK</mol_seq> | 1453 <location>JH127744.1:299190-332700</location> |
1339 </sequence> | 1454 <mol_seq is_aligned="0">MEWEAVESVKALMRDDELTDAGLDASKDSLNRACRRQSGGNFRARKRMRLEQVSADEPPVKRQLLAEFDRTVENGHKSLQKPLICTPNGTLKDRRKFMYSVPLKPVVCGPWSNNSKTGQQVTKPSITLPGRGVETFQPKNHIAPSPVYDPPSNRRGPVFAPPFHGATFRGLQKPSASHTSSKTAKTFVPPFKMKASASHTVHFSSKVINTCEKILENLVYLKPSLASCNIFQSLEEMTANLQCARDLQEMRLRKKQRQNIRPQPGSLYLAKTSGVARVSLKAATGNQCPSSYSTEQLYVHGVGKSTLKVRSENAESFQFSCSDYFGKDVLLAGNGLKLADGGWLIPSDKGMVGKEEFYRALCDTPGVAPKLISESWVYNHYRWIVWKLAAMEAAFPKEFGNRCLTPERVLLQLKYRYDIEVDKCRRSTVKKIMERDDTAAKTLVLCISKLISVEDRFKQTKNKNEKGAEEARKEAVAGVIETTDGWYGIKVLLDPPLTVLVQRGRLSVGCKIITHGAEIIGSQDACTPLEAPECLMLKISANSTRPACWSAKLGFHRDPRPFPLPLASLFNDGGLVGCVDVVVVRLYPIQWMEKKSDGIFVFRNDRAEEREAQRQVENQQRKMESLFAKIQTEFEQKYEAKSKRRGQKAQKFSKQEIQALQDGAELNEAIENSMDPGYFEACLREEQLKVLHGHRQMLNEKKQAEFQAEFKKALESAEQEGKSCCKRGVTPVWKLRIVDYRKPSAAEYILNIWRPLADLHSLLKEGNRYRIYQLLASQSKGRTTTADIQLTATKKTQYQQFQSFPELISELYSPRKAVKFNMLMDPTFRPAYAEVDLVGYTISIEGKPGVAPVVYLSDESHNFVAIKVWTALNQLAVEDIVKPFSLIAASNLQWRSDSRSIIPMLYAGDLSIFSSNPKEGHLQEAFNQRRTAIQENISGTYLPPEKKNLHQESYKSCQYNTLNVLMNGNIHTQSPVLSRVHMGTSCAFLFLLPSPYPESKHTSPLITMKAGVKSMTFPGSAKLMPQASENQELDTPKNRKKKAALDYLCRIPSPPALTPIRSFVSSSLQKAFHPPRSCVKLQSGENPVVPTVGNNAVLGIQSKKDEGPAAFNEEDSVADEELAMINTQAFLVGLRRDKRPSLLDKTASLKGHVPSERFLEEKLLSVLKEQASSNSERNATSLENKSCDKSRTCVKPCEHSNDSIAEETSEIIPGCHGGESAVENQSKNSSLCHKKLQQKKRRKYY</mol_seq> |
1340 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">xenopus_tropicalis</property> | 1455 </sequence> |
1341 </clade> | 1456 <property datatype="xsd:string" ref="Compara:genome_db_name" applies_to="clade">latimeria_chalumnae</property> |
1342 </clade> | 1457 </clade> |
1343 </clade> | 1458 </clade> |
1344 </clade> | 1459 </clade> |
1345 <property datatype="xsd:string" ref="Compara:gene_tree_stable_id" applies_to="phylogeny">ENSGT00390000003602</property> | 1460 <property datatype="xsd:string" ref="Compara:gene_tree_stable_id" applies_to="phylogeny">ENSGT00390000003602</property> |
1346 </phylogeny> | 1461 </phylogeny> |