Mercurial > repos > earlhaminst > ete

annotate test-data/lineage-full.txt @ 14:d40b9a7debe5 draft default tip

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 71b9c1035f713be174bfcf5ecb20804495f39258
author earlhaminst
date Thu, 07 Mar 2024 19:39:30 +0000
parents f1eca1158f21
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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6
f1eca1158f21 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 133bb57feca9672734d664e6b34e428488cf2e73
earlhaminst
parents: 4
diff changeset
1 # query kingdom family
4
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
2 Latimeria chalumnae Metazoa Coelacanthidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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3 Xenopus tropicalis Metazoa Pipidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
4 Ornithorhynchus anatinus Metazoa Ornithorhynchidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
5 Macropus eugenii Metazoa Macropodidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
6 Sarcophilus harrisii Metazoa Dasyuridae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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7 Monodelphis domestica Metazoa Didelphidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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8 Echinops telfairi Metazoa Tenrecidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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9 Procavia capensis Metazoa Procaviidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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10 Loxodonta africana Metazoa Elephantidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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11 Dasypus novemcinctus Metazoa Dasypodidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
12 Choloepus hoffmanni Metazoa Megalonychidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
13 Ochotona princeps Metazoa Ochotonidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
14 Oryctolagus cuniculus Metazoa Leporidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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15 Cavia porcellus Metazoa Caviidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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16 Ictidomys tridecemlineatus Metazoa Sciuridae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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17 Dipodomys ordii Metazoa Heteromyidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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18 Rattus norvegicus Metazoa Muridae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
19 Mus musculus Metazoa Muridae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
20 Tupaia belangeri Metazoa Tupaiidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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21 Otolemur garnettii Metazoa Galagidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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22 Microcebus murinus Metazoa Cheirogaleidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
23 Tarsius syrichta Metazoa Tarsiidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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24 Callithrix jacchus Metazoa Cebidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
25 Chlorocebus sabaeus Metazoa Cercopithecidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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26 Papio anubis Metazoa Cercopithecidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
27 Macaca mulatta Metazoa Cercopithecidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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28 Nomascus leucogenys Metazoa Hylobatidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
29 Pongo abelii Metazoa Hominidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
30 Gorilla gorilla gorilla Metazoa Hominidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
31 Pan troglodytes Metazoa Hominidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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32 Homo sapiens Metazoa Hominidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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33 Sorex araneus Metazoa Soricidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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34 Erinaceus europaeus Metazoa Erinaceidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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35 Pteropus vampyrus Metazoa Pteropodidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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36 Myotis lucifugus Metazoa Vespertilionidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
37 Felis catus Metazoa Felidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
38 Canis lupus familiaris Metazoa Canidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
diff changeset
39 Mustela putorius furo Metazoa Mustelidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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40 Ailuropoda melanoleuca Metazoa Ursidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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41 Equus caballus Metazoa Equidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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42 Vicugna pacos Metazoa Camelidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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43 Sus scrofa Metazoa Suidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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44 Tursiops truncatus Metazoa Delphinidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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45 Ovis aries Metazoa Bovidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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46 Bos taurus Metazoa Bovidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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47 Anolis carolinensis Metazoa Dactyloidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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48 Pelodiscus sinensis Metazoa Trionychidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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49 Taeniopygia guttata Metazoa Estrildidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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50 Ficedula albicollis Metazoa Muscicapidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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51 Anas platyrhynchos Metazoa Anatidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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52 Meleagris gallopavo Metazoa Phasianidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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53 Gallus gallus Metazoa Phasianidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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54 Lepisosteus oculatus Metazoa Lepisosteidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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55 Danio rerio Metazoa Cyprinidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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56 Astyanax mexicanus Metazoa Characidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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57 Gadus morhua Metazoa Gadidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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58 Oreochromis niloticus Metazoa Cichlidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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59 Poecilia formosa Metazoa Poeciliidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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60 Xiphophorus maculatus Metazoa Poeciliidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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61 Gasterosteus aculeatus Metazoa Gasterosteidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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62 Tetraodon nigroviridis Metazoa Tetraodontidae
87b6de3ef63e planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 41e40314a9b25a9f3c06a13422d367b68334f593
earlhaminst
parents: 2
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63 Takifugu rubripes Metazoa Tetraodontidae