comparison ete_init_taxdb.xml @ 16:e4d5d9a69c9d draft default tip

planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/main/tools/ete commit a0d7ab86b86bb764e457767bf8e8bc29868d0cbb
author earlhaminst
date Mon, 10 Mar 2025 23:28:17 +0000
parents 1e85af7a29c4
children
comparison
equal deleted inserted replaced
15:1e85af7a29c4 16:e4d5d9a69c9d
1 <tool id="ete_init_taxdb" name="ETE taxa DB generator" version="@VERSION@"> 1 <tool id="ete_init_taxdb" name="ETE taxa DB generator" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
2 <description>generates the ETE sqlite DB from the NCBI taxdump.tar.gz</description> 2 <description>generates the ETE sqlite DB from the NCBI taxdump.tar.gz</description>
3 <macros> 3 <macros>
4 <import>ete_macros.xml</import> 4 <import>ete_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="bio_tools"/> 6 <expand macro="bio_tools"/>
27 <outputs> 27 <outputs>
28 <data name="database" format="sqlite" label="${tool.name} on ${on_string}" /> 28 <data name="database" format="sqlite" label="${tool.name} on ${on_string}" />
29 </outputs> 29 </outputs>
30 <tests> 30 <tests>
31 <test> 31 <test>
32 <param name="latest" value="local" /> 32 <conditional name="latestcond">
33 <param name="taxdump" ftype="tar" value="taxdump.tar.gz" /> 33 <param name="latest" value="local" />
34 <param name="taxdump" ftype="tar" value="taxdump.tar.gz" />
35 </conditional>
34 <output name="database" file="taxdump.sqlite" compare="sim_size" /> 36 <output name="database" file="taxdump.sqlite" compare="sim_size" />
35 </test> 37 </test>
36 </tests> 38 </tests>
37 <help><![CDATA[ 39 <help><![CDATA[
38 Generates the ETE sqlite data base from the NCBI taxdump.tar.gz using the `ETE Toolkit`_. 40 Generates the ETE sqlite data base from the NCBI taxdump.tar.gz using the `ETE Toolkit`_.