comparison gafa_datatypes.py @ 6:c15476d4271c draft

planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/GAFA/ commit af1fd308dde99cf40a9422c53dc680932be3765d

5:c388666f58e0

            found_table_names = frozenset(_[0] for _ in results)
            return gafa_table_names <= found_table_names
        return False


# Since Binary.register_sniffable_binary_format() ignores the sniff order declared in datatypes_conf.xml and put TS datatypes at the end, instead of simply doing:
# Binary.register_sniffable_binary_format("sqlite", "sqlite", SQlite)
# we need to register specialized SQLite datatypes before SQlite
for i, format_dict in enumerate(Binary.sniffable_binary_formats):
    if format_dict['class'] == SQlite:
        break
else:
    i += 1
Binary.sniffable_binary_formats.insert(i, {'type': 'gafa.sqlite', 'ext': 'gafa.sqlite', 'class': GAFASQLite})

6:c15476d4271c

            found_table_names = frozenset(_[0] for _ in results)
            return gafa_table_names <= found_table_names
        return False


# Since in Galaxy < 18.01 Binary.register_sniffable_binary_format() ignores the
# sniff order declared in datatypes_conf.xml and put TS datatypes at the end,
# instead of simply doing:
# Binary.register_sniffable_binary_format("sqlite", "sqlite", SQlite)
# we need to register specialized SQLite datatypes before SQlite
try:
    for i, format_dict in enumerate(Binary.sniffable_binary_formats):
        if format_dict['class'] == SQlite:
            break
    else:
        i += 1
    Binary.sniffable_binary_formats.insert(i, {'type': 'gafa.sqlite', 'ext': 'gafa.sqlite', 'class': GAFASQLite})
except AttributeError:
    pass