Mercurial > repos > earlhaminst > gafa
comparison test-data/align2.fasta @ 1:fc8ca4ade638 draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/GAFA/ commit 81a1e79dda127d1afc16c7e456bbec16093a3c3f-dirty
| author | earlhaminst |
|---|---|
| date | Mon, 20 Feb 2017 06:25:33 -0500 |
| parents | |
| children |
comparison
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| 0:af9f72ddf7f9 | 1:fc8ca4ade638 |
|---|---|
| 1 >ENSPTRT00000040521_pantroglodytes_1 | |
| 2 MSNKCDVVVVGGGISGKAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK | |
| 3 VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFR | |
| 4 GPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKE | |
| 5 LLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS | |
| 6 TTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETL | |
| 7 NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY | |
| 8 YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKAR | |
| 9 KLARLTKEERLKKLCELYAKVLGSPEALEPVHYEEKNWCEEQYSGGCYTT | |
| 10 YFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI | |
| 11 LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT | |
| 12 IFSATALGFLAHKRGLLVRV | |
| 13 >ENST00000378069_homosapiens_1 | |
| 14 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK | |
| 15 VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFR | |
| 16 GPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKE | |
| 17 LLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS | |
| 18 TTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETL | |
| 19 NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY | |
| 20 YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKAR | |
| 21 KLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTT | |
| 22 YFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI | |
| 23 LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT | |
| 24 IFSATALGFLAHKRGLLVRV | |
| 25 >ENSRNOT00000044009_rattusnorvegicus_1 | |
| 26 MSNKCDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN | |
| 27 VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR | |
| 28 GPFPPVWNPITYLDYNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE | |
| 29 LLDKICWTNSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS | |
| 30 TTNGGQERKFIGGSGQVSERIKDILGDRVKLERPVIHIDQTGENVVVKTL | |
| 31 NHEIYEAKYVISAIPPVLGMKIHHSPPLPILRNQLITRVPLGSVIKCMVY | |
| 32 YKEPFWRKKDFCGTMVIEGEEAPIAYTLDDTKPDGSCAAIMGFILAHKAR | |
| 33 KLVRLTKEERLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTA | |
| 34 YFPPGILTQYGRVLRQPVGKIFFAGTETASHWSGYMEGAVEAGERAAREI | |
| 35 LHAIGKIPEDEIWQPEPESVDVPARPITNTFLERHLPSVPGLLKLLGLTT | |
| 36 ILSATALGFLAHKKGLFVRF | |
| 37 >ENSMUST00000040820_musmusculus_1 | |
| 38 MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN | |
| 39 VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR | |
| 40 GPFPPVWNPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE | |
| 41 LLDKICWTKSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS | |
| 42 TTNGGQERKFIGGSGQVSERIKDILGDRVKLERPVIHIDQTGENVIVKTL | |
| 43 NHEIYEAKYVISAIPPALGMKIHYSPPLPMLRNQLISRVPLGSVIKCMVY | |
| 44 YKEPFWRKKDFCGTMVIEGEEAPIAYTLDDTKPDGTYAAIMGFILAHKAR | |
| 45 KLVRLTKEERLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTT | |
| 46 YFPPGILTQYGRVLRQPVGKIFFAGTETASHWSGYMEGAVEAGERAAREI | |
| 47 LHAIGKIPEDEIWQPEPESLDVPARPITSTFLERHLPSVPGLLKLFGLTT | |
| 48 ILSATALGFLAHKRGLFVHF | |
| 49 >ENSMUST00000168613_musmusculus_1 | |
| 50 MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN | |
| 51 VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR | |
| 52 GPFPPVWNPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE | |
| 53 LLDKICWTKSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS | |
| 54 TTNGGQGKMLL--------------------------------------- | |
| 55 -------------------------------------------------- | |
| 56 -------------------------------------------------- | |
| 57 -------------------------------------------------- | |
| 58 -------------------------------------------------- | |
| 59 -------------------------------------------------- | |
| 60 -------------------- | |
| 61 >ENSMUST00000163344_musmusculus_1 | |
| 62 MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN | |
| 63 VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKIYKADCH | |
| 64 ALCEPVCNCRDP-------------------------------------- | |
| 65 -------------------------------------------------- | |
| 66 -------------------------------------------------- | |
| 67 -------------------------------------------------- | |
| 68 -------------------------------------------------- | |
| 69 -------------------------------------------------- | |
| 70 -------------------------------------------------- | |
| 71 -------------------------------------------------- | |
| 72 -------------------- | |
| 73 >ENSSSCT00000033745_susscrofa_1 | |
| 74 MAAAKLLHDSGLSVIVLEARDRVGGRTYTVRNQQVKYVDLGGSYVGPTQN | |
| 75 RILRLSKELGLETYKVNEVERLIHYVKGKSYPFRGPLPPVRNPITFLDLN | |
| 76 NLWRTVDDMGREIPSDAPWKAPLAEQWDQMTMKELLDKLCWTESSKQLAT | |
| 77 LFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ | |
| 78 VTERIKDLLGDRVKLERPVVHIDQTGENVLVETLNHEVYEAKYVISAIPP | |
| 79 VLGMKIHFSPPLPMMRNQLITRVPLGSVIKCIVYYKEPFWRHKDYCGSMI | |
| 80 IEGEEAPIAYTLDDSKPDGSCAAIIGFILAHKARKLARLTKEERLKKLCD | |
| 81 LYAKVLGSKEALNPVHYEEKNWCEEQYSAGCYTTYFPPGIMTQYGRVLRQ | |
| 82 PVGRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSE | |
| 83 PESVDVPAKPITTTFLERHLPSVPGLLRLIGLTAIFSATALGYLAHKRGL | |
| 84 LVRV---------------- | |
| 85 >ENSSSCT00000023183_susscrofa_1 | |
| 86 MAAAKLLHDSGLSVIVLEARDRVGGRTYTVRNQQVKYVDLGGSYVGPTQN | |
| 87 RILRLSKELGLETYKVNEVERLIHYIKGKSYPFRGPLPPVRNPITFLDLN | |
| 88 NLWRTVDDMGREIPSDAPWKAPLAEQWDQMTMKELLDKLCWTESSKQLAT | |
| 89 LFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ | |
| 90 VTERIKDLLGDRVKLERPVVHIDQTGENVLVETLNHEVYEAKYVISAIPP | |
| 91 VLGMKIHFSPPLPMMRNQLITRVPLGSVIKCIVYYKEPFWRHKDYCGSMI | |
| 92 IEGEEAPIAYTLDDSKPDGSCAAIIGFILAHKARKLARLTKEERLKKLCD | |
| 93 LYAKVLGSKEALNPVHYEEKNWCEEQYSAGCYTTYFPPGIMTQYGRVLRQ | |
| 94 PVGRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSE | |
| 95 PESVDVPAKPITTTFLERHLPSVPGLLRLIGLTAIFSATALGYLAHKRGL | |
| 96 LVRV---------------- | |
| 97 >ENSCAFT00000022963_canisfamiliaris_1 | |
| 98 MSGKCDVVMVGGGISGMAAAKLLHDFGLNVVVLEARDRVGGRTYTIRNQK | |
| 99 VKYLDLGGSYVGPTQNCILRLAKELGLETYKVNEVERLIHHVKGKSYPFR | |
| 100 GPFPPVWNPIAYLDHNNLWRTMDDMGREIPSDAPWKAPLAEEWDHMTMKE | |
| 101 LLDKICWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS | |
| 102 TTNGGQERKFVGGSGQVSERIMDLLGDQVKLERPVTHIDQTGENVLVETL | |
| 103 NHEVYEAKYVISAIPPTLGMKIHFNPPLPMMRNQLITRVPLGSVIKCIVY | |
| 104 YKEPFWRKKDYCGTMIIEGEEAPIAYTLDDTKPDGNYAAIMGFILAHKAR | |
| 105 KLARLTKDERMKKLCELYAKVLGSQEALQPVHYEEKNWCEEQYSGGCYTT | |
| 106 YFPPGIMTQYGRVLRQPVGRIYFAGTETATHWSGYMEGAVEAGERAAREI | |
| 107 LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTA | |
| 108 IFSATALGVLAHKRGLLVRV |