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diff test-data/align2.fasta @ 1:fc8ca4ade638 draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/GAFA/ commit 81a1e79dda127d1afc16c7e456bbec16093a3c3f-dirty
author earlhaminst
date Mon, 20 Feb 2017 06:25:33 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/align2.fasta	Mon Feb 20 06:25:33 2017 -0500
@@ -0,0 +1,108 @@
+>ENSPTRT00000040521_pantroglodytes_1
+MSNKCDVVVVGGGISGKAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK
+VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFR
+GPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKE
+LLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
+TTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETL
+NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY
+YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKAR
+KLARLTKEERLKKLCELYAKVLGSPEALEPVHYEEKNWCEEQYSGGCYTT
+YFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI
+LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT
+IFSATALGFLAHKRGLLVRV
+>ENST00000378069_homosapiens_1
+MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK
+VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFR
+GPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKE
+LLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
+TTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETL
+NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY
+YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKAR
+KLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTT
+YFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI
+LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT
+IFSATALGFLAHKRGLLVRV
+>ENSRNOT00000044009_rattusnorvegicus_1
+MSNKCDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
+VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR
+GPFPPVWNPITYLDYNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE
+LLDKICWTNSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
+TTNGGQERKFIGGSGQVSERIKDILGDRVKLERPVIHIDQTGENVVVKTL
+NHEIYEAKYVISAIPPVLGMKIHHSPPLPILRNQLITRVPLGSVIKCMVY
+YKEPFWRKKDFCGTMVIEGEEAPIAYTLDDTKPDGSCAAIMGFILAHKAR
+KLVRLTKEERLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTA
+YFPPGILTQYGRVLRQPVGKIFFAGTETASHWSGYMEGAVEAGERAAREI
+LHAIGKIPEDEIWQPEPESVDVPARPITNTFLERHLPSVPGLLKLLGLTT
+ILSATALGFLAHKKGLFVRF
+>ENSMUST00000040820_musmusculus_1
+MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
+VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR
+GPFPPVWNPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE
+LLDKICWTKSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
+TTNGGQERKFIGGSGQVSERIKDILGDRVKLERPVIHIDQTGENVIVKTL
+NHEIYEAKYVISAIPPALGMKIHYSPPLPMLRNQLISRVPLGSVIKCMVY
+YKEPFWRKKDFCGTMVIEGEEAPIAYTLDDTKPDGTYAAIMGFILAHKAR
+KLVRLTKEERLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTT
+YFPPGILTQYGRVLRQPVGKIFFAGTETASHWSGYMEGAVEAGERAAREI
+LHAIGKIPEDEIWQPEPESLDVPARPITSTFLERHLPSVPGLLKLFGLTT
+ILSATALGFLAHKRGLFVHF
+>ENSMUST00000168613_musmusculus_1
+MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
+VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR
+GPFPPVWNPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE
+LLDKICWTKSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
+TTNGGQGKMLL---------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------
+>ENSMUST00000163344_musmusculus_1
+MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
+VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKIYKADCH
+ALCEPVCNCRDP--------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------------------------------------
+--------------------
+>ENSSSCT00000033745_susscrofa_1
+MAAAKLLHDSGLSVIVLEARDRVGGRTYTVRNQQVKYVDLGGSYVGPTQN
+RILRLSKELGLETYKVNEVERLIHYVKGKSYPFRGPLPPVRNPITFLDLN
+NLWRTVDDMGREIPSDAPWKAPLAEQWDQMTMKELLDKLCWTESSKQLAT
+LFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ
+VTERIKDLLGDRVKLERPVVHIDQTGENVLVETLNHEVYEAKYVISAIPP
+VLGMKIHFSPPLPMMRNQLITRVPLGSVIKCIVYYKEPFWRHKDYCGSMI
+IEGEEAPIAYTLDDSKPDGSCAAIIGFILAHKARKLARLTKEERLKKLCD
+LYAKVLGSKEALNPVHYEEKNWCEEQYSAGCYTTYFPPGIMTQYGRVLRQ
+PVGRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSE
+PESVDVPAKPITTTFLERHLPSVPGLLRLIGLTAIFSATALGYLAHKRGL
+LVRV----------------
+>ENSSSCT00000023183_susscrofa_1
+MAAAKLLHDSGLSVIVLEARDRVGGRTYTVRNQQVKYVDLGGSYVGPTQN
+RILRLSKELGLETYKVNEVERLIHYIKGKSYPFRGPLPPVRNPITFLDLN
+NLWRTVDDMGREIPSDAPWKAPLAEQWDQMTMKELLDKLCWTESSKQLAT
+LFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ
+VTERIKDLLGDRVKLERPVVHIDQTGENVLVETLNHEVYEAKYVISAIPP
+VLGMKIHFSPPLPMMRNQLITRVPLGSVIKCIVYYKEPFWRHKDYCGSMI
+IEGEEAPIAYTLDDSKPDGSCAAIIGFILAHKARKLARLTKEERLKKLCD
+LYAKVLGSKEALNPVHYEEKNWCEEQYSAGCYTTYFPPGIMTQYGRVLRQ
+PVGRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSE
+PESVDVPAKPITTTFLERHLPSVPGLLRLIGLTAIFSATALGYLAHKRGL
+LVRV----------------
+>ENSCAFT00000022963_canisfamiliaris_1
+MSGKCDVVMVGGGISGMAAAKLLHDFGLNVVVLEARDRVGGRTYTIRNQK
+VKYLDLGGSYVGPTQNCILRLAKELGLETYKVNEVERLIHHVKGKSYPFR
+GPFPPVWNPIAYLDHNNLWRTMDDMGREIPSDAPWKAPLAEEWDHMTMKE
+LLDKICWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
+TTNGGQERKFVGGSGQVSERIMDLLGDQVKLERPVTHIDQTGENVLVETL
+NHEVYEAKYVISAIPPTLGMKIHFNPPLPMMRNQLITRVPLGSVIKCIVY
+YKEPFWRKKDYCGTMIIEGEEAPIAYTLDDTKPDGNYAAIMGFILAHKAR
+KLARLTKDERMKKLCELYAKVLGSQEALQPVHYEEKNWCEEQYSGGCYTT
+YFPPGIMTQYGRVLRQPVGRIYFAGTETATHWSGYMEGAVEAGERAAREI
+LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTA
+IFSATALGVLAHKRGLLVRV