Mercurial > repos > earlhaminst > gafa
view test-data/align1.fasta @ 4:117fc7414307 draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/GAFA/ commit 651fae48371f845578753052c6fe173e3bb35670
author | earlhaminst |
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date | Wed, 15 Mar 2017 20:20:58 -0400 |
parents | fc8ca4ade638 |
children |
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>ENST00000338702_homosapiens_1 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGG RTYTIRNEHVDYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQY VKGKTYPFRGAFPPVWNPIAYLDYNNLWRTIDNMGKEIPTDAPWEAQHAD KWDKMTMKELIDKICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQS SDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIM GFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVE AGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSG LLKIIGFSTSVTALGFVLYKYKLLPRS >ENST00000542639_homosapiens_1 MGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNINVT SEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDL LGDQVKLNHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHF RPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPI SITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGS QEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFA GTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKDVPA VEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS------ -------------------------------------------------- -------------------------------------------------- --------------------------- >ENSPTRT00000040520_pantroglodytes_1 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGG RTYTIRNEHVDYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQY VKGKTYPFRGAFPPVWNPIAYLDYNNLWRTIDNMGKEIPNDAPWEAQHAD EWDKMTMKELIDKICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQS SDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM GAIIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIM GFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVE AGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSG LLKIIGFSTSVTTLGFVLYKYKLLPRS >ENSSSCT00000013404_susscrofa_1 MERQEKANNAGHMVDVVVIGGGISGLSAAKLLNEYGINVLVLEARDRVGG RTYTVRNENVDYVDVGGAYVGPTQNRILRLSKELGLETYKVNVNECLVQY VKGKSYPFRGAFPPVWNPIAYLDYNNLWRTMDDMGKKIPADAPWESPHAE EWDKMTMKDLIDKICWTKTAKRFASLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMHLLGDRVKLRCPVTYVDQS GDNIIVETLNHELYECQYVISAIPPTLTAKIHFRPELPSERNQLIQRLPM GAIIKCMMYYKEAFWKKKNYCGCMIIEDEEAPISITLDDTKPDGSLPAIM GFILARKADRLAKVHKEIRKRKICELYAKVLGSQEALHPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATQWSGYMEGAVE AGERAAREILNALGKVSKKDIWLREPESEDVPAFEITRTFWERNLPSVTG LLKIIGFSTSVTALWLAVYKFRLLTRS >ENSSSCT00000035258_susscrofa_1 SLPAIMGFILARKADRLAKVHKEIRKRKICELYAKVLGSQEALHPVHYEE KNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATQWSGY MEGAVEAGERAAREDVPAFEITRTFWERNLPSVTGLLKIIGFSX------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------------------------- >ENSSSCT00000032764_susscrofa_1 MDDMGKKIPADAPWESPHAEEWDKMTMKDLIDKICWTKTAKRFASLFVNI NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERI MHLLGDRVKLRCPVTYVDQSGDNIIVETLNHELYECQYVISAIPPTL--- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------------------------- >ENSCAFT00000022939_canisfamiliaris_1 MASREKTSIEGHMFDVVVIGGGISGLSAAKLLAEHEVDVLVLEARDRVGG RTYTVRNEHVDYVDVGGAYVGPTQNRILRLSKELGLETYKVNVNERLVQY VKGKTYPFRGAFPPVWNPIAYLDYNNLWRTMDNMGKEIPADAPWEAPHAE EWDKMTMKDLIDKICWTKTARRFASLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMERLGDRVKLKRPVTYVDQS DDNIIIETLNHELYECKYVISAIPPTLTAKIHFRPELPSERNQLIQRLPM GAIIKCMMYYKEAFWKKKDYCGCMIIEDEEAPISITLDDTKPDGSLPAIM GFILARKADRLAKLHKEIRKRKICELYAKVLGSQEALQPVHYEEKNWCEE QYSGGCYTAYFPPGIMTHYGRVIRQPFGRIYFAGTETATHWSGYMEGAVE AGERTAREVLNALGRVAEKDLKTQEPESKDVPAMEITHTFWERNLPSVTG LLKLIGFTTSVTALWIVAYKFRLLRRS >ENSMUST00000026013_musmusculus_1 MTDLEKPSITGHMFDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGG RTYTVRNEHVKWVDVGGAYVGPTQNRILRLSKELGIETYKVNVNERLVQY VKGKTYPFRGAFPPVWNPLAYLDYNNLWRTMDDMGKEIPVDAPWQARHAE EWDKITMKDLIDKICWTKTAREFAYLFVNINVTSEPHEVSALWFLWYVRQ CGGTSRIFSVTNGGQERKFVGGSGQISEQIMVLLGDKVKLSSPVTYIDQT DDNIIIETLNHEHYECKYVISAIPPVLTAKIHFKPELPPERNQLIQRLPM GAVIKCMVYYKEAFWKKKDYCGCMIIEDEEAPISITLDDTKPDGSMPAIM GFILARKAERLAKLHKDIRKRKICELYAKVLGSQEALSPVHYEEKNWCEE QYSGGCYTAYFPPGIMTLYGRVIRQPVGRIYFAGTETATQWSGYMEGAVE AGERAAREVLNALGKVAKKDIWVQEPESKDVPALEITHTFLERNLPSVPG LLKITGFSTSVALLCFVLYKFKQPQS- >ENSRNOT00000066674_rattusnorvegicus_1 MTDLEKPNLAGHMFDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGG RTYTVRNEHVKWVDVGGAYVGPTQNRILRLSKELGIETYKVNVNERLVQY VKGKTYPFRGAFPPVWNPLAYLDYNNLWRTMDEMGKEIPVDAPWQARHAQ EWDKMTMKDLIDKICWTKTAREFAYLFVNINVTSEPHEVSALWFLWYVRQ CGGTARIFSVTNGGQERKFVGGSGQVSEQIMGLLGDKVKLSSPVTYIDQT DDNIIVETLNHEHYECKYVISAIPPILTAKIHFKPELPPERNQLIQRLPM GAVIKCMVYYKEAFWKKKDYCGCMIIEDEEAPIAITLDDTKPDGSLPAIM GFILARKADRLAKLHKDIRKRKICELYAKVLGSQEALYPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIYFAGTETATQWSGYMEGAVE AGERAAREVLNALGKVAKKDIWVEEPESKDVPAIEITHTFLERNLPSVPG LLKITGVSTSVALLCFVLYKIKKLPC-