Mercurial > repos > earlhaminst > gafa

view test-data/align2.fasta @ 4:117fc7414307 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/GAFA/ commit 651fae48371f845578753052c6fe173e3bb35670
author earlhaminst
date Wed, 15 Mar 2017 20:20:58 -0400
parents fc8ca4ade638
children
line wrap: on
line source

>ENSPTRT00000040521_pantroglodytes_1
MSNKCDVVVVGGGISGKAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK
VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFR
GPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKE
LLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
TTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETL
NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY
YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKAR
KLARLTKEERLKKLCELYAKVLGSPEALEPVHYEEKNWCEEQYSGGCYTT
YFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI
LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT
IFSATALGFLAHKRGLLVRV
>ENST00000378069_homosapiens_1
MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK
VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFR
GPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKE
LLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
TTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETL
NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY
YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKAR
KLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTT
YFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI
LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT
IFSATALGFLAHKRGLLVRV
>ENSRNOT00000044009_rattusnorvegicus_1
MSNKCDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR
GPFPPVWNPITYLDYNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE
LLDKICWTNSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
TTNGGQERKFIGGSGQVSERIKDILGDRVKLERPVIHIDQTGENVVVKTL
NHEIYEAKYVISAIPPVLGMKIHHSPPLPILRNQLITRVPLGSVIKCMVY
YKEPFWRKKDFCGTMVIEGEEAPIAYTLDDTKPDGSCAAIMGFILAHKAR
KLVRLTKEERLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTA
YFPPGILTQYGRVLRQPVGKIFFAGTETASHWSGYMEGAVEAGERAAREI
LHAIGKIPEDEIWQPEPESVDVPARPITNTFLERHLPSVPGLLKLLGLTT
ILSATALGFLAHKKGLFVRF
>ENSMUST00000040820_musmusculus_1
MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR
GPFPPVWNPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE
LLDKICWTKSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
TTNGGQERKFIGGSGQVSERIKDILGDRVKLERPVIHIDQTGENVIVKTL
NHEIYEAKYVISAIPPALGMKIHYSPPLPMLRNQLISRVPLGSVIKCMVY
YKEPFWRKKDFCGTMVIEGEEAPIAYTLDDTKPDGTYAAIMGFILAHKAR
KLVRLTKEERLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTT
YFPPGILTQYGRVLRQPVGKIFFAGTETASHWSGYMEGAVEAGERAAREI
LHAIGKIPEDEIWQPEPESLDVPARPITSTFLERHLPSVPGLLKLFGLTT
ILSATALGFLAHKRGLFVHF
>ENSMUST00000168613_musmusculus_1
MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKGKSYAFR
GPFPPVWNPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLAEEWDYMTMKE
LLDKICWTKSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
TTNGGQGKMLL---------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------
>ENSMUST00000163344_musmusculus_1
MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKN
VKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHFVKIYKADCH
ALCEPVCNCRDP--------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------
>ENSSSCT00000033745_susscrofa_1
MAAAKLLHDSGLSVIVLEARDRVGGRTYTVRNQQVKYVDLGGSYVGPTQN
RILRLSKELGLETYKVNEVERLIHYVKGKSYPFRGPLPPVRNPITFLDLN
NLWRTVDDMGREIPSDAPWKAPLAEQWDQMTMKELLDKLCWTESSKQLAT
LFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ
VTERIKDLLGDRVKLERPVVHIDQTGENVLVETLNHEVYEAKYVISAIPP
VLGMKIHFSPPLPMMRNQLITRVPLGSVIKCIVYYKEPFWRHKDYCGSMI
IEGEEAPIAYTLDDSKPDGSCAAIIGFILAHKARKLARLTKEERLKKLCD
LYAKVLGSKEALNPVHYEEKNWCEEQYSAGCYTTYFPPGIMTQYGRVLRQ
PVGRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSE
PESVDVPAKPITTTFLERHLPSVPGLLRLIGLTAIFSATALGYLAHKRGL
LVRV----------------
>ENSSSCT00000023183_susscrofa_1
MAAAKLLHDSGLSVIVLEARDRVGGRTYTVRNQQVKYVDLGGSYVGPTQN
RILRLSKELGLETYKVNEVERLIHYIKGKSYPFRGPLPPVRNPITFLDLN
NLWRTVDDMGREIPSDAPWKAPLAEQWDQMTMKELLDKLCWTESSKQLAT
LFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ
VTERIKDLLGDRVKLERPVVHIDQTGENVLVETLNHEVYEAKYVISAIPP
VLGMKIHFSPPLPMMRNQLITRVPLGSVIKCIVYYKEPFWRHKDYCGSMI
IEGEEAPIAYTLDDSKPDGSCAAIIGFILAHKARKLARLTKEERLKKLCD
LYAKVLGSKEALNPVHYEEKNWCEEQYSAGCYTTYFPPGIMTQYGRVLRQ
PVGRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSE
PESVDVPAKPITTTFLERHLPSVPGLLRLIGLTAIFSATALGYLAHKRGL
LVRV----------------
>ENSCAFT00000022963_canisfamiliaris_1
MSGKCDVVMVGGGISGMAAAKLLHDFGLNVVVLEARDRVGGRTYTIRNQK
VKYLDLGGSYVGPTQNCILRLAKELGLETYKVNEVERLIHHVKGKSYPFR
GPFPPVWNPIAYLDHNNLWRTMDDMGREIPSDAPWKAPLAEEWDHMTMKE
LLDKICWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIIS
TTNGGQERKFVGGSGQVSERIMDLLGDQVKLERPVTHIDQTGENVLVETL
NHEVYEAKYVISAIPPTLGMKIHFNPPLPMMRNQLITRVPLGSVIKCIVY
YKEPFWRKKDYCGTMIIEGEEAPIAYTLDDTKPDGNYAAIMGFILAHKAR
KLARLTKDERMKKLCELYAKVLGSQEALQPVHYEEKNWCEEQYSGGCYTT
YFPPGIMTQYGRVLRQPVGRIYFAGTETATHWSGYMEGAVEAGERAAREI
LHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTA
IFSATALGVLAHKRGLLVRV