Mercurial > repos > earlhaminst > gafa
view test-data/align1.fasta @ 6:c15476d4271c draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/GAFA/ commit af1fd308dde99cf40a9422c53dc680932be3765d
author | earlhaminst |
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date | Tue, 20 Mar 2018 11:06:51 -0400 |
parents | fc8ca4ade638 |
children |
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>ENST00000338702_homosapiens_1 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGG RTYTIRNEHVDYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQY VKGKTYPFRGAFPPVWNPIAYLDYNNLWRTIDNMGKEIPTDAPWEAQHAD KWDKMTMKELIDKICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQS SDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIM GFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVE AGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSG LLKIIGFSTSVTALGFVLYKYKLLPRS >ENST00000542639_homosapiens_1 MGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNINVT SEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDL LGDQVKLNHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHF RPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPI SITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGS QEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFA GTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKDVPA VEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS------ -------------------------------------------------- -------------------------------------------------- --------------------------- >ENSPTRT00000040520_pantroglodytes_1 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGG RTYTIRNEHVDYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQY VKGKTYPFRGAFPPVWNPIAYLDYNNLWRTIDNMGKEIPNDAPWEAQHAD EWDKMTMKELIDKICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQS SDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM GAIIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIM GFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVE AGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSG LLKIIGFSTSVTTLGFVLYKYKLLPRS >ENSSSCT00000013404_susscrofa_1 MERQEKANNAGHMVDVVVIGGGISGLSAAKLLNEYGINVLVLEARDRVGG RTYTVRNENVDYVDVGGAYVGPTQNRILRLSKELGLETYKVNVNECLVQY VKGKSYPFRGAFPPVWNPIAYLDYNNLWRTMDDMGKKIPADAPWESPHAE EWDKMTMKDLIDKICWTKTAKRFASLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMHLLGDRVKLRCPVTYVDQS GDNIIVETLNHELYECQYVISAIPPTLTAKIHFRPELPSERNQLIQRLPM GAIIKCMMYYKEAFWKKKNYCGCMIIEDEEAPISITLDDTKPDGSLPAIM GFILARKADRLAKVHKEIRKRKICELYAKVLGSQEALHPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATQWSGYMEGAVE AGERAAREILNALGKVSKKDIWLREPESEDVPAFEITRTFWERNLPSVTG LLKIIGFSTSVTALWLAVYKFRLLTRS >ENSSSCT00000035258_susscrofa_1 SLPAIMGFILARKADRLAKVHKEIRKRKICELYAKVLGSQEALHPVHYEE KNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATQWSGY MEGAVEAGERAAREDVPAFEITRTFWERNLPSVTGLLKIIGFSX------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------------------------- >ENSSSCT00000032764_susscrofa_1 MDDMGKKIPADAPWESPHAEEWDKMTMKDLIDKICWTKTAKRFASLFVNI NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERI MHLLGDRVKLRCPVTYVDQSGDNIIVETLNHELYECQYVISAIPPTL--- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------------------------- >ENSCAFT00000022939_canisfamiliaris_1 MASREKTSIEGHMFDVVVIGGGISGLSAAKLLAEHEVDVLVLEARDRVGG RTYTVRNEHVDYVDVGGAYVGPTQNRILRLSKELGLETYKVNVNERLVQY VKGKTYPFRGAFPPVWNPIAYLDYNNLWRTMDNMGKEIPADAPWEAPHAE EWDKMTMKDLIDKICWTKTARRFASLFVNINVTSEPHEVSALWFLWYVKQ CGGTTRIFSVTNGGQERKFVGGSGQVSERIMERLGDRVKLKRPVTYVDQS DDNIIIETLNHELYECKYVISAIPPTLTAKIHFRPELPSERNQLIQRLPM GAIIKCMMYYKEAFWKKKDYCGCMIIEDEEAPISITLDDTKPDGSLPAIM GFILARKADRLAKLHKEIRKRKICELYAKVLGSQEALQPVHYEEKNWCEE QYSGGCYTAYFPPGIMTHYGRVIRQPFGRIYFAGTETATHWSGYMEGAVE AGERTAREVLNALGRVAEKDLKTQEPESKDVPAMEITHTFWERNLPSVTG LLKLIGFTTSVTALWIVAYKFRLLRRS >ENSMUST00000026013_musmusculus_1 MTDLEKPSITGHMFDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGG RTYTVRNEHVKWVDVGGAYVGPTQNRILRLSKELGIETYKVNVNERLVQY VKGKTYPFRGAFPPVWNPLAYLDYNNLWRTMDDMGKEIPVDAPWQARHAE EWDKITMKDLIDKICWTKTAREFAYLFVNINVTSEPHEVSALWFLWYVRQ CGGTSRIFSVTNGGQERKFVGGSGQISEQIMVLLGDKVKLSSPVTYIDQT DDNIIIETLNHEHYECKYVISAIPPVLTAKIHFKPELPPERNQLIQRLPM GAVIKCMVYYKEAFWKKKDYCGCMIIEDEEAPISITLDDTKPDGSMPAIM GFILARKAERLAKLHKDIRKRKICELYAKVLGSQEALSPVHYEEKNWCEE QYSGGCYTAYFPPGIMTLYGRVIRQPVGRIYFAGTETATQWSGYMEGAVE AGERAAREVLNALGKVAKKDIWVQEPESKDVPALEITHTFLERNLPSVPG LLKITGFSTSVALLCFVLYKFKQPQS- >ENSRNOT00000066674_rattusnorvegicus_1 MTDLEKPNLAGHMFDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGG RTYTVRNEHVKWVDVGGAYVGPTQNRILRLSKELGIETYKVNVNERLVQY VKGKTYPFRGAFPPVWNPLAYLDYNNLWRTMDEMGKEIPVDAPWQARHAQ EWDKMTMKDLIDKICWTKTAREFAYLFVNINVTSEPHEVSALWFLWYVRQ CGGTARIFSVTNGGQERKFVGGSGQVSEQIMGLLGDKVKLSSPVTYIDQT DDNIIVETLNHEHYECKYVISAIPPILTAKIHFKPELPPERNQLIQRLPM GAVIKCMVYYKEAFWKKKDYCGCMIIEDEEAPIAITLDDTKPDGSLPAIM GFILARKADRLAKLHKDIRKRKICELYAKVLGSQEALYPVHYEEKNWCEE QYSGGCYTAYFPPGIMTQYGRVIRQPVGRIYFAGTETATQWSGYMEGAVE AGERAAREVLNALGKVAKKDIWVEEPESKDVPAIEITHTFLERNLPSVPG LLKITGVSTSVALLCFVLYKIKKLPC-