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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
author earlhaminst
date Thu, 12 Apr 2018 06:59:23 -0400
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daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
earlhaminst
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1 <html>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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2 <head>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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3 <meta http-equiv=content-type content=text/html;charset=ISO-8859-1>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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4 <title>input.pir</title>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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5 <style media=screen type=text/css><!--
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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6 .BL {background-color:navy;color:navy}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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7 .A1 {background-color:black;color:lime}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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8 .G1 {background-color:black;color:lime}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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9 .S1 {background-color:black;color:lime}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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10 .T1 {background-color:black;color:lime}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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11 .C1 {background-color:black;color:orange}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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12 .P1 {background-color:black;color:aqua}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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13 .D1 {background-color:black;color:white}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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14 .E1 {background-color:black;color:white}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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15 .Q1 {background-color:black;color:white}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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16 .N1 {background-color:black;color:white}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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17 .F1 {background-color:black;color:yellow}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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18 .W1 {background-color:black;color:yellow}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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19 .Y1 {background-color:black;color:yellow}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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20 .H1 {background-color:black;color:red}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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21 .K1 {background-color:black;color:red}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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22 .R1 {background-color:black;color:red}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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23 .I1 {background-color:black;color:fuchsia}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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24 .L1 {background-color:black;color:fuchsia}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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25 .M1 {background-color:black;color:fuchsia}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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26 .V1 {background-color:black;color:fuchsia}
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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27 --></style>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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28 </head>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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29
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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30 <body bgcolor=#f5f5a3>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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31 <h2>Gblocks 0.91b Results</h2>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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32 <p>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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33 Processed file: <b>input.pir</b><br>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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34 Number of sequences: <b>17</b><br>Alignment assumed to be: <b>Protein</b><br>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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35 New number of positions: <b>56</b> (selected positions are underlined in blue)
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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36 </p>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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37 <pre>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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38 10 20 30 40 50 60
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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39 =========+=========+=========+=========+=========+=========+
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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40 nad3_parde ------MEYLLQEYLPI<span class=L1>L</span>VFLGMASA<span class=L1>L</span>AIV<span class=L1>L</span>ILAAAVIAVRN--PDP<span class=E1>E</span><span class=K1>K</span>V<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span>NA<span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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41 nad3_acaca ---------MTLEYIYIFIFFWGAFFI<span class=S1>S</span>CL<span class=L1>L</span>IFLSYF<span class=L1>L</span>VYQE--SDI<span class=E1>E</span><span class=K1>K</span>N<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span>Q<span class=P1>P</span><span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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42 nad3_allma --------------MTY<span class=L1>L</span>VYIVFTIV<span class=L1>L</span>TVG<span class=L1>L</span>ILVSYL<span class=L1>L</span>SQAQ--PDS<span class=E1>E</span><span class=K1>K</span>V<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span>S<span class=P1>P</span>L
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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43 nad3_apec -----------IFNFLT<span class=L1>L</span>FVSILIFLITTLITFAAHF<span class=L1>L</span>PSRN-TD-S<span class=E1>E</span><span class=K1>K</span>S<span class=S1>S</span>P<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span>L
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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44 nad3_arath ---------MMSEFAPISIYLVISLLV<span class=S1>S</span>LI<span class=L1>L</span>LGVPFPFASNS-STYP<span class=E1>E</span><span class=K1>K</span>L<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span>S
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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45 nad3_balca -------------MNSF<span class=L1>L</span>IYLLIAIT<span class=L1>L</span><span class=S1>S</span>FI<span class=L1>L</span>SIVGHR<span class=L1>L</span>PTRN-MD-Q<span class=E1>E</span><span class=K1>K</span>L<span class=S1>S</span>P<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span>Q
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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46 nad3_chocr ------MKLIFTEYSAI<span class=L1>L</span>IFFAISSL<span class=L1>L</span><span class=S1>S</span>SVIFLLSYF<span class=L1>L</span>IPQK--PDQ<span class=E1>E</span><span class=K1>K</span>V<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span>N<span class=P1>P</span><span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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47 nad3_drome -------------MFSIIFIALLILLITTIVMFLASI<span class=L1>L</span>SKKA-LIDR<span class=E1>E</span><span class=K1>K</span>S<span class=S1>S</span>PF<span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span>K
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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48 nad3_human -------------MN-FALILMINTL<span class=L1>L</span>ALL<span class=L1>L</span>MIITFW<span class=L1>L</span>PQLN-GY-M<span class=E1>E</span><span class=K1>K</span>STP<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span>M
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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49 nad3_ktun -------------MFFV<span class=L1>L</span>SLVLFTFL<span class=L1>L</span><span class=S1>S</span>LV<span class=L1>L</span>LSVSLS<span class=L1>L</span>TKKK-MMNR<span class=E1>E</span><span class=K1>K</span>S<span class=S1>S</span>PF<span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span>K
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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50 nad3_lter -------------MILTALSSAIALLVPIIILGAAWV<span class=L1>L</span>ASRS-TEDR<span class=E1>E</span><span class=K1>K</span>S<span class=S1>S</span>PF<span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span>K
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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51 nad3_marpo -----------MEFAPIFVYLVISLL<span class=L1>L</span><span class=S1>S</span>LI<span class=L1>L</span>IGVSFLFASSSSLAYP<span class=E1>E</span><span class=K1>K</span>L<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span><span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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52 nad3_metse ---------MYTEFYGI<span class=L1>L</span>VLLIFSVV<span class=L1>L</span><span class=S1>S</span>AIISGASYI<span class=L1>L</span>GDKQ--PDR<span class=E1>E</span><span class=K1>K</span>V<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span><span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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53 nad3_picca MLNYFVYPYGIENDMGMKFYMMLVPMM<span class=S1>S</span>MV<span class=L1>L</span>MMINYMMTNKS-DNNMN<span class=K1>K</span>TGP<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span>S<span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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54 nad3_podan -------------MSSMTLFILFVSIIALLFLFINLIFAPHN--PYQ<span class=E1>E</span><span class=K1>K</span>Y<span class=S1>S</span>IF<span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span>HS<span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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55 nad3_prowi ----------MYEFLGI<span class=L1>L</span>IYFFIALA<span class=L1>L</span><span class=S1>S</span>LL<span class=L1>L</span>LGLPFLVSTRK--ADP<span class=E1>E</span><span class=K1>K</span>I<span class=S1>S</span>A<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span><span class=D1>D</span><span class=P1>P</span><span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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56 nad3_recam -----MNTMILSEYLSV<span class=L1>L</span>IFFIFSFG<span class=L1>L</span><span class=S1>S</span>CIILGLSYV<span class=L1>L</span>ATQN--ADT<span class=E1>E</span><span class=K1>K</span>L<span class=S1>S</span>P<span class=Y1>Y</span><span class=E1>E</span><span class=C1>C</span><span class=G1>G</span><span class=F1>F</span>N<span class=P1>P</span><span class=F1>F</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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57 <span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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58
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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59
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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60 70 80 90 100 110 120
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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diff changeset
61 =========+=========+=========+=========+=========+=========+
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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62 nad3_parde D-D<span class=A1>A</span><span class=R1>R</span>MK<span class=F1>F</span>DV<span class=R1>R</span><span class=F1>F</span>Y<span class=L1>L</span><span class=V1>V</span>S<span class=I1>I</span><span class=L1>L</span><span class=F1>F</span>I<span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span>VAF<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>WAVSFASLS-DVAF<span class=W1>W</span>GLMVFLAV<span class=L1>L</span><span class=T1>T</span>V<span class=G1>G</span><span class=F1>F</span>A
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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diff changeset
63 nad3_acaca E-DT<span class=R1>R</span>SK<span class=F1>F</span>NV<span class=R1>R</span>YY<span class=L1>L</span>I<span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span>M<span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span><span class=I1>I</span>MY<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>WSISISTGS-FFGV<span class=W1>W</span>AIFLFLI<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span>V<span class=G1>G</span><span class=F1>F</span><span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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diff changeset
64 nad3_allma G-D<span class=A1>A</span><span class=R1>R</span>QK<span class=F1>F</span>DVS<span class=F1>F</span>Y<span class=L1>L</span>I<span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span>I<span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span>VVFIL<span class=P1>P</span>FASVIHNVS-LLGG<span class=W1>W</span>ITIIFLV<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span><span class=I1>I</span><span class=G1>G</span><span class=F1>F</span><span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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65 nad3_apec N-S<span class=A1>A</span><span class=R1>R</span>VP<span class=F1>F</span>SF<span class=R1>R</span><span class=F1>F</span>F<span class=L1>L</span><span class=V1>V</span><span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span><span class=L1>L</span>L<span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span><span class=I1>I</span>AL<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>LPFSVFFH--P--IHTP----L<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span>V<span class=G1>G</span>L<span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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66 nad3_arath G-D<span class=A1>A</span><span class=R1>R</span>SR<span class=F1>F</span>DI<span class=R1>R</span><span class=F1>F</span>Y<span class=L1>L</span><span class=V1>V</span>S<span class=I1>I</span><span class=L1>L</span><span class=F1>F</span><span class=L1>L</span><span class=I1>I</span>P<span class=D1>D</span><span class=L1>L</span><span class=E1>E</span>VTFF<span class=F1>F</span><span class=P1>P</span>WAVPPNKID-LFGF<span class=W1>W</span>SMMAFLF<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span><span class=I1>I</span><span class=G1>G</span><span class=F1>F</span>L
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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67 nad3_balca A-S<span class=A1>A</span><span class=R1>R</span>LP<span class=F1>F</span>SL<span class=R1>R</span><span class=F1>F</span>F<span class=L1>L</span><span class=V1>V</span><span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span><span class=L1>L</span>L<span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span><span class=I1>I</span>AL<span class=L1>L</span>L<span class=P1>P</span>FPAALSARDPQLSFTLAFLILL<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span><span class=I1>I</span><span class=G1>G</span>L<span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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68 nad3_chocr D-D<span class=A1>A</span><span class=R1>R</span>AT<span class=F1>F</span>DI<span class=R1>R</span><span class=F1>F</span>Y<span class=L1>L</span><span class=V1>V</span><span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span><span class=L1>L</span><span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span><span class=I1>I</span>SF<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>WSLVLGEIS-IIGF<span class=W1>W</span>SMIVFLV<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span><span class=I1>I</span><span class=G1>G</span><span class=F1>F</span><span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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69 nad3_drome S-SS<span class=R1>R</span>LP<span class=F1>F</span>SL<span class=R1>R</span><span class=F1>F</span>F<span class=L1>L</span>IT<span class=I1>I</span>I<span class=F1>F</span><span class=L1>L</span><span class=I1>I</span><span class=F1>F</span><span class=D1>D</span>V<span class=E1>E</span><span class=I1>I</span>ALIL<span class=P1>P</span>MIIIMKYSNIMIWTITSIIFIL<span class=I1>I</span><span class=L1>L</span>L<span class=I1>I</span><span class=G1>G</span>LY
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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70 nad3_human S-P<span class=A1>A</span><span class=R1>R</span>VP<span class=F1>F</span>SMK<span class=F1>F</span>F<span class=L1>L</span><span class=V1>V</span><span class=A1>A</span><span class=I1>I</span>T<span class=F1>F</span><span class=L1>L</span>L<span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span><span class=I1>I</span>AL<span class=L1>L</span>L<span class=P1>P</span>LPWALQTTNLPLMVMSSLLLII<span class=I1>I</span><span class=L1>L</span>ALSLA
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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71 nad3_ktun S-S<span class=A1>A</span><span class=R1>R</span>LP<span class=F1>F</span>SM<span class=R1>R</span><span class=F1>F</span>F<span class=L1>L</span>ITVV<span class=F1>F</span><span class=L1>L</span>V<span class=F1>F</span><span class=D1>D</span>V<span class=E1>E</span><span class=I1>I</span>VL<span class=L1>L</span>L<span class=P1>P</span>YLFSSGWSIDVFSLVGSMMILV<span class=I1>I</span><span class=L1>L</span>I<span class=I1>I</span><span class=G1>G</span>VL
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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72 nad3_lter S-T<span class=A1>A</span><span class=R1>R</span>IP<span class=F1>F</span>ST<span class=R1>R</span><span class=F1>F</span>F<span class=L1>L</span>L<span class=A1>A</span><span class=I1>I</span>I<span class=F1>F</span>IV<span class=F1>F</span><span class=D1>D</span>I<span class=E1>E</span><span class=I1>I</span>VL<span class=L1>L</span>M<span class=P1>P</span>LPTILHTSDVFTTVTTSVLFLM<span class=I1>I</span><span class=L1>L</span>L<span class=I1>I</span><span class=G1>G</span>L<span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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73 nad3_marpo D-D<span class=A1>A</span><span class=R1>R</span>SR<span class=F1>F</span>DI<span class=R1>R</span><span class=F1>F</span>Y<span class=L1>L</span><span class=V1>V</span>S<span class=I1>I</span><span class=L1>L</span><span class=F1>F</span>I<span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span>VTF<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>WAVSLNKIG-LFGF<span class=W1>W</span>SMMVFLF<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span><span class=I1>I</span><span class=G1>G</span><span class=F1>F</span>V
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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74 nad3_metse G-TPGRP<span class=F1>F</span>SI<span class=R1>R</span><span class=F1>F</span>F<span class=L1>L</span>IG<span class=I1>I</span><span class=L1>L</span><span class=F1>F</span><span class=L1>L</span><span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span><span class=I1>I</span>SF<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>WCVVCNQVF-PFGY<span class=W1>W</span>TMIVFLAV<span class=L1>L</span><span class=T1>T</span>L<span class=G1>G</span>LV
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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75 nad3_picca R-QS<span class=R1>R</span>TTYSIK<span class=F1>F</span>I<span class=L1>L</span>I<span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span><span class=L1>L</span>P<span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span>LTSIL<span class=P1>P</span>YTLSMYNTN-IYGLFILLYFLLP<span class=L1>L</span>I<span class=I1>I</span><span class=G1>G</span><span class=F1>F</span><span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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76 nad3_podan LGQN<span class=R1>R</span>TQ<span class=F1>F</span>GVK<span class=F1>F</span>FIF<span class=A1>A</span>LVY<span class=L1>L</span>LL<span class=D1>D</span><span class=L1>L</span><span class=E1>E</span><span class=I1>I</span>LLT<span class=F1>F</span><span class=P1>P</span>FAVSEYVNN-IYGLIILLGFIT<span class=I1>I</span>I<span class=T1>T</span><span class=I1>I</span><span class=G1>G</span><span class=F1>F</span>V
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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77 nad3_prowi D-D<span class=A1>A</span><span class=R1>R</span>GR<span class=F1>F</span>DIQ<span class=F1>F</span>Y<span class=L1>L</span><span class=V1>V</span><span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span>I<span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span>VAF<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>WALTLNKIG-YFGF<span class=W1>W</span>SMMLFLF<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span>V<span class=G1>G</span><span class=F1>F</span><span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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78 nad3_recam D-D<span class=A1>A</span><span class=R1>R</span>GA<span class=F1>F</span>DV<span class=R1>R</span><span class=F1>F</span>Y<span class=L1>L</span><span class=V1>V</span><span class=A1>A</span><span class=I1>I</span><span class=L1>L</span><span class=F1>F</span>I<span class=I1>I</span><span class=F1>F</span><span class=D1>D</span><span class=L1>L</span><span class=E1>E</span>VAF<span class=L1>L</span><span class=F1>F</span><span class=P1>P</span>WAVALSDVT-IFGF<span class=W1>W</span>TMFIFLL<span class=I1>I</span><span class=L1>L</span><span class=T1>T</span>V<span class=G1>G</span><span class=F1>F</span><span class=I1>I</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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79 <span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span> <span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span>
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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80
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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81
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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82 130 140 150
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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83 =========+=========+=========+===
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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84 nad3_parde <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>KK<span class=G1>G</span><span class=A1>A</span><span class=L1>L</span>E<span class=W1>W</span>A----------------------
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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85 nad3_acaca <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>QK<span class=G1>G</span><span class=A1>A</span><span class=L1>L</span>E<span class=W1>W</span>D----------------------
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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86 nad3_allma <span class=Y1>Y</span><span class=E1>E</span>FVS<span class=G1>G</span><span class=A1>A</span>ITDSF---------------------
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87 nad3_apec F<span class=E1>E</span><span class=W1>W</span>VQ<span class=G1>G</span>G<span class=L1>L</span>D<span class=W1>W</span>AE---------------------
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88 nad3_arath <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>KR<span class=G1>G</span><span class=A1>A</span>SDRE----------------------
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89 nad3_balca <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>ME<span class=G1>G</span>G<span class=L1>L</span>E<span class=W1>W</span>AE---------------------
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90 nad3_chocr <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>YK<span class=G1>G</span><span class=A1>A</span><span class=L1>L</span>E<span class=W1>W</span>E----------------------
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91 nad3_drome H<span class=E1>E</span><span class=W1>W</span>NQ<span class=G1>G</span>M<span class=L1>L</span>N<span class=W1>W</span>SN---------------------
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92 nad3_human <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>LQKG<span class=L1>L</span>D<span class=W1>W</span>TE---------------------
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93 nad3_ktun H<span class=E1>E</span><span class=W1>W</span>SE<span class=G1>G</span>S<span class=L1>L</span>E<span class=W1>W</span>FSSSN------------------
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94 nad3_lter H<span class=E1>E</span><span class=W1>W</span>KE<span class=G1>G</span>S<span class=L1>L</span>D<span class=W1>W</span>SS---------------------
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95 nad3_marpo <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>KK<span class=G1>G</span><span class=A1>A</span><span class=L1>L</span>D<span class=W1>W</span>E----------------------
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96 nad3_metse <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>LK<span class=G1>G</span>G<span class=L1>L</span>E<span class=W1>W</span>E----------------------
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97 nad3_picca I<span class=E1>E</span>INTK<span class=A1>A</span>IYMTKMFNRNVKSMTSYVKYNNKI--
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98 nad3_podan <span class=Y1>Y</span><span class=E1>E</span>LGKS<span class=A1>A</span><span class=L1>L</span>KIDSRQVITMTRFNYSSTIEYLGKI
daf61c79c8b4 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gblocks commit 2c1d4da58bb81f0b7232a1b3f0b3a0fde752de33
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99 nad3_prowi <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>RK<span class=G1>G</span><span class=A1>A</span><span class=L1>L</span>D<span class=W1>W</span>S----------------------
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100 nad3_recam <span class=Y1>Y</span><span class=E1>E</span><span class=W1>W</span>KK<span class=G1>G</span><span class=A1>A</span><span class=L1>L</span>D<span class=W1>W</span>E----------------------
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101 <span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span><span class=BL>#</span>
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102
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103
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104
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105 </pre>
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106 <pre>
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107
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108
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109 <br><b>Parameters used</b>
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110 Minimum Number Of Sequences For A Conserved Position: 9
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111 Minimum Number Of Sequences For A Flanking Position: 14
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112 Maximum Number Of Contiguous Nonconserved Positions: 8
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113 Minimum Length Of A Block: 10
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114 Allowed Gap Positions: None
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115 Use Similarity Matrices: Yes
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116
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117 </pre><pre><b>Flank positions of the 3 selected block(s)</b>
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118 Flanks: [48 60] [64 91] [114 128]
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119
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120 New number of positions in input.pir-gb: <b> 56 </b> (36% of the original 153 positions)
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121
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122
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123 </body>
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124 </html>