Mercurial > repos > earlhaminst > gstf_preparation
view test-data/Caenorhabditis_elegans.WBcel235.cds.all.shortened.fa @ 7:9ef7661e8e9c draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gstf_preparation commit 79c2cb2362b64134df778cc484e426642eb6895e
| author | earlhaminst |
|---|---|
| date | Wed, 25 Apr 2018 11:06:03 -0400 |
| parents | 28879ca33b5f |
| children |
line wrap: on
line source
>Y74C9A.3 cds chromosome:WBcel235:I:4119:10230:-1 gene:WBGene00022277 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:homt-1 description:Alpha N-terminal protein methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4D9] ATGAGCTCTTCATCATCTTCTAGAATTCACAATGGTGAAGATGTTTATGAAAAGGCGGAG GAATACTGGAGCCGCGCGAGCCAGGACGTCAACGGAATGCTCGGCGGATTCGAAGCGCTT CACGCGCCCGACATATCGGCGTCGAAACGATTTATTGAAGGACTGAAGAAAAAGAATCTA TTCGGCTACTTTGACTATGCACTGGACTGCGGAGCGGGTATCGGACGTGTTACAAAGCAT CTCTTAATGCCATTCTTCTCGAAAGTTGATATGGAAGACGTCGTCGAGGAGTTGATCACG AAAAGTGATCAATATATTGGAAAACATCCACGAATTGGAGATAAATTCGTCGAAGGACTG CAGACGTTTGCACCGCCCGAACGACGTTATGATTTGATATGGATTCAATGGGTTTCAGGG CATTTGGTTGATGAGGATTTGGTTGATTTCTTTAAAAGATGTGCGAAAGGACTGAAACCT GGTGGATGTATTGTGCTCAAGGATAATGTGACAAATCACGAGAAACGGTTATTCGACGAT GATGATCATAGTTGGACGAGAACAGAGCCCGAGCTTCTTAAAGCGTTCGCCGATTCTCAA CTGGACATGGTCTCGAAAGCACTGCAAACCGGATTCCCAAAGGAGATTTATCCAGTAAAA ATGTATGCATTGAAGCCTCAACACACCGGATTCACCAATAATTGA >Y74C9A.2a.1 cds chromosome:WBcel235:I:11618:16842:1 gene:WBGene00022276 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nlp-40 description:Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206] ATGAAACTCGTAATTCTGCTATCTTTTGTTGCGACAGTTGCGGTTTTTGCGGCTCCATCG GCTCCGGCAGGTCTCGAGGAGAAGCTGCGTGCTCTTCAGGAGCAACTGTACAGTCTGGAG AAAGAGAACGGAGTTGATGTGAAGCAAAAGGAGCAACCAGCAGCAGCCGACACATTCCTT GGATTTGTTCCACAGAAGAGAATGGTCGCGTGGCAGCCGATGAAGCGGTCGATGATCAAT GAGGATTCTAGAGCTCCATTGCTCCACGCAATCGAAGCCCGCTTGGCCGAAGTGTTGAGA GCCGGAGAACGCCTCGGAGTCAACCCGGAGGAAGTTTTGGCGGATCTTCGTGCTCGTAAT CAATTCCAATAA >Y74C9A.2a.2 cds chromosome:WBcel235:I:10413:16842:1 gene:WBGene00022276 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nlp-40 description:Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206] ATGAAACTCGTAATTCTGCTATCTTTTGTTGCGACAGTTGCGGTTTTTGCGGCTCCATCG GCTCCGGCAGGTCTCGAGGAGAAGCTGCGTGCTCTTCAGGAGCAACTGTACAGTCTGGAG AAAGAGAACGGAGTTGATGTGAAGCAAAAGGAGCAACCAGCAGCAGCCGACACATTCCTT GGATTTGTTCCACAGAAGAGAATGGTCGCGTGGCAGCCGATGAAGCGGTCGATGATCAAT GAGGATTCTAGAGCTCCATTGCTCCACGCAATCGAAGCCCGCTTGGCCGAAGTGTTGAGA GCCGGAGAACGCCTCGGAGTCAACCCGGAGGAAGTTTTGGCGGATCTTCGTGCTCGTAAT CAATTCCAATAA >Y74C9A.2a.3 cds chromosome:WBcel235:I:11505:16842:1 gene:WBGene00022276 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nlp-40 description:Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206] ATGAAACTCGTAATTCTGCTATCTTTTGTTGCGACAGTTGCGGTTTTTGCGGCTCCATCG GCTCCGGCAGGTCTCGAGGAGAAGCTGCGTGCTCTTCAGGAGCAACTGTACAGTCTGGAG AAAGAGAACGGAGTTGATGTGAAGCAAAAGGAGCAACCAGCAGCAGCCGACACATTCCTT GGATTTGTTCCACAGAAGAGAATGGTCGCGTGGCAGCCGATGAAGCGGTCGATGATCAAT GAGGATTCTAGAGCTCCATTGCTCCACGCAATCGAAGCCCGCTTGGCCGAAGTGTTGAGA GCCGGAGAACGCCTCGGAGTCAACCCGGAGGAAGTTTTGGCGGATCTTCGTGCTCGTAAT CAATTCCAATAA >Y74C9A.2b.1 cds chromosome:WBcel235:I:11499:16842:1 gene:WBGene00022276 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nlp-40 description:Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206] ATGGTCGCGTGGCAGCCGATGAAGCGGTCGATGATCAATGAGGATTCTAGAGCTCCATTG CTCCACGCAATCGAAGCCCGCTTGGCCGAAGTGTTGAGAGCCGGAGAACGCCTCGGAGTC AACCCGGAGGAAGTTTTGGCGGATCTTCGTGCTCGTAATCAATTCCAATAA >Y74C9A.2b.2 cds chromosome:WBcel235:I:11495:16793:1 gene:WBGene00022276 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nlp-40 description:Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206] ATGGTCGCGTGGCAGCCGATGAAGCGGTCGATGATCAATGAGGATTCTAGAGCTCCATTG CTCCACGCAATCGAAGCCCGCTTGGCCGAAGTGTTGAGAGCCGGAGAACGCCTCGGAGTC AACCCGGAGGAAGTTTTGGCGGATCTTCGTGCTCGTAATCAATTCCAATAA >Y74C9A.2b.3 cds chromosome:WBcel235:I:11623:16842:1 gene:WBGene00022276 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nlp-40 description:Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206] ATGGTCGCGTGGCAGCCGATGAAGCGGTCGATGATCAATGAGGATTCTAGAGCTCCATTG CTCCACGCAATCGAAGCCCGCTTGGCCGAAGTGTTGAGAGCCGGAGAACGCCTCGGAGTC AACCCGGAGGAAGTTTTGGCGGATCTTCGTGCTCGTAATCAATTCCAATAA >Y74C9A.2b.4 cds chromosome:WBcel235:I:11499:16842:1 gene:WBGene00022276 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nlp-40 description:Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206] ATGGTCGCGTGGCAGCCGATGAAGCGGTCGATGATCAATGAGGATTCTAGAGCTCCATTG CTCCACGCAATCGAAGCCCGCTTGGCCGAAGTGTTGAGAGCCGGAGAACGCCTCGGAGTC AACCCGGAGGAAGTTTTGGCGGATCTTCGTGCTCGTAATCAATTCCAATAA >Y74C9A.4a cds chromosome:WBcel235:I:17483:26781:-1 gene:WBGene00022278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rcor-1 description:RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207] ATGGATTCGTACACGTCATCTGACGAAGACGCCTCTCGAAAAGAAAACGAAGGCTTGAAT ATGTTGAATGCATCGCCGGAGCCAATGGAGGAAGATGATCCAGAGGAGCAGGCGGAACAA GAAGAAGAAACCAGCAGAATGGCTCGTCCTATAAGATCCATGAGAAAACGCGAAACAACG TCTGGGGAATCAATGGGCGATGAGGATGAAGATTTGGAGGATGAAGAGGACGAAGATGAA GAAGCTGAAGCTCGTGAGCATCATGAAAGTGGTGCTCATGACACATCTTTCTCAAATCCA CTTTCCAACGTCGACAATCTAATCCACGTGGGAACCGAATATCAGGCGATTATACAGCCA ACTGCAGAGCAATTGGAAAAAGAACCGTGCAGAGATCAACAAATTTGGGCGTTTCCAGAC GAAATGAACGAGAATCGGCTTACAGAATACATTTCAGAAGCTACTGGACGATATCAATTA CCTATAGATAGGGCTCTGTTCATTCTGAACAAACAGTCAAATGATTTCGACGCTGCGATG GTTCAAGCGATGAGAAGAAAAGAAATTCATGATGATTGGACGGCAGAAGAAATTAGTCTT TTCTCCACTTGCTTCTTTCATTTCGGAAAACGGTTCAAGAAGATTCATGCGGCTATGCCC CAACGCTCGCTTTCTTCCATTATCCAATACTATTACAACACGAAAAAAGTGCAAAACTAT AAAACAATGATTAATGTGCATTTGAATGAAACCGACACTTATGATGAACTATTCAAAGAG GTCAATCATTTGGAGAGGGTTCCGTCGGGATATTGTGAGAATTGCAATGCAAAAAGTGAT CTGTTGATTCTAAATCGTGTAATGTCGCGTCACGAATGTAAACCGTGTATCCTTTATTTC CGTTTGATGCGTGTTCCACGTCCGGCAAGCCTCCGTGCACTGACAAAACGACGGCAACGA GTTTTATGTCCAGAATACATGAAAATTTATGTATACGGATATCTTGAGCTCATGGAGCCA GCCAACGGAAAAGCGATCAAACGGCTTGGAATTGGAAAAGAAAAAGAAGAAGACGATGAT ATTATGGTGGTCGACGACTGCCTTCTCCGTAAACCATCAGGCCCCTACATTGTGGAGCAA TCGATTGAAGCTGATCCAATCGATGAGAATACGTGCAGAATGACACGGTGCTTCGATACA CCGGCTGCACTGGCATTAATTGATAATATCAAGAGAAAACATCATATGTGTGTTCCACTT GTTTGGAGAGTTAAACAAACGAAATGTATGGAGGAGAACGAAATTCTGAATGAAGAAGCC CGTCAACAAATGTTCCGTGCAACAATGACATACAGCCGTGTACCAAAAGGAGAAATTGCA AATTGGAAGAAAGATATGATGGCGTTGAAGGGAAGATTCGAGAGATTTACTCCTGAACTA GATACTACTGCAACAAATGGCAATCGATCTGGAAAAGTCAGGATAAATTATGGTTGGAGT CCTGAGGAAAAGAAGAATGCTATTAGATGTTTCCACTGGTACAAGGACAATTTCGAGTTG ATCGCCGAGTTGATGGCCACAAAAACTGTGGAACAAATCAAAAAGTTCTATATGGACAAT GAAAAGCTAATTTTGGAGTCAATCGACACGTATCGCGCCGAGCTCAAGTCAAAACTCGGC AAATAA >Y74C9A.4b cds chromosome:WBcel235:I:17483:26778:-1 gene:WBGene00022278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rcor-1 description:RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207] ATGGATTCGTACACGTCATCTGACGAAGACGCCTCTCGAAAAGAAAATATTTCAGACGAA GGCTTGAATATGTTGAATGCATCGCCGGAGCCAATGGAGGAAGATGATCCAGAGGAGCAG GCGGAACAAGAAGAAGAAACCAGCAGAATGGCTCGTCCTATAAGATCCATGAGAAAACGC GAAACAACGTCTGGGGAATCAATGGGCGATGAGGATGAAGATTTGGAGGATGAAGAGGAC GAAGATGAAGAAGCTGAAGCTCGTGAGCATCATGAAAGTGGTGCTCATGACACATCTTTC TCAAATCCACTTTCCAACGTCGACAATCTAATCCACGTGGGAACCGAATATCAGGCGATT ATACAGCCAACTGCAGAGCAATTGGAAAAAGAACCGTGCAGAGATCAACAAATTTGGGCG TTTCCAGACGAAATGAACGAGAATCGGCTTACAGAATACATTTCAGAAGCTACTGGACGA TATCAATTACCTATAGATAGGGCTCTGTTCATTCTGAACAAACAGTCAAATGATTTCGAC GCTGCGATGGTTCAAGCGATGAGAAGAAAAGAAATTCATGATGATTGGACGGCAGAAGAA ATTAGTCTTTTCTCCACTTGCTTCTTTCATTTCGGAAAACGGTTCAAGAAGATTCATGCG GCTATGCCCCAACGCTCGCTTTCTTCCATTATCCAATACTATTACAACACGAAAAAAGTG CAAAACTATAAAACAATGATTAATGTGCATTTGAATGAAACCGACACTTATGATGAACTA TTCAAAGAGGTCAATCATTTGGAGAGGGTTCCGTCGGGATATTGTGAGAATTGCAATGCA AAAAGTGATCTGTTGATTCTAAATCGTGTAATGTCGCGTCACGAATGTAAACCGTGTATC CTTTATTTCCGTTTGATGCGTGTTCCACGTCCGGCAAGCCTCCGTGCACTGACAAAACGA CGGCAACGAGTTTTATGTCCAGAATACATGAAAATTTATGTATACGGATATCTTGAGCTC ATGGAGCCAGCCAACGGAAAAGCGATCAAACGGCTTGGAATTGGAAAAGAAAAAGAAGAA GACGATGATATTATGGTGGTCGACGACTGCCTTCTCCGTAAACCATCAGGCCCCTACATT GTGGAGCAATCGATTGAAGCTGATCCAATCGATGAGAATACGTGCAGAATGACACGGTGC TTCGATACACCGGCTGCACTGGCATTAATTGATAATATCAAGAGAAAACATCATATGTGT GTTCCACTTGTTTGGAGAGTTAAACAAACGAAATGTATGGAGGAGAACGAAATTCTGAAT GAAGAAGCCCGTCAACAAATGTTCCGTGCAACAATGACATACAGCCGTGTACCAAAAGGA GAAATTGCAAATTGGAAGAAAGATATGATGGCGTTGAAGGGAAGATTCGAGAGATTTACT CCTGAACTAGATACTACTGCAACAAATGGCAATCGATCTGGAAAAGTCAGGATAAATTAT GGTTGGAGTCCTGAGGAAAAGAAGAATGCTATTAGATGTTTCCACTGGTACAAGGACAAT TTCGAGTTGATCGCCGAGTTGATGGCCACAAAAACTGTGGAACAAATCAAAAAGTTCTAT ATGGACAATGAAAAGCTAATTTTGGAGTCAATCGACACGTATCGCGCCGAGCTCAAGTCA AAACTCGGCAAATAA >Y74C9A.4c cds chromosome:WBcel235:I:17483:26643:-1 gene:WBGene00022278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rcor-1 description:RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207] ATGGAGGAAGATGATCCAGAGGAGCAGGCGGAACAAGAAGAAGAAACCAGCAGAATGGCT CGTCCTATAAGATCCATGAGAAAACGCGAAACAACGTCTGGGGAATCAATGGGCGATGAG GATGAAGATTTGGAGGATGAAGAGGACGAAGATGAAGAAGCTGAAGCTCGTGAGCATCAT GAAAGTGGTGCTCATGACACATCTTTCTCAAATCCACTTTCCAACGTCGACAATCTAATC CACGTGGGAACCGAATATCAGGCGATTATACAGCCAACTGCAGAGCAATTGGAAAAAGAA CCGTGCAGAGATCAACAAATTTGGGCGTTTCCAGACGAAATGAACGAGAATCGGCTTACA GAATACATTTCAGAAGCTACTGGACGATATCAATTACCTATAGATAGGGCTCTGTTCATT CTGAACAAACAGTCAAATGATTTCGACGCTGCGATGGTTCAAGCGATGAGAAGAAAAGAA ATTCATGATGATTGGACGGCAGAAGAAATTAGTCTTTTCTCCACTTGCTTCTTTCATTTC GGAAAACGGTTCAAGAAGATTCATGCGGCTATGCCCCAACGCTCGCTTTCTTCCATTATC CAATACTATTACAACACGAAAAAAGTGCAAAACTATAAAACAATGATTAATGTGCATTTG AATGAAACCGACACTTATGATGAACTATTCAAAGAGGTCAATCATTTGGAGAGGGTTCCG TCGGGATATTGTGAGAATTGCAATGCAAAAAGTGATCTGTTGATTCTAAATCGTGTAATG TCGCGTCACGAATGTAAACCGTGTATCCTTTATTTCCGTTTGATGCGTGTTCCACGTCCG GCAAGCCTCCGTGCACTGACAAAACGACGGCAACGAGTTTTATGTCCAGAATACATGAAA ATTTATGTATACGGATATCTTGAGCTCATGGAGCCAGCCAACGGAAAAGCGATCAAACGG CTTGGAATTGGAAAAGAAAAAGAAGAAGACGATGATATTATGGTGGTCGACGACTGCCTT CTCCGTAAACCATCAGGCCCCTACATTGTGGAGCAATCGATTGAAGCTGATCCAATCGAT GAGAATACGTGCAGAATGACACGGTGCTTCGATACACCGGCTGCACTGGCATTAATTGAT AATATCAAGAGAAAACATCATATGTGTGTTCCACTTGTTTGGAGAGTTAAACAAACGAAA TGTATGGAGGAGAACGAAATTCTGAATGAAGAAGCCCGTCAACAAATGTTCCGTGCAACA ATGACATACAGCCGTGTACCAAAAGGAGAAATTGCAAATTGGAAGAAAGATATGATGGCG TTGAAGGGAAGATTCGAGAGATTTACTCCTGAACTAGATACTACTGCAACAAATGGCAAT CGATCTGGAAAAGTCAGGATAAATTATGGTTGGAGTCCTGAGGAAAAGAAGAATGCTATT AGATGTTTCCACTGGTACAAGGACAATTTCGAGTTGATCGCCGAGTTGATGGCCACAAAA ACTGTGGAACAAATCAAAAAGTTCTATATGGACAATGAAAAGCTAATTTTGGAGTCAATC GACACGTATCGCGCCGAGCTCAAGTCAAAACTCGGCAAATAA >Y74C9A.4d cds chromosome:WBcel235:I:17483:24796:-1 gene:WBGene00022278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rcor-1 description:RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207] ATGTCGCGTCACGAATGTAAACCGTGTATCCTTTATTTCCGTTTGATGCGTGTTCCACGT CCGGCAAGCCTCCGTGCACTGACAAAACGACGGCAACGAGTTTTATGTCCAGAATACATG AAAATTTATGTATACGGATATCTTGAGCTCATGGAGCCAGCCAACGGAAAAGCGATCAAA CGGCTTGGAATTGGAAAAGAAAAAGAAGAAGACGATGATATTATGGTGGTCGACGACTGC CTTCTCCGTAAACCATCAGGCCCCTACATTGTGGAGCAATCGATTGAAGCTGATCCAATC GATGAGAATACGTGCAGAATGACACGGTGCTTCGATACACCGGCTGCACTGGCATTAATT GATAATATCAAGAGAAAACATCATATGTGTGTTCCACTTGTTTGGAGAGTTAAACAAACG AAATGTATGGAGGAGAACGAAATTCTGAATGAAGAAGCCCGTCAACAAATGTTCCGTGCA ACAATGACATACAGCCGTGTACCAAAAGGAGAAATTGCAAATTGGAAGAAAGATATGATG GCGTTGAAGGGAAGATTCGAGAGATTTACTCCTGAACTAGATACTACTGCAACAAATGGC AATCGATCTGGAAAAGTCAGGATAAATTATGGTTGGAGTCCTGAGGAAAAGAAGAATGCT ATTAGATGTTTCCACTGGTACAAGGACAATTTCGAGTTGATCGCCGAGTTGATGGCCACA AAAACTGTGGAACAAATCAAAAAGTTCTATATGGACAATGAAAAGCTAATTTTGGAGTCA ATCGACACGTATCGCGCCGAGCTCAAGTCAAAACTCGGCAAATAA