Mercurial > repos > earlhaminst > hcluster_sg
comparison hcluster_sg.xml @ 2:176639d514ee draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/hcluster_sg commit f5c5f3d6ce676937f5c673ec7fc0631a9f490dc2
author | earlhaminst |
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date | Fri, 24 Mar 2017 12:32:37 -0400 |
parents | 4a233271d05a |
children | 891cc66ea91b |
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1:09955cea320f | 2:176639d514ee |
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1 <tool id="hcluster_sg" name="hcluster_sg" version="0.5.1"> | 1 <tool id="hcluster_sg" name="hcluster_sg" version="0.5.1"> |
2 <description>Hierarchically clustering on a sparse graph</description> | 2 <description>Hierarchically clustering on a sparse graph</description> |
3 <requirements> | 3 <requirements> |
4 <requirement type="package" version="0.5.1">hcluster_sg</requirement> | 4 <requirement type="package" version="0.5.1">hcluster_sg</requirement> |
5 </requirements> | 5 </requirements> |
6 <command> | 6 <command detect_errors="exit_code"> |
7 <![CDATA[ | 7 <![CDATA[ |
8 hcluster_sg | 8 hcluster_sg |
9 -w $w | 9 -w $w |
10 -s $s | 10 -s $s |
11 -m $m | 11 -m $m |
14 $O.O_selector | 14 $O.O_selector |
15 #if $O.O_selector == '-O' | 15 #if $O.O_selector == '-O' |
16 -r $O.r | 16 -r $O.r |
17 #end if | 17 #end if |
18 #if $C | 18 #if $C |
19 -C $C | 19 -C '$C' |
20 #end if | 20 #end if |
21 -L $L | 21 -L $L |
22 $inputFile | 22 '$inputFile' |
23 > $outputFile | 23 > '$outputFile' |
24 ]]> | 24 ]]> |
25 </command> | 25 </command> |
26 <inputs> | 26 <inputs> |
27 <param name="inputFile" type="data" format="tabular" label="Weight file" help="3-columns format: id-1 id-2 integer-weight" /> | 27 <param name="inputFile" type="data" format="tabular" label="Weight file" help="3-columns format: id-1 id-2 integer-weight" /> |
28 <param name="w" type="integer" min="0" value="20" label="Minimum edge weight" help="(-w)" /> | 28 <param name="w" type="integer" min="0" value="20" label="Minimum edge weight" help="(-w)" /> |