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comparison hcluster_sg.xml @ 2:176639d514ee draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/hcluster_sg commit f5c5f3d6ce676937f5c673ec7fc0631a9f490dc2
author earlhaminst
date Fri, 24 Mar 2017 12:32:37 -0400
parents 4a233271d05a
children 891cc66ea91b
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1:09955cea320f 2:176639d514ee
1 <tool id="hcluster_sg" name="hcluster_sg" version="0.5.1"> 1 <tool id="hcluster_sg" name="hcluster_sg" version="0.5.1">
2 <description>Hierarchically clustering on a sparse graph</description> 2 <description>Hierarchically clustering on a sparse graph</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.5.1">hcluster_sg</requirement> 4 <requirement type="package" version="0.5.1">hcluster_sg</requirement>
5 </requirements> 5 </requirements>
6 <command> 6 <command detect_errors="exit_code">
7 <![CDATA[ 7 <![CDATA[
8 hcluster_sg 8 hcluster_sg
9 -w $w 9 -w $w
10 -s $s 10 -s $s
11 -m $m 11 -m $m
14 $O.O_selector 14 $O.O_selector
15 #if $O.O_selector == '-O' 15 #if $O.O_selector == '-O'
16 -r $O.r 16 -r $O.r
17 #end if 17 #end if
18 #if $C 18 #if $C
19 -C $C 19 -C '$C'
20 #end if 20 #end if
21 -L $L 21 -L $L
22 $inputFile 22 '$inputFile'
23 > $outputFile 23 > '$outputFile'
24 ]]> 24 ]]>
25 </command> 25 </command>
26 <inputs> 26 <inputs>
27 <param name="inputFile" type="data" format="tabular" label="Weight file" help="3-columns format: id-1 id-2 integer-weight" /> 27 <param name="inputFile" type="data" format="tabular" label="Weight file" help="3-columns format: id-1 id-2 integer-weight" />
28 <param name="w" type="integer" min="0" value="20" label="Minimum edge weight" help="(-w)" /> 28 <param name="w" type="integer" min="0" value="20" label="Minimum edge weight" help="(-w)" />