# HG changeset patch # User earlhaminst # Date 1478865370 18000 # Node ID 4a233271d05a2f27c6c65e3622ffe1b42058da04 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/hcluster_sg commit e24b91d3051c422ee2a20caf8bb12f0896e2c84a-dirty diff -r 000000000000 -r 4a233271d05a hcluster_sg.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/hcluster_sg.xml Fri Nov 11 06:56:10 2016 -0500 @@ -0,0 +1,69 @@ + + Hierarchically clustering on a sparse graph + + hcluster_sg + + + $outputFile +]]> + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff -r 000000000000 -r 4a233271d05a test-data/exam-1.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/exam-1.txt Fri Nov 11 06:56:10 2016 -0500 @@ -0,0 +1,5253 @@ +0 1 95 +0 2 92 +1 2 92 +0 3 97 +1 3 95 +2 3 92 +0 4 90 +1 4 85 +2 4 82 +3 4 85 +0 5 95 +1 5 95 +2 5 99 +3 5 97 +4 5 85 +0 6 89 +1 6 87 +2 6 86 +3 6 86 +4 6 79 +5 6 87 +0 7 92 +1 7 93 +2 7 85 +3 7 87 +4 7 82 +5 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46 45,39,71,83,49,61,64,38,25,72,44,29,90,35,30,28,62,65,63,88,89,34,82,73,52,74,17,55,41,56,59,51,32,33,87,31,85,27,48,66,50,37,60,77,26,54, +2 0 0 1.000 0 1 84, +3 0 33 1.000 0 8 101,96,92,98,94,100,91,99, +4 0 28 1.000 0 4 40,43,76,42, +5 0 0 1.000 0 1 8, +6 0 54 1.000 0 8 18,23,21,15,22,20,14,16, +7 0 15 0.596 0 17 24,95,58,69,78,36,68,70,57,67,97,79,53,47,75,86,46, +8 0 0 1.000 0 1 102, diff -r 000000000000 -r 4a233271d05a test-data/hcluster_sg2.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/hcluster_sg2.txt Fri Nov 11 06:56:10 2016 -0500 @@ -0,0 +1,5 @@ +0 99 0,13,39,84,83,96,101,100,99,98,76,43,8,42,40,14,24,86,97,95,102,79,78,75,70,69,68,67,58,57,53,47,46,36,23,22,21,20,18,16,15,94,92,91,90,89,88,87,85,73,41,38,33,27,26,25,17,82,77,74,72,71,66,65,64,63,62,61,60,59,56,55,54,52,51,50,49,48,45,44,34,32,31,37,35,30,29,28,12,11,10,9,7,6,5,4,3,2,1, +1 1 19, +2 1 80, +3 1 81, +4 1 93, diff -r 000000000000 -r 4a233271d05a tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri Nov 11 06:56:10 2016 -0500 @@ -0,0 +1,22 @@ + + + + + + git clone https://github.com/douglasgscofield/hcluster.git hcluster_sg + make + $INSTALL_DIR/bin + + hcluster_sg + $INSTALL_DIR/bin/ + + + $INSTALL_DIR/bin + + + + +hcluster_sg is tool for hierarchically clustering on a sparse graph. + + +