Mercurial > repos > earlhaminst > replace_chromosome_names

diff replace_chromosome_names.xml @ 1:6c0373cc070f draft default tip

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/replace_chromosome_names/ commit c8418d1d7657dacae7f81fe4aa0aba051873d4ad
author earlhaminst
date Tue, 13 Jun 2017 14:43:07 -0400
parents 97c11d04cd4c
children
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--- a/replace_chromosome_names.xml	Thu May 18 14:17:48 2017 -0400
+++ b/replace_chromosome_names.xml	Tue Jun 13 14:43:07 2017 -0400
@@ -28,6 +28,9 @@
             <param name="mapping" ftype="tabular" value="GRCh37_ensembl2UCSC.txt" />
             <param name="comment_char" value="#" />
             <output name="output" ftype="vcf" file="replace_chromosome_names_output.vcf" />
+            <assert_stderr>
+                <has_text text="HG1007_PATCH" />
+            </assert_stderr>
         </test>
     </tests>
     <help><![CDATA[