Mercurial > repos > earlhaminst > smina
annotate test-data/output_smina @ 0:7c0bb0c48a27 draft default tip
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
author | earlhaminst |
---|---|
date | Tue, 08 May 2018 19:08:15 -0400 |
parents | |
children |
rev | line source |
---|---|
0
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
1 _______ _______ _________ _ _______ |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
2 ( ____ \( )\__ __/( ( /|( ___ ) |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
3 | ( \/| () () | ) ( | \ ( || ( ) | |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
4 | (_____ | || || | | | | \ | || (___) | |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
5 (_____ )| |(_)| | | | | (\ \) || ___ | |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
6 ) || | | | | | | | \ || ( ) | |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
7 /\____) || ) ( |___) (___| ) \ || ) ( | |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
8 \_______)|/ \|\_______/|/ )_)|/ \| |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
9 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
10 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
11 smina is based off AutoDock Vina. Please cite appropriately. |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
12 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
13 Weights Terms |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
14 -0.035579 gauss(o=0,_w=0.5,_c=8) |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
15 -0.005156 gauss(o=3,_w=2,_c=8) |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
16 0.840245 repulsion(o=0,_c=8) |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
17 -0.035069 hydrophobic(g=0.5,_b=1.5,_c=8) |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
18 -0.587439 non_dir_h_bond(g=-0.7,_b=0,_c=8) |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
19 1.923 num_tors_div |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
20 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
21 Using random seed: 1000 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
22 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
23 mode | affinity | dist from best mode |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
24 | (kcal/mol) | rmsd l.b.| rmsd u.b. |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
25 -----+------------+----------+---------- |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
26 1 -10.9 0.000 0.000 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
27 2 -10.8 2.596 3.684 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
28 3 -10.5 2.869 4.597 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
29 4 -10.4 2.255 3.321 |
7c0bb0c48a27
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smina/ commit b0a69750ca69548162f9b660eb45fc70c1e4f319-dirty
earlhaminst
parents:
diff
changeset
|
30 5 -10.1 2.651 3.907 |