Mercurial > repos > earlhaminst > t_coffee
diff test-data/output3.phylip @ 8:ae69d14b6fbf draft default tip
"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/t_coffee commit 28bbc172f28d9fbe7ed2795043ff61d9e0642d13"
| author | earlhaminst |
|---|---|
| date | Thu, 14 Jan 2021 12:14:52 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output3.phylip Thu Jan 14 12:14:52 2021 +0000 @@ -0,0 +1,429 @@ + 5 4240 +ENSMUST000 ATGGG-CTTC GGGAGAGGAT GTGAGACGAC GG-----CTG TGCCATTGCT GGTGGCCGTG +ENSCAFT000 ATGGCAGT-- -GCCCAGT-- CTGTGCCCAT GG-GTCGC-A TGC--CTGCT GGTGATCCTC +ENSMUST000 ATGAA-GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG--GGGCT CGTGTTTCTC +ENSRNOT000 ATGAA-GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG--GGGCT CGTGTTTCTC +ENSPTRT000 ATGAA-GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG--GGGCT CCTGTTTCTC + + GCCGCGTTGC TGGTGGGCAC AGCCGGCCAC CTGTACCCTG GAGAGG--TG TG-CCCTGGT + CTCTCCTTGG GATTTGGCCT GGAC------ ------ACAC TAGAGG--TG TG-CCCCAGC + TCCGCCGCGC TC-TCTCTCT GGCCGA---C -----GAGTG GAGAAATCTG TGGGCCCGGC + TCCGCCGCGC TC-TCGCTCT GGCCGA---C -----GAGTG GAGAAATTTG TGGGCCCGGC + TCCGCCGCGC TC-TCGCTCT GGCCGA---C -----GAGTG GAGAAATCTG CGGGCCAGGC + + ATGGACATCC GGAACAACC- TGACCAGGCT ACATGAGCTG GAGAACTGCT CAGTCATTGA + CTGGACATCC GCTCAGAGGT GGCGG-AGCT GCGCCGGCTG GAGAACTGCA GCGTGGTGGA + ATTGACATCC GCAACGACTA TCAGC-AGCT GAAGCGCCTG GAAAACTGCA CGGTGATCGA + ATTGACATCC GCAACGACTA TCAGC-AGCT GAAGCGCCTG GAAAACTGCA CGGTGATCGA + ATCGACATCC GCAACGACTA TCAGC-AGCT GAAGCGCCTG GAGAACTGCA CGGTGATCGA + + GGGCCATCTG CAGATCCTCC TGATGTTCAA GACCAGACCC GAAGATTTCC GAGACCTCAG + GGGCCATCTG CAGATCCTGC TCATGTTCAC GGCCACGGGC GAGGACTTCC GCGGCCTCAG + GGGCTTCCTC CACATCCTGC TCATCTCCAA GG------CC GAGGACTACC GAAGCTACCG + GGGCTTCCTC CACATCCTGC TCATCTCCAA GG------CC GAGGACTACC GAAGCTACCG + GGGCTACCTC CACATCCTGC TCATCTCCAA GG------CC GAGGACTACC GCAGCTACCG + + TTTCCCCAAA CTCATCATGA TCACAGATTA CCTGCTTCTC TTCCGTGTCT ATGGTCTGGA + CTTCCCGCGC CTCACTCAGG TCACTGACTA CCTGCTGCTC TTCCGCGTGT ATGGCCTGGA + CTTCCCCAAG CTCACCGTCA TCACTGAGTA CTTGCTGCTC TTCCGAGTCG CTGGCCTCGA + CTTCCCCAAG CTCACGGTCA TCACCGAGTA CTTGCTGCTG TTTCGAGTGG CCGGCCTCGA + CTTCCCCAAG CTCACGGTCA TTACCGAGTA CTTGCTGCTG TTCCGAGTGG CTGGCCTCGA + + AAGTCTGAAA GACCTCTTCC CAAATCTCAC AGTCATCCGA GGCTCCCGTC TCTTCTTCAA + GAGCCTGCGG GACCTCTTCC CCAACCTCGC GGTCGTGCGT GGCGCCCGCC TCTTCCTGGG + GAGCCTGGGA GACCTCTTCC CCAACCTCAC AGTCATCCGT GGCTGGAAAC TCTTCTACAA + GAGCCTGGGA GACCTCTTCC CGAACCTCAC AGTCATCCGT GGCTGGAAAC TCTTCTACAA + GAGCCTCGGA GACCTCTTCC CCAACCTCAC GGTCATCCGC GGCTGGAAAC TCTTCTACAA + + CTATGCCCTG GTTATCTTCG AGATGGTCCA CCTGAAGGAG CTGGGGCTTT ATAACCTCAT + TTATGCGCTG GTGGTCTACG AGATGCCGCA CCTGCGGGAC GTGGGGCTGC CGGCGCTGGG + CTACGCACTG GTCATCTTCG AGATGACCAA TCTCAAGGAT ATTGGGCTTT ATAATCTGAG + TTACGCACTG GTCATCTTCG AGATGACCAA TCTCAAGGAT ATTGGGCTTT ATAATCTGAG + CTACGCCCTG GTCATCTTCG AGATGACCAA TCTCAAGGAT ATTGGGCTTT ACAACCTGAG + + GAACATCACC CGGGGCTCTG TCCGCATCGA GAAGAATAAT GAGCTCTGCT ACCTGGCCAC + GGCCGTGCTG CGTGGGGCCG TGCGGGTGGA GAAGAACCAG GAGCTCTGTC ATCTCTCCAC + GAACATTACT CGGGGGGCCA TCAGGATTGA GAAGAACGCC GACCTCTGTT ACCTCTCCAC + GAACATTACT CGGGGGGCCA TCAGGATTGA GAAAAACGCT GACCTCTGTT ACCTCTCCAC + GAACATTACT CGGGGGGCCA TCAGGATTGA GAAAAATGCT GACCTCTGTT ACCTCTCCAC + + TATCGACTGG TCCCGTATCC TGGATTCTGT GGAGGACAAC TACATTGTAC TGAACAAAGA + CATCGACTGG GGGCTGCTGC AGCCCTCGCC CAGCGCCAAC CACATCGTGG GCAACAA-GC + CATAGACTGG TCTCTCATCT TGGATGCGGT GTCCAATAAC TACATTGTGG GGAACAA-GC + CATAGACTGG TCTCTCATCT TGGATGCGGT GTCCAATAAC TACATTGTGG GGAACAA-GC + TGTGGACTGG TCCCTGATCC TGGATGCGGT GTCCAATAAC TACATTGTGG GGAATAA-GC + + TGACAACGAG GAATGTGGGG ATGTCTGTCC AGGCACCGCC AAGGGCA-AG ACCAA--CTG + TGCGT--GAG GAGTGTGCCG ACGTGTGCCC TGGTGTGCTG GGTGCCACCG GCCAGCCCTG + CCCCG--AAG GAATGTGGGG ACCTGTGTCC AGGGACATTG GAGGAGA-AG CCCAT--GTG + CCCCA--AAG GAATGTGGGG ACCTGTGTCC AGGGACCTTG GAGGAGA-AG CCCAT--GTG + CCCCA--AAG GAATGTGGGG ACCTGTGTCC AGGGACCATG GAGGAGA-AG CCGAT--GTG + + TCCTGCCACT GTCATCAATG GGCAGTTTGT GGAACGGTGC TGGACACACA GTCATTGTCA + CGCCAGGACC ACCTTCAGTG GGCACACCGA CTACAGATGC TGGACCTCCA GCCACTGCCA + TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA ATCGCTGCCA + TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA ATCGCTGCCA + TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA ACCGCTGCCA + + GAAAGTTTGC CCAACCATCT GTAAGTCACA TGGCTGCACA GCTGAAGGCC TGTGCTGCCA + GAGAGTGTGT CCCTGCCCCC ATGGG---CT GGCCTGCACA GCTGGGGGTG AGTGCTGCCA + GAAAATGTGC CCAAGTGTGT GCGGGAAGCG AGCCTGCACC GAGAACAACG AGTGCTGCCA + GAAAATGTGC CCAAGTGTGT GTGGGAAGCG AGCCTGCACC GAGAACAATG AGTGCTGCCA + GAAAATGTGC CCGAGCACGT GTGGGAAGCG GGCGTGCACC GAGAACAACG AGTGCTGCCA + + CAAAGAGTGC CTGGGCAACT GTTCGGAACC TGATGACCCC ACCAAGTGTG TGGCCTGTCG + CACTGAATGC CTGGGGGGCT GCAGCCGGCC GGAAGACCCC CGCGCCTGCG TCGCCTGTCG + CCCGGAGTGC CTGGGCAGCT GCCACACACC GGACGACAAC ACAACCTGCG TGGCCTGCAG + CCCGGAGTGC CTAGGCAGCT GCCACACACC GGACGACAAC ACAACCTGCG TGGCCTGCCG + CCCCGAGTGC CTGGGCAGCT GCAGCGCGCC TGACAACGAC ACGGCCTGTG TAGCTTGCCG + + CAACTTCTAT CTGGATGGTC AGTGTGTGGA GACCTGCCCG CCACCCTACT ATCACTTCCA + CCACCTCTAC TTCCAGGGTG CCTGCCACCG GGCCTGCCCT CCAGGCACCT ACCAGCACGA + ACACTACTAC TACAAAGGCG TGTGTGTGCC TGCCTGCCCG CCTGGCACCT ACAGGTTCGA + ACACTACTAC TACAAAGGCG TGTGCGTGCC TGCCTGCCCG CCTGGCACCT ACAGGTTCGA + CCACTACTAC TATGCCGGTG TCTGTGTGCC TGCCTGCCCG CCCAACACCT ACAGGTTTGA + + GGACTGGCGC TGTGTGAACT TCAGCTTCTG --CCAAGACC TTCA-CTTCA AATGCAGGAA + GTCCTGGCGC TGTGTCACGG CAGAGCGCTG TGCCAGCCTG CG---CTCTG TGCCCGGCCG + GGGCTGGCGC TGTGTGGATC GCGATTTCTG CGCCAACATC CCCAACGCTG AGAGCAGTGA + GGGCTGGCGC TGTGTGGACC GGGATTTCTG CGCCAACATC CCCAACGCCG AGAGCAGTGA + GGGCTGGCGC TGTGTGGACC GTGACTTCTG CGCCAACATC CTCAGCGCCG AGAGCAGCGA + + CTCTCGGAAG CCTGGCTGCC ACCAATACGT CATTCACAAC AATAAGTGCA TCCCCGAGTG + CAC------- --------CT CCATCTTTGG CATCCACGAG GGCAGCTGCC TGGCCCAGTG + CTC------- --------GG ATGGCTTCGT TATCCACGAC GATGAGTGCA TGCAGGAGTG + CTC------- --------AG ATGGCTTCGT CATCCACGAT GGCGAGTGCA TGCAGGAGTG + CTC------- --------CG AGGGGTTTGT GATCCACGAC GGCGAGTGCA TGCAGGAGTG + + CCCGTCTGGC TATACCATGA ATTCCAGC-- -AACTTGATG TGCACCCCAT GTCTGGGACC + CCCTCCGGGC TTCACCCGCA ACGGCAGC-- -AGCATGTTC TGCCACAAGT GTGAGGGGCT + TCCCTCAGGC TTCATCCGCA ACAGCACCCA GAGCATGTAC TGTATCCCCT GCGAAGGCCC + TCCATCAGGC TTCATCCGCA ACAGCACCCA GAGCATGTAC TGTATCCCCT GTGAAGGCCC + CCCCTCGGGC TTCATCCGCA ACGGCAGCCA GAGCATGTAC TGCATCCCTT GTGAAGGTCC + + CTGCCCTAAG GTCTGCCAA- ATCCTC-GAA GGTG-AGAAG ACCATTGATT CTGTGACATC + GTGCCCCAAA GAGTGCA--- AGGT------ GGGTACCAAG ACCATCGACT CCACGCAGGC + CTGCCCCAAA GTCTGCGGCG ATGAAGAGAA GAAAACGAAA ACCATCGATT CGGTGACTTC + CTGCCCCAAG GTCTGCGGCG ATGAAGAAAA GAAAACGAAA ACCATCGATT CTGTGACGTC + TTGCCCGAAG GTCTGTG--- AGGAAGAAAA GAAAACAAAG ACCATTGATT CTGTTACTTC + + TGCCCAGGAG CTCCGAGGCT GCACTGTGAT CAACGGTAGC CTGATCATCA ACATCCGAGG + GGCACAGGAC CTGGCGGGCT GCACCCACGT GGAGGGGAGC CTCATCATCA ACCTCCGCCA + TGCTCAAATG CTCCAAGGAT GCACCATCCT GAAGGGCAAT CTGCTTATTA ACATCCGGAG + TGCCCAGATG CTCCAAGGGT GCACCATTTT GAAGGGCAAT CTGCTTATTA ACATCCGGCG + TGCTCAGATG CTCCAAGGAT GCACCATCTT CAAGGGCAAT TTGCTCATTA ACATCCGACG + + GGGCAACAAC CTGGCAGCTG AGCTGGAGGC TAACCTTGGC CTCATTGAAG AAATTTCGGG + GGGCTACAAC CTAGAGCTGG AGCTGCAACA GAGCCTGGGG CTGATAGAGA CCATCACTGG + AGGCAATAAC ATTGCCTCGG AGTTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACCGG + AGGCAATAAC ATTGCCTCGG AATTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACTGG + GGGGAATAAC ATTGCTTCAG AGCTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACGGG + + ATTTCTAAAG ATCCGCCGCT CCTATGCTCT GGTATCACTT TCTTTCTTCA GGAAGCTACA + CTTCCTCAAG ATCAAGCACT CCTTTGCCCT CGTGTCCCTG GGCTTTTTCA AGAACCTCAA + CTACGTGAAG ATCCGCCATT CTCATGCCTT GGTCTCCTTG TCCTTCCTGA AGAACCTTCG + CTACGTGAAG ATCCGCCATT CCCATGCCTT GGTCTCCTTG TCCTTCCTGA AGAACCTTCG + CTACGTGAAG ATCCGCCATT CTCATGCCTT GGTCTCCTTG TCCTTCCTAA AAAACCTTCG + + TCTGATTCGA GGAGAGACCT TGGAAATTGG GAACTATTCT TTTTATGCCT TGGACAACCA + ACTCATCCGA GGGGACGCCA TGGTGGATGG GAACTACACC CTGTATGTGC TGGACAACCA + TCTCATCTTA GGAGAGGAGC AGCTGGAAGG GAACTACTCC TTCTATGTCC TAGACAACCA + TCTCATCTTA GGAGAGGAGC AGCTAGAAGG GAACTACTCC TTCTATGTCC TGGACAACCA + CCTCATCTTA GGAGAGGAGC AGCTAGAAGG GAATTACTCC TTCTACGTCC TCGACAACCA + + GAACCTGAGG CAACTCTGGG ACTGGAG-CA AACACAACCT CACCATCACT CAGGGCAAGC + GAACCTACAG CAGCTGGGGG CCTGGGTGGC TGCGG-GGCT CACCATTCCC GTGGGCAAGA + GAACTTGCAG CAGCTGTGGG ACTGGAA-CC ACCGGAACCT GACCGTCAGG TCCGGAAAGA + GAACTTGCAG CAGCTGTGGG ACTGGAA-CC ACCGGAACCT GACCGTCAGG TCAGGGAAAA + GAACTTGCAG CAACTATGGG ACTGGGA-CC ACCGCAACCT GACCATCAAA GCAGGGAAAA + + TCTTCTTCCA TTACAACCCG AAACTCTGCT TGTCTGAAAT TCACAAGATG GAAGAAGTCT + TATACTTCGC TTTCAACCCT CGCCTCTGCT TGGAGCACAT CTACCGCCTG GAAGAGGTGA + TGTACTTTGC TTTCAATCCC AAGCTGTGTG TCTCCGAAAT TTACCGCATG GAGGAAGTGA + TGTACTTCGC TTTCAATCCC AAGCTGTGTG TCTCTGAAAT TTACCGGATG GAGGAGGTGA + TGTACTTTGC TTTCAATCCC AAATTATGTG TTTCCGAAAT TTACCGCATG GAGGAAGTGA + + CCGGAACTAA GGGCCGTCAG GAGAGGAACG ACATTGCCCT GAAGACCAAT GGGGACCAGG + CCGGCACGCG GGGACGGCAA AACAAGGCTG AGATCAACCC CCGCACCAAC GGAGACCGCG + CCGGAACCAA GGGACGCCAG AGCAAAGGGG ACATAAACAC CAGGAACAAC GGAGAGCGAG + CAGGAACAAA GGGACGGCAG AGCAAAGGAG ACATAAACAC CAGGAACAAC GGAGAGCGAG + CGGGGACTAA AGGGCGCCAA AGCAAAGGGG ACATAAACAC CAGGAACAAC GGGGAGAGAG + + CATCGTGTGA AAATGAATTG CTTAAATTTT CTTTCATTCG GACATCTTTT GACAAGATCC + CCGCCTGCCA AACTCGCACC CTGCGCTTCG TGTCCAACGT GACGCAAGCT GACAGCATCT + CTTCCTGTGA AAGTGATGTT CTCCGTTTCA CCTCCACCAC GACCTGGAAG AACCGAATCA + CTTCCTGTGA AAGTGATGTT CTCCGTTTCA CCTCCACCAC CACCTGGAAG AACCGCATCA + CCTCCTGTGA AAGTGACGTC CTGCATTTCA CCTCCACCAC CACGTCGAAG AATCGCATCA + + TGTTGAGGTG GGAACCCTAC TGGCCCCCCG ACTTCCGAGA TCTCCTGGGA TTCATGTTGT + TGCTGCGCTG GGAGCGCTAC GAGCCGCTGG AGGCTCGGGA CCTGCTCAGC TTCATCGTGT + TCATAACGTG GCACCGGTAC CGGCCGCCGG ACTACCGGGA TCTCATCAGC TTCACAGTTT + TCATAACGTG GCACCGGTAC CGGCCGCCGG ACTACCGGGA TCTCATCAGT TTCACAGTCT + TCATAACCTG GCACCGGTAC CGGCCCCCTG ACTACAGGGA TCTCATCAGC TTCACCGTTT + + TCTACAAAGA GGCCCCTTAT CAGAATGTGA CAGAGTTTGA TGGGCAGGAT GCTTGTGGCT + ACTACAAGGA GTCCCCATTC CAGAATGCCA CAGAGCACAC AGGTCCAGAT GCCTGTGGAA + ACTACAAGGA GGCACCATTT AAAAACGTTA CGGAATATGA CGGGCAGGAT GCCTGTGGCT + ACTACAAGGA GGCACCCTTT AAAAACGTCA CGGAATACGA CGGGCAGGAT GCCTGTGGCT + ACTACAAGGA AGCACCCTTT AAGAATGTCA CGGAGTATGA TGGGCAGGAC GCCTGCGGCT + + CCAACAGCTG GACTGTGGTG GATATTGACC CGCCCCAGAG GTCCAACGAC CCCAAGTCTC + CCCAGAGCTG GAACCTGCTG GATGTGGAGC TGCCCTTAAG ---CCGCACC C--------A + CCAACAGCTG GAACATGGTG GATGTAGACC TGCCTCCGAA ---CAAGGAG G--------G + CCAACAGCTG GAACATGGTG GACGTGGACC TGCCTCCGAA ---CAAGGAG G--------G + CCAACAGCTG GAACATGGTG GACGTGGACC TCCCGCCCAA ---CAAGGAC G--------T + + AGACCCCAAG CCACCCTGGG TGGCTGAT-G CGGGGCCTCA AACCCTGGAC CCAATACGCC + AGAACC---- -----CGGGG T-AACTCTAG CA-CCCCTCA AGCCCTGGAC ACAATATGCA + CGAGCC---- -----TGGCA T-TTTACT-G CATGGGCTGA AGCCCTGGAC CCAGTATGCT + GGAGCC---- -----TGGCA T-TTTGCT-G CATGGGCTGA AGCCCTGGAC CCAGTATGCA + GGAGCC---- -----CGGCA T-CTTACT-A CATGGGCTGA AGCCCTGGAC TCAGTACGCC + + ATCTTTGTGA AGACCTTGG- --TTACCTTC TCTGATGAAC GGC-GGACCT ATGGAGCCAA + GTGTTTGTAC GGGCCATCAC ACTGACCACT G-CTGAGGAC AGCCCCCACC AAGGAGCCCA + GTCTATGTCA AGGCTGTGAC CCTCACCATG G-TGGAAAAC GACCATATCC GTGGGGCCAA + GTCTATGTCA AGGCTGTGAC CCTCACCATG G-TGGAAAAC GACCACATCC GTGGGGCCAA + GTTTACGTCA AGGCTGTGAC CCTCACCATG G-TGGAGAAT GACCATATCC GTGGGGCCAA + + AAGTGATATC ATCTATGTGC AAACAGATGC CACTAATCCT TCTGTCCCCC TGGATCCCAT + GAGCCCCATC GTCTACCTCC GAACCCTGCC TGCGGCGCCC ACTGTGCCCC AGGACGTCAT + AAGTGAAATC TTGTACATTC GCACCAATGC TTCAGTCCCT TCCATTCCCC TAGATGTCCT + AAGTGAAATC TTGTACATTC GCACCAACGC TTCAGTTCCT TCCATTCCTC TAGATGTCCT + GAGTGAGATC TTGTACATTC GCACCAATGC TTCAGTTCCT TCCATTCCCT TGGACGTTCT + + ATCAGTTTCT AATTCCTCAT CTCAGATTAT CTTAAAGTGG AAGCCCCCCT CTGACCCCAA + CTCCACGTCC AATTCCTCGT CCCACCTGCT CGTGCGCTGG AAGCCACCGA TTCAGCGCAA + CTCAGCATCA AACTCTTCCT CTCAGCTGAT TGTGAAGTGG AATCCTCCAA CTCTGCCCAA + CTCGGCATCA AACTCCTCCT CTCAGCTGAT CGTGAAGTGG AACCCCCCAA CTCTGCCCAA + TTCAGCATCG AACTCCTCTT CTCAGTTAAT CGTGAAGTGG AACCCTCCCT CTCTGCCCAA + + TGGCAACATC ACACACTACC TGGTGTACTG GGAGAGGCAA GCAGAGGACA GCGAGCTGTT + CGGGAACATC ACCTACTACC TGGTGCTGTG GCAGCGTCTG GCGGAGGACG GCGACCTCTA + TGGTAACTTG AGTTACTACA TTGTGAGGTG GCAGCGGCAG CCCCAGGATG GTTACCTGTA + TGGTAACTTG AGTTACTACA TTGTGAGGTG GCAGCGGCAG CCGCAGGATG GCTATCTGTT + CGGCAACCTG AGTTACTACA TTGTGCGCTG GCAGCGGCAG CCTCAGGACG GCTACCTTTA + + TGAGCTGGAT TATTGTCTCA AAGGGCTGA- AGCTCCCTTC ACGGACCTGG TC---CCCAC + TCTCAACGAC TACTGCCACC GCGGCCTGCG GCTGCCCACC AGCAACAACG AC---CCGC- + CCGGCACAAC TACTGCTCCA AAGA-CAA-- AATACCCATC AGAAAGTACG CCGATGGTA- + CCGGCACAAC TACTGCTCCA AAGA-CAA-- AATACCCATC AGAAAGTACG CCGATGGTA- + CCGGCACAAT TACTGCTCCA AAGA-CAA-- AATCCCCATC AGGAAGTATG CCGACGGCA- + + CCTTTGAGTC TGATGAT-T- -CTCAGAAGC ACAA-TCAGA -GT-GAGTA- TGACGACTCG + GCTTCGACCG CGAGGA---- -CGGTGAACT CGAAG-CCGA GATGGAGCC- -GG-GCTGC- + CCATCGACGT GGAGGAGGTG ACGGAAAATC CCAAGACAGA AGT-GTGTGG TGGTGATAA- + CCATCGATGT GGAGGAGGTG ACAGAAAATC CCAAGACAGA AGT-GTGCGG TGGTGATAA- + CCATCGACAT TGAGGAGGTC ACAGAGAACC CCAAGACTGA GGT-GTGTGG TGGGGAGAA- + + GCCAGTGAGT GC-TGCTCAT GCCC-TAAGA CTGACTCTCA GATCCTGAAG GAGCTGGAGG + ---TGCCCTT GCCAGCACCC ACCGCCTGGG CAG--GTCCT GCCGCCGCTG GAGGCGCAAG + --AGGGCCAT GC-TGCGCTT GCCC-TAAAA CTGAAGCTGA GAAGCAGGCT GAGAAGGAGG + --AGGGCCGT GC-TGTGCCT GTCC-TAAAA CCGAAGCTGA GAAGCAGGCT GAGAAGGAGG + --AGGGCCTT GC-TGCGCCT GCCC-CAAAA CTGAAGCCGA GAAGCAGGCC GAGAAGGAGG + + AGTCTTCATT CAGGAAGACC TTCGAGGATT ACCTGCACAA CGTGGTTTTT GTCCCCAGGC + AGGCCTCGTT CCAGAAGAAG TTCGAAAACT TCCTGCACAA CGCCATCACC ATCCCCAAGT + AGGCTGAGTA CCGTAAAGTC TTTGAGAATT TCCTTCACAA TTCCATCTTT GTGCCCAGGC + AGGCTGAGTA CCGTAAAGTC TTTGAGAATT TCCTTCACAA CTCCATCTTT GTGCCCAGAC + AGGCTGAATA CCGCAAAGTC TTTGAGAATT TCCTGCACAA CTCCATCTTC GTGCCCAGAC + + CATCCCGAAA GCGAAGATCC CTTGAAGAGG TGGGGAATGT GACA---GCC ACCACACTCA + CCCCCTGGAA GGTGACGTCC GTCA-ATAAG AGCCCTCAAA GA-------C ATGCGG-GGA + CCGAAAGGAG GCGGAGAGAC GTCATGCAAG TGGCCAACAC GACCATGTCC AGCCGAAGCA + CTGAGAGGAG GCGGAGAGAT GTCCTGCAGG TGGCTAACAC CACCATGTCC AGCCGAAGCA + CTGAAAGGAA GCGGAGAGAT GTCATGCAAG TGGCCAACAC CACCATGTCC AGCCGAAGCA + + -CACTTCCAG ATTTCCCCAA CGT-CTCCTC TACCATTGTG CCC-ACAAGT CAG-G-AGGA + GGCACCGCCG GGC-GGCCGG GGCGCTCC-- -GGCTTGGGG GC--AACAGC TCG-----GA + GGAACACCAC GGT-AGCTGA CAC-CTACAA TATCACAGAC CCGGAGGAGT TCGAGACAGA + GGAACACCAC GGT-AGCTGA CAC-CTACAA TATCACAGAC CCGGAAGAGT TCGAGACAGA + GGAACACCAC GGC-CGCAGA CAC-CTACAA CATCACCGAC CCGGAAGAGC TGGAGACAGA + + GCACAGGCCA TTTGAGA--- AAGTGGTGAA CAAGGAGTCA CTTGTCATCT CTGGCCTGAG + TTTCGAGATC CAGGAGGACA AAGTGC---C CCGGGAGCGA GCAGTGTTGA GTGGTCTGCG + GTACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGG ACTGTCATCT CCAACCTCCG + ATACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGG ACTGTCATTT CCAACCTCCG + GTACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGA ACTGTGATTT CTAACCTTCG + + ACACTTCACT GGGTACCGCA TTGAGCTGCA GGCATGCAAT CAAGATTCCC CAGAT-GAGA + CCACTTTACG GAATATCGTA TCGACATCCA CGCCTGCAAC CACGCGGCT- CACACCGTGG + GCCTTTCACT CTGTACCGCA TCGATATCCA CAGCTGCAAC CACGAGGCT- GAGAAGCTGG + GCCTTTCACT CTGTACCGTA TCGATATCCA CAGCTGCAAC CACGAGGCT- GAGAAGCTGG + GCCTTTCACA TTGTACCGCA TCGATATCCA CAGCTGCAAC CACGAGGCT- GAGAAGCTGG + + GGTGCAGTGT GGCTGCCTAC GTCAGTGCCC GGACCATGCC TGAAGCTAAG GCAGATGACA + GCTGCAGCGC GGCCACGTTC GTCTTCGCGC GCACCATGCC GCACAGAGAA GCTGATGGCA + GCTGCAGCGC CTCCAACTTC GTCTTTGCGA GAACCATGCC AGCAGAAGGA GCAGATGATA + GCTGCAGCGC CTCCAACTTT GTCTTTGCAA GAACCATGCC AGCAGAAGGA GCAGATGACA + GCTGCAGCGC CTCCAACTTT GTCTTTGCAA GGACTATGCC CGCAGAAGGA GCAGATGACA + + TCGTTGGCCC TGTGACTCAT GAA---ATCT TTGAGAACAA TGTTGTACAC TTAATGTGGC + TCCCAGGGAA GGTGGCCTGG GAGGCAGCCA GCAAAAGC-- -AGTGTCCTC CTGCGCTGGC + TCCCTGGTCC GGTGACCTGG GAGCCAAGAC CCGAAAAC-- -TCCATCTTT TTAAAGTGGC + TTCCTGGCCC AGTGACCTGG GAGCCAAGAC CTGAAAAC-- -TCCATCTTT TTAAAGTGGC + TTCCTGGGCC AGTGACCTGG GAGCCAAGGC CTGAAAAC-- -TCCATCTTT TTAAAGTGGC + + AAGAGCCAAA GGAACCTAAT GGTCTGATTG TGCTATATGA AGTGAGCTAT CGCCGATATG + TGGAGCCACC TGACCCCAAC GGACTCATCC TCAAGTATGA AATCAAGTAC CGCCGCTTGG + CAGAACCCGA GAACCCCAAC GGATTGATCC TAATGTATGA AATTAAATAC GGGTCGCAA- + CAGAACCCGA GAACCCCAAC GGATTGATTC TAATGTATGA AATAAAATAC GGATCGCAA- + CGGAACCTGA GAATCCCAAT GGATTGATTC TAATGTATGA AATAAAATAC GGATCACAA- + + GTGATGAGGA G-CTGCACCT CTGTGTCTCC CGGAAGCATT TTGCCCTGGA GCGGGGCTGC + GAGAGGAGGC CACAGT-GCT ATGTGTGTCC CGCCTACGAT ATGCCAAATT TGGGGGTGTC + --GTCGAGGA T-CAGCGGGA ATGTGTGTCC AGACAGGAGT ACAGGAAGTA CGGAGGGGCC + --GTCGAGGA T-CAGCGGGA ATGTGTGTCC AGACAGGAGT ACAGGAAGTA TGGAGGGGCC + --GTTGAGGA T-CAGCGAGA ATGTGTGTCC AGACAGGAAT ACAGGAAGTA TGGAGGGGCC + + AGGCTGCGAG GGCTCTCCCC AGGAAACTAC AGTGTTCGAG TCCGGGCTAC CTCTCTGGCA + CAGCTGGCCC TGCTGCCCCC TGGAAACTAC TCCGCCAGAG TTCGGGCAAC CTCGCTGGCT + AAACTCAACC GTCTAAACCC AGGGAACTAT ACAGCCCGGA TTCAGGCTAC CTCCCTCTCT + AAACTTAACC GTCTAAACCC AGGGAACTAT ACGGCCCGGA TTCAGGCTAC CTCCCTCTCT + AAGCTAAACC GGCTAAACCC GGGGAACTAC ACAGCCCGGA TTCAGGCCAC ATCTCTCTCT + + GGAAATGGCT CCTGGACAGA ACCCACCTAT TTTTATGTGA CTGAT-TATT TAGATGTCCC + GGCAACGGCT CCTGGACAGA AAGTATCGCT TTCTACGTCC CAGGCCCA-- --GAGG---- + GGGAATGGGT CATGGACAGA TCCTGTGTTC TTCTATGTCC CCGCC-AA-- --AACGACGT + GGGAATGGGT CGTGGACAGA TCCTGTGTTC TTCTATGTCC CAGCC-AA-- --AACAACGT + GGGAATGGGT CGTGGACAGA TCCTGTGTTC TTCTATGTCC AGGCC-AA-- --AACAGGAT + + ATCAAA-TAT TGCCAAAATT ATCATTGGAC CCCTCATCTT TGTCTTCCTC TTCAGTGTTG + AGGAAGACTC CGGGGGGCTG CACGTCCTTC TCACTG---T CACCCCCGTG GGGCTCAT-- + ATGAGAACTT CATGCATCTG ATCATTGCTC TGCCGG---T TGCCATCCTG CTGATCGTTG + ATGAGAATTT CATGCATCTG ATCATTGCTC TGCCGG---T TGCCATCCTG CTGATTGTGG + ATGAAAACTT CATCCATCTG ATCATCGCTC TGCCCG---T CGCTGTCCTG TTGATCGTGG + + --TGATTGGA -AGTAT---T TATCTATTTC TGAGAAAGAG G-----CAGC CGGATGGGCC + ----GCTGTT CATCATTCTT GCCGCCCTCG GTTTCTTC-- ----TACGGC AGGAAGAG-A + GGGGGCTGGT TATCATGCTG TATGTCTTCC ATAGAAAGAG AAATAACAGC AGGTTGGG-C + GGGGCCTGGT AATCATGCTG TATGTCTTCC ATAGAAAGAG G-------G- TGTCTGGGCC + GAGGGTTGGT GATTATGCTG TACGTCTTCC ATAGAAAGAG AAATAACAGC AGGCTGGG-G + + AATGGGACCA CTGTATGCAT CTTCAAACCC TGAGTACCT- CAGTGCCAGT GATGTGTTTC + AACAG-CACC CTCTATGCCT CAGTGAATCC GGAGTACTT- CAGCGCCTCT GAT------- + AATGG-AGTG CTGTATGCTT CTGTGAACCC CGAGTATTT- CAGCGCAGCT GAT------- + AGCAG-AAGG CAGTAG---- TTGGAAA--- GGGCCATTTC CATCCTGTCT GTT------- + AATGG-AGTG CTGTATGCCT CTGTGAACCC GGAGTACTT- CAGCGCTGCT GAT------- + + CATCTTCTGT GTACGTGCCG GACGAGTGGG AGGTGCCTCG AGAGAAGATC ACCCTTCTTC + --------AT GTACATCCCT GATGAGTGGG AGGTGCCTCG GGAGCAGATC TCCATAATCC + --------GT GTACGTGCCT GATGAATGGG AGGTAGCTCG AGAGAAGATC ACCATGAACC + ---C-CTAGT GTACGTGCCT GATGAATGGG AGGTAGCTCG GGAGAAGATC ACCATGAACC + --------GT GTACGTTCCC GATGAGTGGG AGGTGGCTCG GGAGAAGATC ACCATGAGCC + + GAGAGCTGGG GCAGGGATCC TTTGGTATGG TGTATGAAGG CAATGC-CAA GGATA--TCA + GAGAGCTGGG CCAGGGCTCC TTTGGGATGG TATATGAAGG CCTGGCACAA GGACTAGAGG + GGGAGCTCGG ACAAGGGTCC TTTGGGATGG TCTATGAAGG AGTGGC-CAA GGGTG--TGG + GGGAGCTCGG ACAAGGGTCC TTCGGGATGG TCTATGAAGG AGTGGC-CAA GGGCG--TGG + GGGAACTTGG GCAGGGGTCC TTTGGGATGG TCTATGAAGG AGTTGC-CAA GGGTG--TGG + + TCAAGGGTGA GGCAGAGACC CGTGTTGCGG TTAAGACTGT CAATGAGTCA GCCAGTCTTC + CTGGAGAGGA GTCC-ACACC C--GTGGCCC TGAAGACAGT GAATGAGTTG GCCAGCCCAC + TCAAGGATGA ACCCGAAACC AGAGTGGCCA TCAAGACGGT AAACGAGGCT GCAAGTATGC + TCAAGGACGA GCCTGAAACC AGAGTGGCCA TCAAGACAGT GAATGAGGCT GCAAGTATGC + TGAAAGATGA ACCTGAAACC AGAGTGGCCA TTAAAACAGT GAACGAGGCC GCAAGCATGC + + GAGAACGGAT CGAGTTCCTC AATGAGGCAT CAGTCATGAA GGGATTCACC TGCCATCATG + GAGAACGCAT TGAGTTCCTC AAGGAAGCTT CTGTCATGAA GGCATTCAAG TGTCACCATG + GTGAAAGAAT CGAGTTTCTC AACGAGGCCT CGGTGATGAA GGAGTTCAAT TGTCACCATG + GTGAGAGAAT TGAGTTTCTC AACGAGGCCT CAGTGATGAA GGAGTTCAAC TGTCACCATG + GTGAAAGGAT TGAGTTTCTC AACGAAGCTT CTGTGATGAA GGAGTTCAAT TGTCACCATG + + TGGTCCGCCT TCTTGGGGTG GTATCCAAAG GACAGCCAAC GCTGGTAGTG ATGGAATTGA + TGGTACGTCT CCTGGGTGTT GTGTCTCAAG GCCAGCCAAC TCTGGTCATC ATGGAGTTAA + TGGTCCGGTT GCTGGGTGTG GTATCCCAAG GCCAGCCCAC CCTGGTCATC ATGGAACTAA + TGGTCCGGTT GCTGGGTGTA GTATCCCAAG GCCAGCCCAC CCTGGTCATC ATGGAACTAA + TGGTGCGATT GCTGGGTGTG GTGTCCCAAG GCCAGCCAAC ACTGGTCATC ATGGAACTGA + + TGGCTCATGG AGACCTGAAA AGTCACCTCC GTTCTCTGAG GCCAGATGCT GA---GAATA + TGACTCGTGG GGACCTCAAG AGCCATCTTC GATCTCTGCG GCCTGAGGCA GA---GAACA + TGACACGCGG TGATCTCAAA AGTTATCTCC GGTCTCTGAG GCCAGAAGTG GAGCAGAATA + TGACACGTGG CGATCTCAAA AGTTATCTCC GGTCTCTAAG GCCAGAGGTG GA---GAATA + TGACACGGGG CGATCTCAAA AGTTATCTCC GGTCTCTGAG GCCAGAAATG GA---GAATA + + ACCCAGGCCG CCCTCCCCCT ACCTTGCAAG AAATGATTCA GATGACAGCA GAAATTGCTG + ACCCTGGGCT CCCACGGCCA GCACTGGGAG ATATGATCCA GATGGCTGGT GAGATTGCAG + ATCTAGTCCT CATTCCTCCG AGCTTAAGCA AGATGATCCA GATGGCTGGA GAGATTGCAG + ATCTAGTCCT GATTCCTCCG AGCTTAAGCA AGATGATCCA GATGGCTGGA GAGATTGCAG + ATCCAGTCCT AGCACCTCCA AGCCTGAGCA AGATGATTCA GATGGCCGGA GAGATTGCAG + + ATGGCATGGC ATACTTGAAC GCCAAGAAGT TTGTGCACCG GGACCTGGCA GCTCGAAACT + ATGGCATGGC TTACCTCGCT GCCAACAAGT TTGTGCATCG AGACCTGGCA GCCAGAAACT + ATGGCATGGC CTACCTCAAT GCCAACAAGT TCGTCCACAG AGACCTTGCT GCTAGGAACT + ATGGCATGGC CTACCTCAAT GCCAACAAGT TCGTCCACAG AGACCTGGCT GCTCGGAACT + ACGGCATGGC ATACCTCAAC GCCAATAAGT TCGTCCACAG AGACCTTGCT GCCCGGAATT + + GCATGGTTGC CCATGATTTT ACTGTCAAAA TTGGAGACTT TGGAATGACA AGGGACATCT + GCATGGTGTC CCAGGACTTC ACCGTCAAGA TTGGGGACTT CGGGATGACT CGAGACGTGT + GCATGGTAGC CGAAGATTTC ACAGTCAAAA TTGGAGATTT CGGTATGACA CGAGACATCT + GCATGGTAGC TGAAGATTTC ACAGTCAAAA TTGGAGATTT TGGTATGACA CGAGACATCT + GCATGGTAGC CGAAGATTTC ACAGTCAAAA TCGGAGATTT TGGTATGACG CGAGATATCT + + ACGAGACAGA TTACTATCGG AAAGGGGGCA AGGGACTGCT TCCTGTGAGG TGGATGTCAC + ACGAGACAGA CTATTACCGC AAGGGCGGGA AAGGGCTGCT GCCCGTGCGC TGGATGGCCC + ACGAGACGGA CTACTACCGG AAAGGCGGGA AGGGGTTGCT GCCTGTGCGC TGGATGTCTC + ACGAGACGGA CTACTACCGG AAAGGCGGGA AGGGCTTGCT GCCTGTGCGC TGGATGTCTC + ATGAGACAGA CTATTACCGG AAAGGAGGGA AAGGGCTGCT GCCCGTGCGC TGGATGTCTC + + CTGAGTCCCT GAAGGATGGA GTCTTTACTG CTTCTTCTGA TATGTGGTCC TTTGGGGTGG + CCGAGTCCCT CAAAGATGGA ATCTTCACCA CACATTCGGA TGTTTGGTCC TTCGGGGTGG + CCGAGTCCCT CAAGGATGGT GTCTTCACTA CTCATTCTGA TGTCTGGTCC TTCGGGGTCG + CCGAGTCCCT CAAGGATGGC GTCTTCACCA CTCATTCCGA TGTCTGGTCC TTTGGGGTCG + CCGAGTCCCT CAAGGATGGA GTCTTCACCA CTTACTCGGA CGTCTGGTCC TTCGGGGTCG + + TCCTTTGGGA AATCACTAGC CTGGCTGAGC AACCTTATCA AGGCCTGTCT AATGAACAGG + TGCTCTGGGA GATCGTGACC CTAGCTGAAC AGCCCTACCA GGGTTTATCC AACGAGCAGG + TCCTCTGGGA GATCGCCACG CTGGCTGAGC AGCCCTACCA GGGCTTGTCC AACGAGCAAG + TCCTCTGGGA GATCGCCACT CTGGCTGAGC AGCCGTACCA GGGCCTGTCC AACGAGCAAG + TCCTCTGGGA GATCGCCACA CTGGCCGAGC AGCCCTACCA GGGCTTGTCC AACGAGCAAG + + TGTTGAAGTT TGTCATGGAT GGAGGCTATC TGGATCCCCC TGATAACTGT CCAGAGAGAC + TGCTCAAGTT TGTCATGGAT GGTGGGGTCC TGGAGGAGCT GGAGAGCTGT CCCCTTCAGC + TTCTTCGTTT CGTCATGGAG GGTGGCCTTC TGGACAAGCC GGACAACTGC CCTGATATGC + TTCTTCGTTT CGTCATGGAG GGCGGCCTTC TGGACAAGCC GGATAACTGC CCCGATATGC + TCCTTCGCTT CGTCATGGAG GGCGGCCTTC TGGACAAGCC AGACAACTGT CCCGACATGC + + TCACTGACCT GATGCGCATG TGCTGGCAGT TCAACCCCAA GATGAGGCCA ACCTTCCTGG + TGCAAGAACT GATGAGCCGC TGCTGGCAGC AGAACCCACG CCTGCGGCCC ACCTTCACCC + TGTTTGAACT TATGCGCATG TGCTGGCAGT ATAACCCCAA GATGCGGCCC TCCTTCCTGG + TGTTTGAACT TATGCGCATG TGCTGGCAGT ACAACCCCAA GATGCGGCCC TCCTTCCTGG + TGTTTGAACT GATGCGCATG TGCTGGCAGT ATAACCCCAA GATGAGGCCT TCCTTCCTGG + + AAATCGTCAA CCTGCTCAAG GATGACCTCC ACCCCAGCTT TCCAGAAGTT TCCTTCTTCT + ACATCCTGGA CAGCATTCGG GGGGAACTGC GGCCCTCTTT CCGCCTCTTT TCCTTCTATT + AGATCATCGG CAGCATCAAG GATGAGATGG AGCCCAGCTT CCAGGAGGTC TCCTTCTACT + AGATCATCGG AAGCATCAAG GATGAGATGG AGCCCAGTTT CCAGGAGGTC TCCTTCTACT + AGATCATCAG CAGCATCAAA GAGGAGATGG AGCCTGGCTT CCGGGAGGTC TCCTTCTACT + + ACAGCGAGGA GAACAAGGCT CCTGAGAGTG AGGAGCTGGA ----GAT--- ---------G + ACAGCCCAGA GTG------- ------CCAG GGGAGCCAGG GGGCCCT--- ---------G + ACAGCGAGGA GAACAAGCCT CCCGAGCCAG AGGAGCTGGA ----GAT--- ---------G + ACAGCGAGGA GAACAAGCCT CCAGAGCCGG AGGAGCTGGA ----GATGGA GCTGGAGCTG + ACAGCGAGGA GAACAAGCTG CCCGAGCCGG AGGAGCTGGA ----CCT--- ---------G + + GAGTTTGAAG ACATGGAGAA TGTCCCGTTG GATCGTTC-- ---------- ----CTCTCA + CTGCCTAATG CC-------- ---------A AACCCAA--- ---------- CTCCCTACCA + GAGCCTGAGA ACATGGAGAG CGTCCCACTG GACCCTTCGG CCTCCTCAGC CTCCCTGCCT + GAGCCCGAGA ACATGGAGAG CGTCCCGCTG GACCCTTCGG CCTCCTCAGC CTCCCTGCCT + GAGCCAGAGA ACATGGAGAG CGTCCCCCTG GACCCCTCGG C--------- CTCCCTGCCA + + CTGTCAGAGA GAA---GAG- GCTGGGGGCC GGGAGGGA-- -GGGTCCTCA ----CTGAGC + ---------- -A-------- -------CCC CAGAAGGG-- ---GCTC--- ---------C + CTGCCTGAAA GACACTCAGG ACACAAGGCT GAGAATGGCC CGGGCCCTGG CGTGCTCGTT + CTGCCTGAAA GACACTCAGG ACACAAGGCT GAGAACGG-- ----CCCTGG CGTGCTGGTT + CTGCCCGACA GACACTCAGG ACACAAGGCC GAGAACGGCC CCGGCCCTGG GGTGCTGGTC + + ATCAAACGGA CCTATGATGA -ACACATCCC CTATACCCAC ATGAATGGGG GCAAGAAGAA + CTC------- ---------- -AGACTG-C- --ATGCCC-C A-AAATGGGG GTC------- + CTCCGCGCCA GTTTTGATGA GAGACAG-CC TTACGCTCAC ATGAACGGGG GACGCGCCAA + CTCCGTGCCA GTTTTGATGA GAGACAG-CC TTACGCTCAC ATGAATGGGG GACGCGCCAA + CTCCGCGCCA GCTTCGACGA GAGACAG-CC GTACGCACAC ATGAACGGGG GCCGCAAGAA + + CGGACGTGTC CTTACCCTGC CAAGGTCAAA CCCTTCCTAA + ---------- C--------- --AGGGC--- -----ACTGA + CGAGAGGGCC TTGCCTCTGC CCCAGTCCTC GACCTGCTGA + CGAGAGGGCC TTGCCTCTGC CCCAGTCCTC AA---CCTGC + CGAGCGGGCC TTGCCGCTGC CCCAGTCTTC GACCTGCTGA + + +