| scanpy_parameter_iterator |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:32 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_normalise_data |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:20 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_run_pca |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:36 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_find_markers |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:50 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_find_cluster |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:39 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_scale_data |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:09 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_filter_genes |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:23 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_run_umap |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:43 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_run_tsne |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:06 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_compute_graph |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:03 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_read_10x |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:19 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_find_variable_genes |
unknown |
unknown |
Wed, 15 May 2024 09:39:42 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_filter_cells |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:55 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_scanpy_scripts |
unknown |
unknown |
Wed, 15 May 2024 09:40:12 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_run_pca |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:48 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_filter_cells |
unknown |
unknown |
Sat, 02 Mar 2024 10:40:32 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_export_cellbrowser |
unknown |
unknown |
Sat, 02 Mar 2024 10:41:53 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_find_clusters |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:24 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_find_markers |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:01 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_find_variable_genes |
unknown |
unknown |
Sat, 02 Mar 2024 10:41:13 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_read10x |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:53 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_scale_data |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:19 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_run_tsne |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:58 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_create_seurat_object |
unknown |
unknown |
Wed, 03 Apr 2019 15:19:37 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_dim_plot |
unknown |
unknown |
Sat, 02 Mar 2024 10:40:27 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_normalise_data |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:30 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_seurat |
unknown |
unknown |
Sat, 02 Mar 2024 10:43:03 +0000 |
↓zip ↓gz ↓bz2 |
|
| sc3_estimate_k |
unknown |
unknown |
Wed, 03 Apr 2019 15:25:01 +0000 |
↓zip ↓gz ↓bz2 |
|
| sc3_kmeans |
unknown |
unknown |
Wed, 03 Apr 2019 15:27:08 +0000 |
↓zip ↓gz ↓bz2 |
|
| sc3_calc_consens |
unknown |
unknown |
Wed, 03 Apr 2019 15:29:09 +0000 |
↓zip ↓gz ↓bz2 |
|
| sc3_prepare |
unknown |
unknown |
Wed, 03 Apr 2019 15:30:49 +0000 |
↓zip ↓gz ↓bz2 |
|
| sc3_calc_biology |
unknown |
unknown |
Wed, 03 Apr 2019 15:32:26 +0000 |
↓zip ↓gz ↓bz2 |
|
| sc3_calc_transfs |
unknown |
unknown |
Wed, 03 Apr 2019 15:34:00 +0000 |
↓zip ↓gz ↓bz2 |
|
| sc3_calc_dists |
unknown |
unknown |
Wed, 03 Apr 2019 15:35:30 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_sc3 |
unknown |
unknown |
Wed, 03 Apr 2019 15:36:31 +0000 |
↓zip ↓gz ↓bz2 |
|
| scater_normalize |
unknown |
unknown |
Wed, 03 Apr 2019 15:38:57 +0000 |
↓zip ↓gz ↓bz2 |
|
| scater_read_10x_results |
unknown |
unknown |
Wed, 03 Apr 2019 15:40:51 +0000 |
↓zip ↓gz ↓bz2 |
|
| scater_is_outlier |
unknown |
unknown |
Wed, 03 Apr 2019 15:42:39 +0000 |
↓zip ↓gz ↓bz2 |
|
| scater_calculate_cpm |
unknown |
unknown |
Wed, 03 Apr 2019 15:44:15 +0000 |
↓zip ↓gz ↓bz2 |
|
| scater_calculate_qc_metrics |
unknown |
unknown |
Wed, 03 Apr 2019 15:46:02 +0000 |
↓zip ↓gz ↓bz2 |
|
| scater_filter |
unknown |
unknown |
Wed, 03 Apr 2019 15:47:32 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_scater |
unknown |
unknown |
Wed, 03 Apr 2019 15:47:55 +0000 |
↓zip ↓gz ↓bz2 |
|
| ucsc_cell_browser |
unknown |
unknown |
Sat, 15 Jul 2023 09:25:00 +0000 |
↓zip ↓gz ↓bz2 |
|
| dropletutils_read_10x |
unknown |
unknown |
Fri, 27 Nov 2020 13:39:58 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_dropletutils |
unknown |
unknown |
Fri, 27 Nov 2020 13:40:14 +0000 |
↓zip ↓gz ↓bz2 |
|
| retrieve_scxa |
unknown |
unknown |
Mon, 07 Sep 2020 12:53:04 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_ebi_expression_atlas |
unknown |
unknown |
Mon, 07 Sep 2020 12:53:18 +0000 |
↓zip ↓gz ↓bz2 |
|
| gtf2gene_list |
unknown |
unknown |
Mon, 19 Jul 2021 08:00:24 +0000 |
↓zip ↓gz ↓bz2 |
|
| hca_matrix_downloader |
unknown |
unknown |
Sun, 27 Dec 2020 00:00:20 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_human_cell_atlas_tools |
unknown |
unknown |
Sun, 27 Dec 2020 00:00:35 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_plot_trajectory |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:29 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_regress_variable |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:03 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_run_fdg |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:40 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_run_dpt |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:43 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_run_paga |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:59 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_plot_embed |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:32 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_run_diffmap |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:35 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_scmap |
unknown |
unknown |
Mon, 08 Jul 2024 08:53:40 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_learngraph |
unknown |
unknown |
Wed, 03 Jun 2020 18:56:11 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_preprocess |
unknown |
unknown |
Wed, 03 Jun 2020 18:56:31 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_diffexp |
unknown |
unknown |
Wed, 03 Jun 2020 18:55:05 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_plotcells |
unknown |
unknown |
Wed, 03 Jun 2020 18:57:57 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_partition |
unknown |
unknown |
Wed, 03 Jun 2020 18:55:56 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_reducedim |
unknown |
unknown |
Wed, 03 Jun 2020 18:57:23 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_ordercells |
unknown |
unknown |
Wed, 03 Jun 2020 18:56:57 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_create |
unknown |
unknown |
Wed, 03 Jun 2020 18:55:36 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_monocle3 |
unknown |
unknown |
Wed, 03 Jun 2020 18:58:14 +0000 |
↓zip ↓gz ↓bz2 |
|
| scmap_index_cell |
unknown |
unknown |
Mon, 08 Jul 2024 08:53:12 +0000 |
↓zip ↓gz ↓bz2 |
|
| scmap_index_cluster |
unknown |
unknown |
Mon, 08 Jul 2024 08:53:32 +0000 |
↓zip ↓gz ↓bz2 |
|
| scmap_scmap_cell |
unknown |
unknown |
Mon, 08 Jul 2024 08:53:18 +0000 |
↓zip ↓gz ↓bz2 |
|
| scmap_select_features |
unknown |
unknown |
Mon, 08 Jul 2024 08:53:06 +0000 |
↓zip ↓gz ↓bz2 |
|
| scmap_scmap_cluster |
unknown |
unknown |
Mon, 08 Jul 2024 08:52:59 +0000 |
↓zip ↓gz ↓bz2 |
|
| sccaf_asses |
unknown |
unknown |
Mon, 25 Nov 2019 11:28:06 +0000 |
↓zip ↓gz ↓bz2 |
|
| sccaf_asses_merger |
unknown |
unknown |
Mon, 25 Nov 2019 11:28:41 +0000 |
↓zip ↓gz ↓bz2 |
|
| run_sccaf |
unknown |
unknown |
Mon, 25 Nov 2019 11:28:58 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_sccaf |
unknown |
unknown |
Mon, 25 Nov 2019 11:29:14 +0000 |
↓zip ↓gz ↓bz2 |
|
| sceasy_convert |
unknown |
unknown |
Mon, 21 Oct 2019 16:37:29 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_sceasy |
unknown |
unknown |
Mon, 21 Oct 2019 16:37:47 +0000 |
↓zip ↓gz ↓bz2 |
|
| salmon_kallisto_mtx_to_10x |
unknown |
unknown |
Wed, 11 May 2022 12:55:40 +0000 |
↓zip ↓gz ↓bz2 |
|
| droplet_barcode_plot |
unknown |
unknown |
Tue, 24 Mar 2020 16:03:14 +0000 |
↓zip ↓gz ↓bz2 |
|
| dropletutils_empty_drops |
unknown |
unknown |
Fri, 27 Nov 2020 13:39:42 +0000 |
↓zip ↓gz ↓bz2 |
|
| anndata_ops |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:15 +0000 |
↓zip ↓gz ↓bz2 |
|
| sccaf_regress_out |
unknown |
unknown |
Mon, 25 Nov 2019 11:28:23 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_find_neighbours |
unknown |
unknown |
Sat, 02 Mar 2024 10:41:08 +0000 |
↓zip ↓gz ↓bz2 |
|
| scmap_get_std_output |
unknown |
unknown |
Mon, 08 Jul 2024 08:53:38 +0000 |
↓zip ↓gz ↓bz2 |
|
| garnett_check_markers |
unknown |
unknown |
Mon, 27 Apr 2020 15:17:54 +0000 |
↓zip ↓gz ↓bz2 |
|
| garnett_transform_markers |
unknown |
unknown |
Mon, 27 Apr 2020 15:18:45 +0000 |
↓zip ↓gz ↓bz2 |
|
| scpred_predict_labels |
unknown |
unknown |
Fri, 27 Nov 2020 13:46:06 +0000 |
↓zip ↓gz ↓bz2 |
|
| garnett_classify_cells |
unknown |
unknown |
Mon, 27 Apr 2020 15:19:09 +0000 |
↓zip ↓gz ↓bz2 |
|
| garnett_get_std_output |
unknown |
unknown |
Tue, 28 Apr 2020 15:32:08 +0000 |
↓zip ↓gz ↓bz2 |
|
| scpred_eigen_decompose |
unknown |
unknown |
Fri, 14 Aug 2020 14:59:21 +0000 |
↓zip ↓gz ↓bz2 |
|
| garnett_train_classifier |
unknown |
unknown |
Tue, 28 Apr 2020 15:33:58 +0000 |
↓zip ↓gz ↓bz2 |
|
| scpred_train_model |
unknown |
unknown |
Fri, 27 Nov 2020 13:46:23 +0000 |
↓zip ↓gz ↓bz2 |
|
| garnett_get_feature_genes |
unknown |
unknown |
Mon, 27 Apr 2020 15:20:02 +0000 |
↓zip ↓gz ↓bz2 |
|
| scpred_get_std_output |
unknown |
unknown |
Fri, 27 Nov 2020 13:45:49 +0000 |
↓zip ↓gz ↓bz2 |
|
| update_marker_file |
unknown |
unknown |
Mon, 27 Apr 2020 15:20:40 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_garnett |
unknown |
unknown |
Fri, 27 Nov 2020 13:42:25 +0000 |
↓zip ↓gz ↓bz2 |
|
| scpred_traint_test_split |
unknown |
unknown |
Fri, 14 Aug 2020 15:09:40 +0000 |
↓zip ↓gz ↓bz2 |
|
| scpred_get_feature_space |
unknown |
unknown |
Fri, 27 Nov 2020 13:45:33 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_scpred |
unknown |
unknown |
Fri, 27 Nov 2020 13:46:39 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_get_consensus_outputs |
unknown |
unknown |
Fri, 27 Nov 2020 13:38:17 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_combine_tool_outputs |
unknown |
unknown |
Fri, 27 Nov 2020 13:37:40 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_get_empirical_dist |
unknown |
unknown |
Fri, 27 Nov 2020 13:38:33 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_get_tool_perf_table |
unknown |
unknown |
Fri, 27 Nov 2020 13:38:50 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_build_cell_ontology_dict |
unknown |
unknown |
Fri, 27 Nov 2020 13:37:02 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_get_tool_pvals |
unknown |
unknown |
Fri, 27 Nov 2020 13:39:06 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_cell_types_analysis |
unknown |
unknown |
Fri, 27 Nov 2020 13:39:23 +0000 |
↓zip ↓gz ↓bz2 |
|
| scpred_preprocess_data |
unknown |
unknown |
Fri, 14 Aug 2020 14:49:35 +0000 |
↓zip ↓gz ↓bz2 |
|
| scmap_preprocess_sce |
unknown |
unknown |
Mon, 08 Jul 2024 08:53:24 +0000 |
↓zip ↓gz ↓bz2 |
|
| monocle3_topmarkers |
unknown |
unknown |
Wed, 03 Jun 2020 18:55:20 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_integrate_harmony |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:15 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_integrate_combat |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:23 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_integrate_mnn |
unknown |
unknown |
Tue, 27 Feb 2024 16:43:26 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_integrate_bbknn |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:00 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_check_labels |
unknown |
unknown |
Fri, 27 Nov 2020 13:37:21 +0000 |
↓zip ↓gz ↓bz2 |
|
| ct_downsample_cells |
unknown |
unknown |
Fri, 27 Nov 2020 13:37:59 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_plot_scrublet |
unknown |
unknown |
Tue, 27 Feb 2024 16:42:11 +0000 |
↓zip ↓gz ↓bz2 |
|
| scanpy_multiplet_scrublet |
unknown |
unknown |
Wed, 15 May 2024 09:40:10 +0000 |
↓zip ↓gz ↓bz2 |
|
| fastq_trim_poly_at |
unknown |
unknown |
Tue, 15 Feb 2022 16:38:32 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_fastq_utils |
unknown |
unknown |
Tue, 15 Feb 2022 16:39:24 +0000 |
↓zip ↓gz ↓bz2 |
|
| fastq_filter_n |
unknown |
unknown |
Tue, 15 Feb 2022 16:38:56 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_convert |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:13 +0000 |
↓zip ↓gz ↓bz2 |
|
| atlas_fastq_provider |
unknown |
unknown |
Wed, 09 Mar 2022 12:58:37 +0000 |
↓zip ↓gz ↓bz2 |
|
| fastq_quality_trimmer |
unknown |
unknown |
Fri, 11 Mar 2022 03:56:00 +0000 |
↓zip ↓gz ↓bz2 |
|
| fastq_pair |
unknown |
unknown |
Thu, 17 Mar 2022 01:46:15 +0000 |
↓zip ↓gz ↓bz2 |
|
| decoupler_pseudobulk |
unknown |
unknown |
Fri, 29 Nov 2024 11:34:16 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_decoupler |
unknown |
unknown |
Fri, 29 Nov 2024 11:34:19 +0000 |
↓zip ↓gz ↓bz2 |
|
| score_genes_aucell |
unknown |
unknown |
Fri, 29 Nov 2024 11:34:02 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_plot |
unknown |
unknown |
Sat, 02 Mar 2024 10:40:08 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_run_umap |
unknown |
unknown |
Sat, 02 Mar 2024 10:40:43 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_select_integration_features |
unknown |
unknown |
Sat, 02 Mar 2024 10:40:57 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_map_query |
unknown |
unknown |
Sat, 02 Mar 2024 10:41:23 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_hover_locator |
unknown |
unknown |
Sat, 02 Mar 2024 10:41:38 +0000 |
↓zip ↓gz ↓bz2 |
|
| seurat_integration |
unknown |
unknown |
Sat, 02 Mar 2024 10:42:39 +0000 |
↓zip ↓gz ↓bz2 |
|
| decoupler_pathway_inference |
unknown |
unknown |
Fri, 29 Nov 2024 11:34:09 +0000 |
↓zip ↓gz ↓bz2 |
|
| pyscenic_aucell |
unknown |
unknown |
Sun, 15 Sep 2024 10:13:21 +0000 |
↓zip ↓gz ↓bz2 |
|
| pyscenic_ctx |
unknown |
unknown |
Sun, 15 Sep 2024 10:13:40 +0000 |
↓zip ↓gz ↓bz2 |
|
| pyscenic_grn |
unknown |
unknown |
Sun, 15 Sep 2024 10:13:26 +0000 |
↓zip ↓gz ↓bz2 |
|
| suite_pyscenic |
unknown |
unknown |
Sun, 15 Sep 2024 10:13:43 +0000 |
↓zip ↓gz ↓bz2 |
|
| pyscenic_binarize |
unknown |
unknown |
Sun, 15 Sep 2024 10:13:34 +0000 |
↓zip ↓gz ↓bz2 |
|
