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view test-data/progeny_test.tsv @ 8:9864fd2cc1f0 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 03b4d647e2dd8a333f347d3cfbe3dd5c7b407f61
author ebi-gxa
date Wed, 30 Oct 2024 14:01:19 +0000
parents 77d680b36e23
children
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	source	target	weight	p_value
0	Androgen	TMPRSS2	11.490631	0.0
1	Androgen	NKX3-1	10.622551	2.2e-44
2	Androgen	MBOAT2	10.472733	4.6e-44
3	Androgen	KLK2	10.176186	1.94441e-40
4	Androgen	SARG	11.386852	2.79021e-40
5	EGFR	LZTFL1	-1.8738769	2.0809955e-18
6	EGFR	PHLDA2	3.5051384	2.0530624e-17
7	EGFR	DUSP6	12.6293125	6.537324e-17
8	EGFR	DUSP5	7.9430394	6.86669e-17
9	EGFR	PHLDA1	6.619626	3.4106933e-16
10	Estrogen	GREB1	17.240173	0.0
11	Estrogen	RET	10.718027	0.0
12	Estrogen	TFF1	14.430255	0.0
13	Estrogen	HEY2	11.482369	3.1e-44
14	Estrogen	RAPGEFL1	10.544896	5.2e-43
15	Hypoxia	FAM162A	8.335551	0.0
16	Hypoxia	NDRG1	22.08712	0.0
17	Hypoxia	ENO2	14.32694	0.0
18	Hypoxia	PDK1	13.120449	0.0
19	Hypoxia	ANKRD37	8.484976	0.0
20	JAK-STAT	OAS1	15.028714	1.058e-41
21	JAK-STAT	HERC6	8.769676	1.3450407e-38
22	JAK-STAT	OAS3	10.618842	1.2143582e-37
23	JAK-STAT	PLSCR1	8.481604	8.955206e-37
24	JAK-STAT	DDX60	12.198234	9.150971e-36
25	MAPK	DUSP6	16.859016	0.0
26	MAPK	SPRED2	3.5018346	0.0
27	MAPK	SPRY2	9.481585	9.19e-43
28	MAPK	ETV5	5.9887094	6.7425e-41
29	MAPK	EPHA2	6.3140125	3.7492e-40
30	NFkB	NFKB1	9.513637	0.0
31	NFkB	CXCL3	22.946114	0.0
32	NFkB	NFKB2	5.5155754	0.0
33	NFkB	NFKBIA	11.444533	0.0
34	NFkB	BCL2A1	14.416924	0.0
35	PI3K	MLANA	-9.985743	1.84e-43
36	PI3K	PMEL	-6.5903482	6.8747866e-36
37	PI3K	FAXDC2	-12.421274	3.297515e-34
38	PI3K	HSD17B8	-8.601571	9.948224e-34
39	PI3K	CTSF	-9.172143	1.0235212e-31
40	TGFb	LINC00312	4.428987	2.0074443e-17
41	TGFb	TSPAN2	5.502326	3.1451768e-16
42	TGFb	SMAD7	7.6311436	7.3087106e-16
43	TGFb	NOX4	5.913813	3.8292238e-15
44	TGFb	COL4A1	6.3374896	9.052501e-15
45	TNFa	CSF2	8.35548	0.0
46	TNFa	CXCL5	10.0813675	0.0
47	TNFa	NFKBIE	10.356205	0.0
48	TNFa	TNFAIP3	35.40072	0.0
49	TNFa	EFNA1	18.63111	0.0
50	Trail	FRMPD1	-2.2346141	9.378505e-07
51	Trail	WT1-AS	2.2251053	2.0316747e-06
52	Trail	WNT8A	-1.8469616	3.795469e-05
53	Trail	GPR18	3.240805	6.1090715e-05
54	Trail	TEC	2.0513217	6.32898e-05
55	VEGF	CRACD	-4.87119	6.7185365e-25
56	VEGF	VWA8	-3.6068044	1.4495265e-18
57	VEGF	NLGN1	-5.618075	2.6587072e-18
58	VEGF	NRG3	-5.823747	1.0848074e-16
59	VEGF	KCNK10	2.8833063	1.8129868e-16
60	WNT	BMP4	5.936831	2.511717e-10
61	WNT	SIGLEC6	2.0207362	2.347858e-09
62	WNT	NPY2R	1.3872339	8.666917e-09
63	WNT	CSF3R	1.9323153	3.0219417e-07
64	WNT	KRT23	4.1216116	5.463989e-07
65	p53	GLS2	6.452465	7.444302e-37
66	p53	MDM2	8.193488	2.1194304e-35
67	p53	ZNF79	4.020263	4.5987433e-34
68	p53	FDXR	11.994496	5.589482e-32
69	p53	LCE1B	11.813737	7.8095406e-30