# HG changeset patch
# User ebi-gxa
# Date 1606484382 0
# Node ID fa662ca7ae7f9e60f6895c3c443f2661604cdaf2
# Parent  8dd732e1339302f00490d8a82d284e113e70d80f
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"

diff -r 8dd732e13393 -r fa662ca7ae7f dropletutils-empty-drops.xml
--- a/dropletutils-empty-drops.xml	Mon Jun 29 13:05:26 2020 -0400
+++ b/dropletutils-empty-drops.xml	Fri Nov 27 13:39:42 2020 +0000
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="dropletutils_empty_drops" name="DropletUtils emptyDrops" version="@TOOL_VERSION@+galaxy1">
+<tool id="dropletutils_empty_drops" name="DropletUtils emptyDrops" version="@TOOL_VERSION@+galaxy0">
   <description>Distinguish between droplets containing cells and ambient RNA in a droplet-based single-cell RNA sequencing experiment.</description>
   <macros>
     <import>dropletutils_macros.xml</import>
@@ -30,6 +30,19 @@
     <data name="output_rdata" format="rdata" label="${tool.name} on ${on_string}: serialized SingleCellExperiment object"/>
     <data name="output_txt" format="txt" label="${tool.name} on ${on_string}: tabular output"/>
   </outputs>
+  <tests>
+    <test>
+      <param name="input" value="raw_sce.rds" />
+      <param name="lower" value="1000" />
+      <param name="niters" value="10000" />
+      <param name="testambient" value="False" />
+      <param name="ignore" value="500" />
+      <param name="retain" value="200" />
+      <param name="filter_empty" value="True" />
+      <output name="output_rdata" file="empty_filt_sce.rds" compare="sim_size" delta="1000000" />
+      <output name="output_txt" file="empty_filt.txt" compare="sim_size" delta="1000000" />
+    </test>
+  </tests>
 
   <help><![CDATA[
 ========================================================================================================================================
diff -r 8dd732e13393 -r fa662ca7ae7f dropletutils_macros.xml
--- a/dropletutils_macros.xml	Mon Jun 29 13:05:26 2020 -0400
+++ b/dropletutils_macros.xml	Fri Nov 27 13:39:42 2020 +0000
@@ -1,11 +1,11 @@
 <?xml version="1.0"?>
 <macros>
 
-  <token name="@TOOL_VERSION@">1.0.3</token>
+  <token name="@TOOL_VERSION@">1.0.4</token>
 
   <xml name="requirements">
     <requirements>
-      <requirement type="package" version="0.0.4">dropletutils-scripts</requirement>
+      <requirement type="package" version="0.0.5">dropletutils-scripts</requirement>
     </requirements>
   </xml>