# HG changeset patch
# User ebi-gxa
# Date 1586341093 14400
# Node ID 2142ecf6ff022365a35f02f78f931b4b13ad420e
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 4c3dfa7bbd82d702e7e8187c7556f3289804cb49"
diff -r 000000000000 -r 2142ecf6ff02 garnett_macros.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/garnett_macros.xml Wed Apr 08 06:18:13 2020 -0400
@@ -0,0 +1,44 @@
+
+ 0.2.8
+ More information can be found at https://cole-trapnell-lab.github.io/garnett/docs/
+ 18.01
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+
+ garnett-cli
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+
+ /dev/null | grep -v -i "WARNING: ")
+ ]]>
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+ @article{,
+ url = {https://doi.org/10.1038/s41592-019-0535-3},
+ author = {Hannah A. Pliner and Jay Shendure and Cole Trapnell},
+ title = {Supervised classification enables rapid annotation of cell atlases},
+ journal = {Nature Methods}
+ }
+
+
+ @misc{githubgarnett-cli.git,
+ author = {Andrey Solovyev, EBI Gene Expression Team},
+ year = {2019},
+ title = {garnett-cli: command line interface for Garnett tool},
+ publisher = {GitHub},
+ journal = {GitHub repository},
+ url = {https://github.com/ebi-gene-expression-group/garnett-cli.git},
+ }
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diff -r 000000000000 -r 2142ecf6ff02 garnett_transform_markers.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/garnett_transform_markers.xml Wed Apr 08 06:18:13 2020 -0400
@@ -0,0 +1,35 @@
+
+ Transform marker files from Single Cell Expression Atlas format to that compatible with Garnett
+
+ garnett_macros.xml
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