# HG changeset patch
# User ebi-gxa
# Date 1589491022 14400
# Node ID d333006ef72a3517e1eaa065903551158751ea2e
# Parent  c5665e286bcf809bcb7153b9e38ec316909cea3e
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit c388aa3bb719eff471508b6f01cae8583ee7bb1d"

diff -r c5665e286bcf -r d333006ef72a monocle3-diffExp.xml
--- a/monocle3-diffExp.xml	Tue Apr 28 11:50:06 2020 -0400
+++ b/monocle3-diffExp.xml	Thu May 14 17:17:02 2020 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="monocle3_diffExp" name="Monocle3 diffExp" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
+<tool id="monocle3_diffExp" name="Monocle3 diffExp" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
   <description> of genes along a trajectory</description>
   <macros>
     <import>monocle3-macros.xml</import>
@@ -14,6 +14,7 @@
 #end if
     --method '$(method)'
     --alternative '$(alternative)'
+    --cores \${GALAXY_SLOTS:-1}
 
     @INPUT_OPTS@
     output.tsv
diff -r c5665e286bcf -r d333006ef72a monocle3-macros.xml
--- a/monocle3-macros.xml	Tue Apr 28 11:50:06 2020 -0400
+++ b/monocle3-macros.xml	Thu May 14 17:17:02 2020 -0400
@@ -4,6 +4,7 @@
   <token name="@HELP@">More information can be found at https://cole-trapnell-lab.github.io/monocle3/ and https://github.com/ebi-gene-expression-group/monocle-scripts</token>
   <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
+0.1.5+galaxy0: Updated to monocle3-cli 0.0.8 to add top marker genes and fix container plots for plotCells (only those two modules upgraded).
 
 0.1.4+galaxy0: Updated to monocle3-cli 0.0.7 to fix bug with column headers in tsv.