Mercurial > repos > ebi-gxa > scanpy_filter_genes

diff scanpy-filter-genes.xml @ 15:fc5b3e76131b draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 62f47287c7e8449c59a1f1f454852ddc669b1b1e-dirty"
author ebi-gxa
date Mon, 07 Sep 2020 13:15:42 +0000
parents c678f671e151
children d82d999fa716
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--- a/scanpy-filter-genes.xml	Fri Jun 05 08:58:03 2020 -0400
+++ b/scanpy-filter-genes.xml	Mon Sep 07 13:15:42 2020 +0000
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_filter_genes" name="Scanpy FilterGenes" version="@TOOL_VERSION@+galaxy10" profile="@PROFILE@">
+<tool id="scanpy_filter_genes" name="Scanpy FilterGenes" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
   <description>based on counts and numbers of cells expressed</description>
   <macros>
     <import>scanpy_macros2.xml</import>
@@ -72,7 +72,7 @@
       <param name="output_format" value="anndata"/>
       <repeat name="parameters">
         <param name="name" value="n_cells"/>
-        <param name="min" value="3"/>
+        <param name="min" value="20"/>
         <param name="max" value="1e9"/>
       </repeat>
       <repeat name="parameters">