# HG changeset patch
# User ebi-gxa
# Date 1599484501 0
# Node ID 83db723bc0e1920198b9621edb3e342e9c8cdc2f
# Parent  ea8fd43b7e1e0da2b6c767f28ac2fccd28515621
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 62f47287c7e8449c59a1f1f454852ddc669b1b1e-dirty"

diff -r ea8fd43b7e1e -r 83db723bc0e1 scanpy-scale-data.xml
--- a/scanpy-scale-data.xml	Fri Jun 05 09:09:57 2020 -0400
+++ b/scanpy-scale-data.xml	Mon Sep 07 13:15:01 2020 +0000
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_scale_data" name="Scanpy ScaleData" version="@TOOL_VERSION@+galaxy10" profile="@PROFILE@">
+<tool id="scanpy_scale_data" name="Scanpy ScaleData" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
   <description>to make expression variance the same for all genes</description>
   <macros>
     <import>scanpy_macros2.xml</import>
diff -r ea8fd43b7e1e -r 83db723bc0e1 scanpy_macros2.xml
--- a/scanpy_macros2.xml	Fri Jun 05 09:09:57 2020 -0400
+++ b/scanpy_macros2.xml	Mon Sep 07 13:15:01 2020 +0000
@@ -1,10 +1,13 @@
 <macros>
-  <token name="@TOOL_VERSION@">1.4.3</token>
+  <token name="@TOOL_VERSION@">1.6.0</token>
   <token name="@HELP@">More information can be found at https://scanpy.readthedocs.io</token>
   <token name="@PROFILE@">18.01</token>
   <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
 
+1.6.0+galaxy0: Update to scanpy-scripts 0.2.13 (running scanpy ==1.6.0) to incorporate new options, code simplifications, and batch integration methods. Jonathan Manning, Expression Atlas team https://www.ebi.ac.uk/gxa/home  at
+EMBL-EBI https://www.ebi.ac.uk/
+
 1.4.3+galaxy10: Update to scanpy-scripts 0.2.10 (running scanpy ==1.4.3) to address bugfixes in run-pca.
 
 1.4.3+galaxy10: Update to scanpy-scripts 0.2.9 (running scanpy ==1.4.3) to address bugfixes in find-variable-genes.
@@ -46,7 +49,7 @@
 
   <xml name="requirements">
     <requirements>
-      <requirement type="package" version="0.2.10">scanpy-scripts</requirement>
+      <requirement type="package" version="0.3.0">scanpy-scripts</requirement>
       <yield/>
     </requirements>
   </xml>