Mercurial > repos > ebi-gxa > seurat_scale_data
diff seurat_scale_data.xml @ 4:4147dc085d45 draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author | ebi-gxa |
---|---|
date | Fri, 27 Nov 2020 13:49:56 +0000 |
parents | 1a8e93921f01 |
children | d2f6eac0ad42 |
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--- a/seurat_scale_data.xml Sat Jul 11 08:43:24 2020 -0400 +++ b/seurat_scale_data.xml Fri Nov 27 13:49:56 2020 +0000 @@ -70,8 +70,10 @@ <tests> <test> - <param name="input" ftype="rdata" value="out_findvar.rds"/> - <output name="rds_seurat_file" ftype="rdata" value="out_scale.rds" compare="sim_size"/> + <param name="rds_seurat_file" ftype="rdata" value="variable_genes_seurat.rds"/> + <param name="vars_to_regress" value="nCount_RNA" /> + <param name="use_umi" value="True" /> + <output name="rds_seurat_file" ftype="rdata" value="scaled_seurat.rds" compare="sim_size" delta="1000000000" /> </test> </tests> <help><![CDATA[